Query 037419
Match_columns 110
No_of_seqs 152 out of 1216
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 20:41:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037419.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037419hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.7 9.4E-17 3.2E-21 97.8 7.1 62 1-64 6-67 (68)
2 1cc8_A Protein (metallochapero 99.6 8.7E-15 3E-19 89.5 8.1 63 1-64 9-72 (73)
3 4a4j_A Pacszia, cation-transpo 99.5 7.5E-14 2.6E-18 83.9 8.5 58 4-62 10-69 (69)
4 2crl_A Copper chaperone for su 99.5 1.3E-13 4.3E-18 90.2 8.0 66 1-67 23-88 (98)
5 3dxs_X Copper-transporting ATP 99.5 2E-13 7E-18 83.2 7.7 60 4-64 10-72 (74)
6 3fry_A Probable copper-exporti 99.4 2.5E-13 8.7E-18 83.3 6.5 58 4-64 13-70 (73)
7 2roe_A Heavy metal binding pro 99.4 5.3E-13 1.8E-17 79.2 7.1 58 4-62 8-65 (66)
8 2xmm_A SSR2857 protein, ATX1; 99.4 7.5E-13 2.6E-17 76.9 5.8 57 2-59 6-63 (64)
9 1qup_A Superoxide dismutase 1 99.3 2.4E-12 8.1E-17 96.2 6.7 77 1-78 10-86 (222)
10 1cpz_A Protein (COPZ); copper 99.3 1.3E-11 4.4E-16 72.3 8.0 57 4-61 8-67 (68)
11 2xmw_A PACS-N, cation-transpor 99.3 1.4E-11 4.7E-16 72.8 8.0 58 4-62 11-70 (71)
12 2kt2_A Mercuric reductase; nme 99.3 1.3E-11 4.4E-16 73.0 7.5 58 4-62 8-67 (69)
13 1aw0_A Menkes copper-transport 99.3 1.1E-11 3.6E-16 73.6 7.1 60 2-62 8-71 (72)
14 2l3m_A Copper-ION-binding prot 99.3 1.7E-11 5.8E-16 72.7 7.6 55 4-59 13-70 (71)
15 2k2p_A Uncharacterized protein 99.3 5.1E-12 1.8E-16 80.4 5.6 55 4-59 30-84 (85)
16 2g9o_A Copper-transporting ATP 99.3 1.5E-11 5.1E-16 78.3 7.6 61 4-65 11-77 (90)
17 1osd_A MERP, hypothetical prot 99.3 2.4E-11 8.2E-16 72.0 8.0 57 4-61 11-70 (72)
18 3cjk_B Copper-transporting ATP 99.3 3.1E-11 1.1E-15 72.6 8.6 59 4-63 10-71 (75)
19 1fvq_A Copper-transporting ATP 99.3 1.8E-11 6.3E-16 72.6 7.0 59 4-63 10-70 (72)
20 1jk9_B CCS, copper chaperone f 99.3 8E-12 2.7E-16 94.9 6.4 77 1-78 11-87 (249)
21 1yg0_A COP associated protein; 99.2 3.1E-11 1.1E-15 70.3 7.1 55 4-59 9-65 (66)
22 2qif_A Copper chaperone COPZ; 99.2 4.5E-11 1.5E-15 69.3 7.7 55 4-59 10-67 (69)
23 1mwy_A ZNTA; open-faced beta-s 99.2 4.6E-11 1.6E-15 71.8 7.8 57 4-61 11-68 (73)
24 2kyz_A Heavy metal binding pro 99.2 1.3E-11 4.5E-16 73.4 5.2 57 2-61 6-63 (67)
25 1opz_A Potential copper-transp 99.2 4.5E-11 1.5E-15 71.2 7.3 58 4-62 14-74 (76)
