Your job contains 1 sequence.
>037419
MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE
ILEIHEFSSNNNNIIEGHQEQLLQDQRPQNQVMSSWNLISKQNPCATYVT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037419
(110 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006377 - symbol:AT3G25855 species:3702 "Ara... 204 1.8e-16 1
TAIR|locus:4515103273 - symbol:AT3G56891 species:3702 "Ar... 94 2.4e-08 2
TAIR|locus:2089870 - symbol:AT3G21490 "AT3G21490" species... 113 7.8e-07 1
TAIR|locus:2131561 - symbol:HIPP25 "heavy metal associate... 110 1.6e-06 1
TAIR|locus:2121199 - symbol:FP6 "farnesylated protein 6" ... 107 3.4e-06 1
TAIR|locus:2026336 - symbol:HIPP20 "heavy metal associate... 101 1.5e-05 1
TAIR|locus:2202265 - symbol:AT1G06330 "AT1G06330" species... 98 3.0e-05 1
TAIR|locus:2179604 - symbol:AT5G19090 species:3702 "Arabi... 108 3.5e-05 1
TAIR|locus:2142614 - symbol:AT5G03380 species:3702 "Arabi... 92 3.6e-05 2
TAIR|locus:2157457 - symbol:HIPP21 "heavy metal associate... 97 3.9e-05 1
TAIR|locus:2017759 - symbol:HIPP22 "heavy metal associate... 97 3.9e-05 1
TAIR|locus:2075497 - symbol:AT3G02960 "AT3G02960" species... 101 4.8e-05 1
TAIR|locus:4010713945 - symbol:AT5G05365 species:3702 "Ar... 95 6.3e-05 1
TAIR|locus:2153969 - symbol:AT5G24580 "AT5G24580" species... 101 8.0e-05 1
TAIR|locus:2133544 - symbol:AT4G08570 "AT4G08570" species... 93 0.00010 1
TAIR|locus:2135277 - symbol:AT4G39700 species:3702 "Arabi... 93 0.00010 1
TAIR|locus:2156927 - symbol:HIPP27 "heavy metal associate... 92 0.00013 1
TAIR|locus:2153794 - symbol:AT5G37860 "AT5G37860" species... 97 0.00015 1
TAIR|locus:4010713877 - symbol:AT4G10465 species:3702 "Ar... 92 0.00023 1
TAIR|locus:2167366 - symbol:FP3 "farnesylated protein 3" ... 97 0.00026 1
TAIR|locus:2029914 - symbol:AT1G29100 "AT1G29100" species... 89 0.00027 1
TAIR|locus:2180265 - symbol:AT5G27690 species:3702 "Arabi... 95 0.00042 1
TAIR|locus:2205288 - symbol:ATX1 "homolog of anti-oxidant... 86 0.00057 1
>TAIR|locus:505006377 [details] [associations]
symbol:AT3G25855 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AY087131 EMBL:BT024674
IPI:IPI00548861 RefSeq:NP_566781.1 UniGene:At.37315
ProteinModelPortal:Q8LBL7 EnsemblPlants:AT3G25855.1 GeneID:822180
KEGG:ath:AT3G25855 TAIR:At3g25855 eggNOG:NOG326579
HOGENOM:HOG000077489 InParanoid:Q8LBL7 OMA:INLDCNA PhylomeDB:Q8LBL7
ProtClustDB:CLSN2688781 Genevestigator:Q8LBL7 Uniprot:Q8LBL7
Length = 112
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 38/86 (44%), Positives = 61/86 (70%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
MRIN+DCN C RK RR +++M+E+++H+I KK +V + G F P D+A+K+++K RRVE
Sbjct: 11 MRINLDCNACCRKARRIIINMKEVDTHMINKKERQVILCGRFRPSDVALKLQRKMKRRVE 70
Query: 61 ILEIHEFSSNNNNIIEGHQEQLLQDQ 86
ILE+ + + N + EG + +L +Q
Sbjct: 71 ILEVEDLT-NGHGGEEGSEHELPYEQ 95
>TAIR|locus:4515103273 [details] [associations]
symbol:AT3G56891 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006121 InterPro:IPR017969 Pfam:PF00403
