Query 037418
Match_columns 427
No_of_seqs 162 out of 1312
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 12:01:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037418.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037418hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 4.3E-68 9.3E-73 552.2 27.4 414 3-426 47-491 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.7E-68 3.7E-73 531.2 23.3 372 3-426 31-427 (498)
3 PRK15462 dipeptide/tripeptide 100.0 9.7E-52 2.1E-56 423.8 30.1 372 3-426 19-410 (493)
4 TIGR00926 2A1704 Peptide:H+ sy 100.0 8.4E-51 1.8E-55 429.8 29.1 327 7-374 1-344 (654)
5 PRK10207 dipeptide/tripeptide 100.0 1.3E-46 2.9E-51 389.6 30.9 371 3-426 24-412 (489)
6 TIGR00924 yjdL_sub1_fam amino 100.0 3.5E-45 7.6E-50 378.2 29.8 375 3-426 20-414 (475)
7 PF00854 PTR2: POT family; In 100.0 8.5E-45 1.9E-49 364.2 14.3 343 59-426 1-361 (372)
8 PRK09584 tppB putative tripept 100.0 5.2E-42 1.1E-46 356.6 30.0 369 3-426 31-415 (500)
9 PRK10054 putative transporter; 99.6 3.1E-13 6.8E-18 136.7 23.3 156 3-172 17-177 (395)
10 PRK11646 multidrug resistance 99.5 2.7E-12 5.8E-17 130.1 25.7 156 4-173 21-181 (400)
11 PF07690 MFS_1: Major Facilita 99.5 5.6E-13 1.2E-17 130.9 19.4 153 5-173 8-168 (352)
12 TIGR00900 2A0121 H+ Antiporter 99.5 1.1E-11 2.4E-16 122.1 24.3 156 7-174 13-176 (365)
13 TIGR00711 efflux_EmrB drug res 99.4 9.6E-11 2.1E-15 121.0 26.6 146 14-173 23-173 (485)
14 cd06174 MFS The Major Facilita 99.4 4.9E-11 1.1E-15 116.5 23.1 157 3-174 9-171 (352)
15 TIGR00710 efflux_Bcr_CflA drug 99.4 4.4E-11 9.5E-16 119.3 23.1 146 16-175 28-178 (385)
16 TIGR00899 2A0120 sugar efflux 99.4 1.1E-10 2.5E-15 116.0 26.0 158 3-174 7-173 (375)
17 PRK03545 putative arabinose tr 99.4 7.3E-11 1.6E-15 118.9 24.0 143 16-172 32-179 (390)
18 PRK09528 lacY galactoside perm 99.4 7.3E-11 1.6E-15 120.1 23.5 164 2-174 19-188 (420)
19 TIGR00893 2A0114 d-galactonate 99.4 1.3E-10 2.9E-15 115.2 23.1 147 14-174 15-166 (399)
20 PRK11551 putative 3-hydroxyphe 99.4 1.7E-10 3.8E-15 116.4 23.6 155 4-172 26-185 (406)
21 TIGR00891 2A0112 putative sial 99.4 2.8E-10 6.1E-15 114.1 24.9 154 3-170 22-182 (405)
22 TIGR00895 2A0115 benzoate tran 99.4 3.4E-10 7.3E-15 112.9 25.3 145 14-172 38-187 (398)
23 PRK09874 drug efflux system pr 99.4 2.9E-10 6.2E-15 114.7 24.9 153 5-173 26-189 (408)
24 PRK14995 methyl viologen resis 99.3 3E-10 6.6E-15 118.4 25.4 143 16-173 29-178 (495)
25 TIGR00901 2A0125 AmpG-related 99.3 5.4E-10 1.2E-14 110.9 25.5 145 16-174 11-175 (356)
26 TIGR00882 2A0105 oligosacchari 99.3 5.9E-10 1.3E-14 112.5 25.9 152 9-172 18-178 (396)
27 PRK15402 multidrug efflux syst 99.3 4.8E-10 1E-14 113.5 25.0 142 18-173 38-184 (406)
28 PRK10504 putative transporter; 99.3 9.3E-10 2E-14 113.6 26.7 158 3-175 20-183 (471)
29 PRK11128 putative 3-phenylprop 99.3 5.8E-10 1.3E-14 112.1 24.2 140 14-170 26-172 (382)
30 PRK12382 putative transporter; 99.3 1.3E-09 2.9E-14 109.6 25.8 141 14-165 37-187 (392)
31 PRK05122 major facilitator sup 99.3 9.5E-10 2.1E-14 110.9 24.5 143 14-166 37-188 (399)
32 TIGR00881 2A0104 phosphoglycer 99.3 4.9E-10 1.1E-14 110.9 22.1 147 14-174 16-168 (379)
33 PRK11102 bicyclomycin/multidru 99.3 5.9E-10 1.3E-14 111.2 22.3 141 19-173 17-162 (377)
34 PRK10213 nepI ribonucleoside t 99.3 1.4E-09 3E-14 110.0 24.4 138 19-170 46-188 (394)
35 PRK03699 putative transporter; 99.3 3E-09 6.4E-14 107.4 26.5 153 5-173 19-179 (394)
36 PRK12307 putative sialic acid 99.3 1.1E-09 2.5E-14 111.2 23.2 147 5-165 30-181 (426)
37 PRK11652 emrD multidrug resist 99.2 1.8E-09 3.9E-14 108.8 23.5 141 16-170 31-176 (394)
38 TIGR00886 2A0108 nitrite extru 99.2 1.8E-09 3.9E-14 107.1 23.1 145 7-166 15-177 (366)
39 TIGR00890 2A0111 Oxalate/Forma 99.2 8.6E-10 1.9E-14 109.0 20.4 146 13-173 23-173 (377)
40 PRK11195 lysophospholipid tran 99.2 5.7E-09 1.2E-13 105.5 25.9 136 17-169 27-166 (393)
41 PRK10489 enterobactin exporter 99.2 1.9E-09 4.1E-14 109.6 22.4 157 3-173 24-193 (417)
42 PRK10406 alpha-ketoglutarate t 99.2 8.1E-09 1.8E-13 105.6 26.2 156 4-169 33-211 (432)
43 PRK10473 multidrug efflux syst 99.2 4.1E-09 8.9E-14 106.1 23.5 143 17-173 27-174 (392)
44 PRK15403 multidrug efflux syst 99.2 9.4E-09 2E-13 104.7 26.2 154 3-172 17-186 (413)
45 PRK09848 glucuronide transport 99.2 5.2E-09 1.1E-13 107.6 24.0 131 14-152 30-174 (448)
46 PRK11043 putative transporter; 99.2 7.9E-09 1.7E-13 104.3 24.9 141 19-173 32-177 (401)
47 TIGR00902 2A0127 phenyl propri 99.2 8.6E-09 1.9E-13 103.6 24.7 135 14-167 26-169 (382)
48 TIGR00792 gph sugar (Glycoside 99.2 3.8E-09 8.1E-14 107.7 22.3 160 6-173 12-190 (437)
49 PRK10091 MFS transport protein 99.2 4.7E-09 1E-13 105.5 22.6 144 15-172 25-173 (382)
50 PRK15011 sugar efflux transpor 99.2 1.4E-08 2.9E-13 102.6 25.7 152 4-173 26-190 (393)
51 TIGR00896 CynX cyanate transpo 99.2 5.9E-09 1.3E-13 103.5 22.3 139 14-169 21-167 (355)
52 TIGR00898 2A0119 cation transp 99.1 6.5E-09 1.4E-13 108.3 22.8 139 19-173 115-260 (505)
53 PRK03633 putative MFS family t 99.1 1.8E-08 4E-13 101.1 25.3 135 4-153 17-154 (381)
54 PRK10133 L-fucose transporter; 99.1 1.1E-08 2.4E-13 105.1 23.8 138 3-149 36-173 (438)
55 TIGR00885 fucP L-fucose:H+ sym 99.1 2.8E-08 6.1E-13 101.2 26.6 133 11-152 20-153 (410)
56 PRK08633 2-acyl-glycerophospho 99.1 1E-08 2.2E-13 117.3 25.3 135 7-153 23-163 (1146)
57 TIGR00883 2A0106 metabolite-pr 99.1 2.7E-08 6E-13 98.9 25.2 159 3-171 3-185 (394)
58 TIGR00879 SP MFS transporter, 99.1 2.2E-08 4.8E-13 102.1 24.9 136 25-173 68-213 (481)
59 TIGR00894 2A0114euk Na(+)-depe 99.1 1.1E-08 2.4E-13 105.5 22.3 140 22-173 70-215 (465)
60 TIGR00903 2A0129 major facilit 99.1 4.1E-08 9E-13 98.5 25.8 147 8-170 6-158 (368)
61 PRK06814 acylglycerophosphoeth 99.1 8.6E-09 1.9E-13 117.9 23.5 125 30-169 54-187 (1140)
62 PRK03893 putative sialic acid 99.1 1.9E-08 4.1E-13 104.4 23.8 146 7-166 34-184 (496)
63 PF05977 MFS_3: Transmembrane 99.1 1.9E-08 4E-13 105.3 23.4 161 2-175 16-188 (524)
64 KOG1330 Sugar transporter/spin 99.1 4.2E-11 9.1E-16 119.4 3.4 140 22-175 62-208 (493)
65 PRK09705 cynX putative cyanate 99.1 1.8E-08 3.8E-13 101.9 22.3 137 16-169 32-176 (393)
66 TIGR02332 HpaX 4-hydroxyphenyl 99.1 4.7E-08 1E-12 99.5 24.8 144 14-173 29-185 (412)
67 PLN00028 nitrate transmembrane 99.1 3.6E-08 7.8E-13 102.3 23.9 154 4-172 47-214 (476)
68 TIGR01299 synapt_SV2 synaptic 99.1 8.8E-08 1.9E-12 103.9 27.1 144 14-173 188-351 (742)
69 TIGR01301 GPH_sucrose GPH fami 99.1 5.9E-08 1.3E-12 100.1 24.6 161 10-178 20-219 (477)
70 TIGR00892 2A0113 monocarboxyla 99.1 2.8E-08 6E-13 102.5 22.4 145 16-175 42-192 (455)
71 PRK10077 xylE D-xylose transpo 99.0 6.3E-08 1.4E-12 100.0 24.6 141 23-173 50-211 (479)
72 TIGR00889 2A0110 nucleoside tr 99.0 6.2E-08 1.3E-12 98.9 23.4 152 8-170 16-173 (418)
73 PRK11663 regulatory protein Uh 99.0 5.9E-08 1.3E-12 99.4 22.9 140 17-170 47-191 (434)
74 PRK11273 glpT sn-glycerol-3-ph 99.0 2.7E-07 5.9E-12 95.0 25.6 144 15-171 51-202 (452)
75 TIGR00897 2A0118 polyol permea 98.9 8E-07 1.7E-11 90.0 27.9 133 14-160 35-176 (402)
76 PRK09669 putative symporter Ya 98.9 1.3E-07 2.8E-12 97.1 22.3 149 14-170 31-197 (444)
77 PRK09556 uhpT sugar phosphate 98.9 7.4E-08 1.6E-12 99.6 19.7 143 16-170 52-205 (467)
78 TIGR00926 2A1704 Peptide:H+ sy 98.9 5.1E-08 1.1E-12 104.3 18.4 312 23-377 15-344 (654)
79 PRK10429 melibiose:sodium symp 98.9 2.8E-07 6E-12 95.6 23.5 127 14-148 28-162 (473)
80 PRK09952 shikimate transporter 98.9 1.6E-06 3.5E-11 89.0 28.8 117 43-167 79-210 (438)
81 TIGR00712 glpT glycerol-3-phos 98.9 5.6E-07 1.2E-11 92.2 24.2 146 15-173 49-202 (438)
82 PRK10642 proline/glycine betai 98.9 1.2E-06 2.7E-11 91.2 26.7 156 4-167 27-203 (490)
83 PRK15075 citrate-proton sympor 98.8 1.8E-06 4E-11 88.3 26.6 143 14-164 36-199 (434)
84 PRK11902 ampG muropeptide tran 98.8 2E-06 4.3E-11 87.1 25.3 156 2-172 8-177 (402)
85 KOG2532 Permease of the major 98.8 6.6E-07 1.4E-11 92.3 20.6 139 22-175 67-214 (466)
86 PF13347 MFS_2: MFS/sugar tran 98.8 3.8E-07 8.3E-12 93.2 18.9 302 14-423 23-345 (428)
87 PRK11010 ampG muropeptide tran 98.7 4.1E-06 8.9E-11 87.4 25.0 154 4-172 23-190 (491)
88 COG2271 UhpC Sugar phosphate p 98.7 9.5E-07 2.1E-11 87.8 16.9 153 8-176 40-206 (448)
89 PRK05122 major facilitator sup 98.6 4.9E-07 1.1E-11 91.1 13.8 157 7-180 230-392 (399)
90 TIGR00890 2A0111 Oxalate/Forma 98.6 4.7E-07 1E-11 89.4 13.4 142 14-170 227-375 (377)
91 cd06174 MFS The Major Facilita 98.6 7.5E-07 1.6E-11 86.8 14.5 155 6-174 188-349 (352)
92 PF01306 LacY_symp: LacY proto 98.6 9.9E-07 2.1E-11 88.9 15.3 154 10-174 23-185 (412)
93 PRK03699 putative transporter; 98.6 3.5E-07 7.5E-12 92.3 12.1 153 6-171 218-374 (394)
94 TIGR00899 2A0120 sugar efflux 98.6 6.4E-07 1.4E-11 89.0 13.2 146 14-174 221-371 (375)
95 PRK15011 sugar efflux transpor 98.6 1E-06 2.2E-11 89.0 13.9 149 14-175 238-389 (393)
96 PRK09705 cynX putative cyanate 98.6 1.4E-06 3.1E-11 88.0 14.9 156 5-175 217-379 (393)
97 TIGR00805 oat sodium-independe 98.5 1.4E-06 3.1E-11 93.5 15.3 151 14-174 54-278 (633)
98 PRK09952 shikimate transporter 98.5 1.8E-06 4E-11 88.5 15.4 162 3-175 260-431 (438)
99 COG2814 AraJ Arabinose efflux 98.5 3E-05 6.5E-10 77.6 23.3 140 20-175 40-186 (394)
100 TIGR00893 2A0114 d-galactonate 98.5 2.1E-06 4.6E-11 84.9 15.3 154 6-174 228-396 (399)
101 TIGR00806 rfc RFC reduced fola 98.5 7.1E-07 1.5E-11 91.0 11.8 144 14-172 47-198 (511)
102 PRK03633 putative MFS family t 98.5 2.2E-06 4.8E-11 86.0 15.0 142 14-173 222-368 (381)
103 PRK10642 proline/glycine betai 98.5 3.8E-06 8.2E-11 87.5 15.6 138 4-153 261-402 (490)
104 PRK11462 putative transporter; 98.4 0.00011 2.3E-09 76.2 25.7 129 14-148 31-165 (460)
105 TIGR00880 2_A_01_02 Multidrug 98.4 1.2E-06 2.6E-11 73.4 9.1 124 37-174 7-135 (141)
106 PRK09874 drug efflux system pr 98.4 1.9E-06 4.1E-11 86.8 12.1 147 14-175 241-396 (408)
107 PRK11663 regulatory protein Uh 98.4 3.3E-06 7.1E-11 86.5 13.8 155 7-175 257-422 (434)
108 TIGR00883 2A0106 metabolite-pr 98.4 1.5E-06 3.2E-11 86.4 10.9 151 3-164 229-388 (394)
109 TIGR00887 2A0109 phosphate:H+ 98.4 6.1E-06 1.3E-10 86.2 15.8 138 24-171 52-219 (502)
110 TIGR00891 2A0112 putative sial 98.4 2E-06 4.3E-11 86.1 11.3 135 14-162 260-401 (405)
111 PRK03545 putative arabinose tr 98.4 6.9E-06 1.5E-10 82.6 15.2 155 7-176 219-379 (390)
112 PRK03893 putative sialic acid 98.4 3.9E-06 8.5E-11 87.1 13.1 141 12-166 294-442 (496)
113 TIGR00892 2A0113 monocarboxyla 98.4 3.6E-06 7.9E-11 86.8 12.6 155 8-176 256-420 (455)
114 PRK10489 enterobactin exporter 98.4 5E-06 1.1E-10 84.4 13.4 151 10-174 240-396 (417)
115 PRK11551 putative 3-hydroxyphe 98.4 8E-06 1.7E-10 82.4 14.6 144 14-172 242-391 (406)
116 PRK09556 uhpT sugar phosphate 98.3 5E-06 1.1E-10 86.0 12.2 154 8-175 273-447 (467)
117 TIGR00879 SP MFS transporter, 98.3 7.2E-06 1.6E-10 83.5 13.1 149 16-174 307-467 (481)
118 PRK12382 putative transporter; 98.3 5.5E-06 1.2E-10 83.3 11.8 151 8-175 231-387 (392)
119 TIGR01272 gluP glucose/galacto 98.3 6.2E-06 1.3E-10 80.8 11.8 139 14-167 162-305 (310)
120 TIGR00788 fbt folate/biopterin 98.3 5.3E-06 1.1E-10 86.0 11.9 160 2-172 35-204 (468)
121 TIGR02718 sider_RhtX_FptX side 98.3 0.00039 8.6E-09 69.9 25.0 158 2-174 10-181 (390)
122 KOG3764 Vesicular amine transp 98.3 2.9E-06 6.3E-11 83.7 8.8 160 22-194 100-267 (464)
123 COG0738 FucP Fucose permease [ 98.3 2.7E-05 5.9E-10 77.2 15.2 130 14-152 34-163 (422)
124 COG2211 MelB Na+/melibiose sym 98.3 0.00013 2.8E-09 74.6 20.7 131 14-152 34-172 (467)
125 TIGR00889 2A0110 nucleoside tr 98.2 1.3E-05 2.9E-10 81.7 13.5 136 28-175 251-400 (418)
126 PRK09528 lacY galactoside perm 98.2 7.8E-06 1.7E-10 83.2 11.6 147 14-174 245-400 (420)
127 PRK15075 citrate-proton sympor 98.2 1.7E-05 3.7E-10 81.1 13.9 136 5-153 250-392 (434)
128 PF05631 DUF791: Protein of un 98.2 2.6E-05 5.6E-10 76.6 14.1 152 17-178 58-217 (354)
129 PTZ00207 hypothetical protein; 98.2 1.6E-05 3.5E-10 84.1 13.1 145 10-166 44-194 (591)
130 PLN00028 nitrate transmembrane 98.2 2.8E-05 6.2E-10 80.7 14.8 153 10-177 269-433 (476)
131 PF11700 ATG22: Vacuole efflux 98.2 3.2E-05 6.9E-10 80.2 15.0 158 8-175 296-466 (477)
132 PRK11010 ampG muropeptide tran 98.2 2.9E-05 6.2E-10 81.1 14.8 159 8-177 237-403 (491)
133 PRK10406 alpha-ketoglutarate t 98.2 1.5E-05 3.3E-10 81.4 12.0 158 6-174 256-421 (432)
134 TIGR00792 gph sugar (Glycoside 98.2 1.2E-05 2.6E-10 81.8 11.1 161 7-174 236-417 (437)
135 TIGR00897 2A0118 polyol permea 98.1 5.2E-05 1.1E-09 76.8 15.2 156 4-174 233-398 (402)
136 TIGR01299 synapt_SV2 synaptic 98.1 1E-05 2.2E-10 88.0 10.4 125 36-174 603-731 (742)
137 TIGR00902 2A0127 phenyl propri 98.1 4.8E-05 1E-09 76.5 14.8 153 7-173 219-375 (382)
138 PRK10077 xylE D-xylose transpo 98.1 4.3E-05 9.3E-10 78.9 14.6 144 18-173 296-453 (479)
139 PRK10091 MFS transport protein 98.1 3.2E-05 6.9E-10 77.7 13.1 148 15-174 222-373 (382)
140 KOG0255 Synaptic vesicle trans 98.1 2.4E-05 5.1E-10 82.1 12.5 137 22-172 112-250 (521)
141 PF06609 TRI12: Fungal trichot 98.1 0.00097 2.1E-08 70.6 24.4 144 17-175 68-215 (599)
142 COG2814 AraJ Arabinose efflux 98.1 7.9E-05 1.7E-09 74.6 15.0 152 15-180 234-389 (394)
143 PF03825 Nuc_H_symport: Nucleo 98.1 0.0014 3E-08 66.6 24.2 105 7-116 15-121 (400)
144 COG2223 NarK Nitrate/nitrite t 98.1 0.00068 1.5E-08 67.7 20.5 153 11-177 31-193 (417)
145 PRK15034 nitrate/nitrite trans 98.1 8.4E-05 1.8E-09 76.5 14.6 124 14-150 55-184 (462)
146 PF13347 MFS_2: MFS/sugar tran 98.1 3.9E-05 8.4E-10 78.4 12.2 140 4-152 236-381 (428)
147 TIGR00711 efflux_EmrB drug res 98.0 4.4E-05 9.4E-10 78.8 12.5 137 6-152 268-407 (485)
148 PRK11273 glpT sn-glycerol-3-ph 98.0 5.4E-05 1.2E-09 78.0 12.8 155 7-174 267-432 (452)
149 KOG0254 Predicted transporter 98.0 4E-05 8.6E-10 80.4 11.8 124 29-166 90-219 (513)
150 COG2271 UhpC Sugar phosphate p 98.0 6.7E-05 1.5E-09 74.9 12.5 154 10-174 269-431 (448)
151 PRK11102 bicyclomycin/multidru 98.0 0.00015 3.2E-09 72.2 15.2 150 17-175 219-370 (377)
152 COG2223 NarK Nitrate/nitrite t 98.0 5.8E-05 1.2E-09 75.3 11.6 158 8-174 233-398 (417)
153 PRK10133 L-fucose transporter; 98.0 5.9E-05 1.3E-09 77.5 12.3 142 14-172 280-428 (438)
154 TIGR02718 sider_RhtX_FptX side 98.0 0.00011 2.4E-09 73.9 13.8 156 6-171 221-385 (390)
155 TIGR02332 HpaX 4-hydroxyphenyl 98.0 0.00011 2.3E-09 74.9 13.5 149 3-165 252-409 (412)
156 KOG0569 Permease of the major 98.0 0.00036 7.8E-09 71.9 17.0 134 31-174 63-202 (485)
157 TIGR00895 2A0115 benzoate tran 98.0 8.1E-05 1.8E-09 74.0 12.2 132 7-152 264-397 (398)
158 PRK10504 putative transporter; 98.0 0.00014 3.1E-09 74.9 14.4 136 6-152 274-412 (471)
159 PRK14995 methyl viologen resis 97.9 7.6E-05 1.7E-09 77.9 12.3 138 6-152 272-410 (495)
160 PRK15402 multidrug efflux syst 97.9 0.0003 6.4E-09 71.1 16.0 130 14-153 237-368 (406)
161 KOG4686 Predicted sugar transp 97.9 4.7E-05 1E-09 72.1 9.0 140 16-171 288-436 (459)
162 TIGR00900 2A0121 H+ Antiporter 97.9 9.7E-05 2.1E-09 72.6 11.9 133 7-152 224-360 (365)
163 TIGR00712 glpT glycerol-3-phos 97.9 5.8E-05 1.3E-09 77.4 10.4 152 8-175 266-431 (438)
164 PRK11902 ampG muropeptide tran 97.9 0.00028 6.1E-09 71.3 15.2 145 17-178 234-391 (402)
165 PRK11128 putative 3-phenylprop 97.9 0.0002 4.3E-09 71.9 13.9 148 8-169 220-371 (382)
166 TIGR00881 2A0104 phosphoglycer 97.9 6.5E-05 1.4E-09 74.1 10.2 140 9-159 232-379 (379)
167 TIGR00710 efflux_Bcr_CflA drug 97.9 0.00025 5.4E-09 70.5 14.2 106 9-116 222-330 (385)
168 PRK12307 putative sialic acid 97.9 0.00021 4.6E-09 72.5 13.6 124 14-153 253-381 (426)
169 PRK10054 putative transporter; 97.9 0.00011 2.3E-09 74.4 11.3 148 14-174 228-381 (395)
170 PRK09848 glucuronide transport 97.8 0.00014 3.1E-09 74.6 11.7 158 9-174 244-425 (448)
171 PRK11195 lysophospholipid tran 97.8 0.00025 5.4E-09 71.7 13.2 144 14-172 227-375 (393)
172 TIGR00894 2A0114euk Na(+)-depe 97.8 0.00056 1.2E-08 70.5 16.1 157 5-175 273-448 (465)
173 PRK08633 2-acyl-glycerophospho 97.8 0.00017 3.6E-09 82.8 13.0 137 14-164 254-397 (1146)
174 TIGR00896 CynX cyanate transpo 97.8 0.00019 4.1E-09 71.1 11.7 134 6-153 210-346 (355)
175 PRK09669 putative symporter Ya 97.8 0.00024 5.2E-09 72.9 12.2 112 33-152 269-385 (444)
176 PF07690 MFS_1: Major Facilita 97.8 0.00025 5.4E-09 69.3 11.6 128 7-146 220-352 (352)
177 PRK10213 nepI ribonucleoside t 97.8 0.00065 1.4E-08 68.7 14.8 147 7-169 230-383 (394)
178 PRK15034 nitrate/nitrite trans 97.7 0.00051 1.1E-08 70.8 14.1 163 9-175 268-452 (462)
179 TIGR00901 2A0125 AmpG-related 97.7 0.00021 4.5E-09 70.8 10.1 113 5-119 221-342 (356)
180 TIGR00882 2A0105 oligosacchari 97.7 0.00028 6E-09 71.1 10.8 146 15-172 238-390 (396)
181 KOG2533 Permease of the major 97.7 0.0016 3.4E-08 67.8 16.5 138 23-173 76-223 (495)
182 COG2807 CynX Cyanate permease 97.6 0.0011 2.3E-08 65.3 12.7 148 15-176 34-185 (395)
183 TIGR00887 2A0109 phosphate:H+ 97.6 0.00062 1.3E-08 71.1 12.0 155 6-171 301-483 (502)
184 PRK10473 multidrug efflux syst 97.5 0.0025 5.4E-08 64.0 14.9 54 17-71 228-281 (392)
185 PRK11646 multidrug resistance 97.5 0.00093 2E-08 67.7 11.7 145 14-172 230-383 (400)
186 PRK10429 melibiose:sodium symp 97.5 0.00059 1.3E-08 70.8 10.3 152 18-174 257-430 (473)
187 PRK06814 acylglycerophosphoeth 97.5 0.0009 2E-08 76.9 12.3 151 7-165 239-410 (1140)
188 TIGR01272 gluP glucose/galacto 97.4 0.0051 1.1E-07 60.2 15.6 60 84-152 8-69 (310)
189 KOG2615 Permease of the major 97.4 0.0043 9.4E-08 61.4 14.2 113 26-153 66-180 (451)
190 COG2270 Permeases of the major 97.4 0.00094 2E-08 66.9 9.7 159 2-175 257-427 (438)
191 KOG2504 Monocarboxylate transp 97.4 0.0011 2.5E-08 69.3 10.8 154 7-177 312-476 (509)
192 PRK11043 putative transporter; 97.4 0.0063 1.4E-07 61.2 15.9 100 14-117 225-327 (401)
193 PF03092 BT1: BT1 family; Int 97.3 0.0019 4.2E-08 66.3 11.8 150 14-172 11-170 (433)
194 KOG2504 Monocarboxylate transp 97.3 0.0016 3.4E-08 68.2 10.9 150 7-169 56-213 (509)
195 PF00083 Sugar_tr: Sugar (and 97.3 1.2E-05 2.7E-10 82.3 -5.0 131 28-169 46-184 (451)
196 TIGR00898 2A0119 cation transp 97.3 0.0023 5E-08 66.6 11.9 119 39-172 366-490 (505)
197 PF05977 MFS_3: Transmembrane 97.2 0.0039 8.6E-08 65.5 13.2 148 14-175 240-392 (524)
198 TIGR00886 2A0108 nitrite extru 97.2 0.0023 5E-08 63.2 10.4 106 8-116 240-348 (366)
199 TIGR00885 fucP L-fucose:H+ sym 97.2 0.0026 5.7E-08 64.8 10.9 141 14-169 254-404 (410)
200 COG2807 CynX Cyanate permease 97.1 0.0084 1.8E-07 59.1 13.0 162 5-181 220-390 (395)
201 PF12832 MFS_1_like: MFS_1 lik 97.1 0.0023 5.1E-08 49.0 7.4 54 14-69 22-75 (77)
202 PRK11462 putative transporter; 97.1 0.0078 1.7E-07 62.3 13.5 129 14-151 250-383 (460)
203 KOG1237 H+/oligopeptide sympor 97.0 0.0022 4.8E-08 67.9 8.7 260 33-368 11-276 (571)
204 PRK11652 emrD multidrug resist 97.0 0.019 4.1E-07 57.6 15.2 125 16-153 231-358 (394)
205 PF03209 PUCC: PUCC protein; 97.0 0.0094 2E-07 59.7 12.3 154 14-174 221-395 (403)
206 KOG2532 Permease of the major 96.9 0.015 3.2E-07 60.3 13.7 159 3-175 268-445 (466)
207 COG2211 MelB Na+/melibiose sym 96.8 0.016 3.4E-07 59.5 12.0 106 8-118 250-359 (467)
208 KOG0253 Synaptic vesicle trans 96.7 0.019 4.2E-07 56.8 11.5 136 2-153 335-494 (528)
209 PF03825 Nuc_H_symport: Nucleo 96.5 0.04 8.7E-07 56.0 12.9 154 15-176 230-394 (400)
210 KOG4332 Predicted sugar transp 96.4 0.001 2.3E-08 62.7 0.5 153 16-178 60-221 (454)
211 KOG0252 Inorganic phosphate tr 96.3 0.039 8.4E-07 56.1 10.9 134 25-165 81-234 (538)
212 TIGR00924 yjdL_sub1_fam amino 96.2 0.047 1E-06 56.8 11.9 157 14-179 294-470 (475)
213 PF11700 ATG22: Vacuole efflux 96.1 2.1 4.6E-05 44.6 26.9 79 36-119 78-159 (477)
214 PRK15403 multidrug efflux syst 95.9 0.15 3.2E-06 51.8 13.9 149 8-169 233-389 (413)
215 KOG2816 Predicted transporter 95.9 0.25 5.3E-06 51.2 15.3 119 40-175 74-197 (463)
216 PF03209 PUCC: PUCC protein; 95.8 2.4 5.2E-05 42.8 23.4 124 19-152 6-148 (403)
217 KOG0569 Permease of the major 95.8 0.13 2.7E-06 53.4 12.7 125 19-153 296-428 (485)
218 PRK10207 dipeptide/tripeptide 95.8 0.075 1.6E-06 55.5 11.2 164 8-180 284-479 (489)
219 COG0477 ProP Permeases of the 95.7 0.22 4.8E-06 46.1 13.1 131 22-165 31-173 (338)
220 COG0738 FucP Fucose permease [ 95.7 0.054 1.2E-06 54.2 8.7 144 6-166 245-399 (422)
221 TIGR00903 2A0129 major facilit 95.6 0.19 4E-06 50.4 12.6 150 6-173 205-361 (368)
222 PF05978 UNC-93: Ion channel r 95.5 0.088 1.9E-06 46.1 8.7 67 43-115 52-118 (156)
223 PF06813 Nodulin-like: Nodulin 95.4 0.47 1E-05 45.0 13.8 103 14-118 23-128 (250)
224 KOG2563 Permease of the major 95.1 0.67 1.5E-05 47.2 14.3 55 15-71 67-121 (480)
225 KOG2533 Permease of the major 94.5 0.13 2.8E-06 53.7 8.0 62 10-71 290-355 (495)
226 PF00083 Sugar_tr: Sugar (and 94.1 0.0021 4.5E-08 65.8 -6.1 142 17-171 277-430 (451)
227 KOG3626 Organic anion transpor 93.2 1.4 3E-05 47.8 13.1 147 19-175 123-341 (735)
228 TIGR00788 fbt folate/biopterin 93.1 0.32 6.9E-06 50.5 8.1 123 21-153 281-411 (468)
229 PF03137 OATP: Organic Anion T 93.0 0.025 5.4E-07 59.7 -0.4 158 7-175 16-248 (539)
230 PRK09584 tppB putative tripept 92.8 1.3 2.9E-05 46.3 12.2 139 30-178 318-480 (500)
231 KOG3098 Uncharacterized conser 91.9 17 0.00038 37.5 22.0 66 42-113 64-129 (461)
232 PRK03612 spermidine synthase; 91.3 2.7 5.9E-05 44.3 12.3 152 14-176 36-197 (521)
233 COG2270 Permeases of the major 90.3 4.8 0.0001 40.9 12.3 103 14-119 37-148 (438)
234 TIGR00805 oat sodium-independe 89.7 1 2.2E-05 48.6 7.7 68 3-71 340-411 (633)
235 PTZ00207 hypothetical protein; 89.6 0.85 1.8E-05 48.7 6.9 136 21-172 381-547 (591)
236 KOG0253 Synaptic vesicle trans 89.0 14 0.00029 37.4 14.0 137 22-175 107-250 (528)
237 PF01306 LacY_symp: LacY proto 88.9 5.1 0.00011 40.8 11.6 137 14-167 242-390 (412)
238 KOG3762 Predicted transporter 88.2 0.79 1.7E-05 47.8 5.2 56 14-71 33-88 (618)
239 PF01770 Folate_carrier: Reduc 86.9 7.1 0.00015 39.7 11.2 145 15-174 26-179 (412)
240 TIGR01301 GPH_sucrose GPH fami 86.4 6 0.00013 41.2 10.7 169 1-175 263-469 (477)
241 KOG4686 Predicted sugar transp 85.9 0.12 2.5E-06 49.7 -2.0 102 15-118 66-168 (459)
242 KOG2615 Permease of the major 83.9 5.3 0.00011 40.2 8.3 123 20-153 289-412 (451)
243 KOG3764 Vesicular amine transp 82.4 5.3 0.00011 40.4 7.7 86 310-425 106-191 (464)
244 TIGR00880 2_A_01_02 Multidrug 81.1 9.6 0.00021 30.8 8.0 79 317-425 5-83 (141)
245 PF01891 CbiM: Cobalt uptake s 80.2 23 0.00049 32.3 10.7 98 318-424 107-204 (205)
246 KOG2325 Predicted transporter/ 78.6 18 0.00039 37.7 10.4 120 23-153 66-193 (488)
247 PF06779 DUF1228: Protein of u 78.5 19 0.00041 28.0 8.1 62 6-71 8-69 (85)
248 KOG0637 Sucrose transporter an 77.8 1.6 3.5E-05 44.7 2.5 133 14-153 54-203 (498)
249 KOG0254 Predicted transporter 75.9 54 0.0012 34.2 13.6 47 23-71 325-371 (513)
250 KOG2816 Predicted transporter 73.9 9.2 0.0002 39.7 6.9 123 14-150 263-387 (463)
251 KOG0252 Inorganic phosphate tr 72.8 4.5 9.8E-05 41.6 4.2 125 39-175 358-496 (538)
252 KOG3762 Predicted transporter 69.4 6.5 0.00014 41.3 4.5 118 46-178 424-548 (618)
253 PRK07331 cobalt transport prot 65.5 57 0.0012 32.1 10.0 104 318-425 108-219 (322)
254 PF06645 SPC12: Microsomal sig 59.8 18 0.00039 27.4 4.3 53 130-183 10-62 (76)
255 PF14007 YtpI: YtpI-like prote 58.5 16 0.00034 28.7 3.8 54 130-185 28-86 (89)
256 KOG1330 Sugar transporter/spin 57.5 26 0.00057 36.2 6.2 80 315-425 73-153 (493)
257 KOG2563 Permease of the major 52.8 65 0.0014 33.2 8.1 40 22-62 295-334 (480)
258 KOG0255 Synaptic vesicle trans 52.4 2.1E+02 0.0045 29.7 12.4 114 23-152 348-465 (521)
259 KOG3574 Acetyl-CoA transporter 52.0 2.8E+02 0.0061 28.4 20.0 103 307-426 294-402 (510)
260 PF06963 FPN1: Ferroportin1 (F 49.7 2.4E+02 0.0052 29.0 11.9 101 14-116 280-386 (432)
261 PRK11909 cobalt transport prot 43.5 2.8E+02 0.006 25.9 10.3 34 392-425 182-216 (230)
262 TIGR00769 AAA ADP/ATP carrier 38.8 4.3E+02 0.0094 27.5 11.9 183 1-198 15-262 (472)
263 PRK06265 cobalt transport prot 35.0 3.4E+02 0.0075 24.5 9.8 93 318-425 102-196 (199)
264 TIGR00123 cbiM cobalamin biosy 32.4 3.2E+02 0.0069 25.1 8.8 31 395-425 181-211 (214)
265 KOG3626 Organic anion transpor 32.4 1E+02 0.0022 33.9 6.2 68 4-71 403-473 (735)
266 KOG4332 Predicted sugar transp 32.3 2.9E+02 0.0063 26.9 8.5 118 43-172 293-426 (454)
267 KOG4112 Signal peptidase subun 31.7 93 0.002 24.6 4.2 52 130-182 25-76 (101)
268 PF09527 ATPase_gene1: Putativ 31.6 1.4E+02 0.003 20.7 4.9 30 37-66 9-38 (55)
269 PRK15462 dipeptide/tripeptide 29.5 6.8E+02 0.015 26.2 11.9 102 14-116 290-407 (493)
270 KOG3098 Uncharacterized conser 26.3 7.2E+02 0.016 25.8 11.0 96 22-117 272-384 (461)
271 PRK08319 cobalt transport prot 26.3 5.2E+02 0.011 23.9 10.0 28 397-424 183-210 (224)
272 PF06609 TRI12: Fungal trichot 26.2 6.1E+02 0.013 27.4 10.7 68 3-71 320-392 (599)
273 TIGR00806 rfc RFC reduced fola 24.3 6.6E+02 0.014 26.5 10.2 33 392-425 114-146 (511)
274 COG5336 Uncharacterized protei 20.2 2.2E+02 0.0048 23.2 4.5 31 29-60 44-74 (116)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-68 Score=552.21 Aligned_cols=414 Identities=32% Similarity=0.485 Sum_probs=366.4
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---------h
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---------V 72 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---------~ 72 (427)
..||++|||+. +|+.|++..++.+..+|+..++.|.|..++.|++||++||.++|||+||.++++++.+ .
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~ 126 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAM 126 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999999999 9999999999999999999999999999999999999999999999999999999887 2
Q ss_pred hhcCCC-C---------CCC--CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHH
Q 037418 73 SYEYKP-E---------CIG--EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGV 138 (427)
Q Consensus 73 ~~~~~~-~---------~~~--~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~i 138 (427)
++.+.+ . |.. ..+...++.+|.++++|+|+.|||+.++++||+|+.++++ ++.+.++|| |+.+
T Consensus 127 ~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~---~~~~~~fFnW~yf~~ 203 (571)
T KOG1237|consen 127 IPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE---VKGIPSFFNWFYFSQ 203 (571)
T ss_pred hhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch---hhCcccchhHHHHHH
Confidence 232222 1 221 3456789999999999999999999999999999887776 666778998 9999
Q ss_pred HHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHHHhcccceeecCCCCChhHHHHHHHHHHHhhccCCCCCCCccc
Q 037418 139 VLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVFLSGTCSYRRRKPLGSPLTTVFRVFVASALKLFYRIPRNASEL 215 (427)
Q Consensus 139 NiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~p~g~pl~~~~~v~~~a~~~~~~~~~~~~~~l 215 (427)
|+|.+++.++..|+| ||.++|+++++.|++++++|+.|++.|++.+|.|+|++.+.+|++++.+|++.+.+.+.+..
T Consensus 204 ~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~~ 283 (571)
T KOG1237|consen 204 NGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEEL 283 (571)
T ss_pred HHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcchhc
Confidence 999999999999998 99999999999999999999999999999999999999999999999999988776553332
Q ss_pred cccCCcccccccccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHH
Q 037418 216 YERDNVDEIYVVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFL 295 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~ 295 (427)
+.+. ......++++.++++|+|+++.+.+..++...+||++|+++||||.|++++++|+|.+.++||+++.|+.|.++
T Consensus 284 -~~~~-~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v 361 (571)
T KOG1237|consen 284 -YYDC-TDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFV 361 (571)
T ss_pred -cccc-cccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhhee
Confidence 1110 11123355788899999999876655445567899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCC-ceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037418 296 EQADHLNRKVGK-LSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQS---KKYAPAIGFATSMVLAILCCITAAKVETR 371 (427)
Q Consensus 296 ~qa~~~d~~~~~-~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~---~~~s~~~ki~iG~~l~~ls~l~~~~~~~~ 371 (427)
.|+.+||+++++ +++|+++++.+..+.+++++|+++++++|+.+|.. +++++++|+++|+++..++|.+++++|.+
T Consensus 362 ~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~k 441 (571)
T KOG1237|consen 362 LQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAK 441 (571)
T ss_pred hhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHH
Confidence 999999999998 99999999999999999999999999998876533 45799999999999999999999999999
Q ss_pred HHhhhhhcCCCCCCCCCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 372 RLDVIRSHGLIDKPDDKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 372 ~~~~~~~~g~~~~~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
|++.+.++ ..+.+++|++||+|||+++|+||+|.+++++||+|+|||++|
T Consensus 442 rl~~~~~~-----~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM 491 (571)
T KOG1237|consen 442 RLKTAVSL-----LVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM 491 (571)
T ss_pred Hhhhhhhc-----cCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH
Confidence 99877651 224589999999999999999999999999999999999998
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-68 Score=531.23 Aligned_cols=372 Identities=19% Similarity=0.247 Sum_probs=301.0
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcC----CchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWK----ISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEY 76 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~----~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~ 76 (427)
+-||||||||| +|++|++.+++ +++++|..++++|++++|++|++|||+|||+||+|||+.+|++++.+ |+.+.
T Consensus 31 ~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~ 110 (498)
T COG3104 31 LWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLA 110 (498)
T ss_pred HHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 46999999999 99999999888 99999999999999999999999999999999999999999999999 44433
Q ss_pred CCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec-
Q 037418 77 KPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK- 153 (427)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~- 153 (427)
.++ ......++++|+++++|+|++|||++++++|||+++||| ||..|+ |+++|+|++++++++++++
T Consensus 111 ~~~---~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-------rD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 111 ISS---VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-------RDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred ccc---cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-------cCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 210 134678999999999999999999999999999999986 699999 9999999999999999998
Q ss_pred --cchhHhHHHHHHHHHHHHHHHhcccceeecC--CCCChhHH---------H-HHHHHHHHhhccCCCCCCCccccccC
Q 037418 154 --PWKIRFGIPAIFTVVATLVFLSGTCSYRRRK--PLGSPLTT---------V-FRVFVASALKLFYRIPRNASELYERD 219 (427)
Q Consensus 154 --g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~--p~g~pl~~---------~-~~v~~~a~~~~~~~~~~~~~~l~~~~ 219 (427)
||+.+|++++++|.+++++|+++++++.+.. |+.+|+.. + .++++..+... + ..+
T Consensus 181 ~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l--~~~-------- 249 (498)
T COG3104 181 NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLL-L--NQN-------- 249 (498)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHH-H--HHH--------
Confidence 9999999999999999999999999887653 33344321 0 11111110000 0 000
Q ss_pred CcccccccccCCCcch-hhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHH
Q 037418 220 NVDEIYVVQHTRSLRC-LDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQA 298 (427)
Q Consensus 220 ~~~~~~~~~~~~~~~~-ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa 298 (427)
..+. +....+... .+......+ ..+.+ |||||+++++|+++..++||++|+|++|++++|+
T Consensus 250 ------------~~~~~~~~~~i~~~----~~~~~~~~~-~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a 311 (498)
T COG3104 250 ------------TFSGVLLVISILIA----IIYFAEAFR-SPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYA 311 (498)
T ss_pred ------------HHHHHHHHHHHHHH----HHHHHHHhc-cCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 0000 000000000 000000000 11234 8999999999999999999999999999999999
Q ss_pred HH-hcCCCCCceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037418 299 DH-LNRKVGKLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIR 377 (427)
Q Consensus 299 ~~-~d~~~~~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~ 377 (427)
++ +|++..|+++||+|+|++||++++++.|+++++|+|+.++ +++|+++.|+++|+++++++++++.......
T Consensus 312 ~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~-~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~----- 385 (498)
T COG3104 312 DRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRG-NKQPSTPIKFALGLILAGLGFLILLLAGIWF----- 385 (498)
T ss_pred HHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcC-CCCCCcchHHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 55 8898777999999999999999999999999999999888 7899999999999999999999987765321
Q ss_pred hcCCCCCCCCCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 378 SHGLIDKPDDKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 378 ~~g~~~~~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
| ++..++|+||++++|+++++||+|+||+|+|.++++||++|
T Consensus 386 --~-----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~ 427 (498)
T COG3104 386 --G-----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL 427 (498)
T ss_pred --c-----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH
Confidence 1 01357999999999999999999999999999999999875
No 3
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=9.7e-52 Score=423.84 Aligned_cols=372 Identities=16% Similarity=0.142 Sum_probs=287.4
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+.|||+|||++ .+..|+++.+|+++.+++.+++.+....++++++||+++||++||||++++|.+++.+....+..
T Consensus 19 ~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~--- 95 (493)
T PRK15462 19 IWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA--- 95 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH---
Confidence 56999999999 99999999999999999999999999999999999999999999999999999988872221210
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
.......+++++.++++|.|+++||.+++++|+|+++|++ |++.|+ |+++|+|+++++.++++++ ||+
T Consensus 96 ~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~-------R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~ 168 (493)
T PRK15462 96 SEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR-------RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWA 168 (493)
T ss_pred hhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc-------ccceehHHHHHHHHHHHHHHHHHHHHHhhhChH
Confidence 0112234667888899999999999999999999887654 577888 9999999999999999996 999
Q ss_pred hHhHHHHHHHHHHHHHHHhcccceeecCC-CCChhHH--HHHHH-----HHH-----HhhccCCCCCCCccccccCCccc
Q 037418 157 IRFGIPAIFTVVATLVFLSGTCSYRRRKP-LGSPLTT--VFRVF-----VAS-----ALKLFYRIPRNASELYERDNVDE 223 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif~~~~~~~~~~~p-~g~pl~~--~~~v~-----~~a-----~~~~~~~~~~~~~~l~~~~~~~~ 223 (427)
++|.+++++|++++++++.++|++.+..+ +.+|.++ ..+.. ... ....... +. ...
T Consensus 169 ~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~- 237 (493)
T PRK15462 169 MGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFW---KE-------WSV- 237 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HH-------HHH-
Confidence 99999999999999999998887654311 1223211 00000 000 0000000 00 000
Q ss_pred ccccccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHH-Hhc
Q 037418 224 IYVVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQAD-HLN 302 (427)
Q Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~-~~d 302 (427)
..+-...... ....-+...+..+.|||||+..++++++..++||+.|+|++++++++++ ++|
T Consensus 238 ----------~~~~~~~~~~-------~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd 300 (493)
T PRK15462 238 ----------YALIVATIIG-------LGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVN 300 (493)
T ss_pred ----------HHHHHHHHHH-------HHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcc
Confidence 0000000000 0000000000122478999999999999999999999999999999995 599
Q ss_pred CCCCCceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 037418 303 RKVGKLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLI 382 (427)
Q Consensus 303 ~~~~~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~ 382 (427)
++++|+++|++|+|++||++|+++.|++.++|.++.|+ +++||.++|+++|++++++||+++.+.... ++++
T Consensus 301 ~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~-~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~----~~~~--- 372 (493)
T PRK15462 301 RDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG-NRTVRIWGKFALGLGLMSAGFCILTLSARW----SAMY--- 372 (493)
T ss_pred chhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCCC---
Confidence 99999999999999999999999999999999998776 679999999999999999999998876521 1111
Q ss_pred CCCCCCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 383 DKPDDKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 383 ~~~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
.++|++|++..|+++++||+|++|.+++++++.||+++
T Consensus 373 ------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~ 410 (493)
T PRK15462 373 ------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV 410 (493)
T ss_pred ------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH
Confidence 25899999999999999999999999999999999874
No 4
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=8.4e-51 Score=429.78 Aligned_cols=327 Identities=21% Similarity=0.331 Sum_probs=280.9
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh--hcCC--CCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS--YEYK--PECI 81 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~--~~~~--~~~~ 81 (427)
||||||+ +|++|+++.+|+++++|+.+++.|.+++|++|++||++||+++||||+++++.+++.+.. ..+. ++-.
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 7999999 999999999999999999999999999999999999999999999999999999988722 2121 1100
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec------
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK------ 153 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~------ 153 (427)
...+....+++|+++++|+|++|||++++++|||++++++ +++++|+ |+++|+|+++++++.++++
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~------~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f 154 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLS------LRSRFFSFFYFAINAGSLISTIITPILRGDVGCF 154 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 1123455779999999999999999999999999875543 3789999 9999999999999999886
Q ss_pred ----cchhHhHHHHHHHHHHHHHHHhcccceeecCCCCChhHHHHHHHHHHHhhccCCCCCCCccccccCCccccccccc
Q 037418 154 ----PWKIRFGIPAIFTVVATLVFLSGTCSYRRRKPLGSPLTTVFRVFVASALKLFYRIPRNASELYERDNVDEIYVVQH 229 (427)
Q Consensus 154 ----g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~p~g~pl~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 229 (427)
||+++|++|+++|++++++|..++|+|++.+|+++++.++.+++..+.+++...... +
T Consensus 155 g~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~------------------~ 216 (654)
T TIGR00926 155 GCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE------------------H 216 (654)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc------------------c
Confidence 499999999999999999999999999888889999998889888887765322110 0
Q ss_pred CCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHHHhcCCCCCce
Q 037418 230 TRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQADHLNRKVGKLS 309 (427)
Q Consensus 230 ~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~~~d~~~~~~~ 309 (427)
...+|+|+++... .++++||+|++++++++++..++||++++|++|++++|+++||+++++++
T Consensus 217 -~~~~~ld~a~~~~----------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ 279 (654)
T TIGR00926 217 -WPLHWLDYAKDKH----------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFE 279 (654)
T ss_pred -cchhHHHHhcccc----------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEe
Confidence 0135777765432 24678999999999999999999999999999999999999999999999
Q ss_pred ecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037418 310 VPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLD 374 (427)
Q Consensus 310 ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~ 374 (427)
+|++++|++|+++++++.|+++..++|..+|++.++++++|+++|++++++++++++++|.++++
T Consensus 280 ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~ls~l~k~~iG~~la~la~~va~~ve~~~~~ 344 (654)
T TIGR00926 280 IQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLKVNP 344 (654)
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999997666665554678999999999999999999999999987753
No 5
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.3e-46 Score=389.55 Aligned_cols=371 Identities=13% Similarity=0.113 Sum_probs=285.2
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPEC 80 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~ 80 (427)
+.|||+||+++ ++.+|+++++|+++++++.+++.+.+..|+++++||+++||++||||++++|.+++.+ +++....