26 1kvi_A Copper-transporting ATP 99.2 3E-11 1E-15 73.4 6.6 59 4-63 16-77 (79)
27 1q8l_A Copper-transporting ATP 99.2 2.8E-11 9.7E-16 75.3 6.4 60 4-64 17-79 (84)
28 1yjr_A Copper-transporting ATP 99.2 4.3E-11 1.5E-15 71.5 6.5 58 4-62 12-72 (75)
29 1p6t_A Potential copper-transp 99.2 4.7E-11 1.6E-15 80.9 7.1 64 2-66 79-146 (151)
30 1y3j_A Copper-transporting ATP 99.2 3.5E-11 1.2E-15 73.0 5.6 59 4-63 11-72 (77)
31 2ldi_A Zinc-transporting ATPas 99.2 4.8E-11 1.6E-15 69.9 5.9 56 4-60 11-69 (71)
32 2ew9_A Copper-transporting ATP 99.2 8.9E-11 3.1E-15 79.0 7.1 57 4-61 88-147 (149)
33 1jww_A Potential copper-transp 99.1 1.2E-10 4.3E-15 70.3 6.7 59 4-63 11-72 (80)
34 2kkh_A Putative heavy metal tr 99.1 3.7E-10 1.3E-14 71.9 8.1 62 4-66 24-88 (95)
35 2ofg_X Zinc-transporting ATPas 99.1 3.8E-10 1.3E-14 74.6 7.6 58 4-62 16-76 (111)
36 2rop_A Copper-transporting ATP 99.1 4.9E-10 1.7E-14 80.3 8.0 61 4-65 130-193 (202)
37 2aj0_A Probable cadmium-transp 99.0 3.4E-10 1.2E-14 67.7 4.5 52 4-60 11-62 (71)
38 2ew9_A Copper-transporting ATP 98.9 5.2E-09 1.8E-13 70.2 6.9 59 4-63 12-73 (149)
39 1p6t_A Potential copper-transp 98.7 6.4E-08 2.2E-12 65.2 7.1 55 4-59 14-71 (151)
40 3j09_A COPA, copper-exporting 98.6 5.9E-08 2E-12 82.3 7.8 57 4-61 10-69 (723)
41 2rop_A Copper-transporting ATP 98.6 7.3E-08 2.5E-12 68.8 6.8 56 4-60 28-89 (202)
42 3bpd_A Uncharacterized protein 88.5 1.3 4.4E-05 29.1 5.6 50 13-63 23-80 (100)
43 2x3d_A SSO6206; unknown functi 84.8 3.9 0.00013 26.6 6.4 50 13-63 22-79 (96)
44 2raq_A Conserved protein MTH88 83.6 3.6 0.00012 26.9 5.9 49 14-63 24-80 (97)
45 2jsx_A Protein NAPD; TAT, proo 78.3 7.6 0.00026 24.7 6.1 41 11-51 19-60 (95)
46 3lno_A Putative uncharacterize 77.4 1.2 4E-05 28.9 2.0 30 3-32 50-86 (108)
47 3v4k_A DNA DC->DU-editing enzy 64.0 9.7 0.00033 27.8 4.5 57 6-67 110-166 (203)
48 3cq1_A Putative uncharacterize 63.4 7.2 0.00025 24.6 3.4 29 4-32 48-82 (103)
49 1uwd_A Hypothetical protein TM 63.1 7.2 0.00025 24.6 3.3 22 11-32 62-83 (103)
50 3hz7_A Uncharacterized protein 60.4 13 0.00045 23.0 4.1 50 4-62 8-59 (87)
51 4e6k_G BFD, bacterioferritin-a 60.0 2.5 8.7E-05 25.8 0.6 19 2-20 33-51 (73)
52 1jdq_A TM006 protein, hypothet 54.8 37 0.0013 21.4 5.9 51 4-62 33-83 (98)
53 3lvj_C Sulfurtransferase TUSA; 53.2 35 0.0012 20.5 6.2 51 4-62 17-67 (82)
54 3vow_A Probable DNA DC->DU-edi 47.1 6.6 0.00023 28.4 1.2 56 6-67 96-153 (190)