PROSITE:PS01047 PROSITE:PS50846 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 EMBL:AL390921 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000234967 IPI:IPI00892115
RefSeq:NP_001118849.1 UniGene:At.73562 ProteinModelPortal:B3H6D0
SMR:B3H6D0 EnsemblPlants:AT3G56891.1 GeneID:6240272
KEGG:ath:AT3G56891 TAIR:At3g56891 eggNOG:NOG278834 OMA:DSEYYPY
PhylomeDB:B3H6D0 ProtClustDB:CLSN2925550 Genevestigator:B3H6D0
Uniprot:B3H6D0
Length = 166
Score = 94 (38.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 18/58 (31%), Positives = 38/58 (65%)
Query: 3 INIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++DC GC +KVRRA+ + +++ I+ +V+V+G ++ ++ +K+ K+T R E
Sbjct: 22 VDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTG-YVDREEVLKMVKRTGRTAE 78
Score = 46 (21.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 58 RVEILEIHEFSSNNNNIIEGHQEQLLQDQRPQNQVMSSWNLISKQN 103
+ + ++ +F + NN+ I G+ Q +P N ++ +L S N
Sbjct: 115 KYDFYDVDDFQNTNNSTINGYYPSSSQKVQP-NIDENALHLFSDDN 159
>TAIR|locus:2089870 [details] [associations]
symbol:AT3G21490 "AT3G21490" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000234967 EMBL:BT029335 IPI:IPI00521665
RefSeq:NP_188786.1 UniGene:At.27992 UniGene:At.66562
ProteinModelPortal:A0JPW5 SMR:A0JPW5 IntAct:A0JPW5
EnsemblPlants:AT3G21490.1 GeneID:821703 KEGG:ath:AT3G21490
TAIR:At3g21490 eggNOG:NOG246289 InParanoid:A0JPW5 OMA:VEIVASK
ProtClustDB:CLSN2685242 Genevestigator:A0JPW5 Uniprot:A0JPW5
Length = 136
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 3 INIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62
+++ CN C RK+ R + + +E+ + + +V V G P L K++KKT +RV+I+
Sbjct: 20 VSMHCNDCERKIARVISKFKGVETFVTDMINHKVVVRGKIDPNKLLKKLKKKTGKRVKIV 79
Query: 63 ----EIHEFSSNNNNIIEGHQEQL-LQDQ 86
+ E S N N++E E + L DQ
Sbjct: 80 VKEEKGEESSKENENVLEIDMESICLGDQ 108
>TAIR|locus:2131561 [details] [associations]
symbol:HIPP25 "heavy metal associated isoprenylated plant
protein 25" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA;ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR006121
Pfam:PF00403 PROSITE:PS50846 GO:GO:0009506 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 EMBL:AL022023 EMBL:AL161586
GO:GO:0030001 SUPFAM:SSF55008 HOGENOM:HOG000234967 EMBL:AY086639
EMBL:BT024822 IPI:IPI00538752 PIR:T05776 RefSeq:NP_567975.1
UniGene:At.31450 ProteinModelPortal:O49613 SMR:O49613 PaxDb:O49613
PRIDE:O49613 DNASU:829658 EnsemblPlants:AT4G35060.1 GeneID:829658
KEGG:ath:AT4G35060 TAIR:At4g35060 eggNOG:NOG317525
InParanoid:O49613 OMA:DENASAC PhylomeDB:O49613
ProtClustDB:CLSN2917669 ArrayExpress:O49613 Genevestigator:O49613
Uniprot:O49613
Length = 153
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+R+ IDC GC RKVRRAL M+ + IE +V+V G P + +I +T +R E
Sbjct: 29 VRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAE 88
Query: 61 I 61
+
Sbjct: 89 L 89
>TAIR|locus:2121199 [details] [associations]
symbol:FP6 "farnesylated protein 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0030001 "metal ion transport" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA;ISS] [GO:0010286 "heat acclimation"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR006121 Pfam:PF00403