T Consensus 24 ~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~-- 101 (489)
T PRK10207 24 LWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS-- 101 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh--
Confidence 57999999999 9999999999999999999999999999999999999999988999999999999888 3332211
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cc
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PW 155 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~ 155 (427)
......+++++.+.++|.|+++||..++++|+|+++++| +++.|+ |+++|+|+++|+.+++++. ||
T Consensus 102 --~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~-------~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 102 --LLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR-------LDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred --ccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh-------hhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 112234668899999999999999999999999876643 466777 9999999999999999997 99
Q ss_pred hhHhHHHHHHHHHHHHHHHhcccceeec--CCCCChhH--HHHHHH------HHHHhhccCCCCCCCccccccCCccccc
Q 037418 156 KIRFGIPAIFTVVATLVFLSGTCSYRRR--KPLGSPLT--TVFRVF------VASALKLFYRIPRNASELYERDNVDEIY 225 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~~~~~~~~~~--~p~g~pl~--~~~~v~------~~a~~~~~~~~~~~~~~l~~~~~~~~~~ 225 (427)
+++|.++++++.++++.+..+++++++. +|++++.. ...... ....... .... +...
T Consensus 173 ~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~----------- 239 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWL-MHNV-EVAN----------- 239 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHH-Hhhh-hHHH-----------
Confidence 9999999999999999999888777553 23343331 111000 0010000 0000 0000
Q ss_pred ccccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHH-HhcCC
Q 037418 226 VVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQAD-HLNRK 304 (427)
Q Consensus 226 ~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~-~~d~~ 304 (427)
..+........ ...-++..+.+ .+++++.+..+++++..++||.+++|+.+++++|++ ++|++
T Consensus 240 --------~~~~~~~~i~~-------~~f~~~~~~~~-~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~ 303 (489)
T PRK10207 240 --------LVLIVLSIVVT-------IIFFREAFKLD-KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHE 303 (489)
T ss_pred --------HHHHHHHHHHH-------HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccc
Confidence 00000000000 00000001112 345677777888899999999999999999999997 58988
Q ss_pred CCCceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 037418 305 VGKLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDK 384 (427)
Q Consensus 305 ~~~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~ 384 (427)
..|+++|++++|++||++++++.|+.++++.|+.+| ++++++++|+++|+++++++++++++.+... +..
T Consensus 304 ~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r-~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~------ 373 (489)
T PRK10207 304 ILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK-GKDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADA------ 373 (489)
T ss_pred ccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCC------
Confidence 889999999999999999999999999999999887 8899999999999999999998876654211 111
Q ss_pred CCCCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 385 PDDKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 385 ~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
..++|+||+++.|+++|+||.|++|+++|++++.+|++|
T Consensus 374 ---~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~ 412 (489)
T PRK10207 374 ---QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL 412 (489)
T ss_pred ---CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH
Confidence 124789999999999999999999999999999999986
No 6
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=3.5e-45 Score=378.17 Aligned_cols=375 Identities=14% Similarity=0.123 Sum_probs=285.4
Q ss_pred hhHHHHHHhHH-HHHHHhhHh--cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNV--WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPE 79 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~--l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~ 79 (427)
+.||++||++. ++.+|++++ +|++..+++.+++.+....++++++||+++||++||||++.++.+++.+....+..
T Consensus 20 ~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~- 98 (475)
T TIGR00924 20 LWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM- 98 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh-
Confidence 67999999999 999999988 99999999999999999999999999999999889999999999988872221110
Q ss_pred CCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---c
Q 037418 80 CIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---P 154 (427)
Q Consensus 80 ~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g 154 (427)
..+.+.+++++.+.++|.|+++|+.+++++|+++++++++ +++.|+ |++.|+|+++|+.+++++. |
T Consensus 99 ---~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 99 ---SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR------RDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred ---cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc------ccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1235567788999999999999999999999998765322 466777 9999999999999999987 9
Q ss_pred chhHhHHHHHHHHHHHHHHHhcccceeecCCCCChhHHH-----H--HH----HHHHHhhccCCCCCCCccccccCCccc
Q 037418 155 WKIRFGIPAIFTVVATLVFLSGTCSYRRRKPLGSPLTTV-----F--RV----FVASALKLFYRIPRNASELYERDNVDE 223 (427)
Q Consensus 155 ~~~~F~i~~v~~~i~~iif~~~~~~~~~~~p~g~pl~~~-----~--~v----~~~a~~~~~~~~~~~~~~l~~~~~~~~ 223 (427)
|+++|.++++.++++.++++..++.+++.+++++++.+. . +. +....+...........
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 239 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIA---------- 239 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHH----------
Confidence 999999999999999999988888776554433332110 0 00 00011110000000000
Q ss_pred ccccccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHH-HHhc
Q 037418 224 IYVVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQA-DHLN 302 (427)
Q Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa-~~~d 302 (427)
....+ ..+.+...+... ....| +.+++ |+++..++++++++.++||++|+|+.+++.+|+ +++|
T Consensus 240 -~~~~~-----~~~~~~~~~~~~----~~~~~----~~~~~-~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~ 304 (475)
T TIGR00924 240 -NILLM-----TVTLAVIIFFFR----LAFKP----RLDAV-ARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMH 304 (475)
T ss_pred -HHHHH-----HHHHHHHHHHHH----HHHhc----cCCHH-HHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcc
Confidence 00000 000011110000 00011 12333 445556789999999999999999999987766 5699
Q ss_pred CCCCCceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 037418 303 RKVGKLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLI 382 (427)
Q Consensus 303 ~~~~~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~ 382 (427)
++++++++|+++++++|++++++++|+++++|.++.+| ++++++..|+++|++++++|++.+++... .++.
T Consensus 305 ~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~-~~~~~~~~k~~~G~~l~~~~~~~~~~~~~----~~~~---- 375 (475)
T TIGR00924 305 HEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK-GKDPTTPLKFTLGMLFCGASFLTFAASIW----FADA---- 375 (475)
T ss_pred ccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHh----hcCC----
Confidence 99999999999999999999999999999999888887 78899999999999999999999887631 1111
Q ss_pred CCCCCCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 383 DKPDDKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 383 ~~~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
..++|+||++++|++.|+||++++|+++|+++++||+++
T Consensus 376 -----~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 376 -----GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred -----CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 236899999999999999999999999999999999875
No 7
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=100.00 E-value=8.5e-45 Score=364.20 Aligned_cols=343 Identities=30% Similarity=0.415 Sum_probs=235.6
Q ss_pred HHHHHHHHHHHHH-hhhc-CC--CC-CCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHH
Q 037418 59 YWMLLVSSLAYSA-VSYE-YK--PE-CIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFF 133 (427)
Q Consensus 59 ~~~i~~g~~~~~~-~~~~-~~--~~-~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f 133 (427)
||||++|++++.+ ++.+ +. ++ .....+.+.+++||.++++|+|++|||++++++|||+++++++ +|++|
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~------~~~~F 74 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSR------RDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTH------HHHHH
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhh------hhhhH
Confidence 7999999999998 2221 11 11 1124457899999999999999999999999999999875433 79999
Q ss_pred H--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHHHhcccceeec-CCCCChhHH-HHHHHHHHHhhccC
Q 037418 134 S--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVFLSGTCSYRRR-KPLGSPLTT-VFRVFVASALKLFY 206 (427)
Q Consensus 134 ~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif~~~~~~~~~~-~p~g~pl~~-~~~v~~~a~~~~~~ 206 (427)
+ ||++|+|++++.+..+++| ||+++|++|+++|++++++|+.++++|++. +|.++++.+ ...+...+.+++..
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVAAFKKRKL 154 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHHHHHHHCC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHHHHHHhhc
Confidence 8 9999999999999999999 999999999999999999999999999988 678888887 44555666666544
Q ss_pred CCCCCCccccccCCcccccccccCCCcchhhhhhccCCCccchhccCCcccc-cchhhHHHHHhhccchhhhhhhHhhHh
Q 037418 207 RIPRNASELYERDNVDEIYVVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRL-CRVTEIEETKGLLRMIPICLTFIIPGV 285 (427)
Q Consensus 207 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~-~~~~~ve~~k~~~~~l~l~~~~~~f~~ 285 (427)
..+.....+++...... .....+.....+.+..... ....|.. ++++++|+.|.+.+.+|.+.+.++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~ 225 (372)
T PF00854_consen 155 AVPKGSSWLDWALFQYS--ERSIFGIIVFIRAAVIFFP-------EIFFWALFCQVQRVEELKALIRFLPIFLFWIFYWQ 225 (372)
T ss_dssp CH-HHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHCC-------CHHHHTTTSSTTTHHHCCHHHCHHHCCCHHHHHHH
T ss_pred ccccchHHHHHhhhhhh--hhhhhhhhhhccchhhhhh-------hhhhcccCCccceeeeeeeeeeccccCeEEEEeee
Confidence 43311110111000000 0000000011111111110 0111221 567889999999999999999999999
Q ss_pred hhcccchhHHHHHHHhcCCCCC-ceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHH
Q 037418 286 VSSIGFTYFLEQADHLNRKVGK-LSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCIT 364 (427)
Q Consensus 286 ~~~Q~~s~~~~qa~~~d~~~~~-~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~ 364 (427)
.+.|..+....|+.++|+.+++ +++|++++|++|++++++++|+++++++|+.++ ++++++++|+++|++++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~~~~~~~k~~~G~~~~~~~~~~ 304 (372)
T PF00854_consen 226 MYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-GIQPSPPQKFGIGMVFAILAMFV 304 (372)
T ss_dssp HCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT-------HHHHHHH-HHHHHHHHT
T ss_pred hhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-cccchhhhhhhHHHHHHHHHHHH
Confidence 9999988888999999999999 999999999999999999999999999999887 88999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcCCCCCCCCCccchHHHHHHHHHHHHHHhHhhhhhhHH----HHHhcCCCCC
Q 037418 365 AAKVETRRLDVIRSHGLIDKPDDKIPMSMFWLLPQFLLLGGFDGVCEVSIAC----FFIDQFPPLL 426 (427)
Q Consensus 365 ~~~~~~~~~~~~~~~g~~~~~~~~~~~s~~wlv~~y~l~~~gEl~~~~~~le----f~~~~aP~~m 426 (427)
++.+|.+|...++.+| +.+.+|++|.|++.+++|++++++++| ++++++|+.|
T Consensus 305 ~~~v~~~r~~~~~~~~---------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m 361 (372)
T PF00854_consen 305 AAIVEIRRLCYAQPCG---------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSM 361 (372)
T ss_dssp TTHHHH---HH----T---------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSS
T ss_pred HHHHHhhhhhcccccC---------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHH
Confidence 9999987765544433 456699999999999999999999999 6666666655
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=5.2e-42 Score=356.63 Aligned_cols=369 Identities=14% Similarity=0.131 Sum_probs=278.5
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+.||++||+++ .+..|+++++|+++++++.+.+.+....+..++++|+++||++|||+++.++.+++.+.......
T Consensus 31 ~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~--- 107 (500)
T PRK09584 31 LWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAW--- 107 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH---
Confidence 67999999999 99999999999999999999999999999999999999999889999999999888762221110
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
.....+.+++++.+.++|.|+++|+.+++++|+|++++++ +++.++ |+++|+|+++|+.+++++. ||+
T Consensus 108 ~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~-------~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~ 180 (500)
T PRK09584 108 SGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR-------LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWS 180 (500)
T ss_pred hcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh-------hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHH
Confidence 0123456678889999999999999999999999876543 355666 9999999999999999997 999
Q ss_pred hHhHHHHHHHHHHHHHHHhcccceeec--CCCCChhHH------HHHHHHHHHh-hccCCCCCCCccccccCCccccccc
Q 037418 157 IRFGIPAIFTVVATLVFLSGTCSYRRR--KPLGSPLTT------VFRVFVASAL-KLFYRIPRNASELYERDNVDEIYVV 227 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif~~~~~~~~~~--~p~g~pl~~------~~~v~~~a~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 227 (427)
++|.++++.+.++++.++..++.+++. +|+++|... ...+...... ....+.+. ... ..
T Consensus 181 ~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--------~~ 248 (500)
T PRK09584 181 VAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQE----IAR--------MA 248 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcch----HHH--------HH
Confidence 999999999999998888877666543 233333221 1111111111 10000000 000 00
Q ss_pred ccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHHH-hcCCCC
Q 037418 228 QHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQADH-LNRKVG 306 (427)
Q Consensus 228 ~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~~-~d~~~~ 306 (427)
..+........ ...+.+..+ .+|+|+.+..+++++..++||++++|+.+.++.|+.+ +|+++.
T Consensus 249 -----~~~~~~~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~ 312 (500)
T PRK09584 249 -----LGVVALGIVVI----------FGKEAFAMK-GAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL 312 (500)
T ss_pred -----HHHHHHHHHHH----------HHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcccccc
Confidence 00000000000 000001122 3456677777889999999999999999999999855 898999
Q ss_pred CceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 037418 307 KLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPD 386 (427)
Q Consensus 307 ~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~ 386 (427)
|+.+|++++|++|++++++++|+++++|.|+.+| +++.+|+++|++++++++++++.... .+++
T Consensus 313 g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r----~~~~~~~~~G~~l~~l~f~~l~~~~~----~~~~-------- 376 (500)
T PRK09584 313 GIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR----LPMPHKFAIGMVLCSGAFLVLPLGAK----FAND-------- 376 (500)
T ss_pred ceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC----CCcHHHHHHHHHHHHHHHHHHHHHHH----hcCC--------
Confidence 9999999999999999999999999999777544 56899999999999999999876542 1111
Q ss_pred CCccchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 387 DKIPMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 387 ~~~~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
...+|++|++++|+++|+||++++|+++|++++++|++|
T Consensus 377 -~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~ 415 (500)
T PRK09584 377 -AGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL 415 (500)
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH
Confidence 246899999999999999999999999999999999976
No 9
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=3.1e-13 Score=136.68 Aligned_cols=156 Identities=14% Similarity=0.137 Sum_probs=120.2
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+.-.++++... .+..|+++++|++..+++.+.+.+.....+..++.|+++||+ |||+++.++.++..+...... .
T Consensus 17 ~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~--~- 92 (395)
T PRK10054 17 LLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIP--L- 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHH--H-
Confidence 34567777777 889999999999999999999998888888999999999995 999999998877766222111 0
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchh
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKI 157 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~ 157 (427)
..+.+.+++...+.+.+.+.+.|...+...|..++++ +.+.++ |...|+|..+++.+.+++. ||+.
T Consensus 93 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~ 162 (395)
T PRK10054 93 -VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS---------KTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINL 162 (395)
T ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 1234455555666777777888888888888875432 344555 8899999999999998876 9999
Q ss_pred HhHHHHHHHHHHHHH
Q 037418 158 RFGIPAIFTVVATLV 172 (427)
Q Consensus 158 ~F~i~~v~~~i~~ii 172 (427)
.|.+.++..+++++.
T Consensus 163 ~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 163 PFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888777766543
No 10
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.54 E-value=2.7e-12 Score=130.14 Aligned_cols=156 Identities=11% Similarity=0.054 Sum_probs=124.0
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIG 82 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~ 82 (427)
.-+++++.+. .+..|+.+++|++..+.+.+.+.......++.+++|.++||+ |||+++.++..+..+...... .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~----~ 95 (400)
T PRK11646 21 LVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMA----I 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHH----H
Confidence 4567777777 888999999999999999999999988899999999999995 999999999888877222211 0
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhH
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIR 158 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~ 158 (427)
..+.+.+++...+.+++.|...|...+++.|..++++ +.+.++ +...++|..+|+.+++++. ||++.
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~ 166 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ---------RGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLV 166 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 1345677788889999999999999999988775432 344444 7888999999999888876 99999
Q ss_pred hHHHHHHHHHHHHHH
Q 037418 159 FGIPAIFTVVATLVF 173 (427)
Q Consensus 159 F~i~~v~~~i~~iif 173 (427)
|.+.++..+++.++.
T Consensus 167 f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 167 CATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998877766655443
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.53 E-value=5.6e-13 Score=130.90 Aligned_cols=153 Identities=18% Similarity=0.261 Sum_probs=122.6
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECI 81 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~ 81 (427)
..++..... .+..++.+++|.+..+.+.+.+.+.....++.++.|+++||+ ||||++.++.++..+. +..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~---- 82 (352)
T PF07690_consen 8 SGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFA---- 82 (352)
T ss_dssp HHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhh----
Confidence 334444444 444488889999999999999999999999999999999995 9999999998888773 22221
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
.+.+.+.++..+.++|.+...|...+++.|.+++++ |...++ ..+.++|..+++.+++++. ||+
T Consensus 83 --~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~ 151 (352)
T PF07690_consen 83 --SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE---------RGRAFGILSAGFSLGSILGPLLGGFLISYFGWR 151 (352)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC---------HHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHC
T ss_pred --hhHHHHhhhccccccccccccccccccccccchhhh---------hhhccccccchhhhhhhcccchhhhhhhccccc
Confidence 244578889999999999999999999999988743 344455 7889999999999998876 899
Q ss_pred hHhHHHHHHHHHHHHHH
Q 037418 157 IRFGIPAIFTVVATLVF 173 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif 173 (427)
+.|.+.++..+++.++.
T Consensus 152 ~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 152 WAFLISAILSLIAAILF 168 (352)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhH
Confidence 99999999888887643
No 12
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.48 E-value=1.1e-11 Score=122.14 Aligned_cols=156 Identities=11% Similarity=0.002 Sum_probs=117.5
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGE 83 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~ 83 (427)
++..... .+..|.. +++.+..+.+.+...+.....++.++.|+++||+ ||||+++++..+..+. +....+ ....
T Consensus 13 ~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-~~~~ 89 (365)
T TIGR00900 13 IGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFVA-LLGG 89 (365)
T ss_pred HHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 3333344 5666766 4899999999999999999999999999999995 9999999988776551 111110 0001
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhH
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIR 158 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~ 158 (427)
.+.+.++++..+.+++.|...|...+++.|.+++++ |.+.++ ..+.++|.++++.+++++. ||+..
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~ 160 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ---------LTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWA 160 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 356778888999999999999999999999886542 344444 6888999999998888775 99999
Q ss_pred hHHHHHHHHHHHHHHH
Q 037418 159 FGIPAIFTVVATLVFL 174 (427)
Q Consensus 159 F~i~~v~~~i~~iif~ 174 (427)
|.+.++..+++.+...
T Consensus 161 ~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 161 IWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888777666554443
No 13
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.41 E-value=9.6e-11 Score=120.98 Aligned_cols=146 Identities=14% Similarity=0.106 Sum_probs=115.4
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
....++.+++|.+..+.+.+.+.+.....++.+++|+++||+ ||||.+.++..++.+...... ...+.+.+.++.
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~ 97 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCG----VAPNLELMIIFR 97 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHh----CcCCHHHHHHHH
Confidence 456677788999999999999999999999999999999995 999999999888877222111 023567788899
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.++|.|...|...+++.|.+++++ |...+. +.+.++|..+++.+++++. ||++.|.+.+...++
T Consensus 98 ~~~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~ 168 (485)
T TIGR00711 98 VIQGFGGGPLIPLSFSTLLNIYPPEK---------RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGII 168 (485)
T ss_pred HHHHhhhhhHHHHHHHHHHHHCCHHH---------HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHH
Confidence 99999999999999999999886432 333444 6788999999998888775 999999887666555
Q ss_pred HHHHH
Q 037418 169 ATLVF 173 (427)
Q Consensus 169 ~~iif 173 (427)
+.++.
T Consensus 169 ~~~~~ 173 (485)
T TIGR00711 169 VVVVA 173 (485)
T ss_pred HHHHH
Confidence 54443
No 14
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.41 E-value=4.9e-11 Score=116.52 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=125.5
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+.+.++++... .+..|. +++|.+..+.+.+.........+..++.|+++||+ ||||++.++.++..+.......
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~--- 83 (352)
T cd06174 9 FLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAF--- 83 (352)
T ss_pred HHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHH---
Confidence 56777777777 666666 46799999999999999999999999999999995 9999999999888772221110
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
..+.+.++++..+.+++.+...+...++..|.+++++ |...++ +.+.++|..+++.+.+.+. +|+
T Consensus 84 -~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 153 (352)
T cd06174 84 -ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE---------RGRALGLFSAGFGLGALLGPLLGGLLAESLGWR 153 (352)
T ss_pred -hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc---------hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 1356778889999999999999999999999887632 344444 7889999999999888776 799
Q ss_pred hHhHHHHHHHHHHHHHHH
Q 037418 157 IRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif~ 174 (427)
..|.+.++..+++.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 154 WLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999988887777665544
No 15
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.41 E-value=4.4e-11 Score=119.30 Aligned_cols=146 Identities=14% Similarity=0.125 Sum_probs=113.6
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
..++.+++|.++.+++.+.+.+.....+..++.|+++||+ ||||.+..+..+..+...... ...+.+.+.++..+
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l 102 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLA----LSNNIETLLVLRFV 102 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHH----HHccHHHHHHHHHH
Confidence 3456778999999999999999999999999999999995 999999999877776222111 02345677788899
Q ss_pred HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 96 i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
.++|.+...+...+++.|.+++++ +.+.+. +...++|..+++.+.+++. ||+..|.+.++..++..
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEE---------LSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999876432 333444 6788888888888888765 89999988777766665
Q ss_pred HHHHh
Q 037418 171 LVFLS 175 (427)
Q Consensus 171 iif~~ 175 (427)
+....
T Consensus 174 ~~~~~ 178 (385)
T TIGR00710 174 ALIFF 178 (385)
T ss_pred HHHHH
Confidence 55443
No 16
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=1.1e-10 Score=115.98 Aligned_cols=158 Identities=10% Similarity=0.035 Sum_probs=108.8
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHH-HHHHHHh--hhcCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVS-SLAYSAV--SYEYKP 78 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g-~~~~~~~--~~~~~~ 78 (427)
+.-.+++.... .+..|+.+++|.+..+.+.+.+.+.....+..++.|.++||+ ||||.+++. ..+..+. +...
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~-- 83 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAW-- 83 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHh--
Confidence 44456666667 899999999999999999999999888888888899999996 998876554 4443331 1112
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--- 153 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--- 153 (427)
..+.+.+++...+.+.+.+...|...++..|..++++ + .+..... +.+.++|..+++.+.+++.
T Consensus 84 ----~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~ 152 (375)
T TIGR00899 84 ----NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG-R------EAVMFSSVMRAQISLAWVIGPPLAFWLALGF 152 (375)
T ss_pred ----cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc-h------hhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc
Confidence 1244555555556666666667777777666543211 1 1111122 5678999999998888774
Q ss_pred cchhHhHHHHHHHHHHHHHHH
Q 037418 154 PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif~ 174 (427)
||++.|.+.++..++..++.+
T Consensus 153 ~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 153 GFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 999999988887666654443
No 17
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=7.3e-11 Score=118.86 Aligned_cols=143 Identities=12% Similarity=0.105 Sum_probs=110.9
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
...+.+++|.+..+.+.+.+.+.....++.++.|+++||+ ||||.+..+.++..+...... ...+.+.++++..+
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~~ 106 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSA----LAWNFTVLLISRIG 106 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHH----HhccHHHHHHHHHH
Confidence 4566778999999999999999888888888889999996 999999999888776221111 02356777888889
Q ss_pred HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 96 i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
.+++.+...|...+++.|.+++++ |.+.++ ..+.++|..+++.+.+.+. ||++.|.+.++..++..
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGK---------KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhh---------hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHH
Confidence 999999999999999999886532 233444 6778899999988887765 99999998877665554
Q ss_pred HH
Q 037418 171 LV 172 (427)
Q Consensus 171 ii 172 (427)
+.
T Consensus 178 ~~ 179 (390)
T PRK03545 178 LL 179 (390)
T ss_pred HH
Confidence 43
No 18
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.39 E-value=7.3e-11 Score=120.13 Aligned_cols=164 Identities=9% Similarity=-0.024 Sum_probs=100.7
Q ss_pred hhhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhcCCCC
Q 037418 2 FWADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYEYKPE 79 (427)
Q Consensus 2 ~~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~~~~~ 79 (427)
++...++++... .+..|+++++|++..+++.+.+.+.....+++++.|+++||+ ||||+++++..+..+. .+.....
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~ 97 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVLFGPFFIYV 97 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 345556676666 899999999999999999999999999999999999999995 9999998876554431 1100000
Q ss_pred CCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cc
Q 037418 80 CIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PW 155 (427)
Q Consensus 80 ~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~ 155 (427)
.. .........+..+.++..|..-+...+...+.. ++.+++ +...++ ....++|..+++.+.+++. +|
T Consensus 98 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~ 169 (420)
T PRK09528 98 FA-PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVSRR------SGFEYGRARMWGSLGWALCAFIAGILFNINP 169 (420)
T ss_pred HH-HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHHhh------ccccchhhHHhhhHHHHHHHHHHHHHHhcCc
Confidence 00 000001112222223333332222222222221 111111 111233 6677899999998888775 89
Q ss_pred hhHhHHHHHHHHHHHHHHH
Q 037418 156 KIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~ 174 (427)
+..|.+.++..+++.++.+
T Consensus 170 ~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 170 QINFWLGSGSALILLVLLF 188 (420)
T ss_pred hHhHHHHHHHHHHHHHHHh
Confidence 9999887777666655544
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=1.3e-10 Score=115.17 Aligned_cols=147 Identities=16% Similarity=0.119 Sum_probs=115.5
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
....++.+++|.+..+.+.+.+++.....+..++.|+++||+ |||+++.++.++..+...... ...+.+.++++.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 89 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQA----FAGAYVSLYILR 89 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHH----HHcCHHHHHHHH
Confidence 445667889999999999999999999999999999999995 999999999887766221111 012567888899
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.++|.|...|...+++.|.+++++ |.+.++ ..+.++|.++++.+.+++. ||++.|.+.++..++
T Consensus 90 ~l~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 90 VLLGAAEAPFFPGIILIVASWFPASE---------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHhhhhHHHHHHHHhCCHHH---------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999876432 344444 6788999999988888654 999999987776655
Q ss_pred HHHHHH
Q 037418 169 ATLVFL 174 (427)
Q Consensus 169 ~~iif~ 174 (427)
..++..
T Consensus 161 ~~~~~~ 166 (399)
T TIGR00893 161 WGVLWL 166 (399)
T ss_pred HHHHhh
Confidence 554443
No 20
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.36 E-value=1.7e-10 Score=116.43 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=116.5
Q ss_pred hHHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCC
Q 037418 4 ADIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 4 ~eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~ 83 (427)
.|-+..+........+.+++|.++.+++.+.+.+.....+.+++.|+++||+ ||||++.++.++..+...... ..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~ 100 (406)
T PRK11551 26 LEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATA----QA 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHH----Hh
Confidence 4444444444444566678999999999999999999999999999999995 999999999877766211111 02
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhH
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIR 158 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~ 158 (427)
.+.+.+.+...+.+++.|...|...+++.|.+++++ +.+..+ +.+.++|.++++.++..+. +|+..
T Consensus 101 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 171 (406)
T PRK11551 101 WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL---------RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHI 171 (406)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 356677788899999999999999999999886432 334444 7888999999988876654 89999
Q ss_pred hHHHHHHHHHHHHH
Q 037418 159 FGIPAIFTVVATLV 172 (427)
Q Consensus 159 F~i~~v~~~i~~ii 172 (427)
|.+.++..++..++
T Consensus 172 ~~~~~~~~~~~~~~ 185 (406)
T PRK11551 172 FYVGGVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 98877665554433
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=2.8e-10 Score=114.06 Aligned_cols=154 Identities=16% Similarity=0.202 Sum_probs=115.1
Q ss_pred hhHHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCC
Q 037418 3 WADIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIG 82 (427)
Q Consensus 3 ~~eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~ 82 (427)
+.+.+.++-+......+.+++|.+..+++.+.+.+.....+..++.|+++||+ |||+++.++.++..+...... .
T Consensus 22 ~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~----~ 96 (405)
T TIGR00891 22 LLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACG----F 96 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH----H
Confidence 44555555555455677788999999999999999999999999999999995 999999999877766211111 0
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec-----cc
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK-----PW 155 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~-----g~ 155 (427)
..+.+.++.+..+.++|.|...+...++..|.+++++ +..... ..+.++|..+++.+.+.+. +|
T Consensus 97 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 97 APGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL---------RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred hccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 2356677888999999999999999999999886532 233333 5677888888887776653 49
Q ss_pred hhHhHHHHHHHHHHH
Q 037418 156 KIRFGIPAIFTVVAT 170 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~ 170 (427)
++.|.+.++..++.+
T Consensus 168 ~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 168 RALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999987665554443
No 22
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=3.4e-10 Score=112.94 Aligned_cols=145 Identities=15% Similarity=0.202 Sum_probs=110.8
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
....++.+++|.+..+++.+.+.+.....+..+++|+++||+ |||+++.++..+..+....... ..+.+.++++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 112 (398)
T TIGR00895 38 FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCAL----ATNVTQLLILR 112 (398)
T ss_pred hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHH----ccchHHHHHHH
Confidence 445666778999999999999998888889999999999995 9999999998777662211110 13456777888
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.++|.|...+...+++.|.+++++ +...++ ..+.++|..+++.+.+++. ||+..|.+.++...+
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 183 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNALVSEYAPKRF---------RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLL 183 (398)
T ss_pred HHHhcccccchhhHHHHHHHHcCHHh---------hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHH
Confidence 99999999999999999999876432 233444 6788899999988887765 999999887644444
Q ss_pred HHHH
Q 037418 169 ATLV 172 (427)
Q Consensus 169 ~~ii 172 (427)
..++
T Consensus 184 ~~~~ 187 (398)
T TIGR00895 184 LLLL 187 (398)
T ss_pred HHHH
Confidence 4433
No 23
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=2.9e-10 Score=114.67 Aligned_cols=153 Identities=16% Similarity=0.050 Sum_probs=105.7
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHH-----HHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRA-----AAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKP 78 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A-----~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~ 78 (427)
...+++... .+..|++ ++|.+..++ +.+.+.+.....+..++.|+++||+ |||+.+..+.++..+......
T Consensus 26 ~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~- 102 (408)
T PRK09874 26 TGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMVLMG- 102 (408)
T ss_pred HHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHHHHH-
Confidence 334444445 5666664 588886553 6677777777788889999999995 999999998877766222111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--- 153 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--- 153 (427)
...+.+.++++..+.+++.+. .|...+...|++++++ +....+ ..+.++|.++++.+.+++.
T Consensus 103 ---~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 169 (408)
T PRK09874 103 ---LAQNIWQFLILRALLGLLGGF-VPNANALIATQVPRNK---------SGWALGTLSTGGVSGALLGPLAGGLLADSY 169 (408)
T ss_pred ---HHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 023456677777888887654 4667777778764422 233333 5778899999998888774
Q ss_pred cchhHhHHHHHHHHHHHHHH
Q 037418 154 PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif 173 (427)
||+..|.+.++..+++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~ 189 (408)
T PRK09874 170 GLRPVFFITASVLFLCFLVT 189 (408)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999998887766655443
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=3e-10 Score=118.37 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=112.6
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 93 (427)
...+.+++|.+..+.+.+.+.|......+.+++|+++||+ |||+++.++..+..+. +... ..+.+.+.++.
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~------a~~~~~li~~r 101 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAF------SPTASWLIATR 101 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH------cCCHHHHHHHH
Confidence 3455678999999999999999998888999999999995 9999999999888772 2222 23577888899
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.++|.|+..|...+.+.+.+.+++ + |.+.++ ....++|..+|+.+++++. ||++.|.+.....++
T Consensus 102 ~l~G~g~~~~~~~~~~~l~~~~~~~~--~------r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~ 173 (495)
T PRK14995 102 ALLAIGAAMIVPATLAGIRATFTEEK--Q------RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLV 173 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHH--H------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 99999999999988888877764422 2 344454 7788999999999998885 999999987665555
Q ss_pred HHHHH
Q 037418 169 ATLVF 173 (427)
Q Consensus 169 ~~iif 173 (427)
.+++.
T Consensus 174 ~~~l~ 178 (495)
T PRK14995 174 VMGLT 178 (495)
T ss_pred HHHHH
Confidence 54443
No 25
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.34 E-value=5.4e-10 Score=110.87 Aligned_cols=145 Identities=16% Similarity=0.137 Sum_probs=98.2
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc----cchHHHH-HHHHHHHHHh--hhcCCCCCCCCchhHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI----IGNYWML-LVSSLAYSAV--SYEYKPECIGEGQKIL 88 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~----lGr~~~i-~~g~~~~~~~--~~~~~~~~~~~~~~~~ 88 (427)
...+.+++|+|.++.+..... +..+...++.|.++||+ +||||.+ +.+.++..+. .....++ ..+.+.
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~--~~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~---~~~l~~ 85 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLV--GLPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP---STDLPL 85 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHH--HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc---chhHHH
Confidence 344445789999999888544 33344578999999997 5999985 4555555442 1112211 234444
Q ss_pred HHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---c--------c
Q 037418 89 FYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---P--------W 155 (427)
Q Consensus 89 ~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g--------~ 155 (427)
++....+.+++.+...+...+++.|..++++ |....+ ..+.++|.++++.+++++. | |
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~---------r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEE---------LGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh---------hchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 5555556678888899999999999885432 233333 5788899998888876664 6 9
Q ss_pred hhHhHHHHHHHHHHHHHHH
Q 037418 156 KIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~ 174 (427)
+..|.+.++..+++.++.+
T Consensus 157 r~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988887776654433
No 26
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.33 E-value=5.9e-10 Score=112.51 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=104.0
Q ss_pred HHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhc--C-CCCCCCC
Q 037418 9 AYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYE--Y-KPECIGE 83 (427)
Q Consensus 9 ~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~--~-~~~~~~~ 83 (427)
+..+. .+..|+++++|++..+.+.+.+.+.....++.+++|+++||+ ||||.++.+.....+ ..+. . ..+....
T Consensus 18 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (396)
T TIGR00882 18 MSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFIYVFGPLLQS 96 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 33444 688899999999999999999999999999999999999995 999999887665544 1111 0 0000000
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhHh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIRF 159 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~F 159 (427)
.....+.++..+.+++.+...|...++..|.- ++ +...|+ ....|+|..+++.+++.+. ||+..|
T Consensus 97 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~-------~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f 165 (396)
T TIGR00882 97 NILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS----RN-------SNFEYGKARMFGCVGWALCASIAGILFSIDPQIVF 165 (396)
T ss_pred HHHHHHHHHHHHHHHHhccchhhHHHHHHHhh----hh-------cccccchhhhhcccHHHHHHHHHhhhhccCchHHH
Confidence 01122334455667777777777776655421 11 111233 6778999999999988876 999999
Q ss_pred HHHHHHHHHHHHH
Q 037418 160 GIPAIFTVVATLV 172 (427)
Q Consensus 160 ~i~~v~~~i~~ii 172 (427)
.+.++..++..++
T Consensus 166 ~~~~~~~~~~~~~ 178 (396)
T TIGR00882 166 WLGSGFALILMLL 178 (396)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766655433
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.33 E-value=4.8e-10 Score=113.48 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=106.1
Q ss_pred HhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHH
Q 037418 18 YLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIA 97 (427)
Q Consensus 18 yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~ 97 (427)
.+.+++|.+..+.+...+.+.....+..++.|.++||+ ||||.+.++..+..+...... ...+.+.++....+.+
T Consensus 38 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~----~~~~~~~l~~~~~l~G 112 (406)
T PRK15402 38 AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAIL----LAQSIEQFTLLRFLQG 112 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHH----HHccHHHHHHHHHHHH
Confidence 35578999999999999999888889999999999995 999999999877766221111 0124566777888889
Q ss_pred hhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHH
Q 037418 98 FGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 98 ~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ii 172 (427)
++.+...+...+.+.|.+++++ +.+..+ +...++|..+++.+.+++. ||++.|.+.++..+++.+.
T Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 113 IGLCFIGAVGYAAIQESFEEAD---------AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFG 183 (406)
T ss_pred hHhhhHHHHHHHHHHHHhChhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 9999888888888888876532 223333 4556678888888877664 9999998877776666544
Q ss_pred H
Q 037418 173 F 173 (427)
Q Consensus 173 f 173 (427)
.
T Consensus 184 ~ 184 (406)
T PRK15402 184 L 184 (406)
T ss_pred H
Confidence 3
No 28
>PRK10504 putative transporter; Provisional
Probab=99.32 E-value=9.3e-10 Score=113.58 Aligned_cols=158 Identities=11% Similarity=0.039 Sum_probs=116.8
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+.+-+.++.+. .+-.|. +++|.+..+++.+.+.+.....++.+++|+++||+ ||||.++.+..+..+......
T Consensus 20 ~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~---- 93 (471)
T PRK10504 20 FMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLGSLFCA---- 93 (471)
T ss_pred HHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHH----
Confidence 34445666666 555554 56999999999999888888888999999999995 999999988776665221111
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
...+.+.++++..+.++|.|...|...+.+.|.+++++ +.+.+. ....++|..+++.+.+++. ||+
T Consensus 94 ~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~ 164 (471)
T PRK10504 94 LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ---------YMAAMTFVTLPGQVGPLLGPALGGLLVEYASWH 164 (471)
T ss_pred HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHH
Confidence 02345677788999999999999999999988775422 233444 6777899999998888775 999
Q ss_pred hHhHHHHHHHHHHHHHHHh
Q 037418 157 IRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif~~ 175 (427)
+.|.+......++.+....
T Consensus 165 ~~f~~~~~~~~l~~~~~~~ 183 (471)
T PRK10504 165 WIFLINIPVGIIGAIATLM 183 (471)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999887666555554443
No 29
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=5.8e-10 Score=112.09 Aligned_cols=140 Identities=9% Similarity=-0.071 Sum_probs=97.9
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccch----HHHHHHHHHHHHHhhhcCCCCCCCCchhHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGN----YWMLLVSSLAYSAVSYEYKPECIGEGQKILF 89 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr----~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
.+..|++ ++|.|..+++.+.+++.....++.+++|.++||+ || +|.+.++..+..+..... ..+.+.+
T Consensus 26 ~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l 97 (382)
T PRK11128 26 FWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAVAFWFG------AHSFWLL 97 (382)
T ss_pred hHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHHHHHHh------cccHHHH
Confidence 4667775 5899999999999999999999999999999996 87 344433333222221111 2356777
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHHHHH
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFT 166 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~ 166 (427)
++...+.+++.+...|...++..|. .++.. ++........++|..+|+.+++++. ||+..|.+.++..
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~--------~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~ 168 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTW-QKQIG--------LDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGV 168 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHH-Hhhcc--------CCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 7778888999999999888877764 22111 1111115666899999999998875 9999998777655
Q ss_pred HHHH
Q 037418 167 VVAT 170 (427)
Q Consensus 167 ~i~~ 170 (427)
++..
T Consensus 169 ~~~~ 172 (382)
T PRK11128 169 ASML 172 (382)
T ss_pred HHHH
Confidence 4443
No 30
>PRK12382 putative transporter; Provisional
Probab=99.29 E-value=1.3e-09 Score=109.58 Aligned_cols=141 Identities=11% Similarity=-0.038 Sum_probs=105.7
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-h----hcCCCCCCCCchhHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-S----YEYKPECIGEGQKIL 88 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~----~~~~~~~~~~~~~~~ 88 (427)
.+..|+.+++|.|..+.+.+.+.+.....++.++.|+++||+ ||||.+..+.+...+. + ....+ .....+.+.
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 114 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLAAILP-VSAPFKFAL 114 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHH
Confidence 566788899999999999999999999999999999999995 9999999987776541 1 11110 001234567
Q ss_pred HHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 89 FYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 89 ~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
++++..+.++|.+...|...+.+.|..++++ |.+..+ ..+.++|..+++.+++++. ||+..+.+..
T Consensus 115 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 185 (392)
T PRK12382 115 LVVGRLILGFGESQLLTGALTWGLGLVGPKH---------SGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTM 185 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCccc---------cchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 7888899999999998888888888775432 233333 5777888888888887764 8887666544
Q ss_pred HH
Q 037418 164 IF 165 (427)
Q Consensus 164 v~ 165 (427)
+.
T Consensus 186 ~~ 187 (392)
T PRK12382 186 VL 187 (392)
T ss_pred HH
Confidence 43
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.29 E-value=9.5e-10 Score=110.89 Aligned_cols=143 Identities=10% Similarity=-0.065 Sum_probs=107.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-h-hcCC--CCCCCCchhHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-S-YEYK--PECIGEGQKILF 89 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~-~~~~--~~~~~~~~~~~~ 89 (427)
.+..|+.+++|.+..+++.+.+.+.....++.++.|+++||+ ||||++..+.+++.+. + .... .......+...+
T Consensus 37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 677889999999999999999999999999999999999995 9999999998877651 1 1111 000001234567
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHH
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAI 164 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v 164 (427)
++...+.++|.+...++..+...|.+++++ |.+... ..+.++|..+|+.+++++. ||+..|.++++
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~ 186 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALH---------TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIML 186 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhh---------hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 788889999999999999999989876543 222333 4667778888877777664 89988876655
Q ss_pred HH
Q 037418 165 FT 166 (427)
Q Consensus 165 ~~ 166 (427)
..
T Consensus 187 ~~ 188 (399)
T PRK05122 187 LA 188 (399)
T ss_pred HH
Confidence 43
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.29 E-value=4.9e-10 Score=110.88 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=112.3
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
....++.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+.+.++.++..+...... ...+.+.++++.
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 90 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFG----FSTSLWVMAALW 90 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHH----HhhhHHHHHHHH
Confidence 456788889999999999999999999999999999999995 999999999888776221111 013567788889
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHh-hhhceec---cchhHhHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIAL-IAFPYIK---PWKIRFGIPAIFTV 167 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~-~~~~~l~---g~~~~F~i~~v~~~ 167 (427)
.+.+++.|...|...+++.|.+++++ |...++ ..+.++|..+++ .+...+. ||+..|.+.++..+
T Consensus 91 ~~~g~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 91 ALNGIFQGMGWPPCGRTVTKWFSRSE---------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAI 161 (379)
T ss_pred HHHHhhccccCCchHHHHHHhcCHhh---------heeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence 99999999999999999999886533 233333 567788888887 4444443 89999988777665
Q ss_pred HHHHHHH
Q 037418 168 VATLVFL 174 (427)
Q Consensus 168 i~~iif~ 174 (427)
+..++.+
T Consensus 162 ~~~~~~~ 168 (379)
T TIGR00881 162 IVSLICF 168 (379)
T ss_pred HHHHHHh
Confidence 5444443
No 33
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.28 E-value=5.9e-10 Score=111.25 Aligned_cols=141 Identities=13% Similarity=0.135 Sum_probs=109.5
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHh
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAF 98 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~ 98 (427)
+.+++|.+..+++.+.+.+.....++.+++|+++||+ |||+.+..+.++..+...... ...+.+.+++...+.++
T Consensus 17 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~l~g~ 91 (377)
T PRK11102 17 IAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACA----LAQTIDQLIYMRFLHGL 91 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHH----HHccHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999995 999999999888776222111 01245667778888999
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHH
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif 173 (427)
+.+...+...++..|.+++++ +.+.++ +...++|..+++.+.+++. ||+..|.+.++..++..+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 92 AAAAASVVINALMRDMFPKEE---------FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876432 334444 7888999999998888775 99999988777666655443
No 34
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.27 E-value=1.4e-09 Score=110.01 Aligned_cols=138 Identities=12% Similarity=0.123 Sum_probs=109.9
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHh
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAF 98 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~ 98 (427)
+.+++|.+..+.+...+.+.....+..++.|.++||+ ||||.+..+.++..+...... ...+.+.+++...+.++
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~ 120 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVS----FANSFSLLLIGRACLGL 120 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHH----HHChHHHHHHHHHHHHH
Confidence 4467999999999999999998889999999999995 999999999998877221111 02357788889999999
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
+.|...|...+++.|.+++++ +..... ..+.|+|.++++.+.+++. ||++.|.+.++..++..
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~---------~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRT---------VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999886432 333444 6678999999999988875 99999988776554443
No 35
>PRK03699 putative transporter; Provisional
Probab=99.26 E-value=3e-09 Score=107.43 Aligned_cols=153 Identities=8% Similarity=0.047 Sum_probs=112.0
Q ss_pred HHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCC
Q 037418 5 DIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIG 82 (427)
Q Consensus 5 eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~ 82 (427)
+....+.+..+..-+.+++|+|..+.+.+.+.+.....+..+++|+++||+ ||||++.++.++..+. +...
T Consensus 19 ~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~------ 91 (394)
T PRK03699 19 TGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMF------ 91 (394)
T ss_pred HHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHH------
Confidence 333333444333445678999999999999999988889999999999995 9999999988777662 2212
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cch
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWK 156 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~ 156 (427)
..+.+.++++..+.+++.|...++..+.+.|.+++++ |....+ +...++|..+++.+.+++- ||+
T Consensus 92 ~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~ 162 (394)
T PRK03699 92 SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ---------RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY 162 (394)
T ss_pred cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 2356677788889999999999999999999885432 222333 5677888888887776542 899
Q ss_pred hHhHHHHHHHHHHHHHH
Q 037418 157 IRFGIPAIFTVVATLVF 173 (427)
Q Consensus 157 ~~F~i~~v~~~i~~iif 173 (427)
+.|.+.++..++..++.
T Consensus 163 ~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 163 WVYACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998776665554433
No 36
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.26 E-value=1.1e-09 Score=111.23 Aligned_cols=147 Identities=15% Similarity=0.148 Sum_probs=111.8
Q ss_pred HHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 5 DIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 5 eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
+.+.++.+..+..++.+++|.++.+++.+.+.+.....+..+++|+++||+ |||+++.++.++..+...... ...
T Consensus 30 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~----~~~ 104 (426)
T PRK12307 30 DGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSG----LAS 104 (426)
T ss_pred HHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHH----HHh
Confidence 334443333444566678999999999999999999999999999999995 999999999988877221111 023
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHh
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRF 159 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F 159 (427)
+.+.++++..+.++|.|...+...+++.|.+++++ |....+ ..+.++|.++++.+.+++. ||++.|
T Consensus 105 ~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f 175 (426)
T PRK12307 105 GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL---------KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAF 175 (426)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH---------hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHH
Confidence 56778889999999999999999999999876542 222333 6788899999887777654 999999
Q ss_pred HHHHHH
Q 037418 160 GIPAIF 165 (427)
Q Consensus 160 ~i~~v~ 165 (427)
.++.+.
T Consensus 176 ~i~~~~ 181 (426)
T PRK12307 176 FVGLLP 181 (426)
T ss_pred HHHHHH
Confidence 876544
No 37
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.24 E-value=1.8e-09 Score=108.77 Aligned_cols=141 Identities=13% Similarity=0.088 Sum_probs=104.6
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
..++.+++|.+..+++.+.+.+.....++.++.|+++||+ ||||.+.++..+..+...... ...+.+.++++..+
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~ 105 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVAL----FAHSLTVLIAASAI 105 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHH----HHccHHHHHHHHHH
Confidence 3456678999999999999999999999999999999995 999999998877766221111 02345677788888
Q ss_pred HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 96 i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
.+++.|...+...++..|.+++++ +....+ ..+.++|..+++.+.+++. ||+..|.+.++..++..
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQ---------LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 999988887877778888765422 223333 4667777778877777664 89999998766554443
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.24 E-value=1.8e-09 Score=107.14 Aligned_cols=145 Identities=13% Similarity=0.057 Sum_probs=100.0
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc-
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG- 84 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~- 84 (427)
.+++... .+..|+++++|++..+++.+.+.+.....++++++|+++||+ |||+++.++.++..+...... . ..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~--~--~~~ 89 (366)
T TIGR00886 15 SVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAG--L--AVQ 89 (366)
T ss_pred HHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHH--H--Hhh
Confidence 3444445 444478899999999999999999999999999999999995 999999999888877222111 0 12
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---------
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--------- 153 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--------- 153 (427)
+.+.++++..+.+++.+.. +...++++|.+++++ |....+ ....|+|..+++.+.+.+.
T Consensus 90 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 159 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI---------QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGL 159 (366)
T ss_pred hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh---------hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5667778888889987765 445778888876432 222333 3455666665554443321
Q ss_pred ----cchhHh-HHHHHHH
Q 037418 154 ----PWKIRF-GIPAIFT 166 (427)
Q Consensus 154 ----g~~~~F-~i~~v~~ 166 (427)
+|++.| .+.++..
T Consensus 160 ~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 160 PAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred cccccccchhHHHHHHHH
Confidence 689888 4434333
No 39
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.23 E-value=8.6e-10 Score=109.03 Aligned_cols=146 Identities=13% Similarity=0.049 Sum_probs=107.4
Q ss_pred HHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHH
Q 037418 13 WVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 13 ~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
..+..++.+++|.++.+++.+.+++.....++.++.|+++||+ |||+++.++.++..+...... ...+.+.++++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 97 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYA----IADSLAALYLT 97 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 3577888899999999999999999999999999999999995 999999999888776221111 02356677788
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc-eec--cchhHhHHHHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP-YIK--PWKIRFGIPAIFTV 167 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~-~l~--g~~~~F~i~~v~~~ 167 (427)
..+.++|.|...+...+...+.++++ |..... ..+.++|.++++.+.+ ..+ ||++.|.+.++..+
T Consensus 98 ~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 167 (377)
T TIGR00890 98 YGLASAGVGIAYGIALNTAVKWFPDK----------RGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFL 167 (377)
T ss_pred HHHHhHHHHHHHHhHHHHHHHHcCcc----------cHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 88999999988777777777766432 222233 5667788776443333 333 89999998877766
Q ss_pred HHHHHH
Q 037418 168 VATLVF 173 (427)
Q Consensus 168 i~~iif 173 (427)
+..+..
T Consensus 168 ~~~~~~ 173 (377)
T TIGR00890 168 LVIVLG 173 (377)
T ss_pred HHHHHH
Confidence 655443
No 40
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.22 E-value=5.7e-09 Score=105.54 Aligned_cols=136 Identities=9% Similarity=0.029 Sum_probs=101.4
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLI 96 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 96 (427)
..+.++++.+..+.+.+.+.+.....++.+++|+++||+ ||||+++++..+..+...... + ..+ .++...+.
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~--~--~~~---~~~~r~l~ 98 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLML--F--GIH---PLLAYGLV 98 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHH--H--HHH---HHHHHHHH
Confidence 344578999999999999999999999999999999995 999999999988776211111 0 112 15566789
Q ss_pred HhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhHhHHHHHHHHHH
Q 037418 97 AFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 97 ~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~F~i~~v~~~i~ 169 (427)
++|.|+..|...+++.|.+++++ +.+..+ ....++|..+|+.+++++. .|+..|.+.+...+++
T Consensus 99 G~~~a~~~pa~~a~i~~~~~~~~---------~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 99 GIGAAAYSPAKYGILTELLPGEK---------LVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987543 344444 5667788888988888776 5666666655544433
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.22 E-value=1.9e-09 Score=109.56 Aligned_cols=157 Identities=12% Similarity=0.019 Sum_probs=112.5
Q ss_pred hhHHHHHHhHH---HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-----h
Q 037418 3 WADIFAAYAMW---VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-----Y 74 (427)
Q Consensus 3 ~~eRfs~Yg~~---~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-----~ 74 (427)
+++-++..+.. .....+.++++.+..+++.+.+.+.....+..++.|+++||+ ||||.+..+..+..+.. .
