BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037419
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26
OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1
Length = 153
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60
+++ +DC GC RKVRR++ M+ + S +E K +V+V G P + ++ +T ++VE
Sbjct: 30 IKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVE 89
Query: 61 I 61
+
Sbjct: 90 L 90
>sp|Q97GV3|ADDA_CLOAB ATP-dependent helicase/nuclease subunit A OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=addA PE=3 SV=1
Length = 1252
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 3 INIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62
I D +K +R ++D + E H+ + + SGN +P + A+KIR+K EIL
Sbjct: 358 IEFDIRYKDKKKKRGIIDFNDFE-HMCLSILTKSDESGNIVPSETALKIREKYE---EIL 413
Query: 63 EIHEFSSNN 71
I E+ +N
Sbjct: 414 -IDEYQDSN 421
>sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP9 PE=3 SV=1
Length = 586
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 18 LLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEG 77
L D+Q+LES+L KK + + I DL I+ K R IL++++ SN NN+++
Sbjct: 191 LEDLQKLESYLPIKKNLQTFLMSATINDDLN-DIKSKFCSRPAILKLNDEDSNQNNLVQY 249
Query: 78 HQEQLLQDQRPQNQVMSSWNLI 99
+ + D+ V+ NLI
Sbjct: 250 YAKTTEFDKFLLTYVIFKLNLI 271
>sp|Q47163|T1MP_ECOLX Type I restriction enzyme EcoprrI M protein OS=Escherichia coli
GN=hsdM PE=3 SV=1
Length = 520
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 9 GCYRKVRRALLDMQELESHLIEKKMCRVSVSGN-FIPQDLAIKI----RKKTNRRVEILE 63
G +K+R+ L+D +E+ +S++ N F +A+ I + KT+ +V+ ++
Sbjct: 366 GAEQKIRQYLVDNNYVET--------VISLAPNLFFGTTIAVNILVLSKHKTDTKVQFID 417
Query: 64 IHEF---SSNNNNIIEGHQEQLLQ 84
E +NNN + + H EQ++Q
Sbjct: 418 ASELFKKETNNNILTDAHIEQIMQ 441
>sp|O74676|CDR4_CANAX ABC transporter CDR4 OS=Candida albicans GN=CDR4 PE=3 SV=1
Length = 1490
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 45 QDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGHQEQLLQ 84
Q A+K RKK N +E EI + + +N E +Q+++LQ
Sbjct: 801 QQRALKKRKKANNDIESGEIEKVTPEFDNEYENNQDKMLQ 840
>sp|Q9FJ40|GDL86_ARATH GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960
PE=2 SV=1
Length = 375
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 11 YRKVRRAL---LDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKT 55
+R+ +R L + QE+E H+ E C + + +F+ I IR+KT
Sbjct: 154 FREYKRKLEGKMGKQEMEKHIEEAMFCVSAGTNDFVINYFTIPIRRKT 201
>sp|A2C6Q8|RIMP_PROM3 Ribosome maturation factor RimP OS=Prochlorococcus marinus
(strain MIT 9303) GN=rimP PE=3 SV=1
Length = 154
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 32 KMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGHQ 79
K+C V V + IP + ++IR+K V + + FS++ + +E Q
Sbjct: 23 KLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQ 70
>sp|C1CNS9|PUR9_STRZT Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain Taiwan19F-14) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|C1CHW2|PUR9_STRZP Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain P1031) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|C1CBM7|PUR9_STRZJ Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain JJA) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|Q8DRM1|PUR9_STRR6 Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=purH PE=3 SV=2
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|Q97T99|PUR9_STRPN Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|B8ZJN3|PUR9_STRPJ Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=purH
PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|B1I7V8|PUR9_STRPI Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain Hungary19A-6) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|C1C9V4|PUR9_STRP7 Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae (strain 70585) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|B5E5J9|PUR9_STRP4 Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae serotype 19F (strain G54) GN=purH PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|Q04N19|PUR9_STRP2 Bifunctional purine biosynthesis protein PurH OS=Streptococcus
pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=purH
PE=3 SV=1
Length = 515
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 36 VSVSGNFIPQDLAIKIRKKTNRRVEIL-----EIHEFSSNNNNIIEGHQEQLLQDQRPQN 90
+ ++ ++ + LAI I KK N R+ L E E + ++ G L+Q+Q
Sbjct: 328 IIIAPSYTDEALAILINKKKNLRILALPFNAQEASEVEAEYTGVVGG---LLVQNQDVVK 384
Query: 91 QVMSSWNLISKQNPCATYVT 110
+ + W +++K+ P T T
Sbjct: 385 ESPADWQVVTKRQPTETEAT 404
>sp|Q7V5M7|RIMP_PROMM Ribosome maturation factor RimP OS=Prochlorococcus marinus
(strain MIT 9313) GN=rimP PE=3 SV=1
Length = 154
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 32 KMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGHQ 79
K+C V V + IP + ++IR+K V + + FS++ + +E Q
Sbjct: 23 KLCCVQVFTHLIPMTIQVQIRRKDGSDVSLDDCAHFSASMDEALEASQ 70
>sp|Q292F9|GDAP2_DROPS Protein GDAP2 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15091 PE=3 SV=1
Length = 542
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 10 CYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRR 58
CYR V L +EL H I +C +SV P D+A I +T RR
Sbjct: 164 CYRNV---LCKAKELNLHTI--ALCNISVHQKSFPADVAAHIALRTIRR 207
>sp|P10484|T1M1_ECOLX Type I restriction enzyme EcoR124II M protein OS=Escherichia coli
GN=hsdM PE=3 SV=1
Length = 520
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 16/84 (19%)
Query: 9 GCYRKVRRALLDMQELESHLIEKKMCRVSVSGN-FIPQDLAIKI----RKKTNRRVEILE 63
G +K+R+ L+D +E+ +S++ N F +A+ I + KT+ V+ ++
Sbjct: 366 GAEQKIRQYLVDNNYVET--------VISLAPNLFFGTTIAVNILVLSKHKTDTNVQFID 417
Query: 64 IHEF---SSNNNNIIEGHQEQLLQ 84
E +NNN + + H EQ++Q
Sbjct: 418 ASELFKKETNNNILTDAHIEQIMQ 441
>sp|Q9QJT4|L_SHRV RNA-directed RNA polymerase L OS=Snakehead rhabdovirus GN=L PE=3 SV=1
Length = 1983
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 24 LESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGHQEQLL 83
+E L+E ++C V+V GN A+K R K N V +++ E + ++++ LL
Sbjct: 1671 VERELLEAELCDVTVPGNRKAIVDAVKRRIKPNESVLLIDEIENRGDAEDVLQQSISTLL 1730
Query: 84 Q 84
Q
Sbjct: 1731 Q 1731
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,895,868
Number of Sequences: 539616
Number of extensions: 1320577
Number of successful extensions: 3972
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3962
Number of HSP's gapped (non-prelim): 41
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)