PROSITE:PS01047 PROSITE:PS50846 GO:GO:0005886 GO:GO:0009506
EMBL:CP002687 GO:GO:0046872 GO:GO:0031965 GO:GO:0030001
SUPFAM:SSF55008 EMBL:AL161593 GO:GO:0010286 EMBL:AL035540
EMBL:AF324677 EMBL:AF326881 EMBL:AF339701 EMBL:AF380660
EMBL:AY056095 EMBL:AY084288 EMBL:U64909 IPI:IPI00524338 PIR:T05686
RefSeq:NP_195570.1 UniGene:At.21139 UniGene:At.69396
ProteinModelPortal:Q9SZN7 SMR:Q9SZN7 IntAct:Q9SZN7 STRING:Q9SZN7
PRIDE:Q9SZN7 EnsemblPlants:AT4G38580.1 GeneID:830015
KEGG:ath:AT4G38580 TAIR:At4g38580 eggNOG:NOG238782
HOGENOM:HOG000234967 InParanoid:Q9SZN7 OMA:GMKGVSS PhylomeDB:Q9SZN7
ProtClustDB:CLSN2915853 Genevestigator:Q9SZN7 Uniprot:Q9SZN7
Length = 153
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC GC RKVRR++ M+ + S +E K +V+V G P + ++ +T ++VE
Sbjct: 30 IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVE 89
Query: 61 I 61
+
Sbjct: 90 L 90
>TAIR|locus:2026336 [details] [associations]
symbol:HIPP20 "heavy metal associated isoprenylated plant
protein 20" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA;ISS]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC016972 GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000234967 ProtClustDB:CLSN2681862
EMBL:AY087875 EMBL:BT003666 EMBL:AK117880 IPI:IPI00534980
PIR:H96734 RefSeq:NP_177261.1 UniGene:At.35237 UniGene:At.74076
ProteinModelPortal:Q9C9A3 SMR:Q9C9A3 IntAct:Q9C9A3
EnsemblPlants:AT1G71050.1 GeneID:843445 KEGG:ath:AT1G71050
TAIR:At1g71050 eggNOG:NOG308209 InParanoid:Q9C9A3 OMA:GYVKNVV
PhylomeDB:Q9C9A3 Genevestigator:Q9C9A3 Uniprot:Q9C9A3
Length = 152
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 19/61 (31%), Positives = 42/61 (68%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC+GC R+V+ A+ M+ ++S + +K+ +V+VSG P+ + +I ++T ++ E
Sbjct: 32 IKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRI-ERTGKKAE 90
Query: 61 I 61
I
Sbjct: 91 I 91
>TAIR|locus:2202265 [details] [associations]
symbol:AT1G06330 "AT1G06330" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002684
GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008 IPI:IPI00524778
RefSeq:NP_172122.1 UniGene:At.51504 ProteinModelPortal:F4IC29
SMR:F4IC29 EnsemblPlants:AT1G06330.1 GeneID:837144
KEGG:ath:AT1G06330 OMA:LPYNPEH Uniprot:F4IC29
Length = 159
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/64 (32%), Positives = 40/64 (62%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
MR+++DC GC +V+ AL M+ +++ I+ +V+V+G + Q +K +KT RR E
Sbjct: 15 MRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTG-YADQKKVLKKVRKTGRRAE 73
Query: 61 ILEI 64
+ ++
Sbjct: 74 LWQL 77
>TAIR|locus:2179604 [details] [associations]
symbol:AT5G19090 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR006121
Pfam:PF00403 PROSITE:PS50846 GO:GO:0009506 EMBL:CP002688
GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008 IPI:IPI00516625
RefSeq:NP_197410.1 UniGene:At.31334 ProteinModelPortal:F4JZL7