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHH
Confidence 34444555543 334444567888999999999999999999999999999996 99999888776655411 1
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 75 EYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
... ...+.+.+++...+.+++.|...+...+++.|..++++ +.+... +...++|..+|+.+++++
T Consensus 103 ~~~----~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 103 AFL----PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN---------LMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHc----CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH---------HHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 111 02245566677778888888888888888888765432 233333 678899999999988876
Q ss_pred c---cchhHhHHHHHHHHHHHHHH
Q 037418 153 K---PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 153 ~---g~~~~F~i~~v~~~i~~iif 173 (427)
. ||++.|.+.++..+++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 170 IAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHH
Confidence 4 89999988877776655443
No 42
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.20 E-value=8.1e-09 Score=105.64 Aligned_cols=156 Identities=17% Similarity=0.263 Sum_probs=102.5
Q ss_pred hHHHHHHhHHHHHHHhhHhcC---CchHHHHHHHHHHHHHHH---HhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhc
Q 037418 4 ADIFAAYAMWVMITYLTNVWK---ISLVRAAAIVNFFWGTVL---MLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYE 75 (427)
Q Consensus 4 ~eRfs~Yg~~~l~~yl~~~l~---~~~~~A~~~~~~~~~~~y---~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~ 75 (427)
.|.+.+.-+..+..++.++++ .+..+...+...+..... ++.+++|+++||+ ||||++.++..++.+ .+..
T Consensus 33 ~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~ 111 (432)
T PRK10406 33 VEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSLVIA 111 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHh
Confidence 344444443456678888874 555554444455543333 6777899999996 999999999988876 2211
Q ss_pred CCCCCCC--CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhce
Q 037418 76 YKPECIG--EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPY 151 (427)
Q Consensus 76 ~~~~~~~--~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~ 151 (427)
..+.... ......+.+...+.++|.|+..|...++++|.+++++ |....+ +.+.+.|.++++.+...
T Consensus 112 ~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~---------rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 112 CLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR---------KGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred hcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc---------ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111100 0123457788999999999999999999999877542 222223 67788888887655432
Q ss_pred e----------c-cchhHhHHHHHHHHHH
Q 037418 152 I----------K-PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 152 l----------~-g~~~~F~i~~v~~~i~ 169 (427)
+ . ||+..|.+.++..++.
T Consensus 183 ~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 183 LQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 2 2 9999999877655443
No 43
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.20 E-value=4.1e-09 Score=106.05 Aligned_cols=143 Identities=15% Similarity=0.150 Sum_probs=108.2
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLI 96 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 96 (427)
..+.+++|.++.+.+.+.+.+.....++.++.|+++||+ |||+.++++..+..+....... ..+.+.++.+..+.
T Consensus 27 p~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~----~~~~~~~~~~~~l~ 101 (392)
T PRK10473 27 PRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSL----AETSSLFLAGRFLQ 101 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHH----hCcHHHHHHHHHHH
Confidence 344567999999999999998888888899999999995 9999999998877762221110 12455667778889
Q ss_pred HhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHH
Q 037418 97 AFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATL 171 (427)
Q Consensus 97 ~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~i 171 (427)
+++.|...+...+++.|.+++++ |.+..+ +...++|..+++.+.+++. ||+..|.+.++..++..+
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRR---------RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHH
Confidence 99999988888999999876532 344444 6778899888888877763 899999887776655554
Q ss_pred HH
Q 037418 172 VF 173 (427)
Q Consensus 172 if 173 (427)
+.
T Consensus 173 ~~ 174 (392)
T PRK10473 173 LS 174 (392)
T ss_pred HH
Confidence 43
No 44
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=9.4e-09 Score=104.69 Aligned_cols=154 Identities=16% Similarity=0.194 Sum_probs=113.3
Q ss_pred hhHHHHHHhHH-HHHHH--------hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-
Q 037418 3 WADIFAAYAMW-VMITY--------LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV- 72 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~y--------l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~- 72 (427)
++--+.+|++. .+... +.+++|.+..+++..++++.....++.+++|+++||+ |||++++.+..+..+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~ 95 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLAC 95 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHH
Confidence 33345666654 33332 3356899999999999999988889999999999995 9999999998777762
Q ss_pred -hhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhh
Q 037418 73 -SYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAF 149 (427)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~ 149 (427)
+... ..+.+.++++..+.++|.|..-+...+...|.+++++ +.+..+ ..+.++|..+|+.++
T Consensus 96 ~~~~~------a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 96 AATLF------TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK---------GIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred HHHHH------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112 2356678888999999988766666677778776543 222333 677889999998888
Q ss_pred ceec---cchhHhHHHHHHHHHHHHH
Q 037418 150 PYIK---PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 150 ~~l~---g~~~~F~i~~v~~~i~~ii 172 (427)
+++. ||++.|.+.++..+++.+.
T Consensus 161 ~~l~~~~gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 161 AALMHFVHWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 7775 9999999887776666544
No 45
>PRK09848 glucuronide transporter; Provisional
Probab=99.19 E-value=5.2e-09 Score=107.56 Aligned_cols=131 Identities=11% Similarity=0.107 Sum_probs=86.9
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHHH-HHHHHHHHH-hhhcCC-C-CCCCCchh
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWML-LVSSLAYSA-VSYEYK-P-ECIGEGQK 86 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~i-~~g~~~~~~-~~~~~~-~-~~~~~~~~ 86 (427)
.+..|+++.+|++..+++.+.........+..++.|+++||. +||||.. .++.+...+ ...... + ........
T Consensus 30 ~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHH
Confidence 466899999999999999999999999999999999999995 5888855 555554443 111111 1 01111223
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-------HHHHHHHHHHHhhhhcee
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-------FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-------Y~~iNiG~~i~~~~~~~l 152 (427)
+..+....+..++.+++.+...++..+.-.+.+ | |..... ..+.++|..+++.+.+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--~------r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 110 VYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ--S------RARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH--H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334455667788899999888888776654433 3 222221 335567777777666544
No 46
>PRK11043 putative transporter; Provisional
Probab=99.18 E-value=7.9e-09 Score=104.30 Aligned_cols=141 Identities=16% Similarity=0.133 Sum_probs=107.2
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHh
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAF 98 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~ 98 (427)
+.+++|.+..+++.+.+++.....++.++.|+++||+ |||+.+..+..+..+...... . ..+.+.+.++..+.++
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~--~--~~~~~~l~~~~~l~G~ 106 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGML--W--VESAAQLLVLRFVQAV 106 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHH--H--hcCHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999999995 999999998877765221111 0 1245667778888889
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHH
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif 173 (427)
|.+...+...++..|.+++++ +.+.++ ....++|..+++.+.+++. ||+..|.+.++..++..+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 107 GVCSAAVIWQALVIDRYPAQK---------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPT 177 (401)
T ss_pred hhHHHHHHHHHHHHHhcCcHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 888888888888888876532 233444 5567888888888888775 99999988776666555443
No 47
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.18 E-value=8.6e-09 Score=103.65 Aligned_cols=135 Identities=13% Similarity=0.001 Sum_probs=94.2
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH----HHHHHHHHHHHhhhcCCCCCCCCchhHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW----MLLVSSLAYSAVSYEYKPECIGEGQKILF 89 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~----~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
.+..|++ ++|.|.++.+.+.+.+.....+.+++.|.++||+ ||++ .+.++..+..+..... ..+.+.+
T Consensus 26 ~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~l 97 (382)
T TIGR00902 26 FFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAAFSAG------AHNAWLL 97 (382)
T ss_pred HHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHh------hhhHHHH
Confidence 4666774 6899999999999999999999999999999996 8743 3333332222222212 2356777
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHH
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAI 164 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v 164 (427)
++...+.+.+.+...|...++..+ ++ ++ +...+. ....++|..+++.+.+++. ||+..|.+.++
T Consensus 98 ~~~~~l~~~~~~~~~p~~~al~~~-~~----~~------~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~ 166 (382)
T TIGR00902 98 FIAIGLFALFFSAGMPIGDALANT-WQ----KQ------FGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTA 166 (382)
T ss_pred HHHHHHHHHHHccchhHHHHHHHH-HH----HH------cCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 777777888888888887777543 21 11 222343 6788899999998888775 99999987665
Q ss_pred HHH
Q 037418 165 FTV 167 (427)
Q Consensus 165 ~~~ 167 (427)
...
T Consensus 167 ~~~ 169 (382)
T TIGR00902 167 GLA 169 (382)
T ss_pred HHH
Confidence 533
No 48
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.18 E-value=3.8e-09 Score=107.70 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=103.7
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHH-HHHHHHHHHH-hhhc-CCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWM-LLVSSLAYSA-VSYE-YKP 78 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~-i~~g~~~~~~-~~~~-~~~ 78 (427)
.+.+.-+. .+..|+++.+|.+.++++.+..+......+..++.|+++||. +||||. ++++.....+ .+.. ..+
T Consensus 12 ~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~ 91 (437)
T TIGR00792 12 NFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP 91 (437)
T ss_pred HHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC
Confidence 33444444 688899999999999999999999999999999999999984 698775 5566655554 1111 111
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee----
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI---- 152 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l---- 152 (427)
+.........+++...+..++.+++.+...++..|..++ ++| |.+..+ ....++|..++..+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~------R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~ 163 (437)
T TIGR00792 92 DFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLD--PRE------RESLSTFRRFGATLGGLLVAVIVLPLVSYF 163 (437)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCC--HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111112234444556667888888888888888887543 333 333333 456677766554432211
Q ss_pred -----c-cchhHhHHHHHHHHHHHHHH
Q 037418 153 -----K-PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 153 -----~-g~~~~F~i~~v~~~i~~iif 173 (427)
. ||+..|.+.++...+..++.
T Consensus 164 ~~~~~~~g~~~~~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 164 GGGDDKFGWFMFALVLALIGVVSLIIC 190 (437)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 1 78888877776665555443
No 49
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=4.7e-09 Score=105.54 Aligned_cols=144 Identities=11% Similarity=0.142 Sum_probs=109.8
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALG 94 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (427)
+...+.+++|.+.++++.+.+.+.....+..++.|+++||+ |||+++..+..+..+...... ...+.+.++++..
T Consensus 25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~----~~~~~~~l~~~r~ 99 (382)
T PRK10091 25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFT----LSSSYLMLAIGRL 99 (382)
T ss_pred ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHH----HhCcHHHHHHHHH
Confidence 33456678999999999999999999999999999999996 999999999888877222111 0235678888999
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~ 169 (427)
+.+++.|...+...+...|.+++++ +.+... ..+.++|..+++.+++++. ||++.|.+.++..++.
T Consensus 100 l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 170 (382)
T PRK10091 100 VSGFPHGAFFGVGAIVLSKIIKPGK---------VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAV 170 (382)
T ss_pred HHHhhhHHHHHHHHHHHHHhCChHH---------hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHH
Confidence 9999999988888888777664422 233343 4677888888887777664 9999999887765555
Q ss_pred HHH
Q 037418 170 TLV 172 (427)
Q Consensus 170 ~ii 172 (427)
.+.
T Consensus 171 ~~~ 173 (382)
T PRK10091 171 LAS 173 (382)
T ss_pred HHH
Confidence 443
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.17 E-value=1.4e-08 Score=102.62 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=97.0
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHH-HHHhhhHHHHhhhcccchHHHHHHHH-HHHHH--hhhcCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGT-VLMLPLAIQYLVDTIIGNYWMLLVSS-LAYSA--VSYEYKP 78 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~-~y~~~~~GG~laD~~lGr~~~i~~g~-~~~~~--~~~~~~~ 78 (427)
.-+++..... .+..|+++++|.+.++.+.+.+..... ..+.+++||+ +||+ ||||.+++++ ++..+ .+....
T Consensus 26 ~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~~~~~~~~~- 102 (393)
T PRK15011 26 LTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVLACTLFAWN- 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHHHHHHHHHh-
Confidence 3445555666 799999999999999999988766554 4466777777 9996 8888765443 33323 111111
Q ss_pred CCCCCchhHHHH-HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHH-HHHH---HHHHHHHHHHHhhhhceec
Q 037418 79 ECIGEGQKILFY-TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKL-FFFS---FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 79 ~~~~~~~~~~~~-~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~-~~f~---Y~~iNiG~~i~~~~~~~l~ 153 (427)
.+.+.++ .++.+-+.+ +...|...++..|..++++ ++ ..++ ..+.++|.++++.+++++.
T Consensus 103 -----~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~lg~~~g~~i~~~l~ 167 (393)
T PRK15011 103 -----RNYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG---------REAVMFSSFLRAQVSLAWVIGPPLAYALA 167 (393)
T ss_pred -----hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc---------chHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 2333333 333333343 3556667777766443221 22 2232 4678999999999998885
Q ss_pred ---cchhHhHHHHHHHHHHHHHH
Q 037418 154 ---PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 154 ---g~~~~F~i~~v~~~i~~iif 173 (427)
||+..|.+.++..++..+..
T Consensus 168 ~~~gw~~~f~~~~~~~~~~~~~~ 190 (393)
T PRK15011 168 MGFSFTVMYLSAAVAFIVCGVMV 190 (393)
T ss_pred HhcChHHHHHHHHHHHHHHHHHH
Confidence 99999998877655554443
No 51
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.16 E-value=5.9e-09 Score=103.46 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=105.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.+...+.+++|++.++++.+.+.+.....+..++.|+++||+ ||||++.++.++..+ .+... ..+.+.+.++
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~------~~~~~~l~~~ 93 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIRS------APGTALLFAG 93 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHHH------hccHHHHHHH
Confidence 455677889999999999999999999999999999999995 999999998877665 21112 2345667788
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec-----cchhHhHHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK-----PWKIRFGIPAIF 165 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~-----g~~~~F~i~~v~ 165 (427)
..+.++|.|...+..++...|.++++ +.+..+ ..+.++|..+++.+.+.+. +|+..|.+.++.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~ 163 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFPQR----------VGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALP 163 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCcch----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 88999999998888888887766431 233333 5677888888887776654 388888766554
Q ss_pred HHHH
Q 037418 166 TVVA 169 (427)
Q Consensus 166 ~~i~ 169 (427)
.+++
T Consensus 164 ~~~~ 167 (355)
T TIGR00896 164 ALLA 167 (355)
T ss_pred HHHH
Confidence 4443
No 52
>TIGR00898 2A0119 cation transport protein.
Probab=99.15 E-value=6.5e-09 Score=108.30 Aligned_cols=139 Identities=16% Similarity=0.217 Sum_probs=108.6
Q ss_pred hhHhcCCc---hHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh--hcCCCCCCCCchhHHHHHHH
Q 037418 19 LTNVWKIS---LVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS--YEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 19 l~~~l~~~---~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 93 (427)
+.++++++ ..+++.+.+++.....++.++.|+++|| +|||++++++.++..+.. ... ..+.+.+++..
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~r 187 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAF------SPNYTVFLVFR 187 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHH------cccHHHHHHHH
Confidence 34567888 8899999999999999999999999999 599999999988877622 212 23567788899
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceeccchhHhHHHHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVATL 171 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~i 171 (427)
.+.++|.|+..+...+++.|.++++. |..... ..+.++|.++++.++.++.+|++.|.+.++..++..+
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~ 258 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQ---------RAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFL 258 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhh---------hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999886543 222222 5677888888888776666899999888776665554
Q ss_pred HH
Q 037418 172 VF 173 (427)
Q Consensus 172 if 173 (427)
..
T Consensus 259 ~~ 260 (505)
T TIGR00898 259 LS 260 (505)
T ss_pred HH
Confidence 44
No 53
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.14 E-value=1.8e-08 Score=101.11 Aligned_cols=135 Identities=10% Similarity=0.041 Sum_probs=103.7
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIG 82 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~ 82 (427)
...+++..+. .+..|+. ++|.|..+++.+.+.+.....+.+++.|+++||+ ||||.+..+.++..+...... .
T Consensus 17 ~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~----~ 90 (381)
T PRK03633 17 LLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLG----L 90 (381)
T ss_pred HHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH----H
Confidence 4555666666 6666665 6899999999999999999999999999999995 999999999888776222111 0
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
..+.+.++++..+.++|.|...|...+...|..++++ +.+.++ ..+.|+|..+|+.+.+++.
T Consensus 91 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 91 MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN---------RGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2356778888899999999998888777777665432 334444 6788999999999988876
No 54
>PRK10133 L-fucose transporter; Provisional
Probab=99.14 E-value=1.1e-08 Score=105.08 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=97.0
Q ss_pred hhHHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCC
Q 037418 3 WADIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIG 82 (427)
Q Consensus 3 ~~eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~ 82 (427)
+.--++.-....+...+++.+|.++.+++.+...+.....++.++.|.++||+ ||||++.++..++.+......+ +..
T Consensus 36 ~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~-~~~ 113 (438)
T PRK10133 36 FLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWP-AAE 113 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 33334433333455667889999999999999999999999999999999996 9999999999988872211100 000
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAF 149 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~ 149 (427)
..+.+.+++++.+.++|.|...+..+++++|..++ +. +..+.+.++ ....+|..+|+.++
T Consensus 114 a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~-~~-----~~~~~s~~~-~~~~~G~~~g~~~g 173 (438)
T PRK10133 114 IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-SS-----GHFRLNLAQ-TFNSFGAIIAVVFG 173 (438)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCh-hh-----HHHHHHHHH-HHHHHHHHHHHHHH
Confidence 23567888999999999999999999999975322 21 111233443 44456666665543
No 55
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.14 E-value=2.8e-08 Score=101.15 Aligned_cols=133 Identities=13% Similarity=0.195 Sum_probs=100.3
Q ss_pred hHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHH
Q 037418 11 AMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILF 89 (427)
Q Consensus 11 g~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
++. .+...+++++|++..+++.+...+.....++.+++|++.||+ ||||++.+|..++.+......+ .....+.+.+
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~-~~~~~~~~~~ 97 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWP-AAEIMNYTLF 97 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHH-HHhhccHHHH
Confidence 455 677888899999999999999999999999999999999995 9999999999888772221110 0002356778
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l 152 (427)
..+..+.++|.|...+..++++.+..++++.. ++.+.. ....++|..+++.+.+.+
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGPESTAT------RRLNLA-QSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHH------HHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998875443321 122222 567778888887776644
No 56
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.13 E-value=1e-08 Score=117.31 Aligned_cols=135 Identities=11% Similarity=0.038 Sum_probs=95.5
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHH--HHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhcCCCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVR--AAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYEYKPECIG 82 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~--A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~~~~~~~~ 82 (427)
++..++. .+..++...++.+... ++.+.+++.....++++++|+++||+ |||++++++.++..+. +.... +..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~~--~~~ 99 (1146)
T PRK08633 23 FNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIVL--AYY 99 (1146)
T ss_pred HHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 4444445 5666776666665443 57777788888889999999999995 9999999887765541 11000 000
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
..+.+.+++...+.+++.|...|...++++|.+++++ +...++ ..+.++|.++|+.+++++.
T Consensus 100 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 100 LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN---------LSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc---------chhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1346778889999999999999999999999887643 333444 5677888888887777653
No 57
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.12 E-value=2.7e-08 Score=98.86 Aligned_cols=159 Identities=15% Similarity=0.171 Sum_probs=98.3
Q ss_pred hhHHHHHHhHHHHHHHhhHhcCC--chHHHHHHHH--HHHHH---HHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--h
Q 037418 3 WADIFAAYAMWVMITYLTNVWKI--SLVRAAAIVN--FFWGT---VLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--S 73 (427)
Q Consensus 3 ~~eRfs~Yg~~~l~~yl~~~l~~--~~~~A~~~~~--~~~~~---~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~ 73 (427)
++|-+..+....+..|+.++... ++++.+.+.+ .+... ..++.++.|+++||+ ||||++.++.++..+. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHH
Confidence 34544454444556666666443 3444433333 22221 124678899999995 9999999998888762 2
Q ss_pred hcCCCCCCC--CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhh
Q 037418 74 YEYKPECIG--EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAF 149 (427)
Q Consensus 74 ~~~~~~~~~--~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~ 149 (427)
....+.... ......++++..+.++|.|...+...+++.|.+++++ |..... ..+.++|.++++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK---------RGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc---------chHHHHHHHHHHHHHHHHHHHHH
Confidence 222211100 0112356678889999999999999999999876543 222222 677788888777654
Q ss_pred cee---------c--cchhHhHHHHHHHHHHHH
Q 037418 150 PYI---------K--PWKIRFGIPAIFTVVATL 171 (427)
Q Consensus 150 ~~l---------~--g~~~~F~i~~v~~~i~~i 171 (427)
..+ + ||++.|.+.++..+++..
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 432 2 899999887766555443
No 58
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.12 E-value=2.2e-08 Score=102.06 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=104.8
Q ss_pred CchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhc-CCCCCCCCchhHHHHHHHHHHHhhccc
Q 037418 25 ISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYE-YKPECIGEGQKILFYTALGLIAFGMSG 102 (427)
Q Consensus 25 ~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~li~~g~g~ 102 (427)
.+..+++.+.+.+.....++.++.|+++||+ |||++++++.++..+. +.. ..+ ...+.+.++++..+.++|.|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~ 143 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA---FALSVEMLIVGRVLLGIGVGI 143 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc---cccchHHHHHHHHHHHhhhhH
Confidence 3489999999999999999999999999995 9999999998887762 111 111 122345788899999999999
Q ss_pred ccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhh---ceec---cchhHhHHHHHHHHHHHHHH
Q 037418 103 HLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAF---PYIK---PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 103 ~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~---~~l~---g~~~~F~i~~v~~~i~~iif 173 (427)
..+...++++|.+++++ |..... +.+.++|.++++.+. .... ||++.|.+.++..++..+..
T Consensus 144 ~~~~~~~~i~~~~~~~~---------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 144 ASALVPMYLSEIAPKAL---------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHhHHHHHHHccCChhh---------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999886543 233333 678899999999988 5543 99999998766665554443
No 59
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.11 E-value=1.1e-08 Score=105.50 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=106.2
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcc
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMS 101 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g 101 (427)
+++++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..+...... .....+.+.+++...+.+++.|
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~~~G~~~~ 146 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIP--WAAGGGIALVVFCRVIQGLAQG 146 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHH--HHHHcCchHHHHHHHHHHHhcc
Confidence 5789999999999999999999999999999995 999999999877665211110 0001234567788899999999
Q ss_pred cccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHHHHH
Q 037418 102 GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 102 ~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~iif 173 (427)
..-|....+..|.+++++ |..... +.+.++|.++++.+++++. ||+..|.+.++..++..+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 147 SVSPATHKIIVKWAPPKE---------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred cchhhHHHHHHhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH
Confidence 999999999999876432 333444 6778999999998888764 89999998877655544433
No 60
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=4.1e-08 Score=98.50 Aligned_cols=147 Identities=16% Similarity=0.070 Sum_probs=104.2
Q ss_pred HHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-hcCCCCCCCCchh
Q 037418 8 AAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-YEYKPECIGEGQK 86 (427)
Q Consensus 8 s~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-~~~~~~~~~~~~~ 86 (427)
+++........+.+++|.+.++.+.+.+.+.....++.+.+|+++||+ |||+++..+........ .... ..+.
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~-----~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLD-----PFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHH-----hccH
Confidence 445555334556678999999999999999988889999999999996 98887655444333321 1111 1356
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGI 161 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i 161 (427)
..+.++..+.++|.|.. ++..+..+|.+++++ |.+..+ ..+.++|..+++.+++++. ||+..|.+
T Consensus 80 ~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~---------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~ 149 (368)
T TIGR00903 80 EWLLACQLLAALGQPFL-LNAFAPAASQIREER---------RDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIP 149 (368)
T ss_pred HHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 77888999999999864 444455577665421 344444 6888999999999988885 99999987
Q ss_pred HHHHHHHHH
Q 037418 162 PAIFTVVAT 170 (427)
Q Consensus 162 ~~v~~~i~~ 170 (427)
.++.-++..
T Consensus 150 ~~~l~~~~~ 158 (368)
T TIGR00903 150 IAAVAAAGI 158 (368)
T ss_pred HHHHHHHHH
Confidence 555443333
No 61
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.11 E-value=8.6e-09 Score=117.94 Aligned_cols=125 Identities=13% Similarity=0.072 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHH---H-hhhcCCCCCCCCchhHHHHHHHHHHHhhcccccc
Q 037418 30 AAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYS---A-VSYEYKPECIGEGQKILFYTALGLIAFGMSGHLV 105 (427)
Q Consensus 30 A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~---~-~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~ 105 (427)
.+...+++.....++.+++|+++||+ ||||++........ + .+.... ..+.+.++++..+.+++.+++.|
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH-----LNSVPLLFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHhhch
Confidence 45555667677778889999999996 99997643222111 1 111111 13577888999999999999999
Q ss_pred cccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHH
Q 037418 106 SIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 106 ~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~ 169 (427)
...+++.|.+++++ +....+ .++.++|.++|+.+++++. ||+..|.+.++..+++
T Consensus 128 ~~~a~l~~~~~~~~---------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~ 187 (1140)
T PRK06814 128 IKYSILPDHLNKDE---------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG 187 (1140)
T ss_pred HHHHhhHhhcCccc---------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 99999999997653 233444 7899999999999999885 8988884444443333
No 62
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.10 E-value=1.9e-08 Score=104.44 Aligned_cols=146 Identities=14% Similarity=0.196 Sum_probs=112.0
Q ss_pred HHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchh
Q 037418 7 FAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQK 86 (427)
Q Consensus 7 fs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 86 (427)
+.++.+..+..++.+++|.+..+++.+.+.+.....++.+++|+++||+ |||++++++.++..+...... ...+.
T Consensus 34 ~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~~~~ 108 (496)
T PRK03893 34 FDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFSVGTLACG----FAPGY 108 (496)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHH----HHhHH
Confidence 3343333455677788999999999999999998899999999999996 999999999877766222111 02356
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGI 161 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i 161 (427)
+.++++..+.+++.|+..+...+++.|.+++++ +...+. +.+.++|.++++.+.+++. ||++.|.+
T Consensus 109 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 109 WTLFIARLVIGMGMAGEYGSSATYVIESWPKHL---------RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 778888999999999999999999999886532 233333 6788999999998888765 89999987
Q ss_pred HHHHH
Q 037418 162 PAIFT 166 (427)
Q Consensus 162 ~~v~~ 166 (427)
.++..
T Consensus 180 ~~~~~ 184 (496)
T PRK03893 180 GILPI 184 (496)
T ss_pred HHHHH
Confidence 55443
No 63
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.10 E-value=1.9e-08 Score=105.26 Aligned_cols=161 Identities=16% Similarity=0.089 Sum_probs=119.2
Q ss_pred hhhHHHHHHhHH---H-HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhh
Q 037418 2 FWADIFAAYAMW---V-MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSY 74 (427)
Q Consensus 2 ~~~eRfs~Yg~~---~-l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~ 74 (427)
+.++-+|..|.. + +..|++ ++.-|....+.+..+...-..++.+++|.++||+ .|||.++.+.++..+ .+.
T Consensus 16 w~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 16 WIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHH
Confidence 455666666665 2 444444 5677777788877777778889999999999996 999999999887765 122
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 75 EYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
.+. .....+.+.+++...+++++.++..|.-.+.+.+..++++ +.+..+ -...|+.-.+||.+++.+
T Consensus 94 ~l~--~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~---------L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 94 VLA--FFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED---------LPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHH--HhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh---------HHHHHHHHHHHHHHHHhccchHHHHH
Confidence 111 0113467788888899999999999999999999887654 333333 677888888998888876
Q ss_pred c---cchhHhHHHHHHHHHHHHHHHh
Q 037418 153 K---PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 153 ~---g~~~~F~i~~v~~~i~~iif~~ 175 (427)
- |-.+.|.+.+++.++++..+..
T Consensus 163 va~~G~~~~f~inalsfl~~i~~l~~ 188 (524)
T PF05977_consen 163 VAFFGAAAAFLINALSFLISILALLR 188 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 8888999999888776655443
No 64
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.10 E-value=4.2e-11 Score=119.37 Aligned_cols=140 Identities=14% Similarity=0.223 Sum_probs=116.6
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcc
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMS 101 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g 101 (427)
.+|.++.+.+.+-.+|.....++.++.|++|||| .|++.+.+|..+-.+...+.. ...+.|.+.+...++++|-+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~----fs~~Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASG----FSNHFWQVLLCRGFVGIGEA 136 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHH----HHHHHHHHHHHHHHhccchh
Confidence 4799999999999999999999999999999998 999999999877766222111 02468889999999999999
Q ss_pred cccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHHH-HHH
Q 037418 102 GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVATL-VFL 174 (427)
Q Consensus 102 ~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~i-if~ 174 (427)
...|...++++|.++++. |.+.|. |+++++|+.+|...+.++. .|+++|...++.+++..+ +++
T Consensus 137 s~~~ia~s~IaD~f~~~~---------Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~ 207 (493)
T KOG1330|consen 137 SYSPIAPSLIADSFPDDK---------RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFL 207 (493)
T ss_pred hhcccchhHhhhcCcchh---------hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHh
Confidence 999999999999998754 566776 9999999999999988887 499999988777765554 444
Q ss_pred h
Q 037418 175 S 175 (427)
Q Consensus 175 ~ 175 (427)
+
T Consensus 208 f 208 (493)
T KOG1330|consen 208 F 208 (493)
T ss_pred h
Confidence 3
No 65
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.09 E-value=1.8e-08 Score=101.86 Aligned_cols=137 Identities=16% Similarity=0.107 Sum_probs=103.2
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 93 (427)
..-+.+++|.|+.+++.+.+.+....-++.++.|+++||+ ||||++..+..+..+. +.... .+.+.++++.
T Consensus 32 lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a------~~~~~ll~~r 104 (393)
T PRK09705 32 LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY------PQSALLLSSA 104 (393)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC------cchHHHHHHH
Confidence 3456678999999999999999999999999999999995 9999999999998872 22222 3566778899
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTV 167 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~ 167 (427)
.+.++|.|...+.....+.|.++++ +..... ..+.++|..+++.+.+++. +|+..|.+-++..+
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~~~----------~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~ 174 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQQR----------TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAV 174 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHcccc----------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 9999999999999999988877522 122222 3456777777777766653 78887765444433
Q ss_pred HH
Q 037418 168 VA 169 (427)
Q Consensus 168 i~ 169 (427)
+.
T Consensus 175 ~~ 176 (393)
T PRK09705 175 VA 176 (393)
T ss_pred HH
Confidence 33
No 66
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.07 E-value=4.7e-08 Score=99.46 Aligned_cols=144 Identities=11% Similarity=0.116 Sum_probs=110.4
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-h-hcCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-S-YEYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 91 (427)
....++.+++|++..+.+.+.+++....-++.+++|+++||+ ||||++..+.++..+. + ... ..+.+.+++
T Consensus 29 ~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~------~~~~~~l~~ 101 (412)
T TIGR02332 29 FAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMF------ATGPESLYL 101 (412)
T ss_pred HHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHH------hcCHHHHHH
Confidence 355678899999999999999999999999999999999995 9999999998887762 2 112 234667888
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee-------c--cchhHhH
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI-------K--PWKIRFG 160 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l-------~--g~~~~F~ 160 (427)
+..+.++|.|..-|...++..|.+++++ |..... ..+.++|..+++.+++++ + ||++.|.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~---------rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~ 172 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYF---------RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFL 172 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHH
Confidence 9999999999999988888888876532 222333 457778888887776654 2 9999999
Q ss_pred HHHHHHHHHHHHH
Q 037418 161 IPAIFTVVATLVF 173 (427)
Q Consensus 161 i~~v~~~i~~iif 173 (427)
+.++..++..++.
T Consensus 173 ~~~~~~l~~~~~~ 185 (412)
T TIGR02332 173 LEGFPSVILGVMT 185 (412)
T ss_pred HHHHHHHHHHHHH
Confidence 8776655444333
No 67
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.06 E-value=3.6e-08 Score=102.32 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=101.1
Q ss_pred hHHHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCC
Q 037418 4 ADIFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 4 ~eRfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~ 83 (427)
..-++.++...+..++.+++|++..+++.+...+.....++.+++|+++||+ |||+++..+.++..+....... .
T Consensus 47 ~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~----~ 121 (476)
T PLN00028 47 TCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSL----V 121 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHH----h
Confidence 3334444444555678889999999999888777777778889999999995 9999999888777662211110 1
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee---------
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI--------- 152 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l--------- 152 (427)
.+.+.+++...+.++|.+..-+ ....+++.++++. |..... +...|+|..+++.+.+.+
T Consensus 122 ~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~---------rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 122 SSATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI---------VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred cCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh---------eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2455666777778888776543 3456677775432 223333 344566766665444332
Q ss_pred ---ccchhHhHHHHHHHHHHHHH
Q 037418 153 ---KPWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 153 ---~g~~~~F~i~~v~~~i~~ii 172 (427)
.||++.|.+.++..++..+.
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHH
Confidence 17999999887766554433
No 68
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.05 E-value=8.8e-08 Score=103.85 Aligned_cols=144 Identities=14% Similarity=0.080 Sum_probs=105.7
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~ 91 (427)
.+..++.+++|.+..+++.+.+++.....++.+++|+++||+ |||++++++.++..+. +..+ ..+.+.+++
T Consensus 188 ~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~af------a~s~~~llv 260 (742)
T TIGR01299 188 FVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSF------VQGYGFFLF 260 (742)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHH------HhhHHHHHH
Confidence 455667778999999999999999999999999999999995 9999999998777662 2112 134677888
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee--------------c--
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI--------------K-- 153 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l--------------~-- 153 (427)
+..+.++|.|+..|...++++|.++++. |...+. .....+|.++++.++..+ .
T Consensus 261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~---------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~ 331 (742)
T TIGR01299 261 CRLLSGFGIGGAIPIVFSYFAEFLAQEK---------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFH 331 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccc
Confidence 9999999999999999999999876532 222333 345566666665432111 1
Q ss_pred cchhHhHHHHHHHHHHHHHH
Q 037418 154 PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif 173 (427)
+|++.|.++++..+++++.+
T Consensus 332 gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 332 SWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 78888888777666555443
No 69
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.05 E-value=5.9e-08 Score=100.12 Aligned_cols=161 Identities=16% Similarity=0.098 Sum_probs=113.2
Q ss_pred HhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhc---ccchHHHHHHHHHH-HHHhhhcC--CCCC-
Q 037418 10 YAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDT---IIGNYWMLLVSSLA-YSAVSYEY--KPEC- 80 (427)
Q Consensus 10 Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~---~lGr~~~i~~g~~~-~~~~~~~~--~~~~- 80 (427)
|+.+ .+..|+ +.+|.+...++.+..+......+..++.|+++|| .+||||..+++..+ ..+.+..+ .++.
T Consensus 20 ~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 20 WALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 4454 566665 6799999999999999999999999999999996 57999998876433 33321111 1100
Q ss_pred -------CCC---chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhh
Q 037418 81 -------IGE---GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIA 148 (427)
Q Consensus 81 -------~~~---~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~ 148 (427)
+.. ...+.+.+++.+.-++.....+...++++|..++++.+ .+..+. .+..|+|..+|+.+
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~-------~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR-------TRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH-------HHHHHHHHHHHHHHHHHHHHHH
Confidence 000 11134456677777888888888899999999876432 123333 67889999999887
Q ss_pred hcee--------------c----cchhHhHHHHHHHHHHHHHHHhccc
Q 037418 149 FPYI--------------K----PWKIRFGIPAIFTVVATLVFLSGTC 178 (427)
Q Consensus 149 ~~~l--------------~----g~~~~F~i~~v~~~i~~iif~~~~~ 178 (427)
+++. + +++..|.++++.++++.++-+..-|
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~ 219 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVK 219 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 7653 0 5678899999998888877665433
No 70
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.05 E-value=2.8e-08 Score=102.54 Aligned_cols=145 Identities=11% Similarity=0.051 Sum_probs=100.8
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHH-HH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTA-LG 94 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 94 (427)
...+.+++|.+..+++.+.+.+....++..+++|+++||+ |||++++.+.++..+...... ...+.+.++.. ..
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~ 116 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILAS----FSSNVIELYLTAGF 116 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHH----HhhhHHHHHHHHHH
Confidence 3445578999999999999999888888899999999995 999999988877665211111 01234444433 35
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~ 169 (427)
+.++|.|..-+...+.+.+.+++ + |..... +.+.++|..+++.+.+++. ||++.|.+.++..+++
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~~----~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~ 186 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFYR----R------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHC 186 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHHh----h------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 66888887544445666676521 1 223333 6788888888888777665 9999999988877666
Q ss_pred HHHHHh
Q 037418 170 TLVFLS 175 (427)
Q Consensus 170 ~iif~~ 175 (427)
.+..++
T Consensus 187 ~v~~~~ 192 (455)
T TIGR00892 187 CVCGAL 192 (455)
T ss_pred HHHHHH
Confidence 554443
No 71
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.04 E-value=6.3e-08 Score=99.99 Aligned_cols=141 Identities=9% Similarity=0.024 Sum_probs=102.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-h-hcC---C--CCC-CCCchhHHHHHHHH
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-S-YEY---K--PEC-IGEGQKILFYTALG 94 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~-~~~---~--~~~-~~~~~~~~~~~~l~ 94 (427)
++.+..+++.+.+.+.....++++++|+++||+ ||||+++++..++.+. + ... . +.. .+....+.++++..
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRI 128 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHH
Confidence 488999999999999999999999999999995 9999999998887661 1 111 0 000 01122456678999
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhce---------ec--cchhHhHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPY---------IK--PWKIRFGI 161 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~---------l~--g~~~~F~i 161 (427)
+.++|.|+.-|...++++|.+++++ |..... -.+..+|.++++.++.. ++ ||++.|.+
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~---------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~ 199 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHI---------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFAS 199 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhh---------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHH
Confidence 9999999999999999999987542 222333 45667777776655432 22 89999998
Q ss_pred HHHHHHHHHHHH
Q 037418 162 PAIFTVVATLVF 173 (427)
Q Consensus 162 ~~v~~~i~~iif 173 (427)
.++..++..+..
T Consensus 200 ~~~~~~~~~~~~ 211 (479)
T PRK10077 200 EAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHH
Confidence 877766655433
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.03 E-value=6.2e-08 Score=98.86 Aligned_cols=152 Identities=9% Similarity=0.080 Sum_probs=92.7
Q ss_pred HHHhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCC
Q 037418 8 AAYAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGE 83 (427)
Q Consensus 8 s~Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~ 83 (427)
.-||+. .+..|+++++|++..+.+.+.+.+.....++++++|.++||+-|||+++.++.++..+. +... .
T Consensus 16 ~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~------~ 89 (418)
T TIGR00889 16 FIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ------V 89 (418)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH------h
Confidence 334555 68999999999999999999999999999999999999999645577877777666442 2112 1
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec-cc-hhHhHH
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK-PW-KIRFGI 161 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~-g~-~~~F~i 161 (427)
.+.+.+++.+.+.+++.+...|-..++..+...+...+. .+.-.+.+.+ -++|.++|+.+++.++ .+ +..|.+
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~r~~----G~lG~~ig~~l~g~l~~~~~~~~f~~ 164 (418)
T TIGR00889 90 TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDV-VTDFPPIRVM----GTIGFIAAMWAVSLLDIELSNIQLYI 164 (418)
T ss_pred cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCc-hhcCCCeeee----hhHHHHHHHHHHHHhcccchhHHHHH
Confidence 234555556666666666555555444322221110000 0000012222 2467778877777665 22 344666
Q ss_pred HHHHHHHHH
Q 037418 162 PAIFTVVAT 170 (427)
Q Consensus 162 ~~v~~~i~~ 170 (427)
.++..++..
T Consensus 165 ~~~~~~~~~ 173 (418)
T TIGR00889 165 TAGSSALLG 173 (418)
T ss_pred HHHHHHHHH
Confidence 555555444
No 73
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.02 E-value=5.9e-08 Score=99.40 Aligned_cols=140 Identities=10% Similarity=0.059 Sum_probs=106.8
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLI 96 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 96 (427)
..+.+++|++..+++.+.+.+.....++.+++|+++||+ |||+.+.++.++..+...... ...+.+.+++...+.
T Consensus 47 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~l~ 121 (434)
T PRK11663 47 PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFG----FSSSLWAFALLWVLN 121 (434)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHH----HHhHHHHHHHHHHHH
Confidence 344457999999999999999999999999999999996 999999999888776222111 023456666677778
Q ss_pred HhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 97 AFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 97 ~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
+++.|...+...+.+.|.+++++ +..... +.+.++|..+++.+.+++. ||++.|.+.++..++..
T Consensus 122 g~~~g~~~~~~~~~~~~~~~~~~---------rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYSRTE---------RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred HHHHHccchHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 88888888889999999886532 233433 6778899999988877765 99999998776554443
No 74
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.97 E-value=2.7e-07 Score=95.00 Aligned_cols=144 Identities=13% Similarity=0.088 Sum_probs=102.8
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhh--cCCCCCCCCchhHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSY--EYKPECIGEGQKILFYTA 92 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 92 (427)
...|+.++ |.+..+.+.+.+.+.....++.+++|+++||+ |||++++++.++..+... .+.+. ...+.+.+++.
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~ 126 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW--ATSSIAVMFVL 126 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc--ccccHHHHHHH
Confidence 44677777 99999999999999999999999999999996 999999999887766211 11110 01245566777
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHH-HHHhhhhcee--c-cchhHhHHHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVP-IIALIAFPYI--K-PWKIRFGIPAIFT 166 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~-~i~~~~~~~l--~-g~~~~F~i~~v~~ 166 (427)
..+.+++.|...|.......|.+++++ +....+ +.+.++|. +++++....+ . ||+++|.+.++..
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~---------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~ 197 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKE---------RGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAA 197 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHH---------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 888899999988888888888775432 233444 57778775 4455432222 2 9999999877666
Q ss_pred HHHHH
Q 037418 167 VVATL 171 (427)
Q Consensus 167 ~i~~i 171 (427)
++..+
T Consensus 198 ~~~~~ 202 (452)
T PRK11273 198 ILVAL 202 (452)
T ss_pred HHHHH
Confidence 55433
No 75
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.95 E-value=8e-07 Score=89.99 Aligned_cols=133 Identities=8% Similarity=0.028 Sum_probs=93.6
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-h--hcCCCCCCCCchhHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-S--YEYKPECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~--~~~~~~~~~~~~~~~~~ 90 (427)
.+..|+ +++|.+..+++.+.+.+.....++.++.|.++||+ ||||.+..+..+..+. + ..... . ..+.+.++
T Consensus 35 ~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~l~ 109 (402)
T TIGR00897 35 WLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLLWCVGHAAFIVFGL-G--HANYPLIL 109 (402)
T ss_pred hHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhc-c--CccHHHHH
Confidence 466677 56899999999999999999999999999999995 9999999998887662 1 11110 0 12455666
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHH-HHHhhhhceec---cchhHhH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVP-IIALIAFPYIK---PWKIRFG 160 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~-~i~~~~~~~l~---g~~~~F~ 160 (427)
+...+.++|.+..-+...+.+.+.+++++ +.+..+ ..+.++|. .+++.+.+++. ||+..+.
T Consensus 110 ~~~~i~G~g~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~ 176 (402)
T TIGR00897 110 LFYGIRGLGYPLFAYSFLVWVVYNTKQDN---------LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLW 176 (402)
T ss_pred HHHHHHHcchHHHHhHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHH
Confidence 67777888888877777777777665432 233333 56778886 56777776654 6544433
No 76
>PRK09669 putative symporter YagG; Provisional
Probab=98.95 E-value=1.3e-07 Score=97.09 Aligned_cols=149 Identities=13% Similarity=0.142 Sum_probs=92.9
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHHHH-HHHHHHHHhh-hcC-CCCCCCCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWMLL-VSSLAYSAVS-YEY-KPECIGEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~i~-~g~~~~~~~~-~~~-~~~~~~~~~~~ 87 (427)
-+..|+++.+|++.+.++.+..+...+.-+..++.|+++||. +||||..+ ++.+...+.. ... .|........+
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 467888999999999999999999999999999999999993 58866644 5555554411 111 12111122233
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc----eec------cc
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP----YIK------PW 155 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~----~l~------g~ 155 (427)
.+++...+..++..++.....++.+|..++ ++| |.+..+ ....|+|..+++.+.. ++. ||
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~--~~e------R~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~ 182 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITND--PRE------RHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGY 182 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCC--HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhH
Confidence 344444455666667777778899886544 333 333333 5566777666654322 221 56
Q ss_pred hhHhHHHHHHHHHHH
Q 037418 156 KIRFGIPAIFTVVAT 170 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~ 170 (427)
+..+.+.++...+..
T Consensus 183 ~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 183 FYAMMVMGLLGVVLF 197 (444)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666655555544443
No 77
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.93 E-value=7.4e-08 Score=99.63 Aligned_cols=143 Identities=13% Similarity=-0.092 Sum_probs=103.6
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh---hhcCCCCCCCCchhHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV---SYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 92 (427)
...+.+++|.+.++.+.+.+.+....-++.+++|+++||+ ||||.+.++.++..+. +..+. +....+.+.+++.
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~ 128 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASL--GSGSVSLGLMIAL 128 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHH--hcccchHHHHHHH
Confidence 4556778999999999999999888889999999999996 9999998887665541 11110 1112456778888
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec------cchhHhHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK------PWKIRFGIPAI 164 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~------g~~~~F~i~~v 164 (427)
..+.++|.|..-|...+.++|.+++++ |..... -.+.++|..+++.+..++. +|+..|.+.++
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~---------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRK---------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccc---------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 889999999999999999999887643 222333 3567788877766654332 57778887665
Q ss_pred HHHHHH
Q 037418 165 FTVVAT 170 (427)
Q Consensus 165 ~~~i~~ 170 (427)
..++..
T Consensus 200 ~~~~~~ 205 (467)
T PRK09556 200 IALIIG 205 (467)
T ss_pred HHHHHH
Confidence 554433
No 78
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.92 E-value=5.1e-08 Score=104.34 Aligned_cols=312 Identities=10% Similarity=-0.116 Sum_probs=227.0
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCC-CCCCC---CchhHHHHHHHHHHHh
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYK-PECIG---EGQKILFYTALGLIAF 98 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~-~~~~~---~~~~~~~~~~l~li~~ 98 (427)
.+.....++...+++..+.+++++.+.+.||-..|+..+...-.+.+++...+.. ..... ..+.......+..+++
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL 94 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL 94 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence 3445567888999999999999999999999999999999988888887776554 11100 0112234568888999
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHH-HHHHHhhhhceeccchh-----------HhHHHHHHH
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVL-VPIIALIAFPYIKPWKI-----------RFGIPAIFT 166 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNi-G~~i~~~~~~~l~g~~~-----------~F~i~~v~~ 166 (427)
+.++.+++.+++.++|.+..++ +++++.++++.... +.-+|.+++..+.+|-. -++..++.+
T Consensus 95 ia~G~GgiKp~vsaf~gdqf~~------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGDQFEE------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHhhccccccCchhhhHhhcCc------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 9999999999999999877653 24345555777643 33345566665556654 123667777
Q ss_pred HHHHHHHHhcccceeecCCCCChhHHHHHHHHHHHhhccCCCCCCCccccccCCcccccccccCCCcchhhhhhccCCCc
Q 037418 167 VVATLVFLSGTCSYRRRKPLGSPLTTVFRVFVASALKLFYRIPRNASELYERDNVDEIYVVQHTRSLRCLDKAAIILPDK 246 (427)
Q Consensus 167 ~i~~iif~~~~~~~~~~~p~g~pl~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~ 246 (427)
++.++.++.....++..++.+.+...+.++.+.....++.+ ... .+..
T Consensus 169 i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~-------------------~~~------~~~~------- 216 (654)
T TIGR00926 169 ILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKR-------------------FST------RSEH------- 216 (654)
T ss_pred HHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHh-------------------hcc------CCcc-------
Confidence 88888888887766666666555445555554444332110 000 0000
Q ss_pred cchhccCCcccc--cchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHHHhcCCCCCceecccchhhhhhHHHH
Q 037418 247 TLEQQEGNRWRL--CRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQADHLNRKVGKLSVPLPILLLFYDIART 324 (427)
Q Consensus 247 ~~~~~~~~~~~~--~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~~~d~~~~~~~ip~~~~~~~n~i~ii 324 (427)
....|.. ....++++++...++++++...+.+|+.+.|....++.|+.++|+..+.+...+...+.++++-.+
T Consensus 217 -----~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L 291 (654)
T TIGR00926 217 -----WPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDGDVGGFEIQPDQMQVVNPL 291 (654)
T ss_pred -----cchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcCccCCEecCHHHHHHHHHH
Confidence 0011211 123345678999999999999999999999999999999999999877777777788899999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037418 325 QFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIR 377 (427)
Q Consensus 325 ~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~ 377 (427)
.++|+...+-+++..++++.-.+++++.-+.+.++++++.+++.+..+.+.-+
T Consensus 292 ~IIil~Pi~~~~lyp~l~~~~~~ls~l~k~~iG~~la~la~~va~~ve~~~~~ 344 (654)
T TIGR00926 292 LILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQLKVNP 344 (654)
T ss_pred HHHHhHHHHHHhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999996666678899999999999999999999987766544
No 79
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.91 E-value=2.8e-07 Score=95.59 Aligned_cols=127 Identities=13% Similarity=0.103 Sum_probs=84.1
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhc---ccchHHH-HHHHHHHHHHhhh-cCCCC-CCCCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDT---IIGNYWM-LLVSSLAYSAVSY-EYKPE-CIGEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~---~lGr~~~-i~~g~~~~~~~~~-~~~~~-~~~~~~~~ 87 (427)
-+..|+++.+|++...++.+..+...+.-+..++.|+++|| .+||||. +++|.+.+.+... ...++ ........
T Consensus 28 ~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~ 107 (473)
T PRK10429 28 YLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYV 107 (473)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHH
Confidence 57899999999999999999999999999999999999994 2598554 4556655555221 12211 11111233
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhh
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIA 148 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~ 148 (427)
.+.+...+..++..++.....++++|.-++ ++| |.+.++ ....|+|.++...+
T Consensus 108 ~~~~~~~l~~~~~t~~~ip~~al~~~lt~~--~~e------R~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 108 FVCVTYILWGMTYTIMDIPFWSLVPTLTLD--KRE------REQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred HHHHHHHHHHHHHHHHcchHHhhhHHhCCC--HHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 333445566778888888889999886544 333 344444 45567775554433
No 80
>PRK09952 shikimate transporter; Provisional
Probab=98.91 E-value=1.6e-06 Score=88.96 Aligned_cols=117 Identities=12% Similarity=0.143 Sum_probs=76.7
Q ss_pred HhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCC--CchhHHHHHHHHHHHhhcccccccccchhcccCCcc
Q 037418 43 MLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIG--EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDS 118 (427)
Q Consensus 43 ~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~--~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~ 118 (427)
+..++.|+++||+ |||+++.++.++..+. +..+.++... ......+.+...+.++|.|+.-|...+++.|.++++
T Consensus 79 ~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 157 (438)
T PRK09952 79 LGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN 157 (438)
T ss_pred hHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC
Confidence 4556679999995 9999999998888772 2222221100 001224667889999999999999999999987653
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee----------c-cchhHhHHHHHHHH
Q 037418 119 RAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI----------K-PWKIRFGIPAIFTV 167 (427)
Q Consensus 119 ~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l----------~-g~~~~F~i~~v~~~ 167 (427)
+ |....+.. ..+.++|.+++..+..++ . ||+..|.+.++..+
T Consensus 158 ~------rg~~~~~~-~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 158 K------KAFYSSGV-QVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred C------CcHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 2 11111112 567777777765443322 2 89999998776543
No 81
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.88 E-value=5.6e-07 Score=92.23 Aligned_cols=146 Identities=14% Similarity=0.106 Sum_probs=106.7
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hh-cCCCCCCCCchhHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SY-EYKPECIGEGQKILFYTA 92 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 92 (427)
...|+++ +|.+..+.+.+.+.+.....+..+++|+++||+ |||+.+.++.++..+. +. ...+.. ..+...+.+.