SMR:F4JZL7 PRIDE:F4JZL7 EnsemblPlants:AT5G19090.1 GeneID:832028
KEGG:ath:AT5G19090 OMA:YFNDENT Uniprot:F4JZL7
Length = 587
Score = 108 (43.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++NI C+GC +KV++ L ++ + + I+ ++ +V+VSGN P L IK K+ + E
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVL-IKKLLKSGKHAE 72
Query: 61 ILEIHEFSSNNN 72
I + SNNN
Sbjct: 73 IWGAPKGGSNNN 84
>TAIR|locus:2142614 [details] [associations]
symbol:AT5G03380 species:3702 "Arabidopsis thaliana"
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL162751 GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000239741 EMBL:AY058875 EMBL:AF517549
EMBL:AY103305 IPI:IPI00545746 PIR:T48360 RefSeq:NP_195958.1
UniGene:At.19989 ProteinModelPortal:Q9LZF1 SMR:Q9LZF1 STRING:Q9LZF1
PRIDE:Q9LZF1 EnsemblPlants:AT5G03380.1 GeneID:831854
KEGG:ath:AT5G03380 TAIR:At5g03380 eggNOG:NOG253447
InParanoid:Q9LZF1 OMA:DKEKGGG PhylomeDB:Q9LZF1
ProtClustDB:CLSN2687562 Genevestigator:Q9LZF1 Uniprot:Q9LZF1
Length = 392
Score = 92 (37.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 18/62 (29%), Positives = 36/62 (58%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
M++++ C GC +K++R + +E I+ K +++V GN P ++ K+ K R VE
Sbjct: 28 MKLDMHCEGCGKKIKRIFKHFKGVEDVKIDYKSNKLTVIGNVDPVEVRDKVADKIKRPVE 87
Query: 61 IL 62
++
Sbjct: 88 LV 89
Score = 33 (16.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 75 IEGHQEQLLQDQRPQNQVMSSWN 97
+ G Q ++Q Q Q+ V ++
Sbjct: 313 VYGQQHYMMQGQSSQSYVQEPYS 335
>TAIR|locus:2157457 [details] [associations]
symbol:HIPP21 "heavy metal associated isoprenylated plant
protein 21" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA;IGI] [GO:0046872 "metal ion binding" evidence=IEA;ISS]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002688
GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008 EMBL:AL391150
HOGENOM:HOG000234967 EMBL:BT029323 IPI:IPI00548540 PIR:T51471
RefSeq:NP_197247.1 UniGene:At.49419 ProteinModelPortal:Q9LF57
SMR:Q9LF57 IntAct:Q9LF57 EnsemblPlants:AT5G17450.1 GeneID:831611
KEGG:ath:AT5G17450 TAIR:At5g17450 InParanoid:Q9LF57 OMA:RSKRKPM
PhylomeDB:Q9LF57 ProtClustDB:CLSN2914882 Genevestigator:Q9LF57
Uniprot:Q9LF57
Length = 149
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC+GC R+VR + M+ ++S + +K R++V+G+ P + ++ K T ++ E
Sbjct: 30 IKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRV-KSTGKKAE 88
>TAIR|locus:2017759 [details] [associations]
symbol:HIPP22 "heavy metal associated isoprenylated plant
protein 22" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA;ISS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=RCA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR006121 Pfam:PF00403
PROSITE:PS50846 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008 HOGENOM:HOG000234967
EMBL:AF370526 EMBL:AY052659 EMBL:AF446887 EMBL:AY072474
IPI:IPI00545092 RefSeq:NP_173712.1 UniGene:At.20068
ProteinModelPortal:Q93VP2 SMR:Q93VP2 IntAct:Q93VP2
EnsemblPlants:AT1G22990.1 GeneID:838907 KEGG:ath:AT1G22990
TAIR:At1g22990 eggNOG:NOG243423 InParanoid:Q93VP2 OMA:CERKIKN
PhylomeDB:Q93VP2 ProtClustDB:CLSN2681862 Genevestigator:Q93VP2
Uniprot:Q93VP2
Length = 152
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 17/61 (27%), Positives = 38/61 (62%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ IDC+GC RK++ A+ ++ +S + +KM +V+VSG P+ + ++ ++ E
Sbjct: 33 IKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAE 92
Query: 61 I 61
+
Sbjct: 93 L 93
>TAIR|locus:2075497 [details] [associations]
symbol:AT3G02960 "AT3G02960" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 EMBL:AC018363 HOGENOM:HOG000239741 IPI:IPI00546328
RefSeq:NP_186946.1 UniGene:At.53164 ProteinModelPortal:Q9M8T7
SMR:Q9M8T7 PaxDb:Q9M8T7 PRIDE:Q9M8T7 EnsemblPlants:AT3G02960.1
GeneID:821172 KEGG:ath:AT3G02960 TAIR:At3g02960 eggNOG:NOG81659
InParanoid:Q9M8T7 OMA:LKMNMHC PhylomeDB:Q9M8T7
ProtClustDB:CLSN2915735 Genevestigator:Q9M8T7 Uniprot:Q9M8T7
Length = 246
Score = 101 (40.6 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+R+N+ C GC +++R + ++ ++S ++ V V G P L KI+KK + E
Sbjct: 130 LRMNMHCEGCVHEIKRGIEKIKGIQSVEPDRSKSTVVVRGVMDPPKLVEKIKKKLGKHAE 189
Query: 61 IL-EIHEFSSNNNNIIEGHQEQ 81
+L +I E +NN +E+
Sbjct: 190 LLSQITEKGKDNNKKNNNKKEE 211
>TAIR|locus:4010713945 [details] [associations]
symbol:AT5G05365 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000038877 EMBL:AK220937 EMBL:AK220612
IPI:IPI00570350 RefSeq:NP_001078533.1 UniGene:At.33005
UniGene:At.67825 ProteinModelPortal:Q56ZM7 SMR:Q56ZM7 PaxDb:Q56ZM7
PRIDE:Q56ZM7 EnsemblPlants:AT5G05365.1 GeneID:5008200
KEGG:ath:AT5G05365 TAIR:At5g05365 eggNOG:NOG258095 OMA:YHLETEI
PhylomeDB:Q56ZM7 ProtClustDB:CLSN2691992 Genevestigator:Q56ZM7
Uniprot:Q56ZM7
Length = 77
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 13/57 (22%), Positives = 41/57 (71%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNR 57
+++N+ C+ C RK+ +A+ ++++E++ ++ ++ +V+V+GN + ++ I++ +K +
Sbjct: 7 LKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGN-VTEEQVIRVLQKVRK 62
>TAIR|locus:2153969 [details] [associations]
symbol:AT5G24580 "AT5G24580" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002688
GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008 EMBL:AB010068
EMBL:AY072071 EMBL:AY133835 IPI:IPI00534893 RefSeq:NP_568449.1
UniGene:At.30953 ProteinModelPortal:Q9FLU5 SMR:Q9FLU5 PRIDE:Q9FLU5
EnsemblPlants:AT5G24580.1 GeneID:832529 KEGG:ath:AT5G24580
TAIR:At5g24580 InParanoid:Q9FLU5 OMA:PQAVCNK PhylomeDB:Q9FLU5
ProtClustDB:CLSN2689859 ArrayExpress:Q9FLU5 Genevestigator:Q9FLU5
Uniprot:Q9FLU5
Length = 319
Score = 101 (40.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 18/60 (30%), Positives = 38/60 (63%)
Query: 3 INIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62
+++ C GC +K+ R++L ++ +E +++ +V++ G PQ + KI+KKT R ++L
Sbjct: 62 VDLHCVGCAKKIERSILKIRGVEEVVMDMNENQVTIKGVLDPQAVCNKIKKKTKRMAKVL 121
>TAIR|locus:2133544 [details] [associations]
symbol:AT4G08570 "AT4G08570" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0030001