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 124 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA--TSSIAIMFVL 124 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc--cchHHHHHHH
Confidence 3456665 599999999999999999999999999999995 9999999887777662 21 111100 1234556677
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhce-ec---cchhHhHHHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPY-IK---PWKIRFGIPAIFT 166 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~-l~---g~~~~F~i~~v~~ 166 (427)
..+.+++.|...+.....+.|.+++++ |....+ +.+.++|..+++.+.+. +. ||+.+|.+.++..
T Consensus 125 ~~l~g~~~g~~~~~~~~~i~~~~~~~~---------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~ 195 (438)
T TIGR00712 125 LFLNGWFQGMGWPPCGRTMVHWWSQSE---------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICA 195 (438)
T ss_pred HHHHHHHhhcchHHHHHHHHHhcCccc---------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 888899999988888889999876543 233444 67788888887766553 32 8999999887776
Q ss_pred HHHHHHH
Q 037418 167 VVATLVF 173 (427)
Q Consensus 167 ~i~~iif 173 (427)
++..++.
T Consensus 196 ~i~~~~~ 202 (438)
T TIGR00712 196 IIVALFA 202 (438)
T ss_pred HHHHHHH
Confidence 6654433
No 82
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.87 E-value=1.2e-06 Score=91.15 Aligned_cols=156 Identities=15% Similarity=0.116 Sum_probs=93.0
Q ss_pred hHHHHHHhHHHHHHHhhHhcCCchHHH-HHH-----HHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhc
Q 037418 4 ADIFAAYAMWVMITYLTNVWKISLVRA-AAI-----VNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYE 75 (427)
Q Consensus 4 ~eRfs~Yg~~~l~~yl~~~l~~~~~~A-~~~-----~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~ 75 (427)
.|-|.+.-+.....++.+.++.+..+. +.+ .++.....-+++++.|+++||+ |||+++.++.+++.+ .+..
T Consensus 27 ~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a 105 (490)
T PRK10642 27 MEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIG 105 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHH
Confidence 344433333345567777765333221 111 1222233447788999999996 999999999988887 2222
Q ss_pred CCCCCCC--CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh----
Q 037418 76 YKPECIG--EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAF---- 149 (427)
Q Consensus 76 ~~~~~~~--~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~---- 149 (427)
+.+++.. ......+.+...+.++|.|+..|+..++++|.++++. |....... ..+.++|..+|..+.
T Consensus 106 ~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~-~~~~~~G~~lg~~~~~~~~ 178 (490)
T PRK10642 106 LIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFMGSWL-DFGSIAGFVLGAGVVVLIS 178 (490)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 2221100 0011246788999999999999999999999887643 11112222 445566666555333
Q ss_pred cee------c-cchhHhHHHHHHHH
Q 037418 150 PYI------K-PWKIRFGIPAIFTV 167 (427)
Q Consensus 150 ~~l------~-g~~~~F~i~~v~~~ 167 (427)
.++ . ||++.|.+.++..+
T Consensus 179 ~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 179 TIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred HhcCHHHhcCccHHHHHHHHHHHHH
Confidence 222 2 89999998665433
No 83
>PRK15075 citrate-proton symporter; Provisional
Probab=98.85 E-value=1.8e-06 Score=88.30 Aligned_cols=143 Identities=14% Similarity=0.145 Sum_probs=87.2
Q ss_pred HHHHHhhHhcCCchHHHHHHH-HHHHH-HHH----HhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCC--
Q 037418 14 VMITYLTNVWKISLVRAAAIV-NFFWG-TVL----MLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGE-- 83 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~-~~~~~-~~y----~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~-- 83 (427)
.+..++.++++.++.+.+.+. +.... ..+ ++.++.|+++||+ ||||.++.+.++..+ .+..+.++....
T Consensus 36 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~ 114 (434)
T PRK15075 36 FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVTLSIMASGTLLIAFVPGYATIGL 114 (434)
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 455677778888877754433 22222 223 4578889999995 999999999988776 222222110000
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee---------c-
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI---------K- 153 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l---------~- 153 (427)
.....+.++..+.++|.|..-|+..++.+|.+++++. ......+ ..+.++|..+++.+++.+ .
T Consensus 115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~r------g~~~~~~-~~~~~~g~~~g~~~g~~l~~~~~~~~~~~ 187 (434)
T PRK15075 115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRK------GFYTSWQ-SASQQVAVVFAALLGYLLNQWLSPAQMAE 187 (434)
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccc------hHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCHHHHhc
Confidence 0012456788899999999999999999998876431 1112222 233444444443333322 2
Q ss_pred -cchhHhHHHHH
Q 037418 154 -PWKIRFGIPAI 164 (427)
Q Consensus 154 -g~~~~F~i~~v 164 (427)
||++.|.+.++
T Consensus 188 ~gWr~~f~~~~~ 199 (434)
T PRK15075 188 WGWRIPFLIGCL 199 (434)
T ss_pred cchHHHHHHHHH
Confidence 99999987543
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.82 E-value=2e-06 Score=87.06 Aligned_cols=156 Identities=12% Similarity=0.085 Sum_probs=105.0
Q ss_pred hhhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc----cchHH-HHHHHHHHHHHhhh-
Q 037418 2 FWADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI----IGNYW-MLLVSSLAYSAVSY- 74 (427)
Q Consensus 2 ~~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~----lGr~~-~i~~g~~~~~~~~~- 74 (427)
.++|-..+.=.. .+-.|+++ .|++.++-+.+.....- ++..++.|+++||+ +|||| .+.++.++..+.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 345544444444 78889986 59999999988555444 78999999999996 38876 56666666654211
Q ss_pred -cCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhce
Q 037418 75 -EYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPY 151 (427)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~ 151 (427)
...+ ...+.+.+++...+.+...+...|...++..|..++++ |.+... .++.++|..+++.+..+
T Consensus 85 l~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~---------r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 85 MAFCP---PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE---------RGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHhcC---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---------hhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 1211 12345555555566778888999999999999865432 222333 56677888877766555
Q ss_pred ec----cchhHhHHHHHHHHHHHHH
Q 037418 152 IK----PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 152 l~----g~~~~F~i~~v~~~i~~ii 172 (427)
+. ||+..|.+.++..++..+.
T Consensus 153 l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 153 LADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHhcccCHHHHHHHHHHHHHHHHHH
Confidence 42 8999999877766555443
No 85
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.78 E-value=6.6e-07 Score=92.27 Aligned_cols=139 Identities=17% Similarity=0.195 Sum_probs=110.9
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhhcCCCCCCCCchhHHHHHHHHHHHh
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEYKPECIGEGQKILFYTALGLIAF 98 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~li~~ 98 (427)
+++++..+-+.+.+.+.....++++.+|+++||+ |-||++.++.++..+ ..|... ..+.+.+.+...+.++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa-----~~~~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAA-----SIGFYLLLVLRFLQGL 140 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH-----HhcchhhHHHHHHhHH
Confidence 5788999999999999999999999999999996 999999999888776 445443 2334467789999999
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHHHH
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~ii 172 (427)
+.|...|++..+.++-.+++ | |..+.. +.+..+|.+++..+++++- ||+..|.+.++.-++-.++
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~---E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~ 211 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPN---E------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFIL 211 (466)
T ss_pred HHhHHHhhhhceeeeECCHH---H------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 99999999999999865543 3 455666 7777788888877777765 9999999877776666655
Q ss_pred HHh
Q 037418 173 FLS 175 (427)
Q Consensus 173 f~~ 175 (427)
+..
T Consensus 212 w~~ 214 (466)
T KOG2532|consen 212 WFL 214 (466)
T ss_pred HHH
Confidence 544
No 86
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.78 E-value=3.8e-07 Score=93.19 Aligned_cols=302 Identities=15% Similarity=0.131 Sum_probs=174.5
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhc---ccchHHHHH-HHHHHHHHhhhcC-CC-CCCC--Cch
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDT---IIGNYWMLL-VSSLAYSAVSYEY-KP-ECIG--EGQ 85 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~---~lGr~~~i~-~g~~~~~~~~~~~-~~-~~~~--~~~ 85 (427)
-+..|+++.+|.+...++.+..+.....-+..++-|+++|| .+||||-.+ +|.+...+....+ .+ +... ...
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 56788889999999999999999999999999999999994 358877655 5666666522222 11 1111 112
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee----c------
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI----K------ 153 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l----~------ 153 (427)
...+.+...+..++...+..+..+++.|..++.++ |.+..+ -.+.++|.++...+.+.+ .
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~--------R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~ 174 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE--------RTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSN 174 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhh--------hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccch
Confidence 33345666777899999999999999998765442 233333 456667775444444332 2
Q ss_pred cchhHhHHHHHHHHHHHHHHHhcccceeecCCCCChhHHHHHHHHHHHhhccCCCCCCCccccccCCcccccccccCCCc
Q 037418 154 PWKIRFGIPAIFTVVATLVFLSGTCSYRRRKPLGSPLTTVFRVFVASALKLFYRIPRNASELYERDNVDEIYVVQHTRSL 233 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~p~g~pl~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 233 (427)
||++.+.+.++..+++.++.....|. ++.++..+ ++ + .
T Consensus 175 ~~~~~~~v~~iv~~v~~~i~~~~~ke-~~~~~~~~--------------~~------~---------------------~ 212 (428)
T PF13347_consen 175 GYRWMALVLAIVGLVFFLITFFFVKE-RSVEVTEQ--------------EK------K---------------------I 212 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhheeee-cccccccc--------------cc------c---------------------c
Confidence 46666666665555555555444332 00000000 00 0 0
Q ss_pred chhhhhhccCCCccchhccCCcccccchhhHHHHHhhccchhhhhhhHhhHhhhcccchhHHHHHHH-hcCCCCCceecc
Q 037418 234 RCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEETKGLLRMIPICLTFIIPGVVSSIGFTYFLEQADH-LNRKVGKLSVPL 312 (427)
Q Consensus 234 ~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~~-~d~~~~~~~ip~ 312 (427)
++.+..+. ++ ++ |.+ ..++....+.+....-..+...+..+. ++.+ +. .
T Consensus 213 ~~~~~~~~----------------~~-----~n-r~~---~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~----~~-~ 262 (428)
T PF13347_consen 213 SLRDSLRS----------------LF-----RN-RPF---RILLLAFFLQWLAFALMNTFLPYYFTYVLGNE----GL-I 262 (428)
T ss_pred ccccchhh----------------hc-----cc-chH---HHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc----hh-h
Confidence 00000000 00 01 111 123334444444444444444444433 3322 11 2
Q ss_pred cchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccch
Q 037418 313 PILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKIPMS 392 (427)
Q Consensus 313 ~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~s 392 (427)
+.+..+..+..++..|+..++.+|+.+| +-+..|.++.+++.+...+... -+
T Consensus 263 ~~~~~~~~~~~~v~~~~~~~l~~r~gk~--------~~~~~~~~~~~~~~~~~~~~~~--------------------~~ 314 (428)
T PF13347_consen 263 SIFMLIFFVASIVGSPLWGRLSKRFGKK--------KVYIIGLLLAALGFLLLFFLGP--------------------GS 314 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccce--------eehhhhHHHHHHHHHHHHHHHh--------------------hh
Confidence 2334456677788889998888887665 3466777777777776655421 25
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhHHHHHhcCC
Q 037418 393 MFWLLPQFLLLGGFDGVCEVSIACFFIDQFP 423 (427)
Q Consensus 393 ~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP 423 (427)
.+|..+..++.|++-....+.......+..+
T Consensus 315 ~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id 345 (428)
T PF13347_consen 315 PWLVLILFILAGIGYGAFFVIPWAMLADVID 345 (428)
T ss_pred HHHHHHHHHHhHhhhcccccccccccccchh
Confidence 6777788888888887777666655555443
No 87
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.73 E-value=4.1e-06 Score=87.36 Aligned_cols=154 Identities=13% Similarity=0.107 Sum_probs=101.8
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc----cchHHH-HHHHHHHHHHhh--hc
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI----IGNYWM-LLVSSLAYSAVS--YE 75 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~----lGr~~~-i~~g~~~~~~~~--~~ 75 (427)
++-..++-.. .+..|+++ .|.+..+.+.+ ...+..|++.++-|.++||+ +||||. ++++.+...+.. ..
T Consensus 23 ~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~--~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a 99 (491)
T PRK11010 23 ASGLPLALTSGTLQAWMTV-ENIDLKTIGFF--SLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMG 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH--HHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 3444444444 66677654 58888888775 33444468899999999995 399986 545555554422 11
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 76 YKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
..++ ..+.+.+.....+.+++.+...+...++..|.+++++ |.+... -.+.++|.++++.+..++.
T Consensus 100 ~~~~---~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~---------rg~~~~i~~~g~~lG~llg~~l~~~l~ 167 (491)
T PRK11010 100 FLEP---GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE---------RGAGAAISVLGYRLAMLVSGGLALWLA 167 (491)
T ss_pred HcCC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 2356667777788899999999999999999876432 222222 4667778777776666553
Q ss_pred ----cchhHhHHHHHHHHHHHHH
Q 037418 154 ----PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 154 ----g~~~~F~i~~v~~~i~~ii 172 (427)
||+..|.+.++.+++..+.
T Consensus 168 ~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 168 DRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred hcccCHHHHHHHHHHHHHHHHHH
Confidence 8999999887776665443
No 88
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.67 E-value=9.5e-07 Score=87.84 Aligned_cols=153 Identities=12% Similarity=0.125 Sum_probs=121.1
Q ss_pred HHHhHH-H---HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCC
Q 037418 8 AAYAMW-V---MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECI 81 (427)
Q Consensus 8 s~Yg~~-~---l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~ 81 (427)
+||=.| + ...++.++.++|.+|-+.+.+.+....-++-++.|.++||. +.|+-+-+|.++..+ .+.+.
T Consensus 40 ~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gf----- 113 (448)
T COG2271 40 AFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGF----- 113 (448)
T ss_pred HHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhh-----
Confidence 566666 3 45677778899999999999999999999999999999996 999999999988887 23323
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhh--ceec---c
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAF--PYIK---P 154 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~--~~l~---g 154 (427)
+.+.+.+.+-+.+.+.-+|.=.|.....++.-|+.++ |-+..+ -.+.|+|..+.+.++ +++. +
T Consensus 114 -s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e---------RG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 114 -SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE---------RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred -hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc---------cCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 2367778888889999999999999999999886543 333333 578999999998888 7666 9
Q ss_pred chhHhHHHHHHH-HHHHHHHHhc
Q 037418 155 WKIRFGIPAIFT-VVATLVFLSG 176 (427)
Q Consensus 155 ~~~~F~i~~v~~-~i~~iif~~~ 176 (427)
|+.+|.+|++.. +++++.+..+
T Consensus 184 w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999997665 5555555544
No 89
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.62 E-value=4.9e-07 Score=91.14 Aligned_cols=157 Identities=12% Similarity=-0.001 Sum_probs=104.7
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCch
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQ 85 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~ 85 (427)
++++++. .+..|+.+ .|.+ +++.....+.....+..++.|+++||+ ||+|.+..+..+..+....... ..+
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~----~~~ 301 (399)
T PRK05122 230 IGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWL----APS 301 (399)
T ss_pred HHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHH----hcc
Confidence 4555555 55666654 4553 445555666666677888999999995 9999888887666552211110 123
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhH
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFG 160 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~ 160 (427)
.+.+.++..+.++|.+...|...+...|..+++. +.+.+. +...++|..+++.+.+++. ||+..|.
T Consensus 302 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 372 (399)
T PRK05122 302 PWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN---------RGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFL 372 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 4456677788889998888887777777554322 334444 6678888888877777775 9999999
Q ss_pred HHHHHHHHHHHHHHhcccce
Q 037418 161 IPAIFTVVATLVFLSGTCSY 180 (427)
Q Consensus 161 i~~v~~~i~~iif~~~~~~~ 180 (427)
+.++..+++++.....+++.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 373 AAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHhcccc
Confidence 88888877776655544433
No 90
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.62 E-value=4.7e-07 Score=89.42 Aligned_cols=142 Identities=12% Similarity=0.061 Sum_probs=103.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhh--cCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSY--EYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (427)
.+..|. +++|.++.+++.+...+.....+..+++|+++||+ |||+.+.++..+..+... ...+ ......+..
T Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 300 (377)
T TIGR00890 227 LYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAMLFIP----MLNDVLFLA 300 (377)
T ss_pred HHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHcc----cchhHHHHH
Confidence 344454 56899999999988888888899999999999995 999999888777666221 1111 112233444
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHH
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFT 166 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~ 166 (427)
...+.+++.|...+...++..|.+++++ +.+.+. +...++|..+++.+.+++. ||+..|.+.++..
T Consensus 301 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~ 371 (377)
T TIGR00890 301 TVALVFFTWGGTISLFPSLVSDIFGPAN---------SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFA 371 (377)
T ss_pred HHHHHHHHhccchhccHHHHHHHhhhhh---------hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHH
Confidence 5566777888877777888888876543 233333 6788999999999888775 9999999888777
Q ss_pred HHHH
Q 037418 167 VVAT 170 (427)
Q Consensus 167 ~i~~ 170 (427)
++++
T Consensus 372 ~~~~ 375 (377)
T TIGR00890 372 LTSL 375 (377)
T ss_pred HHhc
Confidence 6654
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.61 E-value=7.5e-07 Score=86.81 Aligned_cols=155 Identities=18% Similarity=0.148 Sum_probs=121.1
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH-HHHHHHHHHHHhhhcCCCCCCCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW-MLLVSSLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~-~i~~g~~~~~~~~~~~~~~~~~~ 83 (427)
-.++.... .+..|+.+.+|.++.+++.+.........+..++.|+++||+ |||+ .+.++..+..+....... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~----~ 262 (352)
T cd06174 188 SFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLAL----A 262 (352)
T ss_pred HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHH----h
Confidence 34555555 677777777799999999999999999999999999999995 9999 888888777762221110 1
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhH
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIR 158 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~ 158 (427)
.+.+..++...+.+++.+...+...++..|..++++ +.+.++ ....++|..+++.+.+++. ||+..
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~ 333 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA---------RGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGV 333 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchH
Confidence 235667788899999999999999999999876532 344444 6788999999999988775 99999
Q ss_pred hHHHHHHHHHHHHHHH
Q 037418 159 FGIPAIFTVVATLVFL 174 (427)
Q Consensus 159 F~i~~v~~~i~~iif~ 174 (427)
|.+.++..+++.++..
T Consensus 334 ~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 334 FLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHhe
Confidence 9998888887776654
No 92
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.61 E-value=9.9e-07 Score=88.89 Aligned_cols=154 Identities=12% Similarity=-0.028 Sum_probs=86.9
Q ss_pred HhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchh
Q 037418 10 YAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQK 86 (427)
Q Consensus 10 Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~ 86 (427)
+|.. -+.++|+++.|++.++.+.++++-.....+.+++.|.++||. |.||.+++...+..+ .-|...--+. +.-.
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l~~pff~~v~~-pll~ 100 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLLFGPFFIYVFG-PLLQ 100 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHTCHHHHHHTHH-HHHH
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 4554 688999999999999999999999999999999999999995 866665544333222 1111100000 0000
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH----HHHHHHHHHHHhhhhceec--cchhHhH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS----FCGVVLVPIIALIAFPYIK--PWKIRFG 160 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~----Y~~iNiG~~i~~~~~~~l~--g~~~~F~ 160 (427)
.-++++..+-++..|..-+...+.. |.|.++-+ |+..|. -+.-.+|.+++..++|++- +-+..|.
T Consensus 101 ~n~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~s--------r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fw 171 (412)
T PF01306_consen 101 SNFWLGAIIGGIYLGLVFNAGVPLS-EAYAERVS--------RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFW 171 (412)
T ss_dssp TT-HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHH--------HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcccchHH-HHHHHHHH--------HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHH
Confidence 1123344443444444444433433 55544322 333333 4556778888888888776 5667787
Q ss_pred HHHHHHHHHHHHHH
Q 037418 161 IPAIFTVVATLVFL 174 (427)
Q Consensus 161 i~~v~~~i~~iif~ 174 (427)
++.+..++..++.+
T Consensus 172 i~s~~~~il~lll~ 185 (412)
T PF01306_consen 172 IASAAAIILLLLLL 185 (412)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 76554444443333
No 93
>PRK03699 putative transporter; Provisional
Probab=98.60 E-value=3.5e-07 Score=92.34 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=108.6
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
-++++++. -+..|+++.+|++..+++.+...+.....+..+++|+++||+ ||||.+..+..+..+.+..+.. ..
T Consensus 218 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~----~~ 292 (394)
T PRK03699 218 ILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLMYLFVN----TD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHH----cC
Confidence 34566777 688899999999999999999998888899999999999995 9999888776655542211110 11
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHH
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGI 161 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i 161 (427)
+.+.......+.+++.+..-|...+...++.++++++ ..+.. +.+.++|..+++.+.+++. |++..|.+
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~-~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~ 364 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPK-------LVNFI-LTCGTIGTMLTFVVTSPIVAHFGLQAALLT 364 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHH-------HHHHH-HHhhhHHHHHHHHHHHHHHHHhCchhhhhh
Confidence 2333444556677777777788888887776543321 12222 6677899999999998886 88888876
Q ss_pred HHHHHHHHHH
Q 037418 162 PAIFTVVATL 171 (427)
Q Consensus 162 ~~v~~~i~~i 171 (427)
.++.++++.+
T Consensus 365 ~~~~~~~~~~ 374 (394)
T PRK03699 365 ANGLYAVVFV 374 (394)
T ss_pred hHHHHHHHHH
Confidence 6665555543
No 94
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.58 E-value=6.4e-07 Score=89.01 Aligned_cols=146 Identities=14% Similarity=0.019 Sum_probs=104.5
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
.+..|+++++|.++.+++.+............+++|+++||+ |||+.+.++.+...+....... ..+.+.++...
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 295 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAA----DNSLWALLMLQ 295 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 566788888999999999888777766677788999999995 9999988876655442211110 12344455556
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.+++.|...+...++..|..+++ +.+..+ +...++|..+++.+.+++. ||+..|.+.++..++
T Consensus 296 ~~~g~~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~ 365 (375)
T TIGR00899 296 LLNAIFIGILAGIGMLYFQDLMPGR----------AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIV 365 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcch----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 6667777777777777777765431 223444 6778899999999988775 899999998888877
Q ss_pred HHHHHH
Q 037418 169 ATLVFL 174 (427)
Q Consensus 169 ~~iif~ 174 (427)
+.++.+
T Consensus 366 ~~~~~~ 371 (375)
T TIGR00899 366 ALFCLL 371 (375)
T ss_pred HHHHHh
Confidence 776654
No 95
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.55 E-value=1e-06 Score=88.97 Aligned_cols=149 Identities=12% Similarity=0.044 Sum_probs=99.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
.+..|+++++|+++.+++.+.+.......+..+++|+++||+ ||||.+..+.....+.+..... ..+.+.+....
T Consensus 238 ~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~ 312 (393)
T PRK15011 238 NMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLM----AHSPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHH
Confidence 566788888999999999888877777777889999999995 9999887766554432211110 11233344444
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ 170 (427)
.+.+++.|..-+...+...|..+++. ....+.+ ....|+|..+++.+++++. ||+..|.++++..++++
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p~~~-------g~~~~~~-~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~ 384 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMPGQA-------GSATTLY-TNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCc-------chHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 55555555555555555566554321 1122233 3557899999998888776 89999998888887777
Q ss_pred HHHHh
Q 037418 171 LVFLS 175 (427)
Q Consensus 171 iif~~ 175 (427)
++.+.
T Consensus 385 ~~~~~ 389 (393)
T PRK15011 385 FCLLR 389 (393)
T ss_pred HHHHh
Confidence 66553
No 96
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.55 E-value=1.4e-06 Score=87.99 Aligned_cols=156 Identities=7% Similarity=-0.056 Sum_probs=111.2
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~ 83 (427)
.-++|+++. .+..|+.+ .|.+..+++.....+.....+..+++|+++|| .||++.+..+..+..+....+.. . .
T Consensus 217 ~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~-~--~ 291 (393)
T PRK09705 217 INGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIW-L--P 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHH-c--c
Confidence 346777887 67788876 79999999999999999999999999999999 59999988887666552221100 0 1
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKI 157 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~ 157 (427)
.+.... ...+.++|.|...|+......|++++++ + +.+.++ +...++|..+++.+.+++. +|..
T Consensus 292 ~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~--~------~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 361 (393)
T PRK09705 292 LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA--I------AGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLM 361 (393)
T ss_pred chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH--H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchH
Confidence 111122 2345677888888877777777765322 1 334454 7788889999999998886 5888
Q ss_pred HhHHHHHHHHHHHHHHHh
Q 037418 158 RFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 158 ~F~i~~v~~~i~~iif~~ 175 (427)
+|.+.++..+++.+....
T Consensus 362 ~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 362 DWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888777776655543
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.54 E-value=1.4e-06 Score=93.54 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=110.5
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-----hhhcCC-C---------
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-----VSYEYK-P--------- 78 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-----~~~~~~-~--------- 78 (427)
....-+.++++++.++.+.+.+.+.....+..++.|+++||. ||+|.+.+|.+++.+ .+|-.. .
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 333445567999999999999999999999999999999995 999999999888777 222100 0
Q ss_pred -----------CC-----------------CC----CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhh
Q 037418 79 -----------EC-----------------IG----EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMR 126 (427)
Q Consensus 79 -----------~~-----------------~~----~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~ 126 (427)
.| .. ......++++..+.++|.+...+...+++.|-+++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~------- 205 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN------- 205 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccc-------
Confidence 01 00 0124466789999999999999999999999886643
Q ss_pred hhHHHHHH--HHHHHHHHHHHhhhhceec-------------------------cchhHhHHHHHHHHHHHHHHH
Q 037418 127 SAKLFFFS--FCGVVLVPIIALIAFPYIK-------------------------PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 127 ~~~~~~f~--Y~~iNiG~~i~~~~~~~l~-------------------------g~~~~F~i~~v~~~i~~iif~ 174 (427)
+...+. +.+.++|..+|+++++++. +|+.+|.+.++..++..+.++
T Consensus 206 --~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~ 278 (633)
T TIGR00805 206 --SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF 278 (633)
T ss_pred --cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333 7888888888887766442 278889888776666554443
No 98
>PRK09952 shikimate transporter; Provisional
Probab=98.53 E-value=1.8e-06 Score=88.51 Aligned_cols=162 Identities=9% Similarity=0.032 Sum_probs=106.2
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPEC 80 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~ 80 (427)
+++-+++|+.. .+..|+++.+|++......+.........+..+++|+++||+ ||||++..+.++..+ .++.... .
T Consensus 260 ~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~-~ 337 (438)
T PRK09952 260 LCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAFPFFMA-L 337 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH-H
Confidence 34557788877 677888888999988765555555556667778899999995 999999888665544 1111100 0
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HH-HHHHHHHHHhhhhceec----
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FC-GVVLVPIIALIAFPYIK---- 153 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~-~iNiG~~i~~~~~~~l~---- 153 (427)
......+.+...+.+.+++.|...+...++.+|.++.+. |.++.. |. +..+|+.++|.+.+++.
T Consensus 338 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~---------r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 338 EAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY---------RYSGAGVGYQVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch---------hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 001123334445566678888888888899999887632 333433 43 34477778888887763
Q ss_pred -cchhHhHHHHHHHHHHHHHHHh
Q 037418 154 -PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 154 -g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+|...|...++..+++.+..+.
T Consensus 409 ~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 409 GSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred CCchHHHHHHHHHHHHHHHHHHH
Confidence 4777777777766666655443
No 99
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.53 E-value=3e-05 Score=77.59 Aligned_cols=140 Identities=12% Similarity=0.142 Sum_probs=110.0
Q ss_pred hHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHHHHHHHHH
Q 037418 20 TNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFYTALGLIA 97 (427)
Q Consensus 20 ~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~li~ 97 (427)
-+++|.|..+|+..++.|....-++.++-..+.||+ .|||.++....+..+ .+..+ ..+++.+.++..+.+
T Consensus 40 A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~al------Ap~f~~Ll~aR~~~g 112 (394)
T COG2814 40 AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSAL------APSFAVLLLARALAG 112 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHH------hccHHHHHHHHHHHH
Confidence 357999999999999999999999999999999995 888888887777776 33333 346789999999999
Q ss_pred hhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHH
Q 037418 98 FGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 98 ~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ii 172 (427)
+..|.+.+-..+..+|..++++ +.+... +.+..+...+|.-++.++. |||..|.+-++.-.++.+.
T Consensus 113 ~a~G~f~~i~~~~a~~lvpp~~---------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~ 183 (394)
T COG2814 113 LAHGVFWSIAAALAARLVPPGK---------RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLL 183 (394)
T ss_pred HHHHHHHHHHHHHHHHHcCccc---------hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987754 334444 5666666666666666665 9999999766665555554
Q ss_pred HHh
Q 037418 173 FLS 175 (427)
Q Consensus 173 f~~ 175 (427)
.+.
T Consensus 184 ~~~ 186 (394)
T COG2814 184 LWK 186 (394)
T ss_pred HHH
Confidence 443
No 100
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.53 E-value=2.1e-06 Score=84.95 Aligned_cols=154 Identities=14% Similarity=0.004 Sum_probs=101.9
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHH-HH-------HHHHHHHHhhhcC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWM-LL-------VSSLAYSAVSYEY 76 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~-i~-------~g~~~~~~~~~~~ 76 (427)
-++++++. .+..|+++.+|.+..+++.+.........+..+++|+++||+ |||+. +. .+.++..+.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T TIGR00893 228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAIIAGLVLSLLMFAT 306 (399)
T ss_pred HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 34556666 678889889999999999999988888899999999999995 87751 11 1111111111101
Q ss_pred CCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec-
Q 037418 77 KPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK- 153 (427)
Q Consensus 77 ~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~- 153 (427)
. ..+.......+.+++.+..+..|...++..|..++++ +.+.+. ....++|..+++.+.+++.
T Consensus 307 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~g~~~~~~i~g~l~~ 372 (399)
T TIGR00893 307 N-----YVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNI---------AGLTGGLINSLGNLGGIVGPIVIGAIAA 372 (399)
T ss_pred c-----cchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhH---------HHHHHHHHHHHHHHhhhhhhHHhhhhcc
Confidence 0 0111222233333333333378889999999876543 233444 5677999999999998886
Q ss_pred --c-chhHhHHHHHHHHHHHHHHH
Q 037418 154 --P-WKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 154 --g-~~~~F~i~~v~~~i~~iif~ 174 (427)
| |+..|.+.++..+++.++.+
T Consensus 373 ~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 373 TTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHH
Confidence 6 99999888877777766554
No 101
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.53 E-value=7.1e-07 Score=90.96 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=111.2
Q ss_pred HHHHHhhHhcCCchHH-HHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHH
Q 037418 14 VMITYLTNVWKISLVR-AAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~-A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~ 90 (427)
.+..|+.+++|+++++ .+.+.++|.-...++.+++|+++|| +|.|+.+.++.+...+ .+..+ ..+...+.
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~f------a~Sl~~L~ 119 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLL------GTSVWHMQ 119 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHH------HHHHHHHH
Confidence 4788999999999999 9999999999999999999999999 5999999999888776 22212 23567888
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec--cchh---HhHHHHHH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK--PWKI---RFGIPAIF 165 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~--g~~~---~F~i~~v~ 165 (427)
+..++.+++.|..- ....++..-+++++ | .+...+.-.+.++|.++++.+++++. ||+. ...++...
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kE------R-~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSR------Y-QRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHH------H-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 99999999999998 88888988887543 1 12222225789999999988888765 6654 34466666
Q ss_pred HHHHHHH
Q 037418 166 TVVATLV 172 (427)
Q Consensus 166 ~~i~~ii 172 (427)
+.+++++
T Consensus 192 ~~~a~~~ 198 (511)
T TIGR00806 192 MTFSVFL 198 (511)
T ss_pred HHHHHHH
Confidence 6666654
No 102
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.51 E-value=2.2e-06 Score=85.99 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=101.3
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
.+..|+++ .|.+..+++.+.........+..++.|+++||+ |+++.+..+..++.+...... .......++
T Consensus 222 ~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~ 292 (381)
T PRK03633 222 LMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-------SQAAMAPAL 292 (381)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-------hhHHHHHHH
Confidence 45667764 699999999988888888889999999999995 999998888777665222111 112233456
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.+++.+...|...+...|..++++ +..... ..+.++|.++|+.+.+++. ||++.|.+.+...++
T Consensus 293 ~l~g~~~~~~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 293 FILGAAGFTLYPVAMAWACEKVEHHE---------LVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHccCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 66677777778888888888764432 122222 4677999999999999885 899999987777665
Q ss_pred HHHHH
Q 037418 169 ATLVF 173 (427)
Q Consensus 169 ~~iif 173 (427)
+.+..
T Consensus 364 ~~~~~ 368 (381)
T PRK03633 364 YLLML 368 (381)
T ss_pred HHHHH
Confidence 54333
No 103
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.46 E-value=3.8e-06 Score=87.51 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=90.7
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECI 81 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~ 81 (427)
..-+.||++. -+..|+++.+|++..++..+.........+..+++|+++||+ |||+++.++.+...+ .++.+.. .
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~-~- 337 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAIPAFIL-I- 337 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH-H-
Confidence 3457788888 788899888999998887776666666778888999999995 999999888764433 2221100 0
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
...+...++.+..+.+++.+...+...++..+.++++. |.+... |-..++++.+++.+.+++.
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~---------Rg~~~g~~~~~~~~~g~~~p~i~g~l~ 402 (490)
T PRK10642 338 NSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI---------RYSALAAAFNISVLVAGLTPTLAAWLV 402 (490)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc---------chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01234455566666666666666666777777776543 333333 4444555566777777653
No 104
>PRK11462 putative transporter; Provisional
Probab=98.44 E-value=0.00011 Score=76.15 Aligned_cols=129 Identities=13% Similarity=0.139 Sum_probs=85.8
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhc---ccchHHHHHH-HHHHHHHhhhc-CC-CCCCCCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDT---IIGNYWMLLV-SSLAYSAVSYE-YK-PECIGEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~---~lGr~~~i~~-g~~~~~~~~~~-~~-~~~~~~~~~~ 87 (427)
-+..|.++.+|.+.+.++.++.+-..+--+.-++-|+++|| .+||||--++ |.+.+.+.... .. |..+......
T Consensus 31 ~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~ 110 (460)
T PRK11462 31 YMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMI 110 (460)
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 47788899999999999999999999999999999999998 4799876654 44555552221 11 2111112233
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhh
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIA 148 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~ 148 (427)
.+++...+..++..++...-.++.++.-++ ++| |.+..+.. -.+.++|.++++.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~e---Rt~l~s~r-~~~~~iG~~~~~~~ 165 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITND--PTQ---RISLQSWR-FVLATAGGMLSTVL 165 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHH---HHHHHHHH-HHHHHHHHHHHHHH
Confidence 344455566778888888888999987644 444 22223322 45667776665444
No 105
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.43 E-value=1.2e-06 Score=73.43 Aligned_cols=124 Identities=19% Similarity=0.219 Sum_probs=89.4
Q ss_pred HHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 37 FWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 37 ~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
+.....+..++.|+++||+ |||+.+..+..+..+...... . ..+.+.+.....+.+++.+...+...++..|.++
T Consensus 7 ~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFA--L--SSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred ehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHH--H--hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3445567788899999995 999999988877766221111 0 1245666777888999999999999999999876
Q ss_pred cchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHHH
Q 037418 117 DSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 117 ~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif~ 174 (427)
+++ +.+..+ +...++|..+++.+.+++. ||+..|.+.++..+++.+...
T Consensus 82 ~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 82 PEE---------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred hhh---------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 543 233333 6778899988888888775 898888887777666655544
No 106
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.43 E-value=1.9e-06 Score=86.82 Aligned_cols=147 Identities=10% Similarity=-0.019 Sum_probs=98.8
Q ss_pred HHHHHhhHhcCCchH---HHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhcCCCCCCCCchhHHH
Q 037418 14 VMITYLTNVWKISLV---RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYEYKPECIGEGQKILF 89 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~---~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 89 (427)
.+..|+.+..+.... .++.+...+.....+..++.|+++||+ ||++++..+..+..+. ++... ..+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 314 (408)
T PRK09874 241 ILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF-----VQTPLQL 314 (408)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH-----hccHHHH
Confidence 556677664433222 123333344444556677889999995 9999999887766652 22111 1234556
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHH
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAI 164 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v 164 (427)
++...+.+++.|...|...++..+..+++. +.+.++ +...++|..+|+.+.+++. ||+..|.+.++
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~ 385 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQI---------AGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCccc---------ceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHH
Confidence 677788899999999998888876544322 233444 5667899999999988775 89999999888
Q ss_pred HHHHHHHHHHh
Q 037418 165 FTVVATLVFLS 175 (427)
Q Consensus 165 ~~~i~~iif~~ 175 (427)
..+++.+....
T Consensus 386 ~~l~~~~~~~~ 396 (408)
T PRK09874 386 VVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHHHH
Confidence 88777765544
No 107
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.42 E-value=3.3e-06 Score=86.49 Aligned_cols=155 Identities=14% Similarity=0.068 Sum_probs=91.4
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccch-HHHH-HH---HHHHHHHhhhcCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGN-YWML-LV---SSLAYSAVSYEYKPEC 80 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr-~~~i-~~---g~~~~~~~~~~~~~~~ 80 (427)
+.++++. .+..|+++.+|++..+++.....+.....++.+++|+++||+.++ |+.. .. +..+..+.+....
T Consensus 257 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~--- 333 (434)
T PRK11663 257 VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP--- 333 (434)
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc---
Confidence 3444555 567788888999999999999999999999999999999997533 2222 11 1111111111111
Q ss_pred CCCchhHHHHHHHHHHHhhcccccc--cccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cc
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLV--SIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PW 155 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~--~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~ 155 (427)
..+...... .+..+|.+..-| ......+|.++++. +. ....+.+...++|..+++.+.+++. ||
T Consensus 334 --~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g-~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~ 402 (434)
T PRK11663 334 --FASYVMQAA--CFFTIGFFVFGPQMLIGMAAAECSHKEA------AG-AATGFVGLFAYLGAALSGYPLAKVLEIWHW 402 (434)
T ss_pred --cccHHHHHH--HHHHHHHHHhhHHHHHHHHHHhcccHhh------HH-hHHHHHHHHHHHHHHHhcccHHHHHHhccc
Confidence 112222222 222233322222 22334455543221 11 2222227888999999998888876 89
Q ss_pred hhHhHHHHHHHHHHHHHHHh
Q 037418 156 KIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~~ 175 (427)
+..|.+.++..+++.++.+.
T Consensus 403 ~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 403 TGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99998887777666655543
No 108
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.42 E-value=1.5e-06 Score=86.36 Aligned_cols=151 Identities=15% Similarity=0.056 Sum_probs=104.1
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPEC 80 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~ 80 (427)
+...+.++++. .+..|+++++|.+..+++.+.........+..+++|+++||+ |||+.+..+..+..+ .++.... .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-~ 306 (394)
T TIGR00883 229 IATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALLAVPLLMA-L 306 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH-H
Confidence 34556777777 788888888999999999998888888889999999999995 999987766544433 2111100 0
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--H-HHHHHHHHHHhhhhceec---c
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--F-CGVVLVPIIALIAFPYIK---P 154 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y-~~iNiG~~i~~~~~~~l~---g 154 (427)
....+.+.+.....+.+++.+...+...++..|.+++++ +.+.+. | .+..+|..+++.+.+++. |
T Consensus 307 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 307 LDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV---------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc---------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 001234555667777888888899999999999887643 222222 3 455678888888888775 5
Q ss_pred -chhHhHHHHH
Q 037418 155 -WKIRFGIPAI 164 (427)
Q Consensus 155 -~~~~F~i~~v 164 (427)
|+..+...++
T Consensus 378 ~~~~~~~~~~~ 388 (394)
T TIGR00883 378 DWYAIGYYLAA 388 (394)
T ss_pred cchhHHHHHHH
Confidence 6655544443
No 109
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.41 E-value=6.1e-06 Score=86.20 Aligned_cols=138 Identities=13% Similarity=0.080 Sum_probs=97.4
Q ss_pred CCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hh-cCCCCCCCCchhHHHHHHHHHHHhhcc
Q 037418 24 KISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SY-EYKPECIGEGQKILFYTALGLIAFGMS 101 (427)
Q Consensus 24 ~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~li~~g~g 101 (427)
+.+..+.+.+...+.....++.++.|+++||+ |||+++.++.+++.+. +. ...+......+...++++..+.++|.|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 44566677778888888889999999999995 9999999998887762 11 121110001125678899999999999
Q ss_pred cccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee-------------------------c-
Q 037418 102 GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI-------------------------K- 153 (427)
Q Consensus 102 ~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l-------------------------~- 153 (427)
+.-|....++.|.++++. |....+ +...++|.++++.+..++ +
T Consensus 131 ~~~~~~~~~~~e~~p~~~---------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (502)
T TIGR00887 131 GDYPLSAIITSEFATKKW---------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDY 201 (502)
T ss_pred hhhHHHHHHHHHhcChhh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcc
Confidence 999999999999887643 233333 677788877776554321 2
Q ss_pred cchhHhHHHHHHHHHHHH
Q 037418 154 PWKIRFGIPAIFTVVATL 171 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~i 171 (427)
+|++.|.+.++..++..+
T Consensus 202 ~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 202 MWRILIGFGAVPALLALY 219 (502)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 799999877766554433
No 110
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.40 E-value=2e-06 Score=86.14 Aligned_cols=135 Identities=14% Similarity=0.041 Sum_probs=97.2
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.+..|+++++|++..+++.+...+.....+..+++|+++||+ |||+.+.++..+..+ .+..... ..+.+.+.++
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 334 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAI----GANVAVLGLG 334 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHh----CCchHHHHHH
Confidence 466788888999999999999998888999999999999995 999999888776533 1211110 1233444555
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---c-chhHhHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---P-WKIRFGIP 162 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g-~~~~F~i~ 162 (427)
+.+.+...+...+...++..|.++++. +.+.+. +...++|..+++.+.+++. | |+.+|...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 335 LFFQQMLVQGIWGILPKHLGEYFPTDQ---------RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHHHHccchhhHHHHHhhhCCcch---------hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 555666666666777788888775432 333444 6788999999999998886 5 77766653
No 111
>PRK03545 putative arabinose transporter; Provisional
Probab=98.39 E-value=6.9e-06 Score=82.64 Aligned_cols=155 Identities=8% Similarity=-0.050 Sum_probs=106.5
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCch
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQ 85 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~ 85 (427)
+.+++.. .+..|+++..|++..+++.+...+.....+..+++|+++||+ ||++. ..+..+..+....+.. . ..+
T Consensus 219 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~~~l~~-~--~~~ 293 (390)
T PRK03545 219 TAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCLLLLLP-A--ANS 293 (390)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHHHHHHH-H--hch
Confidence 3444444 566778888999999999999999988999999999999995 87664 4444443331111100 0 123
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhH
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFG 160 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~ 160 (427)
.+.+++...+.+++.+..-+...+.+.+..+++ +.+... ....++|..+|+.+.+++. |++..|.
T Consensus 294 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~ 363 (390)
T PRK03545 294 EWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDA----------TDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGY 363 (390)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCc----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHH
Confidence 455666777778888777777777776654321 233333 3456788888888888765 8999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 037418 161 IPAIFTVVATLVFLSG 176 (427)
Q Consensus 161 i~~v~~~i~~iif~~~ 176 (427)
+.++...++++++...
T Consensus 364 ~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 364 VGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888777654
No 112
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.37 E-value=3.9e-06 Score=87.06 Aligned_cols=141 Identities=12% Similarity=-0.010 Sum_probs=93.8
Q ss_pred HH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhcCCCCCCCCchhHHH
Q 037418 12 MW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYEYKPECIGEGQKILF 89 (427)
Q Consensus 12 ~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~~~~~~~~~~~~~~~ 89 (427)
+. .+..|+++.+|++..+++.+...+.....+..+++|+++||+ |||+.+..+..+..+. +..... .....+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 369 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI---GGANVWVL 369 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc---cccHHHHH
Confidence 45 678888888999999999999999999999999999999995 9999988876655542 111110 01122222
Q ss_pred HHHHHHHH-hhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 90 YTALGLIA-FGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 90 ~~~l~li~-~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
...+.+.+ .|.| ..+...++..|.++++. +.+.++ +...++|..+|+.+.+++. ||+..|.+.+
T Consensus 370 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~ 439 (496)
T PRK03893 370 GLLLFFQQMLGQG-ISGLLPKLIGGYFDTEQ---------RAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLS 439 (496)
T ss_pred HHHHHHHHHHhcc-cchhhHHHHHhhCCHHH---------hhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 22222222 3333 34556667777665432 344444 6778899999999988886 7777765444
Q ss_pred HHH
Q 037418 164 IFT 166 (427)
Q Consensus 164 v~~ 166 (427)
+.+
T Consensus 440 ~~~ 442 (496)
T PRK03893 440 FSL 442 (496)
T ss_pred HHH
Confidence 433
No 113
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.37 E-value=3.6e-06 Score=86.83 Aligned_cols=155 Identities=12% Similarity=-0.011 Sum_probs=107.4
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc-cchHHHHHHH--HHHHHHhhhcCCCCCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI-IGNYWMLLVS--SLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~-lGr~~~i~~g--~~~~~~~~~~~~~~~~~~ 83 (427)
++++.. .+..|+++ +|++..+++.+.+.......++.+++|+++||. .++++...++ .++..+...... ..
T Consensus 256 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~----~~ 330 (455)
T TIGR00892 256 GFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA----LA 330 (455)
T ss_pred HccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH----Hh
Confidence 344444 56677764 799999999999988888888888999999984 3444433332 222222111110 01
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKI 157 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~ 157 (427)
.+.+.+++...+.+++.|...++..+++.|.+++++ +.+.+. ....++|..+|+.+.+++. +|+.
T Consensus 331 ~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~ 401 (455)
T TIGR00892 331 GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR---------FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKY 401 (455)
T ss_pred chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH---------HhhHHhHHHHHHHHHHHccccceeeeehhcCCcch
Confidence 245666777888899999999999999998775432 233333 6778999999999999775 5999
Q ss_pred HhHHHHHHHHHHHHHHHhc
Q 037418 158 RFGIPAIFTVVATLVFLSG 176 (427)
Q Consensus 158 ~F~i~~v~~~i~~iif~~~ 176 (427)
.|.++++..+++.+..+.+
T Consensus 402 ~f~~~~~~~li~~~~~~~~ 420 (455)
T TIGR00892 402 IFYASGSIVVSAGLFLAIG 420 (455)
T ss_pred HHHHhhHHHHHHHHHHHHH
Confidence 9999888877776654443
No 114
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.36 E-value=5e-06 Score=84.44 Aligned_cols=151 Identities=11% Similarity=0.001 Sum_probs=104.8
Q ss_pred HhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHH
Q 037418 10 YAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKIL 88 (427)
Q Consensus 10 Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~ 88 (427)
+++. .+..|+.+.+|++..+++.+...+.....+..+++|+++|+. ++++.+..+..+..+.+..+.. ..+.+.
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~----~~~~~~ 314 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGL----MPMWIL 314 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHc----cchHHH
Confidence 3444 566788777999999999999888888889999999999984 7777777776655542211110 123445
Q ss_pred HHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 89 FYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 89 ~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
..+++.+.+++.+...+...+++.|..+++. +.+.+. +...++|..+|+.+.+++. |+...|.+.+
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~ 385 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEM---------LGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASG 385 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH---------HHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHH
Confidence 5667777888888877777788887765432 233444 5667889999999988886 7777777665
Q ss_pred HHHHHHHHHHH
Q 037418 164 IFTVVATLVFL 174 (427)
Q Consensus 164 v~~~i~~iif~ 174 (427)
++..+..++..
T Consensus 386 ~~~~~~~~~~~ 396 (417)
T PRK10489 386 FGLLIIGVLLL 396 (417)
T ss_pred HHHHHHHHHHH
Confidence 55444444443
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.36 E-value=8e-06 Score=82.42 Aligned_cols=144 Identities=12% Similarity=-0.085 Sum_probs=98.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
.+..|+++ .|++..+++.+...+.....+..+++|+++||+ ||++++..+.....+.+..+.. ..+.+.+.+..
T Consensus 242 ~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 315 (406)
T PRK11551 242 WLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAA----APSFAGMLLAG 315 (406)
T ss_pred HHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHh----cCcHHHHHHHH
Confidence 34556654 799999999999999988999999999999995 9999988765554442111110 11334444555
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTV 167 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~ 167 (427)
.+.+++.++..+...++..|.+++++ +.+... +...++|.++++.+.+++. +|...|.+.+...+
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~ 386 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQV---------RGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVIL 386 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhh---------hhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHH
Confidence 66777777777888888888876543 233333 6778899999999988874 45555655555554
Q ss_pred HHHHH
Q 037418 168 VATLV 172 (427)
Q Consensus 168 i~~ii 172 (427)
++.+.
T Consensus 387 ~~~~~ 391 (406)
T PRK11551 387 VAALA 391 (406)
T ss_pred HHHHH
Confidence 44433
No 116
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.31 E-value=5e-06 Score=85.96 Aligned_cols=154 Identities=14% Similarity=0.028 Sum_probs=91.7
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCc
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEG 84 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~ 84 (427)
.++++. -+..|+++.+|++..+++.....+.....+..+++|+++||+ |||+.+..+..+..+. +..... ..
T Consensus 273 ~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~~~~~~~~----~~ 347 (467)
T PRK09556 273 VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIFTLGVYQH----AT 347 (467)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHHHHHHHHh----cC
Confidence 345555 577899999999999999998888888899999999999996 8888766554333221 111110 11
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHH-HHHHHhhhhcee---------
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVL-VPIIALIAFPYI--------- 152 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNi-G~~i~~~~~~~l--------- 152 (427)
+....++.+.+++++.............|.++++. +..... -...|+ |..+++.+.+++
T Consensus 348 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~---------~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~ 418 (467)
T PRK09556 348 SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA---------IGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTP 418 (467)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh---------HHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccc
Confidence 22333344444443222222222244556665432 222222 345554 545555555443
Q ss_pred -----c-cchhHhHHHHHHHHHHHHHHHh
Q 037418 153 -----K-PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 153 -----~-g~~~~F~i~~v~~~i~~iif~~ 175 (427)
. ||+.+|.+..++.+++.+..+.
T Consensus 419 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 419 IFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred cccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 2 6999998888888777666553
No 117
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.31 E-value=7.2e-06 Score=83.54 Aligned_cols=149 Identities=13% Similarity=0.023 Sum_probs=95.2
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcC----CCCCCCC--chhHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEY----KPECIGE--GQKILF 89 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~----~~~~~~~--~~~~~~ 89 (427)
..++.+.+|++..+++...........+..+++|+++||+ |||+.+.++..+..+....+ ....... ......
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 3444467899998888888888888899999999999995 99999988876655511111 0000000 001222
Q ss_pred HHHHHHHHhhcc-cccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 90 YTALGLIAFGMS-GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 90 ~~~l~li~~g~g-~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
...+.+...+.+ +.-++...+..|.++++. +..... +.+.|+|.++++.+.+++. ||...|.+.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---------~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~ 456 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLSL---------RPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFG 456 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHH
Confidence 222222222222 344777777788876543 222333 6788999999998888765 8988888777
Q ss_pred HHHHHHHHHHH
Q 037418 164 IFTVVATLVFL 174 (427)
Q Consensus 164 v~~~i~~iif~ 174 (427)
+..+++.++..
T Consensus 457 ~~~~~~~i~~~ 467 (481)
T TIGR00879 457 GLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHh
Confidence 77666665543
No 118
>PRK12382 putative transporter; Provisional
Probab=98.30 E-value=5.5e-06 Score=83.33 Aligned_cols=151 Identities=12% Similarity=0.050 Sum_probs=103.3
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchh
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQK 86 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 86 (427)
++.++. .+..|+.+ .+++. ++.....+.....+..++.|++.||+ |++|.+.++..+..+....... ..+.
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~----~~~~ 302 (392)
T PRK12382 231 GFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWL----APTA 302 (392)
T ss_pred HHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHH----cccH
Confidence 334444 44566654 45543 44455566666677888999999995 9999998887776652211110 1234
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGI 161 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i 161 (427)
+..+++..+.+++.+...|...+...|.+++++ +.+.+. +...++|..+++.+.+++. ||+..|.+
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 373 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQV---------RGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLA 373 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 455667778888888888888777777664322 334444 6778999999998888876 99999999
Q ss_pred HHHHHHHHHHHHHh
Q 037418 162 PAIFTVVATLVFLS 175 (427)
Q Consensus 162 ~~v~~~i~~iif~~ 175 (427)
.++..+++.++.+.
T Consensus 374 ~~~~~~~~~~~~~~ 387 (392)
T PRK12382 374 GAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888887776654
No 119
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.30 E-value=6.2e-06 Score=80.79 Aligned_cols=139 Identities=10% Similarity=0.086 Sum_probs=103.0
Q ss_pred HHHHHhhHh--cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNV--WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~--l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
-+..|+++. +|++..+++.....+.+...+..++++++.||+ |++|.+.++..+..+....... ..... ...
T Consensus 162 w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~~~~~l~~~----~~~~~-~~~ 235 (310)
T TIGR01272 162 FLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAVLLSIGAAL----THGYV-AMW 235 (310)
T ss_pred HHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHH----cCCHH-HHH
Confidence 388899754 799999999999999999999999999999995 9999998887776662211110 01112 234
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHHHHHH
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTV 167 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~ 167 (427)
++.+++++.+.+.|++.++..+.++++.. ..+.. ..+..+|.++.|.+.+.+. |.+.+|.++.++.+
T Consensus 236 ~~~l~g~~~s~i~P~~~s~a~~~~~~~~~--------~asai-~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 236 FVLALGLFNSIMFPTIFSLALNALGRHTS--------QGSGI-LCLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhh--------hhHHH-HHHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 66789999999999999999888765422 22333 3556688888888888775 88888886665543
No 120
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.30 E-value=5.3e-06 Score=86.03 Aligned_cols=160 Identities=14% Similarity=0.087 Sum_probs=113.2
Q ss_pred hhhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccc-----hHHHHHHHHHHHH-Hhhh
Q 037418 2 FWADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIG-----NYWMLLVSSLAYS-AVSY 74 (427)
Q Consensus 2 ~~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lG-----r~~~i~~g~~~~~-~~~~ 74 (427)
.++|-.. +-+. .+..++++++|.+.++.+...+.......+-|+ .|.++||+ + ||+-++++.++.. +...
T Consensus 35 y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~~~~~~~ 111 (468)
T TIGR00788 35 LFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLGSAILYG 111 (468)
T ss_pred HHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHHHHHHHH
Confidence 4667777 5555 788888889999999998877766666556665 89999997 6 6777777776662 3222
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec-
Q 037418 75 EYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK- 153 (427)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~- 153 (427)
.+.. ...........+.+.+++.+.......++..|+.+ ++++. ....++.+ |.+.++|.++|+.+++++.
T Consensus 112 ~l~~---~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~---~~~~~s~~-~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 112 LLPG---KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA---GPSLVSWM-WGASATGGLISSLLGGPLLD 183 (468)
T ss_pred hccc---ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc---CCCeeeHH-HHHHHHHHHHHHHHHHHHHH
Confidence 2221 01122333346788999999999999999999987 33322 11112222 8889999999999998876
Q ss_pred --cchhHhHHHHHHHHHHHHH
Q 037418 154 --PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 154 --g~~~~F~i~~v~~~i~~ii 172 (427)
||+..|.+.++..++....
T Consensus 184 ~~~~~~~f~~~a~l~ll~~~~ 204 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQLFV 204 (468)
T ss_pred hcCcchHHHHHHHHHHHHHHH
Confidence 8999999888877766443
No 121
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.28 E-value=0.00039 Score=69.86 Aligned_cols=158 Identities=11% Similarity=0.017 Sum_probs=89.7
Q ss_pred hhhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHH--HH-HHHHHHHhhhHHHHhhhcccchHHHHHHHHHHH-H--H-hh
Q 037418 2 FWADIFAAYAMW-VMITYLTNVWKISLVRAAAIV--NF-FWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAY-S--A-VS 73 (427)
Q Consensus 2 ~~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~--~~-~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~-~--~-~~ 73 (427)
+++|-+.+.-.. .+..|++ +.|.+.++.+.+. .. +..-....|+++++.+|| +||||..+++..+. . + .+
T Consensus 10 y~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~~~~~~~ 87 (390)
T TIGR02718 10 YLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVSACLASL 87 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHHHHHHHH
Confidence 355555544444 6666775 4699999998863 32 333335677777888998 59999976665332 1 1 12
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhc
Q 037418 74 YEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFP 150 (427)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~ 150 (427)
....+ .......+...+.+.+.......+...++..|..++++ + ..++ -++..+|.++|....+
T Consensus 88 ~~~~~---~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~---------~-~~~~~~~~~g~~lG~~~g~~~~~ 154 (390)
T TIGR02718 88 ALVGP---DVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT---------L-AKGNAVQIAGVMIGFFGGGAGTL 154 (390)
T ss_pred HcCCc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh---------h-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111 01111122223333445555555555555444332111 1 2233 4566888888887776
Q ss_pred eec---cchhHhHHHHHHHHHHHHHHH
Q 037418 151 YIK---PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 151 ~l~---g~~~~F~i~~v~~~i~~iif~ 174 (427)
++. ||+..|.+.++..++..+..+
T Consensus 155 ~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 155 VLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 664 999999988877766555443
No 122
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.28 E-value=2.9e-06 Score=83.69 Aligned_cols=160 Identities=11% Similarity=0.032 Sum_probs=121.5
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcc
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMS 101 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g 101 (427)
.++.++++.+.+.+.+.....+...+-|.+.|| +|++-.+++|..++......+. + ..+++.++++..+-++|.+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFa--f--g~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFA--F--GNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHH--H--cchhHHHHHHHHHhhhhHH
Confidence 467788999999999999999999999999998 6999999999999888332222 1 2457789999999999999
Q ss_pred cccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHH-HHh
Q 037418 102 GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLV-FLS 175 (427)
Q Consensus 102 ~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~ii-f~~ 175 (427)
+...+-.++++|.|+++.. |.+... --.+.+|..+||-.++.+- |+++-|++.++.+++...+ ++.
T Consensus 175 ~~~tsglamlAd~f~~d~e--------r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~v 246 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNE--------RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLV 246 (464)
T ss_pred HHHhhhHHHHHHHcccchh--------hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHhe
Confidence 9999999999999988653 233333 4567888888888888775 9999999888887776654 444
Q ss_pred cccceeec--CCCCChhHHHH
Q 037418 176 GTCSYRRR--KPLGSPLTTVF 194 (427)
Q Consensus 176 ~~~~~~~~--~p~g~pl~~~~ 194 (427)
-+++-.+. .+++.|+.++.
T Consensus 247 i~p~~~~~~~~~~~~~~~~Ll 267 (464)
T KOG3764|consen 247 IEPTEMDPDSTEQGTPMWSLL 267 (464)
T ss_pred eCccccCccccccCccHHHHH
Confidence 44421111 34555665543
No 123
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.26 E-value=2.7e-05 Score=77.21 Aligned_cols=130 Identities=17% Similarity=0.181 Sum_probs=100.8
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
+|+..+.+.++++..||+.+-.+|-+...+.++..|++.+|+ |+|+.|++|..++.+......| -.....+..+..++
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~p-Aa~~~~y~~FL~~l 111 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWP-AASSKSYGFFLVAL 111 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhh-hhhhhhHHHHHHHH
Confidence 688888899999999999999999999999999999999995 9999999999999983222210 00134577888999
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l 152 (427)
.+++.|.|..++..++++++.-++++..+ |-.... -...+|+.++|.+++++
T Consensus 112 Fila~Gi~~LetaaNp~v~~lg~~~~a~~---rlnl~q----~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 112 FILASGIGLLETAANPYVTLLGKPESAAF---RLNLAQ----AFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHhhhHHHHhccchHHHHhCCchhHHH---HHHHHH----HhhhhHHHHHHHHHHHH
Confidence 99999999999999999999887754332 222222 33466777776665543
No 124
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.26 E-value=0.00013 Score=74.59 Aligned_cols=131 Identities=15% Similarity=0.234 Sum_probs=90.8
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHHHHH-HHHHHHH-hhhcCC-CCCCCCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWMLLV-SSLAYSA-VSYEYK-PECIGEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~i~~-g~~~~~~-~~~~~~-~~~~~~~~~~ 87 (427)
-|..|.|+..|++.+.|+.+..+--..--+.-++-|.+.||. +||||--++ |.+-..+ ...... |+.+......
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 477888899999999999999999999999999999999974 688776544 4444444 222122 2222223444
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
..++-..+..++...+.-.-.++.++.- +|++| |.+..+ -+..|+|.++...+.+.+
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT--~d~~E------R~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEIT--QDPQE------RASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhc--CCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667778888888777788888764 44655 444544 677888877766665444
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.25 E-value=1.3e-05 Score=81.75 Aligned_cols=136 Identities=11% Similarity=0.111 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHHHHHHHHHhhcccccc
Q 037418 28 VRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFYTALGLIAFGMSGHLV 105 (427)
Q Consensus 28 ~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~ 105 (427)
.+.+.+.+.......+..++.|+++||+ |||+++.++.++..+. +..... . .....+.+++...+.+++.+...+
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v~~~l~~~~~-~-~~~~~~~l~l~~~l~g~~~~~~~~ 327 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWALRFGFFAYGD-P-EYFGYALLFLSMIVYGCAFDFFNI 327 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcC-c-chhhHHHHHHHHHHHHHHHHHHHH
Confidence 4557777777777778889999999995 9999999998887762 221210 0 011234566778888999999989
Q ss_pred cccchhcccCCcchhhhhhhhhhHHHHHH--H-HHHHHHHHHHhhhhceec---------cchhHhHHHHHHHHHHHHHH
Q 037418 106 SIGGFMADQMTDSRAEQVSMRSAKLFFFS--F-CGVVLVPIIALIAFPYIK---------PWKIRFGIPAIFTVVATLVF 173 (427)
Q Consensus 106 ~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y-~~iNiG~~i~~~~~~~l~---------g~~~~F~i~~v~~~i~~iif 173 (427)
+...++.|.+++++ +.+.++ + ...++|..+|+.+.+++. ||+.+|.++++..+++.+++
T Consensus 328 ~~~~~i~~~~p~~~---------~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~ 398 (418)
T TIGR00889 328 SGSVFVEKEVPVHI---------RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLF 398 (418)
T ss_pred HHHHHHHHHCCHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999876543 344555 2 456789999999988764 38889988777766665554
Q ss_pred Hh
Q 037418 174 LS 175 (427)
Q Consensus 174 ~~ 175 (427)
..
T Consensus 399 ~~ 400 (418)
T TIGR00889 399 MI 400 (418)
T ss_pred HH
Confidence 43
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.24 E-value=7.8e-06 Score=83.16 Aligned_cols=147 Identities=10% Similarity=0.020 Sum_probs=101.6
Q ss_pred HHHHHhhHhc---CCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHH
Q 037418 14 VMITYLTNVW---KISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l---~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (427)
.+..|+.+.+ +.+..+.+.+.++......+..+++|+++||+ |||+.+.++..+..+....... ..+.+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~----~~~~~~~~ 319 (420)
T PRK09528 245 QFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGF----ATGPLEVS 319 (420)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHh----cccHHHHH
Confidence 4566666543 55666777777777777778899999999995 9999998888777662211110 12345566
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec---cchhHhHHHHH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK---PWKIRFGIPAI 164 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v 164 (427)
....+.+++.+...+....++.+.++++. +...+. ....++|..+++.+.+++. ||+..|.+.++
T Consensus 320 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~---------~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~ 390 (420)
T PRK09528 320 ILKLLHAFEVPFLLVGVFKYITLNFDVRL---------SATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGG 390 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCccc---------eeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHH
Confidence 66777888888887777778887775432 122221 2557899999999988886 99999998777
Q ss_pred HHHHHHHHHH
Q 037418 165 FTVVATLVFL 174 (427)
Q Consensus 165 ~~~i~~iif~ 174 (427)
..+++.++.+
T Consensus 391 ~~~i~~~~~~ 400 (420)
T PRK09528 391 IVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHH
Confidence 6665554444
No 127
>PRK15075 citrate-proton symporter; Provisional
Probab=98.23 E-value=1.7e-05 Score=81.14 Aligned_cols=136 Identities=10% Similarity=-0.027 Sum_probs=86.2
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhc--CCCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYE--YKPEC 80 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~--~~~~~ 80 (427)
...+++++. -+..|+++.+|++..++..+...+.....+..+++|+++||+ ||||.+.++..+..+ .++. ....
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~- 327 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSWLVA- 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 455677777 678888888999999988777777777778899999999995 999988876554432 1111 1000
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHH-HHHHHHhhhhceec
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVV-LVPIIALIAFPYIK 153 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iN-iG~~i~~~~~~~l~ 153 (427)
..........+.+.+++.|...+...++..|.++++. +...+. |-..+ +++.+++.+.+++.
T Consensus 328 --~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~---------rg~~~g~~~~~~~~~~g~~~p~~~g~i~ 392 (434)
T PRK15075 328 --APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV---------RTAGFSLAYSLATAIFGGFTPAISTWLI 392 (434)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc---------cchheeHHHHHHHHHHhhhHHHHHHHHH
Confidence 1122223334455566777777767778888776543 233443 22223 23455777777664
No 128
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.22 E-value=2.6e-05 Score=76.60 Aligned_cols=152 Identities=15% Similarity=0.068 Sum_probs=104.0
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLI 96 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li 96 (427)
..+.+..|+++.+.+.++-.--+...++..+.|.++||+ ||||..+..+++|.+....-. ..+.+.+.+|.++-
T Consensus 58 Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-----~~~~~~L~~GRvlg 131 (354)
T PF05631_consen 58 YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-----SSNYPVLLLGRVLG 131 (354)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-----ccccHHHHHHHHHH
Confidence 334456899999988888776666677777779999995 999999999999998433222 34578899999999
Q ss_pred HhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec-----cchhHhHHHHHHHHH
Q 037418 97 AFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK-----PWKIRFGIPAIFTVV 168 (427)
Q Consensus 97 ~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~-----g~~~~F~i~~v~~~i 168 (427)
++++.+..+.--+....+..+++-+ +..+..-|+ ++.+.+-+..+..++-++. |...-|..+.+..++
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~----~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~ 207 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFP----QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAV 207 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC----hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 9999999988888776665443322 112344554 2222233333333433332 446779988888888
Q ss_pred HHHHHHhccc
Q 037418 169 ATLVFLSGTC 178 (427)
Q Consensus 169 ~~iif~~~~~ 178 (427)
+.++....++
T Consensus 208 ~~~~I~~~W~ 217 (354)
T PF05631_consen 208 AAVLILKTWP 217 (354)
T ss_pred HHHHHHhccc
Confidence 8876665544
No 129
>PTZ00207 hypothetical protein; Provisional
Probab=98.20 E-value=1.6e-05 Score=84.10 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=99.0
Q ss_pred HhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhH
Q 037418 10 YAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKI 87 (427)
Q Consensus 10 Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~ 87 (427)
|+..+....+.+++|+++.+.+.+.+...... .+.+++|+++||+ |+|+++.++.++..+. +..+........+.+
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 33445666788899999999999887754444 4566789999995 9999999999988871 111110000023577
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHH-Hhhhhceec-cchhHhHHHH
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPII-ALIAFPYIK-PWKIRFGIPA 163 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i-~~~~~~~l~-g~~~~F~i~~ 163 (427)
.+++...+.++|.|.+.+.....+.+.|+++ |..... ..+.++|+.+ +++...++. +|+..|.+.+
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~----------RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~ 191 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN----------RGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLM 191 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChhh----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7888889999999988888888888887532 233333 6778888874 555555555 7776665444
Q ss_pred HHH
Q 037418 164 IFT 166 (427)
Q Consensus 164 v~~ 166 (427)
+..
T Consensus 192 vl~ 194 (591)
T PTZ00207 192 SFA 194 (591)
T ss_pred HHH
Confidence 443
No 130
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.20 E-value=2.8e-05 Score=80.70 Aligned_cols=153 Identities=13% Similarity=0.019 Sum_probs=93.0
Q ss_pred HhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH-------HHHHHHHHHHHhhhcCCCCCC
Q 037418 10 YAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW-------MLLVSSLAYSAVSYEYKPECI 81 (427)
Q Consensus 10 Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~-------~i~~g~~~~~~~~~~~~~~~~ 81 (427)
+++. .+..|+.+++|++..+++.+...+.....+..+++|+++||+ |||+ .+.+...+..+.+..+. .
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l~~i~~~~~~--~- 344 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTLGGVFCIWLG--R- 344 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHHHHHHHHHhc--c-
Confidence 3344 466788888999999999999999999999999999999995 7652 22222222211111111 0
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchh
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKI 157 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~ 157 (427)
..+.+...+.+.+.+++.+...+...+...+.. +++ +..... ..+.|+|+.+++.+.+.-. +|+.
T Consensus 345 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~------~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~ 413 (476)
T PLN00028 345 -ANSLGAAIVVMILFSIFVQAACGATFGIVPFVS----RRS------LGVISGLTGAGGNVGAVLTQLLFFTGSSYSTET 413 (476)
T ss_pred -cchHHHHHHHHHHHHHHHHHhhhhhcccCcccC----hhh------chhhhhhhhccccHHHHHHHHHHHhcCCccHhh
Confidence 123334444555666665555555555554432 221 222222 4455666666665544212 6999
Q ss_pred HhHHHHHHHHHHHHHHHhcc
Q 037418 158 RFGIPAIFTVVATLVFLSGT 177 (427)
Q Consensus 158 ~F~i~~v~~~i~~iif~~~~ 177 (427)
+|.+.++.++++.++.++.+
T Consensus 414 ~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 414 GISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHHHHHHHhee
Confidence 99999988888888777654
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.20 E-value=3.2e-05 Score=80.24 Aligned_cols=158 Identities=15% Similarity=0.172 Sum_probs=121.5
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchH--HHHHHHHHHHHH----hhhcCCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNY--WMLLVSSLAYSA----VSYEYKPEC 80 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~--~~i~~g~~~~~~----~~~~~~~~~ 80 (427)
+...+. ...+|.++.+|++..+-..+.-+-.....++.++.|++.||+ |.+ ++++.+..+..+ .+.++.+..
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344455 788999999999999998888888999999999999999995 988 888888877754 222111110
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----c
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----P 154 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g 154 (427)
....+.+-+++.=.++++..|...+..-++.++..++++. ..+|. -..--..+++||.+.+.+. +
T Consensus 375 ~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e---------~efFgly~i~gk~ss~lGPll~g~i~~~tg~ 445 (477)
T PF11700_consen 375 FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE---------AEFFGLYAITGKASSWLGPLLFGLITDATGS 445 (477)
T ss_pred cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1123556677666689999999999999999999887643 45777 4566777889999988886 5
Q ss_pred chhHhHHHHHHHHHHHHHHHh
Q 037418 155 WKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 155 ~~~~F~i~~v~~~i~~iif~~ 175 (427)
.+.+|..-.+.++++++++..
T Consensus 446 ~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 446 QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred chhHHHHHHHHHHHHHHHHhh
Confidence 899999888888888877753
No 132
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.19 E-value=2.9e-05 Score=81.06 Aligned_cols=159 Identities=7% Similarity=-0.016 Sum_probs=98.1
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHH-HHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh---hhcCCCCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFW-GTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV---SYEYKPECIG 82 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~-~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~---~~~~~~~~~~ 82 (427)
+.++.. ....|+.+.+|++..+++.+..... ....+..+++|+++||+ |++|.+.++.++..+. ...+.. .
T Consensus 237 ~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~~---~ 312 (491)
T PRK11010 237 GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLSI---T 312 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHh---c
Confidence 333444 5667777789999999999875444 56778899999999995 9999887776654431 111110 0
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHh
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRF 159 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F 159 (427)
..+...+.....+..+..|..-+...++..+..+++-+.. ....+ +...++|..+++.+.+++. ||+..|
T Consensus 313 ~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t------~~gl~-~s~~~lg~~~~~~~~G~l~~~~G~~~~f 385 (491)
T PRK11010 313 DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSAT------QFALL-SALSAVGRVYVGPVAGWFVEAHGWPTFY 385 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHH-HHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 1122333334444333333333444555555554432211 12223 5667889887777777765 999999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 037418 160 GIPAIFTVVATLVFLSGT 177 (427)
Q Consensus 160 ~i~~v~~~i~~iif~~~~ 177 (427)
.+.++..+++++.....+
T Consensus 386 ~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 386 LFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 988888888877665543
No 133
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.17 E-value=1.5e-05 Score=81.45 Aligned_cols=158 Identities=16% Similarity=0.017 Sum_probs=91.0
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGE 83 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~ 83 (427)
-+.+|++. -+-.|+.+.+|++..+++...........+..+++|+++||+ |||+.+.++..+..+ ..+.... ....
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~-~~~~ 333 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSA-LQNV 333 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHH-HHcC
Confidence 35677777 677888888999999988888777776677778889999995 999988877655433 1111100 0001
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHH-HHHHHhhhhceec--c-chh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVL-VPIIALIAFPYIK--P-WKI 157 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNi-G~~i~~~~~~~l~--g-~~~ 157 (427)
.+.......+.+...+.+...+...++..|.++++. |..... |...|+ +...++.+.+++. | |..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~---------r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~ 404 (432)
T PRK10406 334 SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV---------RALGVGLSYAVANALFGGSAEYVALSLKSIGMETA 404 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc---------cchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcH
Confidence 111111111111222333333456677889887643 344444 444343 2223556556555 4 666
Q ss_pred HhHHHHHHHHHHHHHHH
Q 037418 158 RFGIPAIFTVVATLVFL 174 (427)
Q Consensus 158 ~F~i~~v~~~i~~iif~ 174 (427)
.|...++..+++.+..+
T Consensus 405 ~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 405 FFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66665555555554433
No 134
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.16 E-value=1.2e-05 Score=81.84 Aligned_cols=161 Identities=17% Similarity=0.084 Sum_probs=101.4
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCch
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQ 85 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~ 85 (427)
+++++.. ....|++..++ +..+++.+.........++.++.|+++||+ |||+++.++..+..+....... ...+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~---~~~~ 310 (437)
T TIGR00792 236 LAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLGYLIFFF---AGSN 310 (437)
T ss_pred HHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHH---cchh
Confidence 4444444 44455554555 455566666666677778888999999995 9999999988776652211110 0123
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch----
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK---- 156 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~---- 156 (427)
.+.+.+...+.++|.|...+...++.+|..+.++.+. .++.....+. .+..++|..+++.+.+++- ||.
T Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~ 388 (437)
T TIGR00792 311 LPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKT--GVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAA 388 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc--CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCc
Confidence 4455667778889999999999999999876432110 0011223333 5678888888887777663 553
Q ss_pred ----------hH-hHHHHHHHHHHHHHHH
Q 037418 157 ----------IR-FGIPAIFTVVATLVFL 174 (427)
Q Consensus 157 ----------~~-F~i~~v~~~i~~iif~ 174 (427)
+. ..+|+++.+++++++.
T Consensus 389 ~~~~~~~~~~~~~~~~p~i~~~~~~~~~~ 417 (437)
T TIGR00792 389 QSPITLNGIKILMFAVPALFLLLAAIIIG 417 (437)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3466677777766554
No 135
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.15 E-value=5.2e-05 Score=76.77 Aligned_cols=156 Identities=11% Similarity=0.004 Sum_probs=100.1
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHH-HHHHHHH---hhhcCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLV-SSLAYSA---VSYEYKP 78 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~-g~~~~~~---~~~~~~~ 78 (427)
+.-.++|++. -+-.|+ +++|++..+++.+.........+..++.|+++||+ |||+.+.. +.+...+ .+... +
T Consensus 233 ~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~~~~l~~~-~ 309 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFV-AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIFTLALYYI-P 309 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHH-H
Confidence 3445677777 566676 45899999999888888888889999999999995 98887642 2222222 11111 0
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--- 153 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--- 153 (427)
.. ...+.+..++...+.+++.+..-|. .+...+. +++ + +.+.+. +...++|..+++.+.+++-
T Consensus 310 ~~-~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~---~------~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 310 QH-FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL-APK---H------KGAAMSVLNLSAGLSAFLAPAIAVLFIGFF 377 (402)
T ss_pred Hc-cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-Ccc---h------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 00 0123444555666677777766443 3444443 222 1 344444 7888999999998887765
Q ss_pred cchhHhHHHHHHHHHHHHHHH
Q 037418 154 PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif~ 174 (427)
||...|.+.++..+++.++..
T Consensus 378 g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 378 GAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 888888877777666655544
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.15 E-value=1e-05 Score=88.04 Aligned_cols=125 Identities=12% Similarity=0.039 Sum_probs=86.6
Q ss_pred HHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccC
Q 037418 36 FFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQM 115 (427)
Q Consensus 36 ~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~ 115 (427)
+......+..+++|+++||+ |||++++++.++..+....+. . ..+...+++...+.+...+...+...++.+|.|
T Consensus 603 l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~--~--~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLS--F--GNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHH--H--HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34455678889999999995 999999888877776222111 0 112233444445566666667778889999998
Q ss_pred CcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhHhHHHHHHHHHHHHHHH
Q 037418 116 TDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 116 ~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~F~i~~v~~~i~~iif~ 174 (427)
+.+. |.+++. +...++|+++|+.+++++. +....|.++++.++++.++.+
T Consensus 678 Pt~~---------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 678 PSDK---------RATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLAL 731 (742)
T ss_pred CHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 7642 455666 8899999999999988664 556677777777777665544
No 137
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.14 E-value=4.8e-05 Score=76.47 Aligned_cols=153 Identities=14% Similarity=-0.022 Sum_probs=109.1
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCch
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQ 85 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~ 85 (427)
.+++++. .+..|+++ +|.+..+++.+.+.......+..++.|.+.||+ |+++.+.++.+.+.+...... ...+
T Consensus 219 ~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~~~~~~----~~~~ 292 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGRWAIIG----AIEA 292 (382)
T ss_pred HHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHHHHHHH----hHhh
Confidence 4555555 67788865 899999999998887777778888999999995 999999999988887221111 0234
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHH
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIP 162 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~ 162 (427)
.+.++..-.+.+++.|..-+....++.|+ ++++ +...+..|+-.+..+|..+++.+++++. |+ ..|.+.
T Consensus 293 ~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~ 364 (382)
T TIGR00902 293 FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFM 364 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHH
Confidence 56677778899999999999999999875 4332 1112333322356788999999999886 65 456666
Q ss_pred HHHHHHHHHHH
Q 037418 163 AIFTVVATLVF 173 (427)
Q Consensus 163 ~v~~~i~~iif 173 (427)
++..++++++.
T Consensus 365 ~~~~~~~~~~~ 375 (382)
T TIGR00902 365 AIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHH
Confidence 66656665443
No 138
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.14 E-value=4.3e-05 Score=78.86 Aligned_cols=144 Identities=10% Similarity=0.035 Sum_probs=86.5
Q ss_pred HhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcC--CCCCCCCchhHHHHHHHHH
Q 037418 18 YLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEY--KPECIGEGQKILFYTALGL 95 (427)
Q Consensus 18 yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l 95 (427)
++.+.+|++...+............+..+++|+++||+ |||+.++.+.++..+....+ .. .. .........++.+
T Consensus 296 ~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~-~~-~~~~~~~~~~~~~ 372 (479)
T PRK10077 296 EIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAF-YT-QAPGIVALLSMLF 372 (479)
T ss_pred HHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHH-hc-CcccHHHHHHHHH
Confidence 34456788877777666666667778889999999995 99999999888776621111 10 00 1111122334444
Q ss_pred HHhhccc-ccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc------eec---cchhHhHHHH
Q 037418 96 IAFGMSG-HLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP------YIK---PWKIRFGIPA 163 (427)
Q Consensus 96 i~~g~g~-~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~------~l~---g~~~~F~i~~ 163 (427)
.+.+.+. .-|+..++..|.++++. |..... +...++|..+++.+.+ ++. ||+..|.+.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~e~~p~~~---------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 443 (479)
T PRK10077 373 YVAAFAMSWGPVCWVLLSEIFPNAI---------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYG 443 (479)
T ss_pred HHHHHhccccchhHHHhHhhCChhH---------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHH
Confidence 4444443 45778888898875432 333333 5666667666644433 332 6777777766
Q ss_pred HHHHHHHHHH
Q 037418 164 IFTVVATLVF 173 (427)
Q Consensus 164 v~~~i~~iif 173 (427)
+..+++.+..
T Consensus 444 ~~~~~~~~~~ 453 (479)
T PRK10077 444 CMGVLAALFM 453 (479)
T ss_pred HHHHHHHHHH
Confidence 5555554443
No 139
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.13 E-value=3.2e-05 Score=77.71 Aligned_cols=148 Identities=10% Similarity=-0.052 Sum_probs=94.4
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALG 94 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (427)
+..|+++.+|++..+++.+.........+..++.|+++||+ |+++.+.++..+..+....+.. . ..+.+...+...
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~-~--~~~~~~~~~~~~ 297 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFF-F--GGMKTASLIFAF 297 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHH-H--HhhHHHHHHHHH
Confidence 45677777899999999999999999999999999999995 9999998887766552211100 0 112233344444
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~ 170 (427)
+.+.|.++.-+.......+...+ ++. ..........++|..+|+.+++++- ||+..|.++++...++.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 369 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKG--GEL------LGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAM 369 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCc--chH------HHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHH
Confidence 55555544444333333333222 111 2222224566889999998888764 79999988877666555
Q ss_pred HHHH
Q 037418 171 LVFL 174 (427)
Q Consensus 171 iif~ 174 (427)
....
T Consensus 370 ~~~~ 373 (382)
T PRK10091 370 SSLL 373 (382)
T ss_pred HHHH
Confidence 4443
No 140
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.12 E-value=2.4e-05 Score=82.11 Aligned_cols=137 Identities=21% Similarity=0.108 Sum_probs=106.9
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHHHhhc
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLIAFGM 100 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li~~g~ 100 (427)
....+...++...+.|.....+++++.|.++|+ +|||++++++.+++.+ .+.... ..+.+.+.+...+.+++.
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~-----a~~~~~~~~~Rfl~G~~~ 185 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAF-----APNYWMFLIFRFLSGFFG 185 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHH-----hCcHHHHHHHHHHHHhhc
Confidence 455677888888899999999999999999999 8999999999999887 322221 356788999999999999
Q ss_pred ccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec-cchhHhHHHHHHHHHHHHH
Q 037418 101 SGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK-PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 101 g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~-g~~~~F~i~~v~~~i~~ii 172 (427)
++...+...+++|.+.++.. . ....+ +.....|+.+++...+++- +|++.+.+..+..++.++.
T Consensus 186 ~~~~~~~~~~~~E~~~~~~R------~-~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 186 SGPLTVGFGLVAEIVSPKQR------G-LALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred cchhHHhHhhheeecCcchh------h-HHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999998876531 1 12222 4566667777777777766 9999999877776666555
No 141
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.12 E-value=0.00097 Score=70.56 Aligned_cols=144 Identities=11% Similarity=0.062 Sum_probs=90.6
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
.|+.+++|-++. ...+.+.+....-+..++.|-++|. +|||+.++.+.+++++ .+.... ..+...+..|.++
T Consensus 68 ~~I~~diG~~~~-~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~at-----A~~~~~~iag~~l 140 (599)
T PF06609_consen 68 PYINADIGGSDN-WSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCAT-----AQNMNTFIAGMVL 140 (599)
T ss_pred HHHHHhcCCCcc-chHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhc-----CCcHHHHHHHHHH
Confidence 567778887644 4455566666667777778999998 5999999999999988 333222 3456678889999
Q ss_pred HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee--c-cchhHhHHHHHHHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI--K-PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 96 i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l--~-g~~~~F~i~~v~~~i~~ii 172 (427)
.++|.|...- ....++|..+.+. |.....+..+..-+...+++.++..+ + +|||.|.+.++...++++.
T Consensus 141 ~GvgaG~~~~-~~~~isEl~p~k~-------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 141 YGVGAGVQEL-AALAISELVPNKW-------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HHHhhHHHHH-HHHHHHHhcccch-------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHH
Confidence 9999888764 4455777764321 11111111111111111222222222 2 9999999998887777755
Q ss_pred HHh
Q 037418 173 FLS 175 (427)
Q Consensus 173 f~~ 175 (427)
..+
T Consensus 213 ~~~ 215 (599)
T PF06609_consen 213 IFF 215 (599)
T ss_pred HHH
Confidence 433
No 142
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.10 E-value=7.9e-05 Score=74.61 Aligned_cols=152 Identities=16% Similarity=0.079 Sum_probs=97.7
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALG 94 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (427)
+..|+++..|++....+.++..|.....+..++||.++|| +.++++.....+..+.+..+.. ...+.+.....+.
T Consensus 234 i~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~---~~~~~~~~~~~~~ 308 (394)
T COG2814 234 IRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTF---TGASPALALALLF 308 (394)
T ss_pred HHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHH
Confidence 4566777889999999999999999999999999999999 8999988886666652211110 0223344444455
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH----HHHHHHHHHHHhhhhceeccchhHhHHHHHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS----FCGVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~----Y~~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~ 170 (427)
+.+++.+..-.....-.++ ..+++++ .....| +.+|.+|+.+|..+... .||.....++++..+++.
T Consensus 309 ~wg~a~~~~~~~~~~~~a~-~~p~~~~-------~a~sl~~aa~nlgia~GA~lGG~v~~~-~g~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 309 LWGFAFSPALQGLQTRLAR-LAPDAAD-------LAGSLNVAAFNLGIALGAALGGLVLDA-LGYAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHhhhhhhHHHHHhcc-cCCCchH-------HHHHHHHHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHHHH
Confidence 5555555444444444444 2223322 233333 45555555555443333 288888999999999998
Q ss_pred HHHHhcccce
Q 037418 171 LVFLSGTCSY 180 (427)
Q Consensus 171 iif~~~~~~~ 180 (427)
++.+..+++.
T Consensus 380 ~~~~~~~~~~ 389 (394)
T COG2814 380 LLALLSARKD 389 (394)
T ss_pred HHHHHHHhcc
Confidence 8877665543
No 143
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.09 E-value=0.0014 Score=66.60 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=72.7
Q ss_pred HHHHhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 7 FAAYAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 7 fs~Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
|.-+|.. -+.+|+.+ .|+|..|.+.+.+.......+.|++-|++|||+..++|.+.+..++..+.+..... ..
T Consensus 15 f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~----~~ 89 (400)
T PF03825_consen 15 FFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF----SS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH----hc
Confidence 5556665 57888875 68999999999999999999999999999999867788777766665552211110 12
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
+.+.++..+.+..+.....-|...++.-+..+
T Consensus 90 ~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 90 SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 34455555666666666666666665555443
No 144
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.06 E-value=0.00068 Score=67.73 Aligned_cols=153 Identities=12% Similarity=0.069 Sum_probs=110.8
Q ss_pred hHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhh-cCCCCCCCCchhH
Q 037418 11 AMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSY-EYKPECIGEGQKI 87 (427)
Q Consensus 11 g~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~-~~~~~~~~~~~~~ 87 (427)
-+. .+..++.+++|+|+.|.+.+..+=.....+.-++=|++.||+ |.|++-.++.++..+ .+- .... ...+.+
T Consensus 31 ~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~IP~~~~~~a~---~~~~~~ 106 (417)
T COG2223 31 TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLLIPCLGLAFAV---TYPSTW 106 (417)
T ss_pred HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHHc---cCCchH
Confidence 344 788999999999999999999999999999999999999996 878877788777666 111 1110 012224
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhceec---c---chhHhH
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-FCGVVLVPIIALIAFPYIK---P---WKIRFG 160 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y~~iNiG~~i~~~~~~~l~---g---~~~~F~ 160 (427)
.+++.-.+++++-|-+. .-.++...-|++++. -.... |-.-|+|..+...+.|++. | |+..-.
T Consensus 107 ~ll~~gll~G~~GasFa-v~m~~~s~~fP~~~q---------G~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~ 176 (417)
T COG2223 107 QLLVIGLLLGLAGASFA-VGMPNASFFFPKEKQ---------GLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAG 176 (417)
T ss_pred HHHHHHHHHhcccceeh-cccccccccCChhhh---------hHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45544455666655554 334566677876542 12222 6688999999999998886 7 888988
Q ss_pred HHHHHHHHHHHHHHhcc
Q 037418 161 IPAIFTVVATLVFLSGT 177 (427)
Q Consensus 161 i~~v~~~i~~iif~~~~ 177 (427)
+..+.++++.+.+++..
T Consensus 177 i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 177 IYVVALAIAAVLAWLGM 193 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88999988888877653
No 145
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.06 E-value=8.4e-05 Score=76.50 Aligned_cols=124 Identities=10% Similarity=0.020 Sum_probs=86.3
Q ss_pred HHHHHhhH-hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh--hcCC-CCCCCCchhHHH
Q 037418 14 VMITYLTN-VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS--YEYK-PECIGEGQKILF 89 (427)
Q Consensus 14 ~l~~yl~~-~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~--~~~~-~~~~~~~~~~~~ 89 (427)
.+...+.+ ++|++.+|.+.+.+++....-++.+..|++.||+ |.||++.++.++..+.. .... .+ ...+++.+
T Consensus 55 ~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~~--~~~s~~~l 131 (462)
T PRK15034 55 AVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQN--PNTPFGIF 131 (462)
T ss_pred HHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHcc--cCCCHHHH
Confidence 56677665 7999999999999988888888888899999996 99999988888876511 1110 00 01356778
Q ss_pred HHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-H-HHHHHHHHHHhhhhc
Q 037418 90 YTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-F-CGVVLVPIIALIAFP 150 (427)
Q Consensus 90 ~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y-~~iNiG~~i~~~~~~ 150 (427)
++...+.++| |..-+.....+.+.+++++ +..... + ..-|+|..++..+.+
T Consensus 132 li~r~l~Gig-g~~f~~~~~~vs~wfp~~~---------rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 132 IVIALLCGFA-GANFASSMGNISFFFPKAK---------QGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHH-HHhHHHHHHHHHHHCCHhH---------hHHHHHHHHHHHhhHHHHHHHHHH
Confidence 8888888888 5566778888888886543 222333 2 345666655544443
No 146
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.05 E-value=3.9e-05 Score=78.40 Aligned_cols=140 Identities=12% Similarity=0.022 Sum_probs=99.5
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhh--cCCCCC
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSY--EYKPEC 80 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~--~~~~~~ 80 (427)
...+++.-+. .+.+|.+..+|.++ ..+.+..+......+..++.++++||+ ||+|++..+..++.+... .+.+
T Consensus 236 ~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~-- 311 (428)
T PF13347_consen 236 LQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALGFLLLFFLG-- 311 (428)
T ss_pred HHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHHHHHHHHHH--
Confidence 3444555555 67788888888884 445556666777777888889999995 999999999988887211 1111
Q ss_pred CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhcee
Q 037418 81 IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 81 ~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l 152 (427)
..+.+.+++...+.++|.|...+...++.+|..|.++-+. .++++..+. -+...+|..++..+.+.+
T Consensus 312 --~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~t---g~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 312 --PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKT---GRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred --hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhc---CCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 1467788899999999999999999999999887543221 122333333 667788888887766654
No 147
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.04 E-value=4.4e-05 Score=78.81 Aligned_cols=137 Identities=12% Similarity=0.029 Sum_probs=95.7
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
-+++++.. .+..|+++.+|++..+++.+.........++.++.|++.||+ |||+.+.++..+..+....+........
T Consensus 268 ~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 346 (485)
T TIGR00711 268 GLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGFYWRAFTFTPDT 346 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 35667777 788899999999999999999888888889999999999995 9999998887776652111100000122
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
+.+.+.....+.++|.|..-+.......+..++++ +..... ....++|..+|+.+.+.+
T Consensus 347 ~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 347 PFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK---------IARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH---------HhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667888899999887777776666654332 222332 566788888776665543
No 148
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.03 E-value=5.4e-05 Score=77.96 Aligned_cols=155 Identities=15% Similarity=0.110 Sum_probs=88.4
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhccc-chHHHH-HHHHHHHHHhhhc--CCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTII-GNYWML-LVSSLAYSAVSYE--YKPECI 81 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~l-Gr~~~i-~~g~~~~~~~~~~--~~~~~~ 81 (427)
+.+|++. .+..|+++..|++..+++.+...+.....+..+++|+++||+- ||++.. .+...+..+.+.. ..+
T Consensus 267 ~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~--- 343 (452)
T PRK11273 267 LLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP--- 343 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc---
Confidence 3446666 6778888889999999988888888877888999999999963 444432 2222222221111 110
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHH-Hhhhhceec---cc
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPII-ALIAFPYIK---PW 155 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i-~~~~~~~l~---g~ 155 (427)
..+.+....++.+++.+....-+....+..|.++++. +.+... ....++|+.+ ++.+.+++. ||
T Consensus 344 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~ 413 (452)
T PRK11273 344 -AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA---------AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 413 (452)
T ss_pred -ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh---------hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcc
Confidence 1122223333333333222211122334456554432 223333 4556787654 688877775 99
Q ss_pred hhHhHHHHHHHHHHHHHHH
Q 037418 156 KIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~ 174 (427)
+.+|.+.++..+++++...
T Consensus 414 ~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 414 DGGFMVMIGGSILAVILLI 432 (452)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9999887777666654433
No 149
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.02 E-value=4e-05 Score=80.40 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHHHHHHHHHhhccccccc
Q 037418 29 RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVS 106 (427)
Q Consensus 29 ~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~ 106 (427)
+-+.+.+.+...+.+..++.|.++|++ |||++++++.+++.+ .+... ..+...+.+|..+.++|.|+....
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~------a~~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIAL------APSWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHhccchhhhhhc
Confidence 347888888889999999999999995 999999999999988 22222 236788999999999999999988
Q ss_pred ccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec----cchhHhHHHHHHH
Q 037418 107 IGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFT 166 (427)
Q Consensus 107 ~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~ 166 (427)
++-+++|.-+++. |....+.+ .+.+++|.+++..+....+ +|+..+++..+..
T Consensus 163 ~piy~sEiap~~~------RG~l~~~~-~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~ 219 (513)
T KOG0254|consen 163 APVYISEIAPAHI------RGTLVSLY-QLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPA 219 (513)
T ss_pred chhhHhhcCChhh------hHHHHHHH-HHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHH
Confidence 8888888643321 22233333 6888899999966666664 6887776544443
No 150
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.02 E-value=6.7e-05 Score=74.90 Aligned_cols=154 Identities=23% Similarity=0.252 Sum_probs=99.5
Q ss_pred HhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhccc-chHHHHHHHHHHHHH-hhhcC--CCCCCCCc
Q 037418 10 YAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTII-GNYWMLLVSSLAYSA-VSYEY--KPECIGEG 84 (427)
Q Consensus 10 Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~l-Gr~~~i~~g~~~~~~-~~~~~--~~~~~~~~ 84 (427)
||+. =.-+|+.+..|+|..+|+..++.|--.....+++.||++|+++ |||....+...+... .+... .+ ..
T Consensus 269 ~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~----~~ 344 (448)
T COG2271 269 YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP----NG 344 (448)
T ss_pred HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC----Cc
Confidence 5666 5678999999999999999999999999999999999999999 777655444333322 22221 11 23
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhceec---cchhHhH
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-FCGVVLVPIIALIAFPYIK---PWKIRFG 160 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y~~iNiG~~i~~~~~~~l~---g~~~~F~ 160 (427)
+..+..+.+.++++-.-+-.--+.....|.-+++. .-...+|. -++-=+|+..+....+++. ||..+|.
T Consensus 345 ~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A-------aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi 417 (448)
T COG2271 345 SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA-------AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFI 417 (448)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh-------ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHH
Confidence 44555555555555444443333333344433221 11345666 4444458888888888885 9998887
Q ss_pred HHHHHHHHHHHHHH
Q 037418 161 IPAIFTVVATLVFL 174 (427)
Q Consensus 161 i~~v~~~i~~iif~ 174 (427)
+-.++.+++.+.++
T Consensus 418 ~~~~~a~l~~lll~ 431 (448)
T COG2271 418 VLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555555555444
No 151
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.01 E-value=0.00015 Score=72.22 Aligned_cols=150 Identities=7% Similarity=-0.094 Sum_probs=87.7
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
.|+.+..|++..+++.+.........+..+++|+++||+ ||||++.++..+..+ .+....... ...+.+...++..+
T Consensus 219 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 296 (377)
T PRK11102 219 FVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVVSAL-LDLGFWALVVGVAA 296 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 456677899999999999999999999999999999995 999999988766443 111100000 01123344455555
Q ss_pred HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec-cchhHhHHHHHHHHHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK-PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 96 i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~-g~~~~F~i~~v~~~i~~iif~ 174 (427)
...+.+...++......|..++... ...+..+.....+|+.+++.+..... +++..+.+.+++.+.+.+.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPHMAG-------TASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCSILSILFYL 369 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccccch-------HHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666666665442211 11222222334467777766544333 333334444455455544444
Q ss_pred h
Q 037418 175 S 175 (427)
Q Consensus 175 ~ 175 (427)
.
T Consensus 370 ~ 370 (377)
T PRK11102 370 Y 370 (377)
T ss_pred H
Confidence 3
No 152
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.00 E-value=5.8e-05 Score=75.26 Aligned_cols=158 Identities=14% Similarity=0.001 Sum_probs=96.1
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCC-CCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKP-ECIGE 83 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~-~~~~~ 83 (427)
+|-|+. -+..|+++++|.+..+|+.+...+....-+.-.+||+||||+ |.+|...+....+.+ .+....+ .....
T Consensus 233 ~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~ 311 (417)
T COG2223 233 GFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALAAALLSLFLTGFGHG 311 (417)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHHHHHHHccccccccC
Confidence 466788 899999999999999999999999999999999999999996 666666665555554 2222211 11111
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec----cchhHh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK----PWKIRF 159 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~----g~~~~F 159 (427)
.+...++.....+.+-.|.=+..+..++-..++++.. --.++-=..-++|.+.=|...+... +++.+|
T Consensus 312 ~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G--------~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f 383 (417)
T COG2223 312 GSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETG--------AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAF 383 (417)
T ss_pred cchHHHHHHHHHHHHHhccCcchheeechHHHHhhhh--------HHHHHHHHhccccccchhHHHHHHHHhcccHHHHH
Confidence 3334444444444444554444455555544433211 0111112334555554444444443 488888
Q ss_pred HHHHHHHHHHHHHHH
Q 037418 160 GIPAIFTVVATLVFL 174 (427)
Q Consensus 160 ~i~~v~~~i~~iif~ 174 (427)
.+-....+++.+...
T Consensus 384 ~~~~~~~~~a~v~~~ 398 (417)
T COG2223 384 MLLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777666665544
No 153
>PRK10133 L-fucose transporter; Provisional
Probab=97.99 E-value=5.9e-05 Score=77.50 Aligned_cols=142 Identities=14% Similarity=0.046 Sum_probs=99.1
Q ss_pred HHHHHh-hHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHH
Q 037418 14 VMITYL-TNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl-~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~ 90 (427)
-+..|+ ++.+|++..+++..+..+.....+..+++|++.||+ |+||++..+..+..+. +..+. . .. .-.
T Consensus 280 ~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~-----~-~~-~~~ 351 (438)
T PRK10133 280 YLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISAFA-----G-GH-VGL 351 (438)
T ss_pred HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHc-----C-Ch-HHH
Confidence 345565 567899999999999999999999999999999995 9999998887665542 11111 1 11 224
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---c-chhHhHHHHHHH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---P-WKIRFGIPAIFT 166 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g-~~~~F~i~~v~~ 166 (427)
.++.+.++|.|.+.|++.+...+..+++... -.+... + .-+|..+++.+.+++. | -+.+|.++.++.
T Consensus 352 ~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~-------as~l~~-~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~ 422 (438)
T PRK10133 352 IALTLCSAFMSIQYPTIFSLGIKNLGQDTKY-------GSSFIV-M-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCF 422 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhcc-------chhHHh-H-HhccchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 5678899999999999999999987653211 122332 1 2245556666666664 5 678888777766
Q ss_pred HHHHHH
Q 037418 167 VVATLV 172 (427)
Q Consensus 167 ~i~~ii 172 (427)
+.....
T Consensus 423 ~~~~~~ 428 (438)
T PRK10133 423 AVIFIF 428 (438)
T ss_pred HHHHHH
Confidence 544433
No 154
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.98 E-value=0.00011 Score=73.89 Aligned_cols=156 Identities=13% Similarity=-0.010 Sum_probs=96.2
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHH-HHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCC-CCCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWG-TVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYK-PECI 81 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~-~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~-~~~~ 81 (427)
+.+..+.. ....|+.+ +|++..+.+.+...... ...+..+++|+++||+ |++|.+.++..+..+ .+.... ....
T Consensus 221 ~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T TIGR02718 221 AMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLALLWFAQAAFW 298 (390)
T ss_pred HHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34444455 56678875 79999999998887765 4456688999999995 999999887765522 111000 0000
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cch
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWK 156 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~ 156 (427)
........+....+.+++.|...+...+...+..++++. +.+.+. ....++|..+++.+++++. ||+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~ 370 (390)
T TIGR02718 299 LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ--------AGTDVTAVQSTRDLGELIASSIAGYLTDRFGYA 370 (390)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 001122222223333445566666666666665443111 223333 4566999999999988886 898
Q ss_pred hHhHHHHHHHHHHHH
Q 037418 157 IRFGIPAIFTVVATL 171 (427)
Q Consensus 157 ~~F~i~~v~~~i~~i 171 (427)
..|.++++..+++.+
T Consensus 371 ~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 371 GGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899887776666543
No 155
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.97 E-value=0.00011 Score=74.89 Aligned_cols=149 Identities=6% Similarity=-0.082 Sum_probs=87.2
Q ss_pred hhHHHHHHhHH-HHHHHhhH-hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHH-HHHHHHHHHHhhhcCCCC
Q 037418 3 WADIFAAYAMW-VMITYLTN-VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWM-LLVSSLAYSAVSYEYKPE 79 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~-~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~-i~~g~~~~~~~~~~~~~~ 79 (427)
++.-.+++++. -+-.|+++ ..|++..+++...........+..+++|+++||+ |||+. +....++..+.+.....