"metal ion transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA;ISS] InterPro:IPR006121 InterPro:IPR017969
Pfam:PF00403 PROSITE:PS01047 PROSITE:PS50846 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 EMBL:AF076275 HOGENOM:HOG000234967 EMBL:AL161512
EMBL:AY070406 EMBL:AY096585 EMBL:AK226467 IPI:IPI00537356
PIR:T01827 RefSeq:NP_192597.1 UniGene:At.28367 HSSP:P04129
ProteinModelPortal:O81464 SMR:O81464 IntAct:O81464
EnsemblPlants:AT4G08570.1 GeneID:826418 KEGG:ath:AT4G08570
TAIR:At4g08570 eggNOG:NOG294312 InParanoid:O81464 OMA:VARIDCE
PhylomeDB:O81464 ProtClustDB:CLSN2685977 Genevestigator:O81464
Uniprot:O81464
Length = 150
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 1 MRI-NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRV 59
+R+ IDC GC RK++ L ++ ++S ++ K+ +V+V+G P+ + ++ K T ++V
Sbjct: 30 LRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKV-LEAAKSTKKKV 88
Query: 60 EI 61
E+
Sbjct: 89 EL 90
>TAIR|locus:2135277 [details] [associations]
symbol:AT4G39700 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 EMBL:AL022605
EMBL:AL161595 GO:GO:0030001 SUPFAM:SSF55008 HOGENOM:HOG000234967
IPI:IPI00536497 PIR:T05007 RefSeq:NP_195680.1 UniGene:At.54657
ProteinModelPortal:O65657 SMR:O65657 IntAct:O65657
EnsemblPlants:AT4G39700.1 GeneID:830125 KEGG:ath:AT4G39700
TAIR:At4g39700 eggNOG:NOG312486 InParanoid:O65657 OMA:INRKQYK
PhylomeDB:O65657 ProtClustDB:CLSN2916078 Genevestigator:O65657
Uniprot:O65657
Length = 158
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC+GC K++ +L ++ +++ I KK +V+VSG + +K K T ++ E
Sbjct: 36 LKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSG-YADASKVLKKAKATGKKAE 94
Query: 61 I 61
I
Sbjct: 95 I 95
>TAIR|locus:2156927 [details] [associations]
symbol:HIPP27 "heavy metal associated isoprenylated plant
protein 27" species:3702 "Arabidopsis thaliana" [GO:0005737
"cytoplasm" evidence=ISM] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR006121
Pfam:PF00403 PROSITE:PS50846 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000234967 EMBL:AK175898 EMBL:AK176006
IPI:IPI00525836 RefSeq:NP_201412.2 UniGene:At.28881
ProteinModelPortal:Q67ZW1 SMR:Q67ZW1 IntAct:Q67ZW1 PaxDb:Q67ZW1
PRIDE:Q67ZW1 DNASU:836743 EnsemblPlants:AT5G66110.1 GeneID:836743
KEGG:ath:AT5G66110 TAIR:At5g66110 eggNOG:NOG252302
InParanoid:Q67ZW1 OMA:VVPHPYA PhylomeDB:Q67ZW1
ProtClustDB:CLSN2918890 ArrayExpress:Q67ZW1 Genevestigator:Q67ZW1
Uniprot:Q67ZW1
Length = 147
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 14/61 (22%), Positives = 36/61 (59%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC GC R+VR+++ M+ + ++ K +++V G P + ++ +T ++ E
Sbjct: 23 IKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKKAE 82
Query: 61 I 61
+
Sbjct: 83 L 83
>TAIR|locus:2153794 [details] [associations]
symbol:AT5G37860 "AT5G37860" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 EMBL:DQ056698 IPI:IPI00548631 RefSeq:NP_198602.1
UniGene:At.55197 ProteinModelPortal:Q4PSD8 SMR:Q4PSD8
EnsemblPlants:AT5G37860.1 GeneID:833764 KEGG:ath:AT5G37860