T Consensus 252 ~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~~~~~~~- 329 (412)
T TIGR02332 252 FCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAGWLLASA- 329 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHHHHHHHh-
Confidence 34455677777 67788876 3577888888888888888889999999999995 76664 33333333321111110
Q ss_pred CCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----
Q 037418 80 CIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---- 153 (427)
Q Consensus 80 ~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---- 153 (427)
..+....+.++.+.+.|....-+.......+.+++ ++ +...+. +...|+|.++++.+.+.+.
T Consensus 330 ---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~------~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 330 ---TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL---QA------RAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred ---cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccch---HH------HHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 01112222233333333322212222222333322 11 344444 7888999999998888776
Q ss_pred cchhHhHHHHHH
Q 037418 154 PWKIRFGIPAIF 165 (427)
Q Consensus 154 g~~~~F~i~~v~ 165 (427)
+|+.+|.++++.
T Consensus 398 ~~~~~~~~~~~~ 409 (412)
T TIGR02332 398 SFNSGLWFVAAL 409 (412)
T ss_pred CCchhHHHHHHH
Confidence 599998876654
No 156
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00036 Score=71.94 Aligned_cols=134 Identities=14% Similarity=0.136 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccc
Q 037418 31 AAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGG 109 (427)
Q Consensus 31 ~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~ 109 (427)
+.+++.|.....++.+++|++|||+ |||++++++.++..+ .+..... ........+.+|..+.++..|......+-
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s--~~~~~~e~li~GR~i~Gl~~gl~~~~~pm 139 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLS--KSAPSFEMLILGRLIVGLACGLSTGLVPM 139 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3455666667778888999999996 999999999888776 2221110 01235668889999999999999999999
Q ss_pred hhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh-c-eec---cchhHhHHHHHHHHHHHHHHH
Q 037418 110 FMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAF-P-YIK---PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 110 ~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~-~-~l~---g~~~~F~i~~v~~~i~~iif~ 174 (427)
++.|.-+++- |. .-+.++-.++++|.+++..++ + .++ .|++.++.+.+...+.++...
T Consensus 140 yl~E~sP~~~------RG-~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~ 202 (485)
T KOG0569|consen 140 YLTEISPKNL------RG-ALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP 202 (485)
T ss_pred HHhhcChhhh------cc-HHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 9998654432 11 223333688889998884443 2 232 799999988887666665543
No 157
>TIGR00895 2A0115 benzoate transport.
Probab=97.95 E-value=8.1e-05 Score=74.03 Aligned_cols=132 Identities=17% Similarity=0.027 Sum_probs=91.1
Q ss_pred HHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchh
Q 037418 7 FAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQK 86 (427)
Q Consensus 7 fs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 86 (427)
+++++......|+.+.+|++..+++.+.........++.+++|+++||+ ||++.+................ ..+.
T Consensus 264 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~ 338 (398)
T TIGR00895 264 VGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFAVLVGST----LFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHH----hhCH
Confidence 3444444222366678899999999999999999999999999999995 8885544333333221111100 1234
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
+..+....+.+++.+...+...+...|.++++. +...++ +...++|..+++.+.+++
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI---------RATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH---------HHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 556677788889999999999999999876532 334444 667789999888887764
No 158
>PRK10504 putative transporter; Provisional
Probab=97.95 E-value=0.00014 Score=74.93 Aligned_cols=136 Identities=14% Similarity=0.031 Sum_probs=90.0
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hh-cCCCCCCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SY-EYKPECIG 82 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~-~~~~~~~~ 82 (427)
.+++.... ...+|++..+|.+..+++.+.........+..++.|.++||+ |||+++..+..+..+. +. ...+ .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~---~ 349 (471)
T PRK10504 274 RIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVSLLFMLVA---L 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhcc---c
Confidence 34443333 566777777999999999888877777777778899999996 9999999888766652 11 1111 0
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l 152 (427)
....+.+...+.+.++|.|..-+...++..+..++++. ....+.+ ....++|..+|+.+++.+
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------g~~~~~~-~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLA------SSGNSLL-SMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhc------cchHHHH-HHHHHHHHHHHHHHHHHH
Confidence 12233334556667788888888878888776654321 1112222 677778888877776655
No 159
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.95 E-value=7.6e-05 Score=77.85 Aligned_cols=138 Identities=12% Similarity=0.013 Sum_probs=97.9
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
-+++++.. .+..|+++..|++..+++...........+..+++|++.||+ |+|+.+..|..+..+....+.. .....
T Consensus 272 ~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~~~l~~-~~~~~ 349 (495)
T PRK14995 272 MITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSFYGLAM-TDFST 349 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHH-hcCCC
Confidence 34677777 778899999999999999999999999999999999999995 9999888887776552211100 00012
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l 152 (427)
+.+..+..+.+.++|.|..-+.......+..++++.. ..........|+|..+|+.+.+.+
T Consensus 350 ~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 350 QQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAA-------AAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcc-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566788899999998887877777765443311 222222577889988887666544
No 160
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.94 E-value=0.0003 Score=71.13 Aligned_cols=130 Identities=10% Similarity=-0.022 Sum_probs=85.3
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~ 91 (427)
....|+.+.+|++..+++...........+..++.|+++||+ |++|.+.++.++..+.+.. ..+ .....+.+.+.+
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~ 314 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAALAT-VISSHAYLWLTA 314 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH-HcccccHHHHHH
Confidence 456677788999999888776666666777888999999995 9999998887765541111 100 000123445667
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~ 153 (427)
++.+.++|.|...|...+...+..+ ++ +.+..+.+ .+..++|..+|+.+.+++.
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~-~~~~~~~~~~g~~~~~~l~ 368 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVSAAM-GMLSMLIFTVGIELSKHAY 368 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHHHHH-HHHHHHHHHHHHHHHHhcc
Confidence 8888999999888777665543322 11 11122333 5667788888888888774
No 161
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.93 E-value=4.7e-05 Score=72.15 Aligned_cols=140 Identities=13% Similarity=0.079 Sum_probs=100.7
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALG 94 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 94 (427)
-++.++++|+|.+.|+.+.+..-+.......+-|.+.|++ |+.-..+.+..+..+ .-..+. .+.+.-|+++.
T Consensus 288 ~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~tl~~H~~l~------Ft~lsPy~~m~ 360 (459)
T KOG4686|consen 288 PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILTLLGHSGLF------FTFLSPYTSMT 360 (459)
T ss_pred HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHHHHHhhhHH------hhhccHHHHHH
Confidence 3577889999999999999887777777777889999996 888777666555544 222121 12334467888
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cch--hHhHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWK--IRFGIPAIFT 166 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~--~~F~i~~v~~ 166 (427)
++++...+.....-++++...++++ +...|. |...|+|-.+.+++++.+. ||. -+|.+....|
T Consensus 361 ~lGLsysllAcslWP~va~~vpE~q---------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~ 431 (459)
T KOG4686|consen 361 FLGLSYSLLACSLWPCVASLVPEEQ---------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLM 431 (459)
T ss_pred HHhhhHHHHHHHHhhhhhhhCCHHH---------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHH
Confidence 8888887776667777777665543 566676 8999999999999999997 343 3566666666
Q ss_pred HHHHH
Q 037418 167 VVATL 171 (427)
Q Consensus 167 ~i~~i 171 (427)
.+..+
T Consensus 432 aL~sv 436 (459)
T KOG4686|consen 432 ALTSV 436 (459)
T ss_pred HHHHH
Confidence 55443
No 162
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.92 E-value=9.7e-05 Score=72.56 Aligned_cols=133 Identities=11% Similarity=-0.038 Sum_probs=95.5
Q ss_pred HHHHhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 7 FAAYAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 7 fs~Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
+.++++. .+..|+++.+|.+..+++.+.........+..+++|++.||+ ||++.+..+..+..+....... . ..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~- 299 (365)
T TIGR00900 224 LVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLAILVVGL-T-PP- 299 (365)
T ss_pred HHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHh-h-ch-
Confidence 4455554 345556666999999999999988888889999999999995 9999888776555542211110 0 01
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
+.+.+++...+.+++.+...+...++..|..++++ +.+.++ +...++|..+++.+.+++
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL---------LGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666778888999999999999999998876533 334444 677888888888877765
No 163
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.91 E-value=5.8e-05 Score=77.36 Aligned_cols=152 Identities=13% Similarity=0.039 Sum_probs=88.6
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hh--hcCCCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VS--YEYKPECI 81 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~--~~~~~~~~ 81 (427)
.+|++. .+..|+++..|++..+++.+...+.....++.+++|+++||+ |+++....+..+..+ .+ ....+
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 341 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIAVIVYWMNP--- 341 (438)
T ss_pred HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHhcC---
Confidence 345666 567888888899999999998888888899999999999996 543322223222111 11 11111
Q ss_pred CCchhHHHHHHHHHHHhhcccccccc--cchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHH-HHHHhhhhceec---
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSI--GGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLV-PIIALIAFPYIK--- 153 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~--~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG-~~i~~~~~~~l~--- 153 (427)
..+.+.....+..+ |.+..-+.. .....|.+++++ +..... +...++| .++++.+.+++.
T Consensus 342 -~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~ 409 (438)
T TIGR00712 342 -AGNPLVDMICMIVI--GFLIYGPVMLIGLHALELAPKKA---------AGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 409 (438)
T ss_pred -CCchHHHHHHHHHH--HHHHccHHHHHHHHHHHhcChhh---------eeeehhhhchHHHhhhhhhcchhHHHHHHhc
Confidence 11222222333333 333222322 334556554332 222333 3555666 467888877765
Q ss_pred cchhHhHHHHHHHHHHHHHHHh
Q 037418 154 PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif~~ 175 (427)
||..+|.+.++..+++.+..+.
T Consensus 410 g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 410 GWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 8999998777776666665553
No 164
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.91 E-value=0.00028 Score=71.34 Aligned_cols=145 Identities=9% Similarity=0.016 Sum_probs=92.5
Q ss_pred HHhhHhcCCchHHHHHHHHHHHH-HHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hh----cCCCCCCCCchhHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWG-TVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SY----EYKPECIGEGQKILFY 90 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~-~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~ 90 (427)
.|+.+.+|++..+.+.+...... ...+..+++|++.||+ ||+|.+.++.....+. +. ... ..+.+.+.
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~-----~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT-----PKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcHHHHH
Confidence 46667799999999888766554 4677789999999995 9999887776655441 11 111 11233344
Q ss_pred HHH----HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 91 TAL----GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 91 ~~l----~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
.+. ...+++.+..-+....++.+.+++++ . ..+ ....++|..++..+++++. ||+..|.+.+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~-~~~-~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~ 376 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQ---------Y-ALL-SALASVGRVYVGPTSGYLVEAYGWPGFYLMTV 376 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH---------H-HHH-HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 333 24456666667777777777655332 1 122 2233567765555666665 9999999988
Q ss_pred HHHHHHHHHHHhccc
Q 037418 164 IFTVVATLVFLSGTC 178 (427)
Q Consensus 164 v~~~i~~iif~~~~~ 178 (427)
+...++.++.....+
T Consensus 377 ~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 377 VIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888777766544333
No 165
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.90 E-value=0.0002 Score=71.93 Aligned_cols=148 Identities=10% Similarity=-0.063 Sum_probs=96.8
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchh
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQK 86 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~ 86 (427)
++.++. .+..|+. +.|++..+++.+.+.......+..++.|++.||+ |+++.+.++.....+...... ...+.
T Consensus 220 ~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~~~~~----~~~~~ 293 (382)
T PRK11128 220 SHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRWGLMG----STTAL 293 (382)
T ss_pred HhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHH----hhhhH
Confidence 334455 5667875 5899999999888877777777888999999995 999999888877766222111 02345
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
+.+++...+.+++.+...+....+..++ ++++ +......++-...++|..+|+.+.+++. |+. .|...+
T Consensus 294 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~ 365 (382)
T PRK11128 294 PWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMA 365 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHH
Confidence 6667778888888888888777777664 2211 1111222222445678788898888886 553 444434
Q ss_pred HHHHHH
Q 037418 164 IFTVVA 169 (427)
Q Consensus 164 v~~~i~ 169 (427)
+..+++
T Consensus 366 ~~~~~~ 371 (382)
T PRK11128 366 LVALPA 371 (382)
T ss_pred HHHHHH
Confidence 333333
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.90 E-value=6.5e-05 Score=74.12 Aligned_cols=140 Identities=16% Similarity=0.060 Sum_probs=85.0
Q ss_pred HHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHH--HHHhhhcCCCCCCCCch
Q 037418 9 AYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLA--YSAVSYEYKPECIGEGQ 85 (427)
Q Consensus 9 ~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~--~~~~~~~~~~~~~~~~~ 85 (427)
++++. .+..|+++.+|++..+++.+...+.....+..+++|+++||..+|++........ ..+.+..... . ...+
T Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 309 (379)
T TIGR00881 232 RTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL-N-PAAN 309 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc-C-cchh
Confidence 34455 5778888889999999999999999888999999999999865555433222111 1111111100 0 0112
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHh
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRF 159 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F 159 (427)
.........+.+...+..-+....+..|..+++. +...+. ....++|..+++.+.+++. ||+.+|
T Consensus 310 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 310 PLMDLICLFALGFLVYGPQMLIGVIASELAPKKA---------AGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch---------hHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 2333344444444444444455566667665432 233444 5678899999988888776 676554
No 167
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.88 E-value=0.00025 Score=70.52 Aligned_cols=106 Identities=8% Similarity=0.050 Sum_probs=74.8
Q ss_pred HHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCch
Q 037418 9 AYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEGQ 85 (427)
Q Consensus 9 ~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~~ 85 (427)
++++. .+..|+.+++|.++.+++.+.........+..+++|++.||+ |||+.+.++..+..+.... ..... ....
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 299 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLEITAIL-GLGS 299 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHh-ccch
Confidence 34444 455677788999999999999888888889999999999995 9999988887665551111 10000 0112
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
.........+.++|.+...+...+...|..+
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 330 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFP 330 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 3344555677888999988888888777654
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.87 E-value=0.00021 Score=72.49 Aligned_cols=124 Identities=10% Similarity=-0.013 Sum_probs=80.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-hcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-YEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (427)
.+..|+.+ .|++..+++.+.........+..+++|+++||+ ||++.+..+.++..+.+ ..... . ..... ..+
T Consensus 253 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~--~~~ 325 (426)
T PRK12307 253 LLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI-P--QDNYL--LLG 325 (426)
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH-c--cccHH--HHH
Confidence 45667765 699999999888888888889999999999995 99999988877665522 11110 0 11111 122
Q ss_pred HHHHHh--hcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 93 LGLIAF--GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 93 l~li~~--g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
..+.++ +..+..+....++.|.++++. +.+... +...++|..+++.+.+++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 326 ACLFGLMATNVGVGGLVPKFLYDYFPLEV---------RGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHhCcHHH---------HhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 222222 223333445566777776432 233333 6778889999999988886
No 169
>PRK10054 putative transporter; Provisional
Probab=97.86 E-value=0.00011 Score=74.39 Aligned_cols=148 Identities=14% Similarity=0.034 Sum_probs=98.7
Q ss_pred HHHHHhhH--hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTN--VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~--~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
.+..|+.. +.+.+....+.+...+...........|.+.||+ |+++.+..+..+..+.+..+.. ...+.+.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~ 303 (395)
T PRK10054 228 CISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGLVGFIF---SGNSLLLWGM 303 (395)
T ss_pred hHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHHHHHHH---cchHHHHHHH
Confidence 34455543 3455566666777777666666667778999996 9999888887766652211110 0123455566
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHH
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTV 167 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~ 167 (427)
+..+.++|.+...|+..+++.+.-+++. +.+.++ +...++|..+|+.+.+++. |++..|.+-++..+
T Consensus 304 ~~~~~~~g~~~~~p~~~~~~~~~~p~~~---------~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~ 374 (395)
T PRK10054 304 SAAVFTVGEIIYAPGEYMLIDHIAPPGM---------KASYFSAQSLGWLGAAINPLVSGVILTTLPPWSLFVILALAIV 374 (395)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCccc---------ceehHhHHHHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHH
Confidence 7788999998888888888887654422 344555 6666789999999988886 88888877666665
Q ss_pred HHHHHHH
Q 037418 168 VATLVFL 174 (427)
Q Consensus 168 i~~iif~ 174 (427)
++.+.-+
T Consensus 375 ~~~~~~~ 381 (395)
T PRK10054 375 AAWLLML 381 (395)
T ss_pred HHHHHHH
Confidence 5554444
No 170
>PRK09848 glucuronide transporter; Provisional
Probab=97.83 E-value=0.00014 Score=74.64 Aligned_cols=158 Identities=12% Similarity=0.052 Sum_probs=97.9
Q ss_pred HHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCch
Q 037418 9 AYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEGQ 85 (427)
Q Consensus 9 ~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~~ 85 (427)
+++.. ....|+++.+|.+...+............+..++.++++||+ |+++++.+|.++..+.... ..+ ..+
T Consensus 244 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~~~~~~~~----~~~ 318 (448)
T PRK09848 244 TFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGYLLFFWVS----VWS 318 (448)
T ss_pred HHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcC----chh
Confidence 33444 455667777887766555433332334556777889999995 9999999998776652211 111 224
Q ss_pred hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHH-HH--HHHHHHHHHHHhhhhcee-c--cc----
Q 037418 86 KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFF-FS--FCGVVLVPIIALIAFPYI-K--PW---- 155 (427)
Q Consensus 86 ~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~-f~--Y~~iNiG~~i~~~~~~~l-~--g~---- 155 (427)
.+.++.++.+.++|.+...+...++.+|..|+++-+. .++++.. ++ -++.++|..+|+.+.+.+ + ||
T Consensus 319 ~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~---g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~ 395 (448)
T PRK09848 319 LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLT---GVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQ 395 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh---CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 5566677888999999999999999998766443210 0112222 22 466778888777665543 1 43
Q ss_pred ----------hhHh-HHHHHHHHHHHHHHH
Q 037418 156 ----------KIRF-GIPAIFTVVATLVFL 174 (427)
Q Consensus 156 ----------~~~F-~i~~v~~~i~~iif~ 174 (427)
+..+ .+|+++++++.+++.
T Consensus 396 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 425 (448)
T PRK09848 396 VQTPEVIMGIRTSIALVPCGFMLLAFVIIW 425 (448)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2232 467777766666553
No 171
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.83 E-value=0.00025 Score=71.68 Aligned_cols=144 Identities=13% Similarity=0.004 Sum_probs=96.9
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-hcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-YEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 92 (427)
.+..|+.+.+|++..+++.+.........+..++.|.+.|+. ++++.+..+..+....+ ... ..+.+...+.
T Consensus 227 ~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~ 299 (393)
T PRK11195 227 LVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILMGLVVLLMAL------QHSLLPAYPL 299 (393)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHHHHHHHHHHH------HhHHHHHHHH
Confidence 455688888999999999999888888888899999999985 88888877754332211 111 1234445566
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhHhHHHHHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIRFGIPAIFTVV 168 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~F~i~~v~~~i 168 (427)
+.+.+++.|.+.+...+...+. .+++.+ +.+.+. ....|+|..++..+.+.+. |=+..+.+.+++.++
T Consensus 300 ~~~~G~~~g~~~~~~~~~~q~~-~~~~~~-------~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (393)
T PRK11195 300 LILIGALGGFFVVPMNALLQHR-GHVLVG-------AGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHHhhhhhhhhHHHHHHhh-Cccccc-------chhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7788899999888888887553 222110 233333 6888888888877777665 656666665555555
Q ss_pred HHHH
Q 037418 169 ATLV 172 (427)
Q Consensus 169 ~~ii 172 (427)
+..+
T Consensus 372 ~~~~ 375 (393)
T PRK11195 372 ALAM 375 (393)
T ss_pred HHHH
Confidence 5444
No 172
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.83 E-value=0.00056 Score=70.52 Aligned_cols=157 Identities=15% Similarity=0.079 Sum_probs=92.7
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH--------HHHHHHHHH--HHhh
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW--------MLLVSSLAY--SAVS 73 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~--------~i~~g~~~~--~~~~ 73 (427)
.-+++|++. -+-.|+++.+|++..+++...........++.+++|+++||. ++++ .+..+.... .+..
T Consensus 273 ~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (465)
T TIGR00894 273 HFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIFNGIGGLGPGIFA 351 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 334555655 677888889999999999998888888899999999999985 3321 111111111 1111
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhce
Q 037418 74 YEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPY 151 (427)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~ 151 (427)
..... . ..+.......+.+.+.+.++..++......|.. ++. ...... ....++|.++++.+.++
T Consensus 352 ~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~------~g~~~g~~~~~~~l~~~i~p~l~g~ 418 (465)
T TIGR00894 352 YALPY-L--SAAFYLTIIILTLANAVSSGPLAGVLINSLDLA----PRF------LGFIKGITGLPGFIGGLIASTLAGN 418 (465)
T ss_pred HHHHH-c--CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC----hhH------HHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 00000 0 112222333344444444444454443333322 211 222222 67778888889888887
Q ss_pred ec------cchhHhHHHHHHHHHHHHHHHh
Q 037418 152 IK------PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 152 l~------g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+. +|..+|.+.++..+++.+++..
T Consensus 419 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 419 ILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred eeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 64 3888999888888888766654
No 173
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.81 E-value=0.00017 Score=82.82 Aligned_cols=137 Identities=8% Similarity=-0.035 Sum_probs=96.2
Q ss_pred HHHHHhhHhcCCchH-HHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNVWKISLV-RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~-~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.+..|+.+.+|++.. +++.+.........++.++.|+++||+ ++++.+.++.++..+.+..+.. ..+.+.+.+.
T Consensus 254 ~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 328 (1146)
T PRK08633 254 NFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLPT----APSLASVLVL 328 (1146)
T ss_pred hhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHHH----hhhHHHHHHH
Confidence 567788888999999 888888888888888999999999995 8888888877766652222210 1245566677
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cchhHhHHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PWKIRFGIPAI 164 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v 164 (427)
..+++++.|+..+...+++.+..+++. +.+.++ .+..++|.++++.+.+.+. ++...|.+.+.
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~p~~~---------rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 329 FFLFGFSAGLFIVPLNALIQFRAPEKE---------LGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHhhHHHHHHHhhcCCccc---------hhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 888899999999888898887765543 233444 5667777766665555443 44445554443
No 174
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.80 E-value=0.00019 Score=71.08 Aligned_cols=134 Identities=10% Similarity=-0.011 Sum_probs=88.8
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
-+.|+++. .+..|+++ .|++..+++.+...+.....+..+++|+++||+-+|++++.++..+..+....+.. ...
T Consensus 210 ~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 285 (355)
T TIGR00896 210 SGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF---APM 285 (355)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH---hhh
Confidence 34566666 66778765 69999999999999999999999999999999645666777776665552211110 011
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
+ ... ....+.++|.|...|...+...+..+++ ++ +...+. +...++|..+++.+.+++.
T Consensus 286 ~-~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~--~~------~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 286 H-GLW-AWALVLGLGQGGAFPLALTLIGLRSRQA--AQ------AAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred h-HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH--HH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 2356788999999988877777654332 11 222333 4556777788888877765
No 175
>PRK09669 putative symporter YagG; Provisional
Probab=97.77 E-value=0.00024 Score=72.90 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hh-hcCCCCCCCCchhHHHHHHHHHHHhhcccccccccch
Q 037418 33 IVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VS-YEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGF 110 (427)
Q Consensus 33 ~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~ 110 (427)
+.........+..++.++++||+ ||++++.++.....+ .+ ..+.+ ..+.+.+++...+.++|.+...+...++
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFIP----PSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445556777889999995 999999888765553 11 11111 2345567777888999999999999999
Q ss_pred hcccCCcchhhhhhhhhhHHH-HHH--HHHHHHHHHHHhhhhcee
Q 037418 111 MADQMTDSRAEQVSMRSAKLF-FFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 111 ~~dq~~~~~~~~~~~~~~~~~-~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
.+|..|.++.+. .++++. .|+ .++.++|..+|+.+++++
T Consensus 344 ~ad~~d~~e~~~---G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 344 FSDVVDYEEKRS---GRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHhhhhhhhhhc---CcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999876433211 111222 233 667899999988877765
No 176
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.76 E-value=0.00025 Score=69.34 Aligned_cols=128 Identities=19% Similarity=0.087 Sum_probs=94.1
Q ss_pred HHHHhHH-HHHHHhhHhcCCc-hHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hhcCCCCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKIS-LVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SYEYKPECIGE 83 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~-~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~~~~~~~~~~ 83 (427)
+.++++. .+..|+.+.+|++ ..+++.+.........+..++.|+++|| +|+++.+.+......+. +..... ...
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 296 (352)
T PF07690_consen 220 FVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLL--PFS 296 (352)
T ss_dssp HHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCS--HHH
T ss_pred HHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHH--HHh
Confidence 3555666 6778888999999 8999988999999888999999999999 59888777777666652 111110 001
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHh
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIAL 146 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~ 146 (427)
.+....+..+.+.+++.|...+...++..|..++++ +.+.+. ....++|..+||
T Consensus 297 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 297 SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY---------RGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH---------HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHCC
Confidence 234556668888999999999999999999886543 233333 677888888875
No 177
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.75 E-value=0.00065 Score=68.70 Aligned_cols=147 Identities=8% Similarity=0.020 Sum_probs=95.3
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhhcCCCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEYKPECIG 82 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~~~~~~~ 82 (427)
.+++++. .+..++.+++|++..+++.+...+.....+..++.|++.||. + ++.+..+..+..+ .+...
T Consensus 230 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~-~~~l~~~~~~~~~~~~~l~~~------ 301 (394)
T PRK10213 230 AGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-V-KLALAGAPLVLAVSALVLTLW------ 301 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-c-hhHHHHHHHHHHHHHHHHHHH------
Confidence 3445554 332333457899999999999988888889999999999993 4 4444444333332 11112
Q ss_pred CchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHh
Q 037418 83 EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRF 159 (427)
Q Consensus 83 ~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F 159 (427)
..+.+.+..+..+.++|.+...+...+++.+..+++..+ ..+.. +...++|..+|+.+.+++. |+...|
T Consensus 302 ~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~lg~~~G~~l~G~l~~~~g~~~~~ 373 (394)
T PRK10213 302 GSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEK-------AGSIQ-VAVIQLANTCGAAIGGYALDNIGLTSPL 373 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHH-------HHHHH-HHHHHHHHHHHHHHHHHHHhccChhhHH
Confidence 123456666778888999999988888888766533211 12222 4556788888888888775 777777
Q ss_pred HHHHHHHHHH
Q 037418 160 GIPAIFTVVA 169 (427)
Q Consensus 160 ~i~~v~~~i~ 169 (427)
..+++...+.
T Consensus 374 ~~~~~~~~~~ 383 (394)
T PRK10213 374 MLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHH
Confidence 7766554433
No 178
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.75 E-value=0.00051 Score=70.77 Aligned_cols=163 Identities=13% Similarity=-0.025 Sum_probs=85.2
Q ss_pred HHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-h--cCCCCCCCCc
Q 037418 9 AYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-Y--EYKPECIGEG 84 (427)
Q Consensus 9 ~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-~--~~~~~~~~~~ 84 (427)
|-|+. -+-.|+++.+ +...+............+..++||++|||+ |++|++.++.+...+.. + ...+. ....
T Consensus 268 fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~~~~~l~lp~-~~~~ 343 (462)
T PRK15034 268 FIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFSALLFLTLPG-TGSG 343 (462)
T ss_pred HHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHhcc-cccc
Confidence 33444 4556666644 333333333344556677888999999995 99999998887666521 1 11111 1123
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcc----------hhhhhhhhhhHHHH-HHHHHH---HHHHHHHhhhhc
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDS----------RAEQVSMRSAKLFF-FSFCGV---VLVPIIALIAFP 150 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~----------~~~~~~~~~~~~~~-f~Y~~i---NiG~~i~~~~~~ 150 (427)
+.+.+..++..+.+..|.=+..+..++.+.++++ ++++..++.+++.+ -+=+.. .+|.++-|.+.+
T Consensus 344 ~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g 423 (462)
T PRK15034 344 NFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFG 423 (462)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHH
Confidence 4566666666665666666666666666656531 11110001111211 111111 222233332222
Q ss_pred ee-c---cchhHhHHHHHHHHHHHHHHHh
Q 037418 151 YI-K---PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 151 ~l-~---g~~~~F~i~~v~~~i~~iif~~ 175 (427)
.. + +|..+|..-.+..++++++-+.
T Consensus 424 ~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 424 MSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 22 2 6888888888877777766554
No 179
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.70 E-value=0.00021 Score=70.76 Aligned_cols=113 Identities=11% Similarity=0.046 Sum_probs=83.8
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHH-HHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc---CCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWG-TVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE---YKPE 79 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~-~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~---~~~~ 79 (427)
-.+++++.. .+..|+++ +|++..+++.+.++... ...+..+++|+++||+ ||+|.+.++.++..+..+. ..+.
T Consensus 221 ~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (356)
T TIGR00901 221 YKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALTNAGFVWLASN 298 (356)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467888888 88888887 99999999988887764 4568889999999995 9999998888776652221 1100
Q ss_pred C----CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcch
Q 037418 80 C----IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSR 119 (427)
Q Consensus 80 ~----~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~ 119 (427)
. ....+.+.+..+..+.+++.|...+...++..+..+++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 342 (356)
T TIGR00901 299 GHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF 342 (356)
T ss_pred CcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc
Confidence 0 000234555566777899999999999999999887654
No 180
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.68 E-value=0.00028 Score=71.14 Aligned_cols=146 Identities=12% Similarity=0.048 Sum_probs=91.3
Q ss_pred HHHHhhHhc---CCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHH
Q 037418 15 MITYLTNVW---KISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYT 91 (427)
Q Consensus 15 l~~yl~~~l---~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
+..|+++.+ +.+....+.+.+.......+..+..|++.||+ |||+.+.++..++.+....... ..+.+.+++
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~----~~~~~~~~~ 312 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSF----ATTALEVVI 312 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHh----cCChHHHHH
Confidence 456776655 45555666666666666677778889999995 9999999988877662211110 123444555
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHH-HHHHHHHHHHHHHHHhhhhceec---cchhHhHHHHHHHH
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKL-FFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTV 167 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~-~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~ 167 (427)
...+.+++.+........+..++.+++.. .... ..+ ....++|..+++.+.+++- ||+..|.+.++..+
T Consensus 313 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~------at~~~~~~-~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~ 385 (396)
T TIGR00882 313 LKMLHAFEVPFLLVGCFKYITSQFDVRLS------ATIYLIGF-QFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVL 385 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcceE------EEeehHHH-HHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHH
Confidence 66666666554443333444444332210 0001 113 3678999999999999885 89999998777776
Q ss_pred HHHHH
Q 037418 168 VATLV 172 (427)
Q Consensus 168 i~~ii 172 (427)
++.++
T Consensus 386 i~~~~ 390 (396)
T TIGR00882 386 LFTLI 390 (396)
T ss_pred HHHHH
Confidence 66544
No 181
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0016 Score=67.79 Aligned_cols=138 Identities=14% Similarity=0.093 Sum_probs=101.5
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHHHhhcc
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLIAFGMS 101 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li~~g~g 101 (427)
+++...+-+.+.++|.....++.+.+|++.||+ .-.+.+....+.-.+ .+.... .++.+.+..-..++++-.+
T Consensus 76 l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~-----~~s~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 76 LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAA-----VHSFPGLIALRFLLGLFES 149 (495)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHH-----HhhhHHHHHHHHHHHHHhc
Confidence 566677888888999999999999999999995 755544444444333 111111 2456778888999999999
Q ss_pred cccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhcee-------c--cchhHhHHHHHHHHHHHHH
Q 037418 102 GHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYI-------K--PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 102 ~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l-------~--g~~~~F~i~~v~~~i~~ii 172 (427)
..-|+....++.-|++++ +..|-.++ |.+.++|..+|.+++..+ . ||++.|.+.++.+++..++
T Consensus 150 ~~wP~~~~~lg~wy~~~e------~g~r~~~~-~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSE------RGLRMGIW-YASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIV 222 (495)
T ss_pred ccchHHHHHHHhhcChhh------hhhhHHHH-HHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHhe
Confidence 999999999999997654 23345555 677888888887777663 2 9999999998877665544
Q ss_pred H
Q 037418 173 F 173 (427)
Q Consensus 173 f 173 (427)
.
T Consensus 223 ~ 223 (495)
T KOG2533|consen 223 V 223 (495)
T ss_pred E
Confidence 3
No 182
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.58 E-value=0.0011 Score=65.25 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=117.1
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALG 94 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 94 (427)
+..=+++++|+|.++|+.+.+.=....-++.+++.+++-| +|..|++.++.++..+....-. ..+.+.++.+..
T Consensus 34 LL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~-----~~~~~~L~~gt~ 107 (395)
T COG2807 34 LLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRS-----LGGLPLLFLGTL 107 (395)
T ss_pred hHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHh-----cccHHHHHHHHH
Confidence 4455677899999999999988777777888899999988 5999999999888776332111 124678889999
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHH
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVAT 170 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~ 170 (427)
+++.|.+....-+++++-+-|+++-+. ....|+ .+.++|+.+++.+++.+. ||+.+.+.=++.-++++
T Consensus 108 l~G~gIav~nVLLPslIK~~Fpk~~~~-------mtglYs-~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl 179 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFPKRVGL-------MTGLYS-TSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL 179 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcccchhh-------HHhHHH-HHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH
Confidence 999999999999999998888765432 345554 688999999998888876 79998887777777788
Q ss_pred HHHHhc
Q 037418 171 LVFLSG 176 (427)
Q Consensus 171 iif~~~ 176 (427)
++.+..
T Consensus 180 ~~WlPq 185 (395)
T COG2807 180 LIWLPQ 185 (395)
T ss_pred HHHhhh
Confidence 777765
No 183
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.57 E-value=0.00062 Score=71.11 Aligned_cols=155 Identities=14% Similarity=0.009 Sum_probs=80.3
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHH------------HHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAA------------IVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV 72 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~------------~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~ 72 (427)
-+.|||+. .+..++ +.+|++..+++. ..........+..+++|+++||+ |||++++++..++.+.
T Consensus 301 ~~~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~~~ 378 (502)
T TIGR00887 301 DIAFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFILTVL 378 (502)
T ss_pred HHHHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHHHHH
Confidence 35677766 444444 457876543321 11112223334667889999995 9999998887666552
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc
Q 037418 73 SYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP 150 (427)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~ 150 (427)
...+............+.........+..+.-+....+.+|.++++. |..... +...++|+++++.+.+
T Consensus 379 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~---------R~~~~g~~~~~~~~~~~~~~~~~~ 449 (502)
T TIGR00887 379 FFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY---------RSTAHGISAASGKAGAIIGQFGFL 449 (502)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH---------HHHHHHHHHHHhhhHHHHHHHHhh
Confidence 11110000000011111111111222222333455566678876543 344444 6778899999988887
Q ss_pred eec---c----------chhHhHHHHHHHHHHHH
Q 037418 151 YIK---P----------WKIRFGIPAIFTVVATL 171 (427)
Q Consensus 151 ~l~---g----------~~~~F~i~~v~~~i~~i 171 (427)
++. + +...|.+-++..+++.+
T Consensus 450 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 450 YLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred hhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 664 1 23455655555555543
No 184
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.50 E-value=0.0025 Score=64.00 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=46.1
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA 71 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~ 71 (427)
.|+++.+|++..+++.+.........+..++.|++.||+ |||+.+.++..+..+
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 281 (392)
T PRK10473 228 VLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLA 281 (392)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 466678899999999888888888888899999999995 999999888876665
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.49 E-value=0.00093 Score=67.67 Aligned_cols=145 Identities=12% Similarity=0.027 Sum_probs=86.1
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
.+-.|+++..+ ++.+++.+...............+.+.|+..+.++.+..+..+..+....+.. ..+.+...+..
T Consensus 230 ~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~ 304 (400)
T PRK11646 230 MLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM----VSNLQQLFTLI 304 (400)
T ss_pred hhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHH
Confidence 34566665545 66777776666555444333334555665567677777776665552211110 12334455566
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--c-----chhHhHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--P-----WKIRFGIPAI 164 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g-----~~~~F~i~~v 164 (427)
.+.++|.+...|...++..|..++++ +.+.+. ..+.++|..+|+.+.+++. + ....|.+..+
T Consensus 305 ~l~~~g~~~~~p~~~~~~~~~~p~~~---------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~ 375 (400)
T PRK11646 305 CLFYIGSIIAEPARETLSASLADARA---------RGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGI 375 (400)
T ss_pred HHHHHHHHHHHccHHHHHHhcCCccc---------chhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHH
Confidence 67888888999999999998876543 223333 5677889999988888875 1 2344544444
Q ss_pred HHHHHHHH
Q 037418 165 FTVVATLV 172 (427)
Q Consensus 165 ~~~i~~ii 172 (427)
..+++.++
T Consensus 376 ~~~~~~~~ 383 (400)
T PRK11646 376 IGLITLLA 383 (400)
T ss_pred HHHHHHHH
Confidence 44444433
No 186
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.48 E-value=0.00059 Score=70.79 Aligned_cols=152 Identities=13% Similarity=0.059 Sum_probs=90.1
Q ss_pred HhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHH
Q 037418 18 YLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLI 96 (427)
Q Consensus 18 yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li 96 (427)
|.+..++ +....+.+.........++.++.++++||+ |||+++.++..+..+ .+...........+.+.+.+...+.
T Consensus 257 ~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 334 (473)
T PRK10429 257 YFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILL 334 (473)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHH
Confidence 3333334 344444444554455667777889999995 999999888776554 1111000000022345666677788
Q ss_pred HhhcccccccccchhcccCCcchhhhhhhhhhHHH-HHH--HHHHHHHHHHHhhhhceec---cch--------------
Q 037418 97 AFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLF-FFS--FCGVVLVPIIALIAFPYIK---PWK-------------- 156 (427)
Q Consensus 97 ~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~-~f~--Y~~iNiG~~i~~~~~~~l~---g~~-------------- 156 (427)
++|.+...+...++.+|..|.++-+. .++++. .|+ -+...+|..+|+.+.+++- ||.
T Consensus 335 g~~~~~~~~~~~am~ad~id~~e~~t---G~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~~~~~q~~~~~~~i~ 411 (473)
T PRK10429 335 NIGTALFWVLQVIMVADTVDYGEYKL---GIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYVPNVEQSAQTLLGMQ 411 (473)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHhc---CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHH
Confidence 89999999999999999876542211 111232 344 5567788888877766542 442
Q ss_pred hH-hHHHHHHHHHHHHHHH
Q 037418 157 IR-FGIPAIFTVVATLVFL 174 (427)
Q Consensus 157 ~~-F~i~~v~~~i~~iif~ 174 (427)
+. ..+|+++++++.+++.
T Consensus 412 ~~~~~~p~~~~~~~~~~~~ 430 (473)
T PRK10429 412 FIMIGLPTLFFMITLVLYF 430 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 22 2367777777766553
No 187
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.45 E-value=0.0009 Score=76.94 Aligned_cols=151 Identities=7% Similarity=-0.106 Sum_probs=99.7
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhhcC--C--C
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEY--K--P 78 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~--~--~ 78 (427)
+.++++. .+..|+++.+|.+..+++.+.+.+.....+..++.|+++|+. ++++.+..+.++..+ .+... . .
T Consensus 239 ~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (1140)
T PRK06814 239 LVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFASSSVPA 317 (1140)
T ss_pred HHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhccccccc
Confidence 4445555 778899999999999999999999999999999999999885 555544444443332 11110 0 0
Q ss_pred CC---------CCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 037418 79 EC---------IGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAF 149 (427)
Q Consensus 79 ~~---------~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~ 149 (427)
+. ....+.+.+.+++++++++.|...+...+++.+..+++... +.-+.+ ....++|..+++.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G------~v~g~~-~~~~~~~~~ig~~~~ 390 (1140)
T PRK06814 318 EPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRA------RVIAAN-NVLNAAFMVAGTIIL 390 (1140)
T ss_pred ccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccce------eeeHHH-HHHHHHHHHHHHHHH
Confidence 00 00134456677888899999999999999998877664421 122233 466677777777776
Q ss_pred ceec----cchhHhHHHHHH
Q 037418 150 PYIK----PWKIRFGIPAIF 165 (427)
Q Consensus 150 ~~l~----g~~~~F~i~~v~ 165 (427)
+.+. ++...|.+.++.
T Consensus 391 g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 391 ALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHhccCHHHHHHHHHHH
Confidence 6664 555555544443
No 188
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.43 E-value=0.0051 Score=60.22 Aligned_cols=60 Identities=17% Similarity=-0.001 Sum_probs=47.1
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
.+.+.+.+++.+++.|.+...+..++++++.-++++. .+..| ..+..+|++++|++.+.+
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~---------~~~l~~~~~~~~~G~~~gP~i~~~~ 69 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIETA---------ASRLALTQAFNKLGTTVAPLFGGSL 69 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchH---------HHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4678899999999999999999999999998655432 22333 567788888888887743
No 189
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.39 E-value=0.0043 Score=61.42 Aligned_cols=113 Identities=16% Similarity=0.031 Sum_probs=74.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccc
Q 037418 26 SLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLV 105 (427)
Q Consensus 26 ~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~ 105 (427)
+..-|+.+-+.|+..-.++..+-|-++|+| |||.++++|.+...+...... + +.+...+.++..+.++..|-...
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~--~--S~~F~afv~aR~l~Gi~kgnl~v 140 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWA--L--SRNFAAFVLARFLGGIFKGNLSV 140 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHH--H--HHHHHHHHHHHHhhhhccCchHH
Confidence 345577777889999999999999999997 999999999887776322221 0 12333455556666555544322
Q ss_pred cccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 106 SIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 106 ~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
+-+.++|.+.+++ +...++ =.+-.+|..+||.+++++.
T Consensus 141 -~rAiisdV~sek~---------r~l~ms~v~~a~~lGfilGPmIGgyla 180 (451)
T KOG2615|consen 141 -IRAIISDVVSEKY---------RPLGMSLVGTAFGLGFILGPMIGGYLA 180 (451)
T ss_pred -HHHHHHhhcChhh---------ccceeeeeehhhhcchhhcchhhhHHH
Confidence 3478889887643 222333 3455677777777777764
No 190
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.38 E-value=0.00094 Score=66.90 Aligned_cols=159 Identities=12% Similarity=0.094 Sum_probs=114.1
Q ss_pred hhhHHHHHH-hHH----HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhc
Q 037418 2 FWADIFAAY-AMW----VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYE 75 (427)
Q Consensus 2 ~~~eRfs~Y-g~~----~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~ 75 (427)
|+.-||=|- |++ .-..|-.+.+|+++.+-..+...-+....++++++|+|+|| +|-++++.++.+++.+ .+-.
T Consensus 257 FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~ 335 (438)
T COG2270 257 FLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYL 335 (438)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHH
Confidence 444444443 555 35678888999999999999888889999999999999999 5988999999888776 2221
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-HH-HHHHHHHHHhhhhceec
Q 037418 76 YKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-FC-GVVLVPIIALIAFPYIK 153 (427)
Q Consensus 76 ~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y~-~iNiG~~i~~~~~~~l~ 153 (427)
+. .....-+++.=.++++..|...+..=++.++..++++. .++|. |- .--.+++.||.+.+.+-
T Consensus 336 ~~-----~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~---------~~fFglyaltgra~S~~gp~lv~v~t 401 (438)
T COG2270 336 IF-----LEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKE---------GRFFGLYALTGRAASFLGPFLVAVIT 401 (438)
T ss_pred HH-----ccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccc---------cceeehhhhhhhHHHHHHHHHHHHHH
Confidence 11 11223344444678999999999999999999887654 33555 33 44556666776666553
Q ss_pred ----cchhHhHHHHHHHHHHHHHHHh
Q 037418 154 ----PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 154 ----g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+-++++..-.+.+.+++++++.
T Consensus 402 ~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 402 QITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred HHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 6778888777777777776653
No 191
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.0011 Score=69.27 Aligned_cols=154 Identities=8% Similarity=-0.012 Sum_probs=113.4
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHH-HHHHHHHHHH---hhhcCCCCCC
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWM-LLVSSLAYSA---VSYEYKPECI 81 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~-i~~g~~~~~~---~~~~~~~~~~ 81 (427)
++|+-.. .|..|.. ..|+++.+++.++........+.-++.|++||+..=+++. ..++.+...+ .+|..
T Consensus 312 ~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~----- 385 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA----- 385 (509)
T ss_pred HHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh-----
Confidence 4455455 5666665 6899999999999999999999999999999997422333 3333333333 23322
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cc
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PW 155 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~ 155 (427)
.+.+.+..--++.++..|.+-.+.+....|..+.++ ....|. .....+++++|+-+++++. +|
T Consensus 386 --~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~---------l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 386 --TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK---------LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY 454 (509)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh---------cchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence 345666677778888888888888877788776543 445555 7888899999998888886 59
Q ss_pred hhHhHHHHHHHHHHHHHHHhcc
Q 037418 156 KIRFGIPAIFTVVATLVFLSGT 177 (427)
Q Consensus 156 ~~~F~i~~v~~~i~~iif~~~~ 177 (427)
...|..+++.++++....+..+
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999987766543
No 192
>PRK11043 putative transporter; Provisional
Probab=97.37 E-value=0.0063 Score=61.24 Aligned_cols=100 Identities=6% Similarity=-0.123 Sum_probs=66.1
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhhcCCCCCCCCchhHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEYKPECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~ 90 (427)
.+..|++ +.|++..+++...........+..++++++.||+ |+++++..+.....+ .+..... . ...+.+...
T Consensus 225 ~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 300 (401)
T PRK11043 225 GSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL-L-SHPSLVPLL 300 (401)
T ss_pred HhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHH
Confidence 3445554 5799999998877777667777888889999995 988876655444433 1111100 0 012334455
Q ss_pred HHHHHHHhhcccccccccchhcccCCc
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTD 117 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~ 117 (427)
.+..+.+++.|...|...+...|+.++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (401)
T PRK11043 301 IPFCVMAAANGAIYPIVVAQALRPFPQ 327 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcc
Confidence 667788899999999888887777653
No 193
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.33 E-value=0.0019 Score=66.28 Aligned_cols=150 Identities=15% Similarity=0.126 Sum_probs=102.7
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc--cc--hHHHHHHHHHHHHH---hhhcCCCCCCCCchh
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI--IG--NYWMLLVSSLAYSA---VSYEYKPECIGEGQK 86 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~--lG--r~~~i~~g~~~~~~---~~~~~~~~~~~~~~~ 86 (427)
....|+.+++|++.++.+.+.+....--.+=|+. |.++|.+ .| ||.=+++|.++..+ .+..+ +.. ..+.
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~-g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-~~~--~~s~ 86 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLY-GLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-PAS--ESSA 86 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhH-HhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-ccc--cchh
Confidence 4667888999999999888666655555555555 9999997 34 45556667766644 12212 110 1234
Q ss_pred HHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhHhHHHH
Q 037418 87 ILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIRFGIPA 163 (427)
Q Consensus 87 ~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~ 163 (427)
....+.+.+..+|.........++..|.-+.++ ++ +.+.++.. |.+.++|.+++..+.+.+. +++..|.+++
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p-~~---~g~lqS~~-~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~ 161 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREP-ES---RGDLQSFV-WGVRSVGSLVGSLLSGPLLDSFGPQGVFLISA 161 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC-ch---hHHHHHHH-HHHHHHHHHHHHHhhhhhhhcCCCeEEehHHH
Confidence 455567788899999999999999988765433 22 33345454 7899999999988887775 8888898887
Q ss_pred HHHHHHHHH
Q 037418 164 IFTVVATLV 172 (427)
Q Consensus 164 v~~~i~~ii 172 (427)
+...+.++.
T Consensus 162 ~~~~l~~~~ 170 (433)
T PF03092_consen 162 ALPLLMLIV 170 (433)
T ss_pred HHHHHHHHH
Confidence 766665543
No 194
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.0016 Score=68.24 Aligned_cols=150 Identities=11% Similarity=0.114 Sum_probs=103.6
Q ss_pred HHHHhHH----HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCC
Q 037418 7 FAAYAMW----VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIG 82 (427)
Q Consensus 7 fs~Yg~~----~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~ 82 (427)
...||+. ++.-.+.+.++.+..+++.+.++..+..++..++.+.+.||+ |.|.+++.|++++.+.+.... .
T Consensus 56 ~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lss-F--- 130 (509)
T KOG2504|consen 56 LSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSS-F--- 130 (509)
T ss_pred HhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHH-H---
Confidence 5667775 566777788999999999999999999999999999999996 999999999999998332211 0
Q ss_pred CchhHHHHHHHH-HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cchhH
Q 037418 83 EGQKILFYTALG-LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PWKIR 158 (427)
Q Consensus 83 ~~~~~~~~~~l~-li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~~~~ 158 (427)
..+.+.+++... +.++|.|+........++.-|++ ||.+..++.-.+.-+|.++=+.+.-++- ||+.+
T Consensus 131 ~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k--------kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~ 202 (509)
T KOG2504|consen 131 ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK--------KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGA 202 (509)
T ss_pred HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH--------HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHH
Confidence 234666666544 57899999888888888865543 2234445432233333333222222222 99999
Q ss_pred hHHHHHHHHHH
Q 037418 159 FGIPAIFTVVA 169 (427)
Q Consensus 159 F~i~~v~~~i~ 169 (427)
+.+=+..++-.
T Consensus 203 ~l~~~~~~l~~ 213 (509)
T KOG2504|consen 203 LLIFGGISLNV 213 (509)
T ss_pred HHHHHHHHHHH
Confidence 87655555333
No 195
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.29 E-value=1.2e-05 Score=82.30 Aligned_cols=131 Identities=18% Similarity=0.212 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh-hh-cCCCCCCCCchhHHHHHHHHHHHhhcccccc
Q 037418 28 VRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV-SY-EYKPECIGEGQKILFYTALGLIAFGMSGHLV 105 (427)
Q Consensus 28 ~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~ 105 (427)
.+.+...+.......++.+++|+++||+ |||+++.++.+++.+. +. ...+ . ..+.+.+.++..+.++|.|+.-+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~-~--~~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAP-S--YNNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccc-c--ccccccccccccccccccccccc
Confidence 3456677777778888899999999995 9999999999888772 22 2211 0 12567888999999999999999
Q ss_pred cccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec------cchhHhHHHHHHHHHH
Q 037418 106 SIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK------PWKIRFGIPAIFTVVA 169 (427)
Q Consensus 106 ~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~------g~~~~F~i~~v~~~i~ 169 (427)
....++.|.-+++. |......+ ..+.++|.+++......+. +|+..+.++++..++.
T Consensus 122 ~~~~~~~E~~~~~~------R~~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 122 VSPIYISEIAPPKH------RGFLSSLF-QLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV 184 (451)
T ss_pred cccccccccccccc------cccccccc-ccccccccccccccccccccccccccccccccccccccccc
Confidence 99999998764432 11112222 4566778777765544332 4888887776665433
No 196
>TIGR00898 2A0119 cation transport protein.
Probab=97.28 E-value=0.0023 Score=66.58 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=74.6
Q ss_pred HHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 39 GTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 39 ~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
.......+++++++||+ |||+.+.++.++..+.+.. ..+ ....+.......+...+.+..-+....+.+|.++
T Consensus 366 ~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 366 LVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVP----VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcC----CCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 34456778899999994 9999999988776662211 111 1111233333444455566666777888889886
Q ss_pred cchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--cchhHhHHHHHHHHHHHHH
Q 037418 117 DSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 117 ~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--g~~~~F~i~~v~~~i~~ii 172 (427)
++. |..... .....+|+++++.+.+ +. ++...|.+.++..+++.++
T Consensus 441 ~~~---------r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 441 TVV---------RNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHH---------HhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHH
Confidence 542 333444 6777899999998888 44 5566666555555444433
No 197
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.25 E-value=0.0039 Score=65.50 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=103.3
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
++-+|..+.+|.+...-+.+.+++.....+..++.+.+.++ +++.+.+..+.+.+.+.+..+. ...+.+...+++
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~la----l~~~~~~~~~~l 314 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLA----LSPSFWLALIAL 314 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHh----cchHHHHHHHHH
Confidence 56677778899999999999999999888899988898887 5888888888877766332221 023455666677
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH-H-HHHHHHHHHHhhhhceec---cchhHhHHHHHHHHH
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS-F-CGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVV 168 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~-Y-~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i 168 (427)
.+.+.+........++..-... |++ .+.+.++ | ...+.|..+|..+.|.+. |-+.++.++++++++
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~----P~~-----~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll 385 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSV----PDW-----VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLL 385 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----CHH-----HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 7777777766666555543322 222 1456666 4 455555667777777776 778888888888877
Q ss_pred HHHHHHh
Q 037418 169 ATLVFLS 175 (427)
Q Consensus 169 ~~iif~~ 175 (427)
+.++...
T Consensus 386 ~~~~~~~ 392 (524)
T PF05977_consen 386 SALIALR 392 (524)
T ss_pred HHHHHHH
Confidence 7776654
No 198
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.20 E-value=0.0023 Score=63.18 Aligned_cols=106 Identities=12% Similarity=0.001 Sum_probs=75.2
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCc
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEG 84 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~ 84 (427)
.++++. .+..|+++.+|+++.+++.+...+.....+..+++|+++||+ ||||.+..+...... .+...... ...
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 316 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGAFLVVLGLV--SPL 316 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHHHHHHhcCC--Ccc
Confidence 455666 678899999999999999888888888889999999999995 998877766555444 11111100 011
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
+.+.....+.+..++.|...+...++.++..+
T Consensus 317 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (366)
T TIGR00886 317 SLAVFIVLFVALFFFSGAGNGSTFALVPHIFR 348 (366)
T ss_pred hHHHHHHHHHHHHHHhccccchhhhcchhhch
Confidence 44555566666777777777777777777654
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.19 E-value=0.0026 Score=64.76 Aligned_cols=141 Identities=13% Similarity=0.019 Sum_probs=95.0
Q ss_pred HHHHHhhHh-cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHH
Q 037418 14 VMITYLTNV-WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 14 ~l~~yl~~~-l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.+..|+.+. .+.+...++.....+.+...+.-++||+++||. +++|.+.++.....+....... ..+. .....
T Consensus 254 ~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~~~----~~~~-~~~~~ 327 (410)
T TIGR00885 254 FIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGSIF----AGGH-VGLYC 327 (410)
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH----cCCh-HHHHH
Confidence 356666532 355666677777777777889999999999995 9999888887776662211110 0111 23466
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---------cchhHhHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---------PWKIRFGIPA 163 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---------g~~~~F~i~~ 163 (427)
+.++++..+.+-|.+.+...+..+++.. +-.... -+++ +|..+.|.+.+++. |++.+|.++.
T Consensus 328 l~~~glf~s~~fp~i~sl~~~~~g~~~~-------~~s~~l-~~~~-~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~ 398 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYGIALKGLGQDTK-------YGAAGL-VMAI-IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPL 398 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhh-------hhHHHH-HHHH-hccchHHHHHHHHHHHhcccccCccchHHHHHH
Confidence 7778888888889999999998865431 112333 3444 88888888877765 2778898888
Q ss_pred HHHHHH
Q 037418 164 IFTVVA 169 (427)
Q Consensus 164 v~~~i~ 169 (427)
++.+..
T Consensus 399 ~~~~~~ 404 (410)
T TIGR00885 399 LCFAVI 404 (410)
T ss_pred HHHHHH
Confidence 876543
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.13 E-value=0.0084 Score=59.10 Aligned_cols=162 Identities=13% Similarity=0.077 Sum_probs=102.2
Q ss_pred HHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCC
Q 037418 5 DIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGE 83 (427)
Q Consensus 5 eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~ 83 (427)
+.+.||-+- =|--++. +-|+|.++|+.+++..+.....+.+.+=++++|.-.+|+..+..+..+.+...++. . .+
T Consensus 220 qS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~--~-~P 295 (395)
T COG2807 220 QSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLL--L-AP 295 (395)
T ss_pred hHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH--H-hh
Confidence 456677666 4444444 46999999999999999999999999999999987777777777777666333221 0 01
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHH---HHHhhhhceec----cch
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVP---IIALIAFPYIK----PWK 156 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~---~i~~~~~~~l~----g~~ 156 (427)
.+.+ +....++++|.|+.-|-...++.+..++ +++ ..+++ .+. ..+|. .+||.+.+++. ||+
T Consensus 296 ~~~~--~lw~~llG~G~G~~F~laL~li~~rs~~--a~~---Aa~LS-gma---Qg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 296 GQLP--ILWALLLGLGQGGAFPLALTLILLRSSD--AAI---AAALS-GMA---QGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred hhHH--HHHHHHHhCccchHHHHHHHHHHhhcCC--hHH---HHHHH-HHh---hhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 2222 2236899999999999999999887543 443 22233 332 33332 23566677775 787
Q ss_pred hHhHH-HHHHHHHHHHHHHhccccee
Q 037418 157 IRFGI-PAIFTVVATLVFLSGTCSYR 181 (427)
Q Consensus 157 ~~F~i-~~v~~~i~~iif~~~~~~~~ 181 (427)
..... ..+.......-+..+|++|.
T Consensus 365 ~~~~~l~~~~i~m~i~Gl~a~r~~~i 390 (395)
T COG2807 365 APLVLLALATLLMLIFGLRAGRNRYI 390 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcchhHHh
Confidence 65432 22222222233455555443
No 201
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.13 E-value=0.0023 Score=49.01 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=46.6
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAY 69 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~ 69 (427)
-+..|++ +.|++..+.+.+.++-.....+.+++-|+++||. ||+|.++.+..++
T Consensus 22 fl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 22 FLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred hhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 3566665 4899999999999999999999999999999996 8888888776654
No 202
>PRK11462 putative transporter; Provisional
Probab=97.10 E-value=0.0078 Score=62.28 Aligned_cols=129 Identities=11% Similarity=-0.022 Sum_probs=72.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hh-hcCCCCCCCCchhHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VS-YEYKPECIGEGQKILFYT 91 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~ 91 (427)
....|.+..+|.++ ..+.+...+.....+..+++++++||+ |||+++..+..+..+ .+ ..+.+ ..+...+++
T Consensus 250 ~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 323 (460)
T PRK11462 250 AMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFVP----MQASITMFV 323 (460)
T ss_pred HhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhc----hhHHHHHHH
Confidence 45555555555433 234455666666777888999999985 888887655443322 11 11111 122233444
Q ss_pred HHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHH-HH--HHHHHHHHHHHhhhhce
Q 037418 92 ALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFF-FS--FCGVVLVPIIALIAFPY 151 (427)
Q Consensus 92 ~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~-f~--Y~~iNiG~~i~~~~~~~ 151 (427)
...+.+++.+...+...++.+|..|.++-+. .++++.. |+ -++.++|..+|+.++++
T Consensus 324 ~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~t---G~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 324 FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCN---GKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhc---CCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677777777777888888766432211 1223333 33 35566666666555443
No 203
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.03 E-value=0.0022 Score=67.90 Aligned_cols=260 Identities=15% Similarity=0.065 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH---hhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccc
Q 037418 33 IVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGG 109 (427)
Q Consensus 33 ~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~ 109 (427)
....+....+-.+..+.-.+ +.-|..+++..-...-.+ ....+ .+....|+...+..-+ +..++|+++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~-~~~g~~~s~~~il~~e~~e~~a~~g~-------~~nlv~ylt~~~~~~~-~~aa~~v~~ 81 (571)
T KOG1237|consen 11 IYHDFTSVDYRGPLLGSSIA-FKTGGWLSAPFILGNEVLERLAFFGL-------VSNLVTYLTLELHASG-GGAANNVNA 81 (571)
T ss_pred hccccceeeccCCccccccc-ceechhHhHHHHHHHHHHHHHhHhcc-------hhHHHHHHHHHhccch-HHHHHHHHH
Confidence 33444445555555554444 344666655433322222 22222 2334566666666666 999999999
Q ss_pred hhcccCCcchhhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhceeccchhHhHHHHHHHHHHHHHHHhcccceeecC-CCC
Q 037418 110 FMADQMTDSRAEQVSMRSAKLFFFS-FCGVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVATLVFLSGTCSYRRRK-PLG 187 (427)
Q Consensus 110 ~~~dq~~~~~~~~~~~~~~~~~~f~-Y~~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~-p~g 187 (427)
+.|+++....-. +-.-|+++. |+.+|+++++..+. .|+++...++.++..+-+ .+.... ..+
T Consensus 82 f~G~~~~~~l~g----~~laD~f~gry~tI~~~s~i~~~G---------~~~lt~~a~~~~l~p~~~---~~~~~~~~c~ 145 (571)
T KOG1237|consen 82 FGGTQFLLPLLG----AFLADSFLGRYFTINIGSLISLLG---------LFGLTLSAMIPALLPFMC---KFKPGGNVCE 145 (571)
T ss_pred HhhHHHHHHHHH----HHHHHHHhHHHHHHHHHHHHHHHH---------HHHHHHHHHhhhcCCccc---cCCCCCCccc
Confidence 999998762211 111345555 99999999986433 566666666665544433 111111 122
Q ss_pred ChhHHHHHHHHHHHhhccCCCCCCCccccccCCcccccccccCCCcchhhhhhccCCCccchhccCCcccccchhhHHHH
Q 037418 188 SPLTTVFRVFVASALKLFYRIPRNASELYERDNVDEIYVVQHTRSLRCLDKAAIILPDKTLEQQEGNRWRLCRVTEIEET 267 (427)
Q Consensus 188 ~pl~~~~~v~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~~~~~~~~~~~~~ve~~ 267 (427)
+|-+....++..++........ .. ...+.+.++...+. .+.+++
T Consensus 146 ~~s~~q~~~~~~~l~lia~G~g---------------g~-----r~~~~~fGadQfd~----------------~~~~~~ 189 (571)
T KOG1237|consen 146 SPSKLQLAVLYGALYLIALGAG---------------GI-----RPCLLAFGADQFDE----------------LDPVEV 189 (571)
T ss_pred CcchHHHHHHHHHHHHheeccC---------------CC-----CCcchhhcccccCc----------------cCcchh
Confidence 3333333444444443211000 00 01122222222210 111122
Q ss_pred HhhccchhhhhhhHhhHhhhcccchhHHHHHHHhcC-CCCCceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCC
Q 037418 268 KGLLRMIPICLTFIIPGVVSSIGFTYFLEQADHLNR-KVGKLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYA 346 (427)
Q Consensus 268 k~~~~~l~l~~~~~~f~~~~~Q~~s~~~~qa~~~d~-~~~~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s 346 (427)
+. ....+.|..+.|..+.+..|+..++. +..+|.+-++..+..|.+.++++.|......++..+
T Consensus 190 ~~--------~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~------- 254 (571)
T KOG1237|consen 190 KG--------IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPR------- 254 (571)
T ss_pred hC--------cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCC-------
Confidence 21 24567888889999999988877775 567888888889999999999999988776654321
Q ss_pred chhhHHHHHHHHHHHHHHHHHH
Q 037418 347 PAIGFATSMVLAILCCITAAKV 368 (427)
Q Consensus 347 ~~~ki~iG~~l~~ls~l~~~~~ 368 (427)
--.+..+|-++.++++-.....
T Consensus 255 gsp~t~i~~Vlvaa~~k~~~~~ 276 (571)
T KOG1237|consen 255 GSPKTRIGQVLVAAAFKRKAVV 276 (571)
T ss_pred CCchhHHHHHHHHHHHHHhccC
Confidence 2267778888888888765433
No 204
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.03 E-value=0.019 Score=57.65 Aligned_cols=125 Identities=7% Similarity=-0.107 Sum_probs=75.6
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHH-HHHHH--hhhcCCCCCCCCchhHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSS-LAYSA--VSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~-~~~~~--~~~~~~~~~~~~~~~~~~~~~ 92 (427)
..|+++.+|++..+++.+.........+..++++++.||+ |+........ ....+ ..+... ...+.+.+..+
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 305 (394)
T PRK11652 231 GVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQSVICCLLAGLLMWIPGWF----GVMNVWTLLVP 305 (394)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh----ccccHHHHHHH
Confidence 3467777999999888776665555556666667777764 4322221111 11111 111111 01234456667
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~ 153 (427)
..+.++|.|..-|...+...|..+++.. .....+ ....|+|..+++.+.+++.
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g-------~~~~~~-~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 306 AALFFFGAGMLFPLATSGAMEPFPYLAG-------TAGALL-GGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccch-------HHHHHH-HHHHHHHHHHHHHHHHHcc
Confidence 7888999999999999988887653221 122233 4566899999998888776
No 205
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.00 E-value=0.0094 Score=59.74 Aligned_cols=154 Identities=15% Similarity=0.161 Sum_probs=108.7
Q ss_pred HHHHHhhH---------hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCc
Q 037418 14 VMITYLTN---------VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEG 84 (427)
Q Consensus 14 ~l~~yl~~---------~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~ 84 (427)
.+.+++++ .+|++..+.+.+...+.+-..+.=.+.|++..|..|++|+..+|+....+.+..+.. .....
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~-a~~~~ 299 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL-AGPLG 299 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH-HHhcc
Confidence 55666665 589999999999999999999988899999998899999999999888872222110 00123
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec--------
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK-------- 153 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~-------- 153 (427)
+.+.+..++.++++|+|.+.....+...|.-.+++.. ..-.... -.+..+|.++|..+-...+
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG------~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~ 373 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAG------LFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPA 373 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 5678999999999999999988888888876544321 1111221 3344555555543332221
Q ss_pred -cchhHhHHHHHHHHHHHHHHH
Q 037418 154 -PWKIRFGIPAIFTVVATLVFL 174 (427)
Q Consensus 154 -g~~~~F~i~~v~~~i~~iif~ 174 (427)
+|...|.+-++.+++++.+..
T Consensus 374 ~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 374 LAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 688889999999988876653
No 206
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.94 E-value=0.015 Score=60.30 Aligned_cols=159 Identities=18% Similarity=0.205 Sum_probs=94.5
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccc-------hHHHHHHHHHH-HHHhh
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIG-------NYWMLLVSSLA-YSAVS 73 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lG-------r~~~i~~g~~~-~~~~~ 73 (427)
++|-+++|-+. -+=.|+++.||++..+.+.+...=.....+..+++|++||+... +||..-..+.. ..+.+
T Consensus 268 f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l 347 (466)
T KOG2532|consen 268 FGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFL 347 (466)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHH
Confidence 55666777776 66789999999999999998888888888999999999999755 22222111111 11122
Q ss_pred hcCC-CCCCCC-chhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhh
Q 037418 74 YEYK-PECIGE-GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAF 149 (427)
Q Consensus 74 ~~~~-~~~~~~-~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~ 149 (427)
..+. .++... .....+.+++.+.+...+++.-|.. + ..|+. -.-... -...++..+++|.++
T Consensus 348 ~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~-------~-~apq~------a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 348 LVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ-------D-IAPQH------AGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh-------h-ccchH------HHHHHHHHHHHHHHHHHHHHHhe
Confidence 2121 111111 1122222333333333333322211 1 01211 111222 566777888888888
Q ss_pred ceec------cchhHhHHHHHHHHHHHHHHHh
Q 037418 150 PYIK------PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 150 ~~l~------g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+.+- .|+..|.+.++.++++.++|.+
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 8664 7999999999999999988865
No 207
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.016 Score=59.55 Aligned_cols=106 Identities=19% Similarity=0.175 Sum_probs=83.2
Q ss_pred HHHhHH--HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh--hcCCCCCCCC
Q 037418 8 AAYAMW--VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS--YEYKPECIGE 83 (427)
Q Consensus 8 s~Yg~~--~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~--~~~~~~~~~~ 83 (427)
..+.++ .++.|.+..+|.++..+.............+.++--.+.++ +||+++..++.++..+.. ..+.+ .
T Consensus 250 ~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~----~ 324 (467)
T COG2211 250 IAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTP----A 324 (467)
T ss_pred HHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhc----C
Confidence 344455 57788888899999999888888888777878888999998 599999999988888721 11221 3
Q ss_pred chhHHHHHHHHHHHhhcccccccccchhcccCCcc
Q 037418 84 GQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDS 118 (427)
Q Consensus 84 ~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~ 118 (427)
.+.++.++...+..+|.+...+-.-++++|.-|.+
T Consensus 325 ~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyg 359 (467)
T COG2211 325 GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYG 359 (467)
T ss_pred cchHHHHHHHHHHHHHhhccccccHHHhcchhhHH
Confidence 45677888889999999999999999999976543
No 208
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=96.70 E-value=0.019 Score=56.79 Aligned_cols=136 Identities=12% Similarity=0.094 Sum_probs=78.4
Q ss_pred hhhHHHHHHhHHHHHHHhhHh---cCC---------------chHHHHHHHH--HHHHHHHHhhhHHHHhhhcccchHHH
Q 037418 2 FWADIFAAYAMWVMITYLTNV---WKI---------------SLVRAAAIVN--FFWGTVLMLPLAIQYLVDTIIGNYWM 61 (427)
Q Consensus 2 ~~~eRfs~Yg~~~l~~yl~~~---l~~---------------~~~~A~~~~~--~~~~~~y~~~~~GG~laD~~lGr~~~ 61 (427)
||.-+|+|||+-+++.=+-+. .+. ....+..... .-+..-+-.-++.|++-|| +|||+|
T Consensus 335 wfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iver-lGRKkT 413 (528)
T KOG0253|consen 335 WFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVER-LGRKKT 413 (528)
T ss_pred HHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHH-hcchhH
Confidence 688999999998433333221 111 1111222222 2333446677899999999 799999
Q ss_pred HHHHHHHHHH-hhhcCCCCCCCCc-hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHH
Q 037418 62 LLVSSLAYSA-VSYEYKPECIGEG-QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCG 137 (427)
Q Consensus 62 i~~g~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~ 137 (427)
+....+++.+ .+++.. |.+.. ...+++.+.+++..+.+ +.+.+.-+.|+..- |..+-. --.
T Consensus 414 Mal~l~~f~iflfll~~--c~~rn~~tvllf~arafisg~fq----vaYvYtPEVyPTav---------RatgvGtcSsm 478 (528)
T KOG0253|consen 414 MALSLILFGIFLFLLTT--CKTRNAYTVLLFTARAFISGAFQ----VAYVYTPEVYPTAV---------RATGVGTCSSM 478 (528)
T ss_pred HHHHHHHHHHHHHHHHH--hcCcchhHHHHHHHHHHHhchhe----EEEEecCcccchhh---------hhcchhhhhhH
Confidence 9999988887 333332 32221 22344556666655544 45566666666532 333333 344
Q ss_pred HHHHHHHHhhhhceec
Q 037418 138 VVLVPIIALIAFPYIK 153 (427)
Q Consensus 138 iNiG~~i~~~~~~~l~ 153 (427)
.-||+.++|.++-..+
T Consensus 479 aRIggI~~p~iA~~~e 494 (528)
T KOG0253|consen 479 ARIGGIFSPVIAMRAE 494 (528)
T ss_pred HhhhhhhhhHHHHHhc
Confidence 5678888887773333
No 209
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.49 E-value=0.04 Score=56.00 Aligned_cols=154 Identities=14% Similarity=0.118 Sum_probs=100.1
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFYTA 92 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 92 (427)
...|+++.-|.+...++.+.+.-...=..+=.+.+.+--|+ |-++.+.++...+.+ .+....++ +.....+...++
T Consensus 230 ~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a~~~~-~~~~~~~~~~l~ 307 (400)
T PF03825_consen 230 FSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYAYFSD-PWPFIVALQLLG 307 (400)
T ss_pred HHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHH
Confidence 45677654447777776655544444444555678888885 999999999999888 22222100 000011223344
Q ss_pred HHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---------cchhHhHHHH
Q 037418 93 LGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---------PWKIRFGIPA 163 (427)
Q Consensus 93 l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---------g~~~~F~i~~ 163 (427)
..+-++..|.+-.....++.+..+++. |.+-+..|+=...-+|..+|..++|++- .|...|.+++
T Consensus 308 q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a 381 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFA 381 (400)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHH
Confidence 567899999999999999999887654 2334566543345688888888888875 3455677777
Q ss_pred HHHHHHHHHHHhc
Q 037418 164 IFTVVATLVFLSG 176 (427)
Q Consensus 164 v~~~i~~iif~~~ 176 (427)
+..++..++|...
T Consensus 382 ~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 382 VMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHhh
Confidence 7777777777654
No 210
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.37 E-value=0.001 Score=62.66 Aligned_cols=153 Identities=18% Similarity=0.160 Sum_probs=95.2
Q ss_pred HHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHH
Q 037418 16 ITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGL 95 (427)
Q Consensus 16 ~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 95 (427)
+.|+.+..|+...|.+.++-.--+...++..+.|-++|+ .||+|+-+.-++.|.+....=. +.++..+.+|.++
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsCiTKh-----SpqYkVLmVGR~L 133 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSCITKH-----SPQYKVLMVGRVL 133 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHHHhhc-----CCceEEEeehhhh
Confidence 456667789999998888766666677778888999998 5999999988888887433221 2344556677777
Q ss_pred HHhhcccccccccch-hcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHH----Hhhhhceec-cchhHhHHHHHHH
Q 037418 96 IAFGMSGHLVSIGGF-MADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPII----ALIAFPYIK-PWKIRFGIPAIFT 166 (427)
Q Consensus 96 i~~g~g~~k~~~~~~-~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i----~~~~~~~l~-g~~~~F~i~~v~~ 166 (427)
=++.+.+.-...-+. +++--++++-++ .-+..-|+ ++++.+-+.+ |..++.++. |--+-|-.+++..
T Consensus 134 GGiaTsLLFSaFEsWliaEHnekr~Feq----qWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL 209 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNEKRGFEQ----QWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL 209 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccCChH----hhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH
Confidence 777777654444332 333221221111 11122233 3334333333 445555555 7778898888888
Q ss_pred HHHHHHHHhccc
Q 037418 167 VVATLVFLSGTC 178 (427)
Q Consensus 167 ~i~~iif~~~~~ 178 (427)
.++..+.+..+.
T Consensus 210 aigmAvil~~W~ 221 (454)
T KOG4332|consen 210 AIGMAVILSSWS 221 (454)
T ss_pred HHHHHHHHhhhh
Confidence 888777765544
No 211
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.039 Score=56.12 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=87.3
Q ss_pred CchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-h-hhcCCCCCCCC--chhHHHHHHHHHHHhhc
Q 037418 25 ISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-V-SYEYKPECIGE--GQKILFYTALGLIAFGM 100 (427)
Q Consensus 25 ~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~-~~~~~~~~~~~--~~~~~~~~~l~li~~g~ 100 (427)
++....+.+.++-..-..+.+++-||++|++ |||+..-...+++++ . +..+ +.+..+ .-.+.+..-..++++|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~-s~~~~~~~~~m~~L~~~R~~LGiGI 158 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGL-SVGTTSPLGVMMTLCFFRFLLGIGI 158 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhcc-CCCCCCCcchhhHHHHHHHHhhccc
Confidence 6777788877777778889999999999995 999999888888877 2 2222 212111 23556667788999999
Q ss_pred ccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec--------------cchhHhHHHHH
Q 037418 101 SGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--------------PWKIRFGIPAI 164 (427)
Q Consensus 101 g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--------------g~~~~F~i~~v 164 (427)
|+=-|+..+...+.-.+... -......|. =+++-.|+.++.++....+ =|+.-|++.++
T Consensus 159 GGDYPlSAtI~SE~an~~~R-----Ga~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~v 233 (538)
T KOG0252|consen 159 GGDYPLSATIMSESANKKTR-----GAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAV 233 (538)
T ss_pred cCCCcchHHHhhhhhhhccc-----cceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHH
Confidence 99999988877775322110 001112232 4556666666655554443 37777876554
Q ss_pred H
Q 037418 165 F 165 (427)
Q Consensus 165 ~ 165 (427)
-
T Consensus 234 p 234 (538)
T KOG0252|consen 234 P 234 (538)
T ss_pred H
Confidence 3
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=96.22 E-value=0.047 Score=56.76 Aligned_cols=157 Identities=8% Similarity=-0.110 Sum_probs=94.0
Q ss_pred HHHHHhhHhcCCchHH----HHHHHHHHHHHHHHhhhH-HH---HhhhcccchHHH--HHHHHHHHHHhh--hcC---CC
Q 037418 14 VMITYLTNVWKISLVR----AAAIVNFFWGTVLMLPLA-IQ---YLVDTIIGNYWM--LLVSSLAYSAVS--YEY---KP 78 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~----A~~~~~~~~~~~y~~~~~-GG---~laD~~lGr~~~--i~~g~~~~~~~~--~~~---~~ 78 (427)
.+.+|..+..+.+... .+.+.+.......++..+ .. .+.||..+.+.. +.+|.++..+.. ..+ ..
T Consensus 294 ~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~ 373 (475)
T TIGR00924 294 SLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFA 373 (475)
T ss_pred HHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4666666654443222 455555555555544333 32 455542232332 356776665511 111 00
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK--- 153 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~--- 153 (427)
......+.+.+.+...+.++|..+..|...++..++-+++. +..... +.+..+|..++..+.....
T Consensus 374 ~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~---------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~ 444 (475)
T TIGR00924 374 DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL---------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQ 444 (475)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00013467778889999999999999999999999765432 233333 5677777877766666443
Q ss_pred cchhHhHHHHHHHHHHHHHHHhcccc
Q 037418 154 PWKIRFGIPAIFTVVATLVFLSGTCS 179 (427)
Q Consensus 154 g~~~~F~i~~v~~~i~~iif~~~~~~ 179 (427)
||..-|...++.+++..++++..+|+
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 445 GVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888877777777665443
No 213
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.13 E-value=2.1 Score=44.58 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=38.9
Q ss_pred HHHHHHHHhhhHHHHhhhcccchHHHHHHH-HHHHHHh-hhc-CCCCCCCCchhHHHHHHHHHHHhhcccccccccchhc
Q 037418 36 FFWGTVLMLPLAIQYLVDTIIGNYWMLLVS-SLAYSAV-SYE-YKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMA 112 (427)
Q Consensus 36 ~~~~~~y~~~~~GG~laD~~lGr~~~i~~g-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~ 112 (427)
+-....-+..++-|-+||+. |+||.++.. ..++.+. ... ... +.+.+...+-.++-.++.+.-....+++.-
T Consensus 78 is~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~----~~~~~~~~~l~iia~v~~~~~~vfyna~LP 152 (477)
T PF11700_consen 78 ISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS----PGQWWLALVLFIIANVGYEASNVFYNAYLP 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 33334444445558899986 666655554 4444431 111 111 122222222223334566666667777777
Q ss_pred ccCCcch
Q 037418 113 DQMTDSR 119 (427)
Q Consensus 113 dq~~~~~ 119 (427)
|.-++++
T Consensus 153 ~la~~~~ 159 (477)
T PF11700_consen 153 DLARPEP 159 (477)
T ss_pred hhcCCCh
Confidence 7665543
No 214
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=95.94 E-value=0.15 Score=51.83 Aligned_cols=149 Identities=10% Similarity=-0.002 Sum_probs=75.5
Q ss_pred HHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-----hhhcCCCCCC
Q 037418 8 AAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-----VSYEYKPECI 81 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-----~~~~~~~~~~ 81 (427)
.+++.. .+-.|+++.+|++..+++.......+...+...+.+.+.++..+ +|.+..+..+..+ .+.....
T Consensus 233 ~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~~ig~~l~~~~~~~~--- 308 (413)
T PRK15403 233 PMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE-PRFIWRAVPIQLVGLALLIVGNLLW--- 308 (413)
T ss_pred HHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 334444 44567888889999999887765555555544444544433333 3433222211111 0100000
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec--cchhHh
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK--PWKIRF 159 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~--g~~~~F 159 (427)
....+..+.++.+.++|.|...|++.+..-.|....+.+ ..+.++ .....+..++....+++. +=.+.|
T Consensus 309 -~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~-------a~a~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 379 (413)
T PRK15403 309 -PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGT-------VSASLN-MVILMVMAVSVEIGRWLWFNGGRLPF 379 (413)
T ss_pred -cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcH-------HHHHHH-HHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 122334567888899999999999986443433322221 233443 222333344444445553 334555
Q ss_pred HHHHHHHHHH
Q 037418 160 GIPAIFTVVA 169 (427)
Q Consensus 160 ~i~~v~~~i~ 169 (427)
....+...+.
T Consensus 380 ~~~~~~~~~~ 389 (413)
T PRK15403 380 HLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHH
Confidence 5444443333
No 215
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.92 E-value=0.25 Score=51.18 Aligned_cols=119 Identities=17% Similarity=0.052 Sum_probs=70.8
Q ss_pred HHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcch
Q 037418 40 TVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSR 119 (427)
Q Consensus 40 ~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~ 119 (427)
...+...+-|.++||| ||+..+.+....+.+-.+.+. -..+|.+ + +.-+.-|.+.+-....++++|.-.++
T Consensus 74 ~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~-----~~~~~~~-~-~~~l~g~~~~~~s~~~a~vadis~~~- 144 (463)
T KOG2816|consen 74 LTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLL-----FQGYWFF-L-LLGLSGGFSAIFSVGFAYVADISSEE- 144 (463)
T ss_pred HHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHH-----HHHHHHh-h-hcccccchhhhhhhhhhheeeccchh-
Confidence 4455566669999997 999999998887776221111 0112222 1 11122233334455566677754332
Q ss_pred hhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHHHHHHHHHHHHh
Q 037418 120 AEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 120 ~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+ |...+. .-+.-.|..+++.+++++. |+-..|.++++..+++.+....
T Consensus 145 --~------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~ 197 (463)
T KOG2816|consen 145 --E------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLL 197 (463)
T ss_pred --H------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhh
Confidence 2 333433 4445556677777777765 8888899988888777765444
No 216
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.84 E-value=2.4 Score=42.80 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=76.6
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHH--HHHHHHHHHH-------hhhcCCC---CCCCC
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWM--LLVSSLAYSA-------VSYEYKP---ECIGE 83 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~--i~~g~~~~~~-------~~~~~~~---~~~~~ 83 (427)
+..+|+.+..-.+.++..-.....+=+++ |+.+|++ +|.||+ |..|..++.. .+..+.. .....
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~-G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWF-GHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHh-ccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 45678888888888887777766665555 9999996 233444 4445554443 1111111 00011
Q ss_pred chhH--HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 84 GQKI--LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 84 ~~~~--~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
...+ ...++..++++|.+...+...++.+|.-+|++ |.+.-+ |...-+|..++.++.+.+
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~---------R~~~v~ivw~Mli~G~iv~ai~~g~l 148 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER---------RPRVVAIVWVMLIVGIIVSAIVFGRL 148 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh---------hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 33455667788888888999999999866543 334444 777788888887777644
No 217
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.84 E-value=0.13 Score=53.40 Aligned_cols=125 Identities=16% Similarity=-0.029 Sum_probs=74.7
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCC--CCCCCCchhHHH---HHHH
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYK--PECIGEGQKILF---YTAL 93 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~--~~~~~~~~~~~~---~~~l 93 (427)
+...-|++..+|.......+....++.++|.++-||. |||+.++.+...+.+....+. ....+....|.- ..++
T Consensus 296 i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 296 IFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAI 374 (485)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3345699999999988888889999999999999995 999999999988877111110 000001111221 2333
Q ss_pred HHHHhhccc-ccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 94 GLIAFGMSG-HLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 94 ~li~~g~g~-~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
.+..++.+. .-|-..=+++|.+++++ |....+ +....+..++-....+.++
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~---------R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSA---------RSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccc---------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322222 34555556678887654 344444 4444444444445555565
No 218
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=95.80 E-value=0.075 Score=55.48 Aligned_cols=164 Identities=9% Similarity=-0.049 Sum_probs=93.0
Q ss_pred HHHhHH-HHHHHhhHhcCCchH----HHHHHHHHHHHHHHHhhhHHHHhhhcccchHH-------HHHHHHHHHHHhhh-
Q 037418 8 AAYAMW-VMITYLTNVWKISLV----RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW-------MLLVSSLAYSAVSY- 74 (427)
Q Consensus 8 s~Yg~~-~l~~yl~~~l~~~~~----~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~-------~i~~g~~~~~~~~~- 74 (427)
.|..+. .+.+|..+..+.+.. .++.+.+.......++.++.|.+.||. |+|+ -+.+|.++..+...
T Consensus 284 ~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~~~~ 362 (489)
T PRK10207 284 LYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLGFLT 362 (489)
T ss_pred HHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 344444 677777654333211 233333334344434444557899995 8886 36666666554211
Q ss_pred ------cCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhh
Q 037418 75 ------EYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIA 148 (427)
Q Consensus 75 ------~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~ 148 (427)
...... ...+.+.+.....+.++|.++..|...+++.+.-+++.. ......+ +...++|..+|..+
T Consensus 363 ~~~~~~~~~~~~-~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~------g~~~g~~-~l~~~ig~~lg~~l 434 (489)
T PRK10207 363 AAAAGMWFADAQ-GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM------GFILGMW-FLTQAAAFLLGGYV 434 (489)
T ss_pred HHHHHHhhcCCC-CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH------HHHHHHH-HHHHHHHHHHHHHH
Confidence 111101 123456666788999999999999999999887554321 1122222 67778888888766
Q ss_pred hceec-------------cchhHhHHHHHHHHHHHHHHHhcccce
Q 037418 149 FPYIK-------------PWKIRFGIPAIFTVVATLVFLSGTCSY 180 (427)
Q Consensus 149 ~~~l~-------------g~~~~F~i~~v~~~i~~iif~~~~~~~ 180 (427)
+.+.+ .+...|..-++..++..++++...|++
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 435 ATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred HHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64331 255667765555555555554433433
No 219
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.70 E-value=0.22 Score=46.12 Aligned_cols=131 Identities=14% Similarity=0.145 Sum_probs=82.9
Q ss_pred hcCCch--HHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHh--hhcCCCCCCCCchhHHHHHHHHHHH
Q 037418 22 VWKISL--VRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAV--SYEYKPECIGEGQKILFYTALGLIA 97 (427)
Q Consensus 22 ~l~~~~--~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~li~ 97 (427)
.++.+. ...+.+...+.....+..++.|.++||+ |||+.+..+.....+. +....+ ....+.+.......+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g 105 (338)
T COG0477 31 TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP----NVGLALLLILRLLQG 105 (338)
T ss_pred HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc----cchHHHHHHHHHHHH
Confidence 344444 4677778888888888889999999998 9998888887542221 111211 123455666666688
Q ss_pred hhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HH-HHHHHHHHHhhhhceec-----cchhHhHHHHHH
Q 037418 98 FGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FC-GVVLVPIIALIAFPYIK-----PWKIRFGIPAIF 165 (427)
Q Consensus 98 ~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~-~iNiG~~i~~~~~~~l~-----g~~~~F~i~~v~ 165 (427)
++.|...|...++..|.+++ . ++ +...++ .. ..++|..+++.+.+.+. +|+..|.+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~-~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPE-A-TE------RGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCc-h-hH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 99999999999999998876 2 11 222333 23 35566666654444332 677655544443
No 220
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.65 E-value=0.054 Score=54.24 Aligned_cols=144 Identities=17% Similarity=0.122 Sum_probs=102.1
Q ss_pred HHHHHhHH-----HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh--hcCCC
Q 037418 6 IFAAYAMW-----VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS--YEYKP 78 (427)
Q Consensus 6 Rfs~Yg~~-----~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~--~~~~~ 78 (427)
-|-|-|+. -+..|+.+..|.++.+++..+..+.....+.-++|-++-.| +-..|.+.+.++...+.+ ..++
T Consensus 245 ~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~~l~- 322 (422)
T COG0738 245 IFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAVALI- 322 (422)
T ss_pred HHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHh-
Confidence 37788886 37888888899999999999999999999999999999986 588888887776555421 2222
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec---cc
Q 037418 79 ECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK---PW 155 (427)
Q Consensus 79 ~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~---g~ 155 (427)
.+ ..-..++.++++-++.+-|++.+..-+..+++++ ..+.+ -..--+|.++-|.+-+++. |-
T Consensus 323 -----~g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts--------~~s~~-l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 323 -----GG-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS--------VGSGL-LVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred -----cC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc--------cccee-eeeheecchHHHHHHHHHHHhhhh
Confidence 11 2334578889999999999999999999885543 23333 1233345555566666665 55
Q ss_pred hhHhH-HHHHHH
Q 037418 156 KIRFG-IPAIFT 166 (427)
Q Consensus 156 ~~~F~-i~~v~~ 166 (427)
...|. ++..+.
T Consensus 388 ~~~~~~~pllc~ 399 (422)
T COG0738 388 QLTFLIVPLLCY 399 (422)
T ss_pred HHHHHHHHHHHH
Confidence 55555 444444
No 221
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=95.57 E-value=0.19 Score=50.44 Aligned_cols=150 Identities=11% Similarity=0.018 Sum_probs=80.9
Q ss_pred HHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhccc--chHHHHHH-HHHHHHHhhhcCCCCCC
Q 037418 6 IFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTII--GNYWMLLV-SSLAYSAVSYEYKPECI 81 (427)
Q Consensus 6 Rfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~l--Gr~~~i~~-g~~~~~~~~~~~~~~~~ 81 (427)
-.++|++. -+-.|+++ .|++.. ++........ ...+..++++||.. |+|+.... ...+..+....+..
T Consensus 205 ~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~--- 276 (368)
T TIGR00903 205 VALFDNLAIWLEAALRP-AGLEDI-AGDAVALAIL---AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF--- 276 (368)
T ss_pred HHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHH---HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH---
Confidence 35677777 57788854 678764 3333222222 23344689999862 32333222 22222221111110
Q ss_pred CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec-cchhH
Q 037418 82 GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK-PWKIR 158 (427)
Q Consensus 82 ~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~-g~~~~ 158 (427)
..+.......+.+.+.+.+...+...++.+|.++++. |.+... +...|+|+..++.+.+.+. |.+..
T Consensus 277 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~---------rgt~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~ 346 (368)
T TIGR00903 277 -ELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL---------HGKAAGAIGFTSRAISVALALAAMLFISSAEAY 346 (368)
T ss_pred -ccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh---------cCcccchhhHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 0112222333344445555555667788999987643 233333 7888999988888777665 76677
Q ss_pred hHHHHHHHHHHHHHH
Q 037418 159 FGIPAIFTVVATLVF 173 (427)
Q Consensus 159 F~i~~v~~~i~~iif 173 (427)
|.+-++..+++.+..
T Consensus 347 f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 347 FTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHHH
Confidence 765555555555443
No 222
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.49 E-value=0.088 Score=46.12 Aligned_cols=67 Identities=19% Similarity=0.366 Sum_probs=50.8
Q ss_pred HhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccC
Q 037418 43 MLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQM 115 (427)
Q Consensus 43 ~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~ 115 (427)
++.+++..+-++ +|.|+++++|.+.+.+...... ..+.+.++.+=++.++|.+.+.+....++.+.-
T Consensus 52 ~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~-----~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 52 ISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF-----YPNSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 344455556666 7999999999999998443322 234678888999999999999999999888643
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.40 E-value=0.47 Score=44.96 Aligned_cols=103 Identities=12% Similarity=-0.103 Sum_probs=65.7
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCC-CCCCCCchhHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYK-PECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~-~~~~~~~~~~~~~ 90 (427)
...--+.+.+|++++|.+.+-.+-....++ .++.|.+.|++ |.+-++.+|+....+ ....+. ..-....+.|.+.
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 344556788999999999998888777786 58889999995 999999999998877 111111 0000123445555
Q ss_pred HHHHHHHhhcccccccccchhcccCCcc
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDS 118 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~ 118 (427)
+.+.+.+.|.+.+....-.-..+.|+++
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP~~ 128 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFPRS 128 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCccc
Confidence 4445555555544333333333667653
No 224
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.06 E-value=0.67 Score=47.24 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=46.5
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA 71 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~ 71 (427)
..+|..+.+| +...+....-+|+.......+.|-|+.|++ |-|-+.++++.+..+
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~i 121 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGI 121 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHH
Confidence 5567777777 666666777788888889999999999996 999999999999888
No 225
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.46 E-value=0.13 Score=53.67 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=49.3
Q ss_pred HhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHHHHHHHHHHHH
Q 037418 10 YAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWMLLVSSLAYSA 71 (427)
Q Consensus 10 Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~i~~g~~~~~~ 71 (427)
||.. -+.+|+++..|++..+++.+...+.+...+..++.|+++||. ..++..+..+..++.+
T Consensus 290 ~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 290 YGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred ccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 4555 577888886779999999999999999999999999999994 4566666555555554
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=94.12 E-value=0.0021 Score=65.80 Aligned_cols=142 Identities=15% Similarity=-0.001 Sum_probs=78.7
Q ss_pred HHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcC--CCCCCCC---chhHHHH
Q 037418 17 TYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEY--KPECIGE---GQKILFY 90 (427)
Q Consensus 17 ~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~--~~~~~~~---~~~~~~~ 90 (427)
.++.+..+.++. ............+..+++.++.|| +|||+.++.+.+++.+ .+... ....... .+... .
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i 352 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS-I 352 (451)
T ss_pred cccccccccccc--cccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc-c
Confidence 334445566666 112223334556777888899999 5999999999888776 11111 1000001 11111 1
Q ss_pred HHHHH-HHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec---cchhHhHHHHH
Q 037418 91 TALGL-IAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK---PWKIRFGIPAI 164 (427)
Q Consensus 91 ~~l~l-i~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~---g~~~~F~i~~v 164 (427)
....+ ......+..+....+.+|.++.+. |..... +...++|+++++.+.+++. +-...|.+-++
T Consensus 353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~---------R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~ 423 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPLPWIYTAELFPTKV---------RSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAG 423 (451)
T ss_pred eeeeeccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccchhhHH
Confidence 22222 222222455667788899998653 344444 6777788888888877766 32344555555
Q ss_pred HHHHHHH
Q 037418 165 FTVVATL 171 (427)
Q Consensus 165 ~~~i~~i 171 (427)
.++++.+
T Consensus 424 ~~~i~~i 430 (451)
T PF00083_consen 424 VCLIAII 430 (451)
T ss_pred HHHHHHh
Confidence 5444443
No 227
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.24 E-value=1.4 Score=47.84 Aligned_cols=147 Identities=13% Similarity=0.205 Sum_probs=100.9
Q ss_pred hhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-----hhhcCC----------------
Q 037418 19 LTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-----VSYEYK---------------- 77 (427)
Q Consensus 19 l~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-----~~~~~~---------------- 77 (427)
+.+.++++.++.+.+...+-...-+..++-.|.+-|. -|-|.|-+|.+++.+ .+|-..
T Consensus 123 iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~ 201 (735)
T KOG3626|consen 123 IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVE 201 (735)
T ss_pred hhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcccc
Confidence 3346899999999999999998888888889999885 888888777777755 222100
Q ss_pred -C---------------------CCC---CCc--hhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHH
Q 037418 78 -P---------------------ECI---GEG--QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKL 130 (427)
Q Consensus 78 -~---------------------~~~---~~~--~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~ 130 (427)
+ .+. ... -+..++.|..+.++|.--+.|--.+++=|-.++++ ..
T Consensus 202 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~---------Sp 272 (735)
T KOG3626|consen 202 NPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKN---------SP 272 (735)
T ss_pred CCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccC---------Cc
Confidence 0 000 011 12356678999999988877776666655433322 22
Q ss_pred HHHH--HHHHHHHHHHHhhhhceec----------------------cchhHhHHHHHHHHHHHHHHHh
Q 037418 131 FFFS--FCGVVLVPIIALIAFPYIK----------------------PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 131 ~~f~--Y~~iNiG~~i~~~~~~~l~----------------------g~~~~F~i~~v~~~i~~iif~~ 175 (427)
.++. |..--+|.++|.+++++.- -||.||++++..++++.+-++.
T Consensus 273 lYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 273 LYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344 6677788888887776531 5999999999988887776665
No 228
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=93.15 E-value=0.32 Score=50.48 Aligned_cols=123 Identities=7% Similarity=-0.130 Sum_probs=83.1
Q ss_pred HhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh-h--cCC--CCCCC-CchhHHHHHHHH
Q 037418 21 NVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS-Y--EYK--PECIG-EGQKILFYTALG 94 (427)
Q Consensus 21 ~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~-~--~~~--~~~~~-~~~~~~~~~~l~ 94 (427)
+.+|++..+.+.+....+....+...+.+.+.+| ++.|+++.++.++..+.. . .+. ..... ....+.......
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 4689999999999998887777777777777776 599999999988887722 1 110 00000 011223444566
Q ss_pred HHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec
Q 037418 95 LIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 95 li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~ 153 (427)
+..++.|..-.....+..+.-+++.. .+.|. ....|+|..+++.+++++.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~e---------gt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCE---------SSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCce---------ehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888777778888887665432 33444 4456888888888777775
No 229
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.97 E-value=0.025 Score=59.74 Aligned_cols=158 Identities=13% Similarity=0.166 Sum_probs=2.7
Q ss_pred HHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-----hhhcCC-C-
Q 037418 7 FAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-----VSYEYK-P- 78 (427)
Q Consensus 7 fs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-----~~~~~~-~- 78 (427)
...+|.. .-..-+.+.++++.++++.+...+-....+..++-.+.++|. .|-|-|-+|++++.+ .+|-+. +
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 4455555 333456678999999999999999999999999999999985 788888888777766 233221 0
Q ss_pred ------------------CC---------------C---C---CchhHHHHHHHHHHHhhcccccccccchhcccCCcch
Q 037418 79 ------------------EC---------------I---G---EGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSR 119 (427)
Q Consensus 79 ------------------~~---------------~---~---~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~ 119 (427)
.| . . ......+.+|-.+.++|..-+.+--.+++=|-.+++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~- 173 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK- 173 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc-
Confidence 12 0 0 112345667888888888877766666554432221
Q ss_pred hhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec-------------------------cchhHhHHHHHHHHHHHH
Q 037418 120 AEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK-------------------------PWKIRFGIPAIFTVVATL 171 (427)
Q Consensus 120 ~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~-------------------------g~~~~F~i~~v~~~i~~i 171 (427)
....|- |....+|.++|.++++..- -||+||.++++..++..+
T Consensus 174 ---------~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 174 ---------NSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------cCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 233333 7777888888877765431 499999998888776665
Q ss_pred HHHh
Q 037418 172 VFLS 175 (427)
Q Consensus 172 if~~ 175 (427)
-++.
T Consensus 245 pl~~ 248 (539)
T PF03137_consen 245 PLFF 248 (539)
T ss_dssp ----
T ss_pred HHHc
Confidence 5554
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=92.82 E-value=1.3 Score=46.30 Aligned_cols=139 Identities=12% Similarity=-0.033 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhhhHH----HHhhhcccchHHHHHHHHHHHHHhhhc--CCCCC---CCCchhHHHHHHHHHHHhhc
Q 037418 30 AAAIVNFFWGTVLMLPLAI----QYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPEC---IGEGQKILFYTALGLIAFGM 100 (427)
Q Consensus 30 A~~~~~~~~~~~y~~~~~G----G~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~---~~~~~~~~~~~~l~li~~g~ 100 (427)
++.+.+.......++.++. +.+.|| ++..+.+.+|.++..+.... ..... ....+.+.+.....+.++|.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge 396 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGE 396 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Confidence 3333344444555555555 444555 35667788888777762111 11000 01234556778899999999
Q ss_pred ccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc-----ee------c--cchhHhHHHHHH
Q 037418 101 SGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP-----YI------K--PWKIRFGIPAIF 165 (427)
Q Consensus 101 g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~-----~l------~--g~~~~F~i~~v~ 165 (427)
++..|...+++.+.-+++. +..... +.+.-+|+.++..+.. .. . +++..|..-++.
T Consensus 397 ~~~~p~g~s~~~~~aP~~~---------rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 467 (500)
T PRK09584 397 LMISGLGLAMVAQLVPQRL---------MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIA 467 (500)
T ss_pred HHHhHHHHHHHHHhCcHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHH
Confidence 9999999999998754422 233333 5555566666655442 11 1 477788766655
Q ss_pred HHHHHHHHHhccc
Q 037418 166 TVVATLVFLSGTC 178 (427)
Q Consensus 166 ~~i~~iif~~~~~ 178 (427)
.++..++++...+
T Consensus 468 ~~~~a~~~~~~~~ 480 (500)
T PRK09584 468 TAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHH
Confidence 5444444444333
No 231
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.89 E-value=17 Score=37.55 Aligned_cols=66 Identities=20% Similarity=0.407 Sum_probs=48.8
Q ss_pred HHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcc
Q 037418 42 LMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMAD 113 (427)
Q Consensus 42 y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~d 113 (427)
-+++++++-+-|. +|.|+++.+|+..+.....+.. ..+...++.+=+++++|.++...---.+..+
T Consensus 64 tv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl-----~~N~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 64 TVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFL-----FPNSYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred HHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHH-----hcchHHHHHHHHHhhhhHHheecccceehhh
Confidence 3567778888998 5999999999999987333322 1245678888999999999776655555544
No 232
>PRK03612 spermidine synthase; Provisional
Probab=91.25 E-value=2.7 Score=44.29 Aligned_cols=152 Identities=9% Similarity=0.062 Sum_probs=80.8
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCC--CCCCCCchhHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYK--PECIGEGQKILFY 90 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~--~~~~~~~~~~~~~ 90 (427)
.++-.+...+|-+...-+.++++|.+..-++..++|.++++-..++-.+-++..+... ..+.+. ... ........+
T Consensus 36 ~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~ 114 (521)
T PRK03612 36 LLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF-QGLSRLLLY 114 (521)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4555555668999999999999999999999999998885543333322222211111 111110 000 000111122
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhceec----cc-hhHhHHHH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYIK----PW-KIRFGIPA 163 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~----g~-~~~F~i~~ 163 (427)
..+.+.++-.|+.-|-+..+..+..++ +. .+... |....+|+.+|.++.+++- |- ...+.++.
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~~~-~~---------g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIRDQ-HL---------GHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc-ch---------hhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 223344555555555555444332111 11 11223 8889999999988877664 43 34455555
Q ss_pred HHHHHHHHHHHhc
Q 037418 164 IFTVVATLVFLSG 176 (427)
Q Consensus 164 v~~~i~~iif~~~ 176 (427)
+.++++++.....