TAIR:At5g37860 eggNOG:NOG243933 HOGENOM:HOG000136004 OMA:HEQFSSR
ProtClustDB:CLSN2916563 ArrayExpress:Q4PSD8 Genevestigator:Q4PSD8
Uniprot:Q4PSD8
Length = 262
Score = 97 (39.2 bits), Expect = 0.00015, P = 0.00015
Identities = 27/108 (25%), Positives = 51/108 (47%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++NI+C GC KV++ L ++ + S I+ V V GN P+ L K+ K+ + +
Sbjct: 14 LKVNINCQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEILVKKLNKR-GKHAQ 72
Query: 61 ILEIHEFSSNNNNIIEGHQEQLLQDQRPQNQVMSSWNLISKQNPCATY 108
++ + + + + HQ L D R + +N S N +Y
Sbjct: 73 LMFLTPY--HKDQYFGNHQAVLNHDNRSLGN--TQYNFGSNHNNVPSY 116
>TAIR|locus:4010713877 [details] [associations]
symbol:AT4G10465 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0030001 "metal
ion transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846
EMBL:CP002687 GO:GO:0046872 GO:GO:0030001 SUPFAM:SSF55008
IPI:IPI00775564 RefSeq:NP_001078368.1 UniGene:At.68365
ProteinModelPortal:F4JMB8 SMR:F4JMB8 EnsemblPlants:AT4G10465.1
GeneID:5008132 KEGG:ath:AT4G10465 OMA:PEPPLYF Uniprot:F4JMB8
Length = 183
Score = 92 (37.4 bits), Expect = 0.00023, P = 0.00023
Identities = 21/84 (25%), Positives = 46/84 (54%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ + C GC R VR A+ ++ ++S ++K++ RV V G ++ ++ +K ++ +R E
Sbjct: 55 LKVRMCCTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVG-YVDRNKVLKAVRRAGKRAE 113
Query: 61 ILEIHE----FSSNNNNIIEGHQE 80
E F+S N ++ +E
Sbjct: 114 FSPYPEPPLYFTSTQNYFVDPSKE 137
>TAIR|locus:2167366 [details] [associations]
symbol:FP3 "farnesylated protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0030001 "metal ion transport" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA;ISS] [GO:0046914 "transition metal ion
binding" evidence=IDA] [GO:0046916 "cellular transition metal ion
homeostasis" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046914 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000239741 ProtClustDB:CLSN2702262
EMBL:AF360327 EMBL:AY056337 IPI:IPI00517408 RefSeq:NP_568974.1
UniGene:At.10973 ProteinModelPortal:Q9C5D3 SMR:Q9C5D3 PRIDE:Q9C5D3
EnsemblPlants:AT5G63530.1 GeneID:836472 KEGG:ath:AT5G63530
TAIR:At5g63530 InParanoid:Q9C5D3 OMA:ACATEIK PhylomeDB:Q9C5D3
ArrayExpress:Q9C5D3 Genevestigator:Q9C5D3 GO:GO:0046916
Uniprot:Q9C5D3
Length = 355
Score = 97 (39.2 bits), Expect = 0.00026, P = 0.00026
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFI-PQDLAIKIRKKTNRRV 59
+++ + C GC RKVRR L + +E + + K +V V G P + ++++KT+R+V
Sbjct: 77 LKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKTGKVVVKGEKADPLKVLARVQRKTHRQV 136
Query: 60 EIL 62
++L
Sbjct: 137 QLL 139
Score = 93 (37.8 bits), Expect = 0.00070, P = 0.00070
Identities = 17/64 (26%), Positives = 38/64 (59%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++++ C C ++++ ++ M+ +ES + K +V+V G F PQ L + K+T +
Sbjct: 175 LKVHMHCEACATEIKKRIMRMKGVESAESDLKSSQVTVKGVFEPQKLVEYVYKRTGKHAA 234
Query: 61 ILEI 64
I++I
Sbjct: 235 IMKI 238
>TAIR|locus:2029914 [details] [associations]
symbol:AT1G29100 "AT1G29100" species:3702 "Arabidopsis
thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006825 "copper ion
transport" evidence=ISS] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 EMBL:AC021043 HOGENOM:HOG000234967 IPI:IPI00532539
PIR:E86413 RefSeq:NP_174205.1 UniGene:At.51815
ProteinModelPortal:Q9LP41 SMR:Q9LP41 PaxDb:Q9LP41 PRIDE:Q9LP41
EnsemblPlants:AT1G29100.1 GeneID:839785 KEGG:ath:AT1G29100
TAIR:At1g29100 eggNOG:NOG321624 InParanoid:Q9LP41 OMA:SSYNYHV
PhylomeDB:Q9LP41 ProtClustDB:CLSN2913524 Genevestigator:Q9LP41
Uniprot:Q9LP41
Length = 141
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
M + +DC GC KVR+AL M + I+ K RV+V+G+ Q +K+ + +R
Sbjct: 1 MEVPMDCPGCENKVRKALEKMNGVHDVQIDIKQQRVTVTGS-AEQKKVLKVARNVTKRDI 59
Query: 61 ILEIHEFSSNNN 72
L + + +N
Sbjct: 60 CLWSYPYHPESN 71
>TAIR|locus:2180265 [details] [associations]
symbol:AT5G27690 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA;ISS] [GO:0046872 "metal ion binding"
evidence=IEA;ISS] InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0030001
SUPFAM:SSF55008 EMBL:BT003873 EMBL:BT005500 IPI:IPI00526285
RefSeq:NP_198121.1 UniGene:At.30792 ProteinModelPortal:Q84J88
SMR:Q84J88 IntAct:Q84J88 PaxDb:Q84J88 PRIDE:Q84J88
EnsemblPlants:AT5G27690.1 GeneID:832831 KEGG:ath:AT5G27690
TAIR:At5g27690 eggNOG:NOG248445 HOGENOM:HOG000006162
InParanoid:Q84J88 OMA:NNINNDC ProtClustDB:CLSN2916654
Genevestigator:Q84J88 Uniprot:Q84J88
Length = 352
Score = 95 (38.5 bits), Expect = 0.00042, P = 0.00042
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+R++I C GC RK+++ L + + + I+ K +V+V GN P+ L KI K R E
Sbjct: 34 LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMK-AGRHAE 92
Query: 61 ILEIHEFSSNNNN 73
+ +N NN
Sbjct: 93 LWPT-SMENNINN 104
>TAIR|locus:2205288 [details] [associations]
symbol:ATX1 "homolog of anti-oxidant 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0030001 "metal ion
transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IDA]
InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0000785 GO:GO:0030001
SUPFAM:SSF55008 HOGENOM:HOG000038877 HSSP:O00244 EMBL:AY039898
EMBL:AY077678 IPI:IPI00524818 RefSeq:NP_564870.1 UniGene:At.57055
ProteinModelPortal:Q94BT9 SMR:Q94BT9 IntAct:Q94BT9 STRING:Q94BT9
PRIDE:Q94BT9 EnsemblPlants:AT1G66240.1 GeneID:842940
KEGG:ath:AT1G66240 TAIR:At1g66240 InParanoid:Q94BT9 OMA:VGMSCEG
PhylomeDB:Q94BT9 Genevestigator:Q94BT9 Uniprot:Q94BT9
Length = 106
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+R+ + C GC V+R L M+ +ES ++ K +V+V GN P D ++ KT ++
Sbjct: 37 LRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQP-DAVLQTVTKTGKKTA 95
Query: 61 ILE 63
E
Sbjct: 96 FWE 98
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 110 110 0.00091 102 3 11 22 0.42 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 585 (62 KB)
Total size of DFA: 131 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.09u 0.12s 15.21t Elapsed: 00:00:01
Total cpu time: 15.09u 0.12s 15.21t Elapsed: 00:00:01
Start: Sat May 11 12:52:58 2013 End: Sat May 11 12:52:59 2013