T Consensus 185 l~~~~a~~~~~~~ 197 (521)
T PRK03612 185 LNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555444433
No 233
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=90.29 E-value=4.8 Score=40.89 Aligned_cols=103 Identities=13% Similarity=0.042 Sum_probs=61.8
Q ss_pred HHHHHhhHhcCC---chHHHHHHHH----HHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCc
Q 037418 14 VMITYLTNVWKI---SLVRAAAIVN----FFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEG 84 (427)
Q Consensus 14 ~l~~yl~~~l~~---~~~~A~~~~~----~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~ 84 (427)
++-+|+++..+- +..+++...+ +..-+..+..++-|-+||..--||+.+-....+..+.... ..++ ..
T Consensus 37 ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~---~s 113 (438)
T COG2270 37 IFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP---GS 113 (438)
T ss_pred hhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC---Cc
Confidence 678899987655 5444444433 2233333444555889999733445555555554442221 2221 13
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCcch
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSR 119 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~ 119 (427)
+++....-+++..++..+-..+-+++.-|..++++
T Consensus 114 ~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 114 YLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred hHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 45555566777888888888889999988766544
No 234
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=89.65 E-value=1 Score=48.63 Aligned_cols=68 Identities=13% Similarity=0.021 Sum_probs=54.4
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHH-HHHHhhhHHHHhhhcccc--hHHHHHHHHHHHHH
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWG-TVLMLPLAIQYLVDTIIG--NYWMLLVSSLAYSA 71 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~-~~y~~~~~GG~laD~~lG--r~~~i~~g~~~~~~ 71 (427)
+.+-+.++++. .+..|+++.+|++..+++.+.+.... ...+..+++|++.||+ + .++++.++.++.++
T Consensus 340 ~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~~~ 411 (633)
T TIGR00805 340 VIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLSTL 411 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHHHH
Confidence 45667888888 89999999999999999999887665 4568889999999996 5 55666666655554
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=89.64 E-value=0.85 Score=48.70 Aligned_cols=136 Identities=9% Similarity=-0.033 Sum_probs=87.8
Q ss_pred Hhc-CC-chHH-HHHHHHHHHHHHHHhhhHHHHhhhcccchHH-------HHHHHHHH-HHH-hhhcCCCCCCCCchhHH
Q 037418 21 NVW-KI-SLVR-AAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW-------MLLVSSLA-YSA-VSYEYKPECIGEGQKIL 88 (427)
Q Consensus 21 ~~l-~~-~~~~-A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~-------~i~~g~~~-~~~-~~~~~~~~~~~~~~~~~ 88 (427)
+.+ |+ .+++ ...++..++..++++-+.+|++. .++-||+ ++...... +.+ ++.... ......
T Consensus 381 ~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~-----~~p~~~ 454 (591)
T PTZ00207 381 TALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSVCIITMLTLFL-----TLPKAA 454 (591)
T ss_pred HHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHHHHHHHHHHHH-----HCCccH
Confidence 346 66 3332 22378899999999999999998 5555554 33333222 222 333221 111147
Q ss_pred HHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHH-hhhhcee-------------
Q 037418 89 FYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIA-LIAFPYI------------- 152 (427)
Q Consensus 89 ~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~-~~~~~~l------------- 152 (427)
++++-+++++++|...+...+...+.|. +|. ..-|| +.+.-+|+.+= -.+.+.+
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~---------g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C 524 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA-KDP---------AKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVC 524 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cch---------HHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCee
Confidence 8999999999999999999999999998 553 34666 77777777653 1223322
Q ss_pred -c--cchhHhHHHHHHHHHHHHH
Q 037418 153 -K--PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 153 -~--g~~~~F~i~~v~~~i~~ii 172 (427)
+ +++..|.+.++..+++.++
T Consensus 525 ~G~~C~~~~~~v~~~~~~~g~~~ 547 (591)
T PTZ00207 525 TERVCVVMPLAFLLGLSFLAFIT 547 (591)
T ss_pred CCceeeHhHHHHHHHHHHHHHHH
Confidence 1 7889997666655555544
No 236
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=89.02 E-value=14 Score=37.35 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=85.1
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHHHHHHHHHhh
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFYTALGLIAFG 99 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~li~~g 99 (427)
..|.+..++..+......-..+....=|.++|++ ||||...+..+...+ .+.... .+...+.+-..+.+.|
T Consensus 107 ~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s------pnf~~L~~f~~l~~~g 179 (528)
T KOG0253|consen 107 VWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS------PNFASLCVFRALWGFG 179 (528)
T ss_pred hhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC------CCeehhhHHHHHHhcc
Confidence 4578888888887776666677888889999995 999998888777766 333332 3444566667788899
Q ss_pred cccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHh----hhhceeccchhH-hHHHHHHHHHHHHHHH
Q 037418 100 MSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIAL----IAFPYIKPWKIR-FGIPAIFTVVATLVFL 174 (427)
Q Consensus 100 ~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~----~~~~~l~g~~~~-F~i~~v~~~i~~iif~ 174 (427)
.|+ -|-..+.-++-.+....- .....+.+|. +|.++.. .+..+. ||++- |....-.|+++...++
T Consensus 180 ~gg-~pv~~~~yle~lp~~~r~------~~~V~~~~wa--ig~v~ea~law~vm~~~-gwr~~l~~~~~pl~~~a~f~~w 249 (528)
T KOG0253|consen 180 VGG-LPVDSAIYLEFLPSSHRW------LLTVMSFFWA--IGQVFEALLAWGVMSNF-GWRYLLFTSSTPLMFAARFLVW 249 (528)
T ss_pred CCC-ccHhHHHHHHhccCcCCC------cchhHHHHHH--HHHHHHHHHHHHHHHhh-hHHHHHHHHHhHHHHHHHHHhh
Confidence 999 888888777765543211 1111111332 3444432 222222 77764 4455555665555554
Q ss_pred h
Q 037418 175 S 175 (427)
Q Consensus 175 ~ 175 (427)
.
T Consensus 250 ~ 250 (528)
T KOG0253|consen 250 V 250 (528)
T ss_pred c
Confidence 3
No 237
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=88.89 E-value=5.1 Score=40.83 Aligned_cols=137 Identities=12% Similarity=0.191 Sum_probs=85.7
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHH----HHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTV----LMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~----y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~ 87 (427)
-...|.+..+ -+..+.+.+++.-.... .+.=.+..++-+| +|.|+.++++..++.+ ....+. .+++
T Consensus 242 qf~~y~~~~f-~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~------~~~~ 313 (412)
T PF01306_consen 242 QFPIYFASFF-QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFA------TNPW 313 (412)
T ss_dssp HHHHHHHHTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT--------SHH
T ss_pred HHHHHHHHHh-cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhh------cchH
Confidence 3455555433 34444445554444333 3344456778888 5999999999999988 333332 3556
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec---cchhHhHH
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK---PWKIRFGI 161 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~---g~~~~F~i 161 (427)
.+.+.=.+-++-.++.-..+--++++++|++- ..+.+. -.+..+|..+-+.++|++. |++-.|.+
T Consensus 314 ~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl---------sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tyli 384 (412)
T PF01306_consen 314 VISLIKLLHALEFPLLLVAAFKYITAHFDKRL---------SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLI 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG---------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH---------HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHH
Confidence 66667777888888888888889999887542 233433 2566777777777888776 88888764
Q ss_pred HHHHHH
Q 037418 162 PAIFTV 167 (427)
Q Consensus 162 ~~v~~~ 167 (427)
=+...+
T Consensus 385 mg~iv~ 390 (412)
T PF01306_consen 385 MGLIVL 390 (412)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=88.24 E-value=0.79 Score=47.80 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=49.3
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA 71 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~ 71 (427)
.|..|.. .||++..+.+.+++.--....+.+++-|++|||+ -++|.+++|+.+..+
T Consensus 33 ll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v 88 (618)
T KOG3762|consen 33 LLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSV 88 (618)
T ss_pred HHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHH
Confidence 6778876 5999999999999999999999999999999997 777888888777665
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=86.93 E-value=7.1 Score=39.73 Aligned_cols=145 Identities=13% Similarity=0.140 Sum_probs=86.6
Q ss_pred HHHHhhHh-cCCchHHHHH-HHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH--hhhcCCCCCCCCchhHHHH
Q 037418 15 MITYLTNV-WKISLVRAAA-IVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA--VSYEYKPECIGEGQKILFY 90 (427)
Q Consensus 15 l~~yl~~~-l~~~~~~A~~-~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~ 90 (427)
++-|++++ -|+++.+-+. ++-.++-.....-++.+.+.|. +|.|..++++++...+ .+.... .+...
T Consensus 26 l~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~------~sv~~-- 96 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFG------TSVLA-- 96 (412)
T ss_pred chHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHH------CcHHH--
Confidence 78888887 8999888764 4444444444556667899997 5777788877777665 222121 12222
Q ss_pred HHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH----HHHHHHHHHHHhhhhceec-cchhHhHHHHHH
Q 037418 91 TALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS----FCGVVLVPIIALIAFPYIK-PWKIRFGIPAIF 165 (427)
Q Consensus 91 ~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~----Y~~iNiG~~i~~~~~~~l~-g~~~~F~i~~v~ 165 (427)
|-+.=+-.|...++-.++-+-.|..-|+++ -++-..++ -.+.-+|+++|.++...=. +|...+.++...
T Consensus 97 --mq~~q~~yg~~~a~evay~sYiys~v~~~~----yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~ 170 (412)
T PF01770_consen 97 --MQLMQFFYGLATAAEVAYYSYIYSVVDKEH----YQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLAS 170 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHheeecCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 223333334444444555555565544432 22334444 4566677777776665443 788888888888
Q ss_pred HHHHHHHHH
Q 037418 166 TVVATLVFL 174 (427)
Q Consensus 166 ~~i~~iif~ 174 (427)
+.+++++-+
T Consensus 171 ~~~a~~~~~ 179 (412)
T PF01770_consen 171 VSLALLIAL 179 (412)
T ss_pred HHHHHHHHH
Confidence 877776643
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=86.44 E-value=6 Score=41.22 Aligned_cols=169 Identities=11% Similarity=0.008 Sum_probs=91.7
Q ss_pred ChhhHHHHHHhHHHHHHHhhHhcC-----Cch------HHH---HHHHH-HHHHHHHHhhhHHHHhhhcccch-HHHHHH
Q 037418 1 LFWADIFAAYAMWVMITYLTNVWK-----ISL------VRA---AAIVN-FFWGTVLMLPLAIQYLVDTIIGN-YWMLLV 64 (427)
Q Consensus 1 ~~~~eRfs~Yg~~~l~~yl~~~l~-----~~~------~~A---~~~~~-~~~~~~y~~~~~GG~laD~~lGr-~~~i~~ 64 (427)
+++++=|+++|..-+.+|.|+..| -++ .++ +.... .++....+..++--.+.++ +|+ |++-.+
T Consensus 263 l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~-~g~~k~~~~~ 341 (477)
T TIGR01301 263 LLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG-WGAGKRLWGI 341 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHH
Confidence 467889999999855577776433 211 122 22222 2222223555555667777 475 455455
Q ss_pred HHHHHHH---hhhcCCC------CC-------CCCch-hHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhh
Q 037418 65 SSLAYSA---VSYEYKP------EC-------IGEGQ-KILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRS 127 (427)
Q Consensus 65 g~~~~~~---~~~~~~~------~~-------~~~~~-~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~ 127 (427)
+.++..+ ....+.. +. ..... .+...+...++++..+.+...-.+++++..++++.+ ..
T Consensus 342 s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~----~G 417 (477)
T TIGR01301 342 VNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG----QG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC----Cc
Confidence 5444443 1111110 00 00011 355556677788888888888889999876643221 11
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhceec-----cchhHhHHHHHHHHHHHHHHHh
Q 037418 128 AKLFFFSFCGVVLVPIIALIAFPYIK-----PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 128 ~~~~~f~Y~~iNiG~~i~~~~~~~l~-----g~~~~F~i~~v~~~i~~iif~~ 175 (427)
.--..+| .++-+...+..+..+.+. +-..+|.++++.++++.+.-+.
T Consensus 418 ~~mgilN-~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 418 LSMGVLN-LAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred chhhHHH-HHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 1123454 445555555444433322 5567888999999888766553
No 241
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.93 E-value=0.12 Score=49.67 Aligned_cols=102 Identities=8% Similarity=-0.014 Sum_probs=74.9
Q ss_pred HHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH-HHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 15 MITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW-MLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 15 l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~-~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
|.+|...+++.+.++-+++++.++--..+.|++|||+-||.+|-|. |++.+.+++.-.+.... .......|....|.
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~--Ggi~~aFw~M~~GR 143 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAA--GGISHAFWTMLAGR 143 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHh--chHHHHHHHHHhhh
Confidence 4566666778888889999999999999999999999999999765 56666555544222111 01134678888899
Q ss_pred HHHHhhcccccccccchhcccCCcc
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDS 118 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~ 118 (427)
.+.++|.-.....-+.+..--|+.+
T Consensus 144 F~FGIGgESlAVaQN~yav~wFKGK 168 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFKGK 168 (459)
T ss_pred eeeccCchhhhhhhcceeEEEecCc
Confidence 9999998887777777776666554
No 242
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=83.85 E-value=5.3 Score=40.21 Aligned_cols=123 Identities=15% Similarity=0.091 Sum_probs=81.1
Q ss_pred hHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHHHh
Q 037418 20 TNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLIAF 98 (427)
Q Consensus 20 ~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li~~ 98 (427)
+..+|+++.|.+.++..-+....+.++.-+...|+..|.-++.+.-..+..+ .+..+. .......++.++.+-++
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls----~~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS----LARTPVVLYLGSTLKSF 364 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh----ccccchhhhHHHHHHHH
Confidence 4678999999998887777766677777777788887776666555555444 222221 02234678899999999
Q ss_pred hcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec
Q 037418 99 GMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 99 g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~ 153 (427)
.++...||+..++..-.+++ . |......+ --...++=++||.+.+.++
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~-q-----rG~~~Gi~-~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQS-Q-----RGTLNGIF-RSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcc-c-----chHHHHHH-HHHHHHHHHhhhhhhheeE
Confidence 99999999999998755433 2 21222222 2333444567777776665
No 243
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.38 E-value=5.3 Score=40.42 Aligned_cols=86 Identities=16% Similarity=0.193 Sum_probs=69.1
Q ss_pred ecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCc
Q 037418 310 VPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKI 389 (427)
Q Consensus 310 ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 389 (427)
....++.....++-++.-|+...+..+...| .-|.+|++++..|.++.++.+
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~--------ipm~~Gl~vmf~sTilFafg~-------------------- 157 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYK--------IPMVAGLFVMFLSTILFAFGN-------------------- 157 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccc--------cHHHHHHHHHHHHHHHHHHcc--------------------
Confidence 3345666777788888889999888877655 358899999999998877754
Q ss_pred cchHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 390 PMSMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 390 ~~s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
|++.++..-.++|+|..+++..|++...+.-|++
T Consensus 158 --sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d 191 (464)
T KOG3764|consen 158 --SYPMLFVARSLQGVGSAFADTSGLAMLADVFPED 191 (464)
T ss_pred --hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccc
Confidence 3445777789999999999999999999998875
No 244
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=81.09 E-value=9.6 Score=30.76 Aligned_cols=79 Identities=18% Similarity=0.207 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccchHHHH
Q 037418 317 LFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKIPMSMFWL 396 (427)
Q Consensus 317 ~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~s~~wl 396 (427)
....+..++..|+..++.++..+| +-+.++..+.+++.+..... -+.++.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~--------~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 54 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK--------PVLLVGLFIFVLSTAMFALS----------------------SNITVL 54 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh--------HHHHHHHHHHHHHHHHHHHh----------------------ccHHHH
Confidence 345566667778887777665444 23444555555554433221 134455
Q ss_pred HHHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 397 LPQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 397 v~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
....++.+++.-...+.......+..|++
T Consensus 55 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 55 IIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 56678888888888888888888887764
No 245
>PF01891 CbiM: Cobalt uptake substrate-specific transmembrane region; InterPro: IPR002751 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the integral membrane protein CbiM, which is involved in cobalamin synthesis, although its exact function in unknown.; GO: 0009236 cobalamin biosynthetic process, 0016021 integral to membrane
Probab=80.18 E-value=23 Score=32.34 Aligned_cols=98 Identities=18% Similarity=0.126 Sum_probs=60.5
Q ss_pred hhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccchHHHHH
Q 037418 318 FYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKIPMSMFWLL 397 (427)
Q Consensus 318 ~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~s~~wlv 397 (427)
.|.+...+..++..+..+|..+| . .+..++..+++-..++....+..-.-........+ +.+.........
T Consensus 107 ~N~l~m~~~~~~~~~~~~~~l~~-~---~~~~~~~~~F~ag~l~~~~~~~~~~~~l~l~~~~~-----~~~~~~~~~~~~ 177 (205)
T PF01891_consen 107 ANALNMGVPPVLVSYLLFRLLRR-K---FPRNIFVAGFLAGFLSVLLAALAVSLVLGLSGTAG-----DYPWMALVQAYL 177 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-c---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cccHHHHHHHHH
Confidence 56666666667777777776555 2 23455666666556665554443322222221111 011233444567
Q ss_pred HHHHHHHHHhHhhhhhhHHHHHhcCCC
Q 037418 398 PQFLLLGGFDGVCEVSIACFFIDQFPP 424 (427)
Q Consensus 398 ~~y~l~~~gEl~~~~~~lef~~~~aP~ 424 (427)
+.+.++++.|.++.-....+..+.-|+
T Consensus 178 ~~~~~l~~~Eg~ltg~~v~~l~~~rP~ 204 (205)
T PF01891_consen 178 PSHLLLAFPEGFLTGMVVTFLVVYRPE 204 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888999999999999999999998886
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=78.59 E-value=18 Score=37.68 Aligned_cols=120 Identities=19% Similarity=0.133 Sum_probs=69.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccch-HHHHHHHHHHHHH-hhhcCCCCCCCCchhHHHHHHHHHHHhhc
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGN-YWMLLVSSLAYSA-VSYEYKPECIGEGQKILFYTALGLIAFGM 100 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr-~~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~li~~g~ 100 (427)
.+-+.+--+.++++......++.++-|+-.-|. |+ |+-++.|.+++++ ++.-+.-.+......+...++..+.++|.
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 455556667777776666666777777777775 53 7777788888777 22111100001225678889999999998
Q ss_pred ccccccccchhcccCCcchhhhhhhhhhHHHHHH------HHHHHHHHHHHhhhhceec
Q 037418 101 SGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS------FCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 101 g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~------Y~~iNiG~~i~~~~~~~l~ 153 (427)
|..-.+ =++++|--..+| |.+.+. =.++-+|..+++.+++..+
T Consensus 145 ~n~a~l-R~Y~a~~s~~~d---------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~ 193 (488)
T KOG2325|consen 145 GNFAVL-RAYIADASTVED---------RPRAFAATSGGFVLGIILGPTIQLAFTPLGE 193 (488)
T ss_pred ccHHHH-HHHHHhccCccc---------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC
Confidence 765332 344444322222 333443 3455566666666666554
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=78.45 E-value=19 Score=28.03 Aligned_cols=62 Identities=16% Similarity=0.036 Sum_probs=39.4
Q ss_pred HHHHHhHHHHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH
Q 037418 6 IFAAYAMWVMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA 71 (427)
Q Consensus 6 Rfs~Yg~~~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~ 71 (427)
||+|=- +...+.++.++|.++++.+-++...-..+..+....+.++ -.+++.+..+.++..+
T Consensus 8 RFayTp---lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~ 69 (85)
T PF06779_consen 8 RFAYTP---LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVL 69 (85)
T ss_pred HHHHHh---HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHH
Confidence 566543 4466778999999999877655544444444444555554 2556677777766665
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=77.78 E-value=1.6 Score=44.67 Aligned_cols=133 Identities=12% Similarity=0.064 Sum_probs=87.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcc---cchHHHHHHHHHHHHH-hhhc--CCCC-----CC-
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTI---IGNYWMLLVSSLAYSA-VSYE--YKPE-----CI- 81 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~---lGr~~~i~~g~~~~~~-~~~~--~~~~-----~~- 81 (427)
.++.|+. .+|.+....+.+-..--....+.+++-|..+||+ +||||-.+....+.+. .+.. ..++ ++
T Consensus 54 y~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 54 YLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred cccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 3555664 5788888888877777777788888889999986 7999987766555443 2111 1100 11
Q ss_pred -----CCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec
Q 037418 82 -----GEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK 153 (427)
Q Consensus 82 -----~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~ 153 (427)
.......+.++..++=+.+-..+...-++.+|...+++.++ +-.+.|. ..+.+|..+|..+.+|..
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~-----~Ans~f~-~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKT-----RANSVFS-FFMAVGNVLGYALGSYLG 203 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhh-----ccchhHH-HHHHhcceeeeecccccC
Confidence 12234456677777777787788888899999876654322 1234443 557778888877777765
No 249
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=75.92 E-value=54 Score=34.20 Aligned_cols=47 Identities=19% Similarity=0.125 Sum_probs=32.7
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHH
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSA 71 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~ 71 (427)
.|.+... ....-.......++.++++++-||+ |||+.++.|...+.+
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGMSI 371 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHHHH
Confidence 3444332 3333344445567777889999996 999999999988776
No 250
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=73.94 E-value=9.2 Score=39.68 Aligned_cols=123 Identities=11% Similarity=0.108 Sum_probs=84.0
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTAL 93 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (427)
++.+|+..+++++..+.+...+..+...++..+++..+--+.+|-++.+.+|.....+...... ...+.|..+.+
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~a----f~~~~w~~~~~- 337 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFA----FATETWMMFAA- 337 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHH----HhccchhhhHH-
Confidence 3346777789999999999999999999999999986666678999999999888776221111 01344555544
Q ss_pred HHHHhhcccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhc
Q 037418 94 GLIAFGMSGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFP 150 (427)
Q Consensus 94 ~li~~g~g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~ 150 (427)
..++...+...|.+.++...+-++++. -..+. ...-++..++++.+-+
T Consensus 338 ~v~~~~~~~~~pa~~s~~s~~v~~~e~---------g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 338 GVVVALAGIVFPAIRAFASILVSPEEQ---------GKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred HHHHHhhcchhHHHHhHHHhhcccccc---------cchhhHHHHHHHHhhhhhHHHHH
Confidence 445566778889999999987665432 23333 4455555555544433
No 251
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=72.79 E-value=4.5 Score=41.63 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=72.5
Q ss_pred HHHHH-hhhHHHHhhhcccchHHHHHHHHHHHHHhhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhc--ccC
Q 037418 39 GTVLM-LPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMA--DQM 115 (427)
Q Consensus 39 ~~~y~-~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~--dq~ 115 (427)
.+.++ ..+++.++.|+ +||++.-+-|.+++.+....+.-+++...+...+ ..+.-+..-.+=+-||-..++- +.+
T Consensus 358 ~~~~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf-~v~y~l~~ff~NFGPn~ttfivpaE~F 435 (538)
T KOG0252|consen 358 VCSTVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGF-VVLYSLTFFFGNFGPNATTFIVPAEIF 435 (538)
T ss_pred HHccCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHHHcCCcccccccCce-eehHHHHHHHHhcCCCceeEEeehhhc
Confidence 33444 66778889999 6999999999988887222222111111111111 1222233333445566666553 333
Q ss_pred CcchhhhhhhhhhHHHHHH---HHHHHHHHHHHhhhhceec--------cchhHhHHHHHHHHHHHHHHHh
Q 037418 116 TDSRAEQVSMRSAKLFFFS---FCGVVLVPIIALIAFPYIK--------PWKIRFGIPAIFTVVATLVFLS 175 (427)
Q Consensus 116 ~~~~~~~~~~~~~~~~~f~---Y~~iNiG~~i~~~~~~~l~--------g~~~~F~i~~v~~~i~~iif~~ 175 (427)
+. + .++..+ -.+--+|+.+|.....++. |.+..|.+.+.+|.++.++.++
T Consensus 436 Pa----r------vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 436 PA----R------VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred hH----H------HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 22 1 233333 4455677888777666664 7788899999999888877654
No 252
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=69.37 E-value=6.5 Score=41.25 Aligned_cols=118 Identities=13% Similarity=0.056 Sum_probs=77.7
Q ss_pred hHHHHhhhcccchHHHHHHHHHHHHH---hhhcCCCCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCCcchhhh
Q 037418 46 LAIQYLVDTIIGNYWMLLVSSLAYSA---VSYEYKPECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMTDSRAEQ 122 (427)
Q Consensus 46 ~~GG~laD~~lGr~~~i~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~~~~~~ 122 (427)
++-+++-.+ +|+-|.+.+|.....+ .+..+ .++|..+.-=.+-++..|.+..++.+++.+.-+++-.
T Consensus 424 ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~-- 493 (618)
T KOG3762|consen 424 FFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLR-- 493 (618)
T ss_pred HHHHHHHHH-hcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcch--
Confidence 344577776 5999999988877776 22222 3567666677888999999999999999998776542
Q ss_pred hhhhhhHHHHHH--HH--HHHHHHHHHhhhhceeccchhHhHHHHHHHHHHHHHHHhccc
Q 037418 123 VSMRSAKLFFFS--FC--GVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVATLVFLSGTC 178 (427)
Q Consensus 123 ~~~~~~~~~~f~--Y~--~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~iif~~~~~ 178 (427)
+..+..+. |. +-.+|++||..+.-++ |=+..|-+.+++.++.++.|..-++
T Consensus 494 ----at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 494 ----ATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred ----HHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 23455554 33 4467777776555554 4444555555555555555555443
No 253
>PRK07331 cobalt transport protein CbiM; Provisional
Probab=65.46 E-value=57 Score=32.14 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=54.2
Q ss_pred hhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcCCCCCCCCCccc-
Q 037418 318 FYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVI-----RSHGLIDKPDDKIPM- 391 (427)
Q Consensus 318 ~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~- 391 (427)
.|.+...+..|+..+.++|..+| . .++....+..+++-..++....++.-.-..... +.+|... ..+.+.
T Consensus 108 aN~l~ma~~~~~v~y~iyr~~~~-~-~~~~~~~~~~~f~gg~l~i~~~al~~al~l~~~~~~~~~~~g~~~--~~~~~~~ 183 (322)
T PRK07331 108 ANCFNMAFIMPFVGYYIYKFIKK-W-TKSKKGEYIGAFIGGYIGINVAALFAAIEFGLQPLLFKDASGLPL--YSPYPLS 183 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-h-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCccc--cccchHH
Confidence 45554445556667777766544 1 222333444455555555544333221111110 0111000 001122
Q ss_pred -hHHHHHHHHHHH-HHHhHhhhhhhHHHHHhcCCCC
Q 037418 392 -SMFWLLPQFLLL-GGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 392 -s~~wlv~~y~l~-~~gEl~~~~~~lef~~~~aP~~ 425 (427)
+..-+.+..+.+ ++.|-.+......|..+..|+-
T Consensus 184 ~~~~~m~~~hl~i~gi~Eg~iT~~v~~~l~~~~p~l 219 (322)
T PRK07331 184 VTIPAMLLPHLLVAGILEGIFTALVFSFIKRVSPGI 219 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 233356666776 9999999999999999999874
No 254
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=59.77 E-value=18 Score=27.44 Aligned_cols=53 Identities=19% Similarity=0.142 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhceeccchhHhHHHHHHHHHHHHHHHhcccceeec
Q 037418 130 LFFFSFCGVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVATLVFLSGTCSYRRR 183 (427)
Q Consensus 130 ~~~f~Y~~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~iif~~~~~~~~~~ 183 (427)
+..+ ...+-+++++|.+.+-..|+++..+.+-+++.++++++.+--.+.|+++
T Consensus 10 e~l~-~~il~~~~iisfi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~r~ 62 (76)
T PF06645_consen 10 EKLM-QYILIISAIISFIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYNRH 62 (76)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhcCC
Confidence 4444 4667777877755544444999999999999999999998888877543
No 255
>PF14007 YtpI: YtpI-like protein
Probab=58.46 E-value=16 Score=28.70 Aligned_cols=54 Identities=22% Similarity=0.363 Sum_probs=39.4
Q ss_pred HHHHH-HHHHHHHHHHHhhhhceec----cchhHhHHHHHHHHHHHHHHHhcccceeecCC
Q 037418 130 LFFFS-FCGVVLVPIIALIAFPYIK----PWKIRFGIPAIFTVVATLVFLSGTCSYRRRKP 185 (427)
Q Consensus 130 ~~~f~-Y~~iNiG~~i~~~~~~~l~----g~~~~F~i~~v~~~i~~iif~~~~~~~~~~~p 185 (427)
+..++ =..+.+|.++... +.-| +-+..+.++++.+++|+...+.|-|.|++-.|
T Consensus 28 k~~~~aka~ialG~fl~~f--giNQ~~~~~st~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 28 KKWYSAKANIALGIFLILF--GINQMFLFGSTVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHcccHHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 34555 6778888876532 3333 55678889999999999999999888877655
No 256
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=57.52 E-value=26 Score=36.16 Aligned_cols=80 Identities=13% Similarity=0.175 Sum_probs=60.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccchHH
Q 037418 315 LLLFYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKIPMSMF 394 (427)
Q Consensus 315 ~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~s~~ 394 (427)
+|+.-.+.-.+..|+...+=.+..|+ .=|++|.++=.++.+..+.. +-+
T Consensus 73 l~~vf~v~~~i~sPl~gyLadryNR~--------~v~~vG~~iW~~Av~~~~fs-----------------------~~F 121 (493)
T KOG1330|consen 73 LQTVFIVVFMIASPLFGYLADRYNRK--------RVIAVGIFIWTLAVFASGFS-----------------------NHF 121 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcc--------eEEeeHHHHHHHHHHHHHHH-----------------------HHH
Confidence 56555566678899999888777655 45788888877777665443 335
Q ss_pred HHH-HHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 395 WLL-PQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 395 wlv-~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
||+ ..-.+.|+||.-.+|...+++.+..|+.
T Consensus 122 wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~ 153 (493)
T KOG1330|consen 122 WQVLLCRGFVGIGEASYSPIAPSLIADSFPDD 153 (493)
T ss_pred HHHHHHHHHhccchhhhcccchhHhhhcCcch
Confidence 655 5778999999999999999999998874
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=52.80 E-value=65 Score=33.25 Aligned_cols=40 Identities=15% Similarity=0.005 Sum_probs=33.2
Q ss_pred hcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHH
Q 037418 22 VWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWML 62 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i 62 (427)
.-|++...|+.+-..-.....+..++.|.++||. .++|..
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~ 334 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLT 334 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHH
Confidence 3588888888888888888899999999999997 666543
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=52.39 E-value=2.1e+02 Score=29.71 Aligned_cols=114 Identities=11% Similarity=-0.039 Sum_probs=56.1
Q ss_pred cCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhhhc--CCCCCCCCchhHHHHHHHHHHHhhc
Q 037418 23 WKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVSYE--YKPECIGEGQKILFYTALGLIAFGM 100 (427)
Q Consensus 23 l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~li~~g~ 100 (427)
+|-+..-...+.+.+.. ..-..++..-|+. |||.....+.++..+.+.. ..+. ....+.......+...+.
T Consensus 348 lg~~~~~~~~~~~~~~~---p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 420 (521)
T KOG0255|consen 348 LGGNIYLNFTLSGLVEL---PAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPD---DLGGWLHWILPLLGKFFI 420 (521)
T ss_pred cCchHHHHHHHHHHHHh---hHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhc---cchhHHHHHHHHHHHHHH
Confidence 45555444444444333 3333457888985 9999999998887762221 1110 111011111111222222
Q ss_pred ccccccccchhcccCCcchhhhhhhhhhHHHHHH--HHHHHHHHHHHhhhhcee
Q 037418 101 SGHLVSIGGFMADQMTDSRAEQVSMRSAKLFFFS--FCGVVLVPIIALIAFPYI 152 (427)
Q Consensus 101 g~~k~~~~~~~~dq~~~~~~~~~~~~~~~~~~f~--Y~~iNiG~~i~~~~~~~l 152 (427)
+.-...+..+.++++++.- |..... -....+|+.+++.+....
T Consensus 421 ~~~~~~~~~~~~el~pt~~---------r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 421 GSAFNLIFLYSAELIPTVV---------RNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHHHHHHHhhccHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222333666777776543 222222 455667777666655433
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=51.99 E-value=2.8e+02 Score=28.39 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=58.0
Q ss_pred CceecccchhhhhhHHHHHHHHHHHHHHhhhhcCCCCCC-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 037418 307 KLSVPLPILLLFYDIARTQFTNLYAKFLNSFGESQSKKY-----APAIGFATSMVLAILCCITAAKVETRRLDVIRSHGL 381 (427)
Q Consensus 307 ~~~ip~~~~~~~n~i~ii~~~pl~~~~~~~~~~~~~~~~-----s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~ 381 (427)
.+.+|.+-+..++ +..+.+.-.+....-|+..+ ++.. +.+.|+..|.+-+++-+..--+. ...|
T Consensus 294 e~Gv~ke~Lal~~-v~~~plqI~l~~~~gk~ta~-~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~--------~~~G- 362 (510)
T KOG3574|consen 294 EHGVPKEELALIA-VPLVPLQIALPLYIGKWTAG-PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLG--------HSDG- 362 (510)
T ss_pred HcCCChhHheeee-eehhhHHHhhhhhheeecCC-CCcchHHHHhhhHHHHHHHHHHHHHhhhcccc--------cCCC-
Confidence 3467777665544 22223333333333344432 1111 34567777777666544332211 1112
Q ss_pred CCCCCCCccchH-HHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCCC
Q 037418 382 IDKPDDKIPMSM-FWLLPQFLLLGGFDGVCEVSIACFFIDQFPPLL 426 (427)
Q Consensus 382 ~~~~~~~~~~s~-~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~m 426 (427)
..+..+ ...+-+|.+.+..---..++++.|.++.||+..
T Consensus 363 ------~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~i 402 (510)
T KOG3574|consen 363 ------TFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAI 402 (510)
T ss_pred ------ceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc
Confidence 344433 345568899999888899999999999998753
No 260
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=49.65 E-value=2.4e+02 Score=29.02 Aligned_cols=101 Identities=15% Similarity=0.089 Sum_probs=70.5
Q ss_pred HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHHHHHHHHHHHhh----hc-CCCCCC-CCchhH
Q 037418 14 VMITYLTNVWKISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWMLLVSSLAYSAVS----YE-YKPECI-GEGQKI 87 (427)
Q Consensus 14 ~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i~~g~~~~~~~~----~~-~~~~~~-~~~~~~ 87 (427)
+++-|+... |++...-+..-+.-..+....+++..++-+|+ |.-|+=+++.......+ .. ..+... ...+..
T Consensus 280 lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~ 357 (432)
T PF06963_consen 280 LMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAY 357 (432)
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHH
Confidence 567777776 99999988888888888889999999998885 99999999987766511 11 111110 123445
Q ss_pred HHHHHHHHHHhhcccccccccchhcccCC
Q 037418 88 LFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 88 ~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
.+..++++-=+|-=++.-++..++=|..+
T Consensus 358 ~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~ 386 (432)
T PF06963_consen 358 LLLGGIALSRIGLWSFDLAVTQIMQENVP 386 (432)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHhhcccCC
Confidence 56666666667777788888777766444
No 261
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=43.50 E-value=2.8e+02 Score=25.88 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHH-HHHhHhhhhhhHHHHHhcCCCC
Q 037418 392 SMFWLLPQFLLL-GGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 392 s~~wlv~~y~l~-~~gEl~~~~~~lef~~~~aP~~ 425 (427)
+.--+.+..+.+ ++.|-++.....++..+..|+.
T Consensus 182 ~~~~~~~~h~~i~~i~Eg~iT~~~~~~l~~~~~~~ 216 (230)
T PRK11909 182 SIPAMLFAHLTVAGIVEAIVTGLVVYYLQKADEEN 216 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 344466667887 9999999999999999885554
No 262
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=38.79 E-value=4.3e+02 Score=27.50 Aligned_cols=183 Identities=14% Similarity=0.113 Sum_probs=0.0
Q ss_pred ChhhHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHHHHHHhh------hHHHHhhhcccchHHHHHHHHHHHHHhh
Q 037418 1 LFWADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWGTVLMLP------LAIQYLVDTIIGNYWMLLVSSLAYSAVS 73 (427)
Q Consensus 1 ~~~~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~~~y~~~------~~GG~laD~~lGr~~~i~~g~~~~~~~~ 73 (427)
+||+=-|+||-+| + .|.+..+..+++.=.--|--...+.| ++=+++++|+ +|+|...+-.......+
T Consensus 15 ~fF~il~~Y~iLR~l-----KD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~~~~F~~~f 88 (472)
T TIGR00769 15 MFFCILFNYTILRDT-----KDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTVISPFLGFF 88 (472)
T ss_pred HHHHHHHHHHHHHhh-----hhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHHHHHHHHHH
Q ss_pred hcCC---CCCCCCc------------------------hhHHHHHHHHHHHhhcccccc-cccchhcccCCcchhhhhhh
Q 037418 74 YEYK---PECIGEG------------------------QKILFYTALGLIAFGMSGHLV-SIGGFMADQMTDSRAEQVSM 125 (427)
Q Consensus 74 ~~~~---~~~~~~~------------------------~~~~~~~~l~li~~g~g~~k~-~~~~~~~dq~~~~~~~~~~~ 125 (427)
.... -+..+.. +.|..-+--+...+=....-+ ---++..|.++.++.++
T Consensus 89 ~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakR--- 165 (472)
T TIGR00769 89 ALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKR--- 165 (472)
T ss_pred HHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH---
Q ss_pred hhhHHHHHH--HHHHHHHHHHHhhhhceec-----------cc----hhHhHHHHHHHHHHHHHHHhcccce--------
Q 037418 126 RSAKLFFFS--FCGVVLVPIIALIAFPYIK-----------PW----KIRFGIPAIFTVVATLVFLSGTCSY-------- 180 (427)
Q Consensus 126 ~~~~~~~f~--Y~~iNiG~~i~~~~~~~l~-----------g~----~~~F~i~~v~~~i~~iif~~~~~~~-------- 180 (427)
+|. ..+-|+|.++|+.+..++. .| ...+.+.++...+.+.++..-.+.-
T Consensus 166 ------fy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 239 (472)
T TIGR00769 166 ------FYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYN 239 (472)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q ss_pred -----eecCCCCChhHHHHHHHH
Q 037418 181 -----RRRKPLGSPLTTVFRVFV 198 (427)
Q Consensus 181 -----~~~~p~g~pl~~~~~v~~ 198 (427)
++.+|+++....+..+..
T Consensus 240 ~~~~~~k~k~k~~~~es~k~i~~ 262 (472)
T TIGR00769 240 PALKEKKVKPKMSTMESLKFLVS 262 (472)
T ss_pred hhhccccCCCCCCHHHHHHHHHh
No 263
>PRK06265 cobalt transport protein CbiM; Validated
Probab=35.02 E-value=3.4e+02 Score=24.50 Aligned_cols=93 Identities=15% Similarity=0.074 Sum_probs=51.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhhcCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCCCccchHHH--
Q 037418 318 FYDIARTQFTNLYAKFLNSFGESQSKKYAPAIGFATSMVLAILCCITAAKVETRRLDVIRSHGLIDKPDDKIPMSMFW-- 395 (427)
Q Consensus 318 ~n~i~ii~~~pl~~~~~~~~~~~~~~~~s~~~ki~iG~~l~~ls~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~s~~w-- 395 (427)
.|.+...+-.++-..+.++..|| .| ..+...|++-..++....+..-.-....+ | ..+....+
T Consensus 102 ~N~l~m~~p~~~~~~~~~~~~~~---~~--~~~~~~~f~~~~l~v~~~~l~~~~~l~l~---~-------~~~~~~~~~~ 166 (199)
T PRK06265 102 VNTLNMALPAVLAGYLFRKLLRR---TP--PPRGLAAFLAGALAVFLAALLCALELALS---G-------GFPFVPAAKL 166 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh---cc--chHHHHHHHHHHHHHHHHHHHHHHHHHHc---c-------cccHHHHHHH
Confidence 34544444445555555565554 12 25666677777777665544332111111 1 01112222
Q ss_pred HHHHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 396 LLPQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 396 lv~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
+++.++.+++.|.++......+..+.-|+-
T Consensus 167 ~~~~~~~l~~~Eg~ltg~~v~~l~~~rP~~ 196 (199)
T PRK06265 167 LGLAHLPLMVIEGIITAFAVSFLARVRPEL 196 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHh
Confidence 324456667779999999999999988873
No 264
>TIGR00123 cbiM cobalamin biosynthesis protein CbiM. In Methanobacterium thermoautotrophicum, Archaeoglobus fulgidus, and Methanococcus jannaschii, a second homolog of cbiM is also found. These cbiM-related proteins appear to represent a distinct but less well-conserved orthologous group. Still more distant homologs include sll0383 from Synechocystis sp. and HI1621 from Haemophilus influenzae; the latter protein, from a species that does not synthesize cobalamin, is the most divergent member of the group. The functions of and relationships among the set of proteins homologous to cbiM have not been determined.
Probab=32.44 E-value=3.2e+02 Score=25.14 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 395 WLLPQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 395 wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
...+.++.+++.|-.+......|..+..|+-
T Consensus 181 ~~~~~h~~~~i~Eg~iT~~~~~~l~~~~p~~ 211 (214)
T TIGR00123 181 IFAYTQVPLAIAEGLLTVMIYDYITKLRPDT 211 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHh
Confidence 3445567889999999999999999999974
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.42 E-value=1e+02 Score=33.94 Aligned_cols=68 Identities=9% Similarity=-0.014 Sum_probs=54.1
Q ss_pred hHHHHHHhHH-HHHHHhhHhcCCchHHHHHHHHHHHH-HHHHhhhHHHHhhhcc-cchHHHHHHHHHHHHH
Q 037418 4 ADIFAAYAMW-VMITYLTNVWKISLVRAAAIVNFFWG-TVLMLPLAIQYLVDTI-IGNYWMLLVSSLAYSA 71 (427)
Q Consensus 4 ~eRfs~Yg~~-~l~~yl~~~l~~~~~~A~~~~~~~~~-~~y~~~~~GG~laD~~-lGr~~~i~~g~~~~~~ 71 (427)
.|-..+-|+. -+-=||.+++|.+...|+.+.+.... ..-+..++||++--|+ ++-|.++.+..+..++
T Consensus 403 ~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 403 IESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 5777888888 88899999999999999999987766 4457788999999887 6666666666555544
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=32.31 E-value=2.9e+02 Score=26.89 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=63.3
Q ss_pred HhhhHHHHhhhcccchHH-------HHHHHHHHHHHhhhcCC---CCCCCCchhHHHHHHHHHHHhhcccccccccchhc
Q 037418 43 MLPLAIQYLVDTIIGNYW-------MLLVSSLAYSAVSYEYK---PECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMA 112 (427)
Q Consensus 43 ~~~~~GG~laD~~lGr~~-------~i~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~ 112 (427)
+.+++|.-++.|.+.|.+ .|........+.+|.+. .+. ..++..-+++..++-...|.+.|.+.-+=
T Consensus 293 lASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~--kes~~~s~i~F~~~E~cvGlfwPSimkmR- 369 (454)
T KOG4332|consen 293 LASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPS--KESPSESLIGFCLFEACVGLFWPSIMKMR- 369 (454)
T ss_pred HHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCC--cCCchHHHHHHHHHHHHHhhcchHHHHHH-
Confidence 445666667766655432 23222222222344332 111 22344456788888888999999987665
Q ss_pred ccCCcchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhceec------cchhHhHHHHHHHHHHHHH
Q 037418 113 DQMTDSRAEQVSMRSAKLFFFSFCGVVLVPIIALIAFPYIK------PWKIRFGIPAIFTVVATLV 172 (427)
Q Consensus 113 dq~~~~~~~~~~~~~~~~~~f~Y~~iNiG~~i~~~~~~~l~------g~~~~F~i~~v~~~i~~ii 172 (427)
.||.+++. ++...|++=+-+-.++...+-. ++ +-+..|++|.+.+.++.+.
T Consensus 370 sqyIPEea--------rstimNfFRvPLnifvClvLyn-lh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 370 SQYIPEEA--------RSTIMNFFRVPLNIFVCLVLYN-LHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HhhCCHHH--------HhhhhhheechhhHhhhhhhee-cccccCccccchhhhhhHHHHHHHHHH
Confidence 55655443 3445553333333333211111 11 4556799999988887644
No 267
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.71 E-value=93 Score=24.57 Aligned_cols=52 Identities=19% Similarity=0.013 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhceeccchhHhHHHHHHHHHHHHHHHhcccceee
Q 037418 130 LFFFSFCGVVLVPIIALIAFPYIKPWKIRFGIPAIFTVVATLVFLSGTCSYRR 182 (427)
Q Consensus 130 ~~~f~Y~~iNiG~~i~~~~~~~l~g~~~~F~i~~v~~~i~~iif~~~~~~~~~ 182 (427)
++++ -..+.+|+.+|.+.+-+.|.+.+.-.+-.++.++.+++-+--.++|++
T Consensus 25 Er~~-q~ilti~aiVg~i~Gf~~Qqls~tvy~vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 25 ERFQ-QLILTIGAIVGFIYGFAQQQLSVTVYIVGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhc
Confidence 5566 477889999987665555544444444455555666666666666654
No 268
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=31.62 E-value=1.4e+02 Score=20.72 Aligned_cols=30 Identities=10% Similarity=0.186 Sum_probs=19.2
Q ss_pred HHHHHHHhhhHHHHhhhcccchHHHHHHHH
Q 037418 37 FWGTVLMLPLAIQYLVDTIIGNYWMLLVSS 66 (427)
Q Consensus 37 ~~~~~y~~~~~GG~laD~~lGr~~~i~~g~ 66 (427)
......+.....|+..|+++|..+...+..
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g 38 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIG 38 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 334445556677999999999854444333
No 269
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=29.47 E-value=6.8e+02 Score=26.21 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=56.2
Q ss_pred HHHHHhhHhc-----CCchHHHHHHHHHHHHHHHHhhhHHHHhhhcccchHH------HHHHHHHHHHHh-----hhcCC
Q 037418 14 VMITYLTNVW-----KISLVRAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW------MLLVSSLAYSAV-----SYEYK 77 (427)
Q Consensus 14 ~l~~yl~~~l-----~~~~~~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~------~i~~g~~~~~~~-----~~~~~ 77 (427)
.+.+|-.+.. |++ -.++...+....+..++.++-+++=.+.-.|+| -..+|.++..+. +....
T Consensus 290 sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~ 368 (493)
T PRK15462 290 SISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARW 368 (493)
T ss_pred HHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5667766543 322 224444455555445444444566444312121 245566555551 11111
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccccccccchhcccCC
Q 037418 78 PECIGEGQKILFYTALGLIAFGMSGHLVSIGGFMADQMT 116 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~ 116 (427)
.......+.+.+..+..+..+|.=++.|.-.+++++.-+
T Consensus 369 ~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP 407 (493)
T PRK15462 369 SAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI 407 (493)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh
Confidence 110112455567788889999999999999999999743
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.33 E-value=7.2e+02 Score=25.82 Aligned_cols=96 Identities=16% Similarity=-0.018 Sum_probs=52.0
Q ss_pred hcCCchHHHHHHHHHHHHHH-HHhhhHHHHhhhcc--cchHHHHHHHHHHHHHh-hh-cCC-CCC------C-----CCc
Q 037418 22 VWKISLVRAAAIVNFFWGTV-LMLPLAIQYLVDTI--IGNYWMLLVSSLAYSAV-SY-EYK-PEC------I-----GEG 84 (427)
Q Consensus 22 ~l~~~~~~A~~~~~~~~~~~-y~~~~~GG~laD~~--lGr~~~i~~g~~~~~~~-~~-~~~-~~~------~-----~~~ 84 (427)
.++.++..--.+.+...+.. ++..+.-+.+.+|. +||+.++.++..+..+. ++ .+. |.. . ...
T Consensus 272 ~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 272 KLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 44444444433333333322 22233334445433 57888999998887761 11 111 100 0 012
Q ss_pred hhHHHHHHHHHHHhhcccccccccchhcccCCc
Q 037418 85 QKILFYTALGLIAFGMSGHLVSIGGFMADQMTD 117 (427)
Q Consensus 85 ~~~~~~~~l~li~~g~g~~k~~~~~~~~dq~~~ 117 (427)
+.....+--.+.++|-+.+....+..+++.+++
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~ 384 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIALLYPD 384 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC
Confidence 222333344568889999999999999999843
No 271
>PRK08319 cobalt transport protein CbiM; Validated
Probab=26.25 E-value=5.2e+02 Score=23.85 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhHhhhhhhHHHHHhcCCC
Q 037418 397 LPQFLLLGGFDGVCEVSIACFFIDQFPP 424 (427)
Q Consensus 397 v~~y~l~~~gEl~~~~~~lef~~~~aP~ 424 (427)
.++++.+++.|.++.-....+..+.-|+
T Consensus 183 ~~~~l~l~~~Eg~itg~~v~~l~~~rP~ 210 (224)
T PRK08319 183 AVTQIPLAIAEGLLTVLIFNYLTKYRPD 210 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHH
Confidence 4666889999999999999999988886
No 272
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=26.18 E-value=6.1e+02 Score=27.37 Aligned_cols=68 Identities=10% Similarity=0.019 Sum_probs=35.0
Q ss_pred hhHHHHHHhHH-HHHHHhhHhcCCchH---HHHHHHHHHHHHHHHhhhHHHHhhhcccchHHHH-HHHHHHHHH
Q 037418 3 WADIFAAYAMW-VMITYLTNVWKISLV---RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYWML-LVSSLAYSA 71 (427)
Q Consensus 3 ~~eRfs~Yg~~-~l~~yl~~~l~~~~~---~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~~i-~~g~~~~~~ 71 (427)
|.+-.-||++. .......+.++-+.. .++.+...+.....+..++.|++.-+ +||.|-. ++++.++.+
T Consensus 320 fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~~~~~ta 392 (599)
T PF06609_consen 320 FISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFGSVLMTA 392 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHHHHHHHH
Confidence 34555567665 443333333444332 34444444444445556666777754 5776655 455555544
No 273
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=24.25 E-value=6.6e+02 Score=26.50 Aligned_cols=33 Identities=9% Similarity=0.131 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhcCCCC
Q 037418 392 SMFWLLPQFLLLGGFDGVCEVSIACFFIDQFPPL 425 (427)
Q Consensus 392 s~~wlv~~y~l~~~gEl~~~~~~lef~~~~aP~~ 425 (427)
|.+.+...-++.|++|.... +....+++-.|++
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k 146 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS 146 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH
Confidence 45667777799999999999 9999999888864
No 274
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.21 E-value=2.2e+02 Score=23.24 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhcccchHH
Q 037418 29 RAAAIVNFFWGTVLMLPLAIQYLVDTIIGNYW 60 (427)
Q Consensus 29 ~A~~~~~~~~~~~y~~~~~GG~laD~~lGr~~ 60 (427)
++-.+..=|.+...+...+ ||+-|++.|-..
T Consensus 44 ~a~klssefIsGilVGa~i-G~llD~~agTsP 74 (116)
T COG5336 44 QAFKLSSEFISGILVGAGI-GWLLDKFAGTSP 74 (116)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHhcCCCc
Confidence 3444455555555555555 888898866543
Done!