55 2nyt_A Probable C->U-editing e 44.9 14 0.00048 26.4 2.6 53 6-64 93-147 (190)
56 4gwb_A Peptide methionine sulf 39.2 21 0.00071 25.2 2.7 27 8-34 9-35 (168)
57 2w7v_A General secretion pathw 38.7 74 0.0025 20.2 5.9 48 13-62 16-69 (95)
58 1pav_A Hypothetical protein TA 38.0 28 0.00096 20.6 2.9 49 4-60 13-61 (78)
59 1je3_A EC005, hypothetical 8.6 36.2 51 0.0017 20.8 4.0 50 4-61 34-83 (97)
60 3ady_A DOTD; 3-layer(BAB) sand 35.5 29 0.00099 24.0 2.9 43 32-74 64-106 (148)
61 3pro_C Alpha-lytic protease; P 33.3 56 0.0019 22.8 4.2 35 22-57 114-149 (166)
62 1nwa_A Peptide methionine sulf 32.7 30 0.001 25.2 2.7 27 8-34 32-58 (203)
63 2hiy_A Hypothetical protein; C 31.8 88 0.003 21.8 5.1 48 12-60 25-76 (183)
64 3bqh_A PILB, peptide methionin 31.7 32 0.0011 24.8 2.7 28 8-35 9-36 (193)
65 1fvg_A Peptide methionine sulf 29.3 38 0.0013 24.5 2.8 28 8-35 50-77 (199)
66 1r7h_A NRDH-redoxin; thioredox 29.0 52 0.0018 17.9 2.9 25 5-31 9-33 (75)
67 1ff3_A Peptide methionine sulf 28.4 41 0.0014 24.5 2.9 27 8-34 49-75 (211)
68 2cpq_A FragIle X mental retard 27.5 1.2E+02 0.004 19.0 6.0 38 13-51 35-72 (91)
69 1ego_A Glutaredoxin; electron 27.4 34 0.0012 19.3 2.0 26 5-31 9-38 (85)
70 1gh8_A Translation elongation 26.5 43 0.0015 21.0 2.4 21 11-31 64-84 (89)
71 1h75_A Glutaredoxin-like prote 26.5 59 0.002 18.1 2.9 24 5-30 9-32 (81)
72 2yy3_A Elongation factor 1-bet 26.0 42 0.0014 21.2 2.3 21 11-31 67-87 (91)
73 2j89_A Methionine sulfoxide re 25.9 46 0.0016 25.1 2.8 28 8-35 101-128 (261)
74 4g1a_A AQ-C16C19 peptide; heli 25.1 22 0.00075 18.1 0.6 12 5-16 14-25 (32)
75 3q9p_A Heat shock protein beta 24.8 58 0.002 19.5 2.7 23 20-42 14-38 (85)
76 1yj7_A ESCJ; mixed alpha/beta, 24.1 66 0.0023 22.3 3.2 22 11-32 92-113 (171)
77 2fi0_A Conserved domain protei 24.0 62 0.0021 19.4 2.7 19 41-60 60-78 (81)
78 3h8q_A Thioredoxin reductase 3 23.9 1.3E+02 0.0045 18.4 5.0 44 5-57 25-68 (114)
79 2y9j_Y Lipoprotein PRGK, prote 23.9 67 0.0023 22.2 3.2 21 11-31 90-110 (170)
80 2qip_A Protein of unknown func 23.8 63 0.0022 21.6 3.0 31 34-65 111-142 (165)
81 1wik_A Thioredoxin-like protei 23.6 68 0.0023 19.6 3.0 25 5-31 28-52 (109)
82 2v50_A Multidrug resistance pr 23.2 1.3E+02 0.0045 26.1 5.5 42 11-52 159-208 (1052)
83 2khp_A Glutaredoxin; thioredox 22.1 80 0.0027 18.2 2.9 25 5-31 14-38 (92)
84 3rdw_A Putative arsenate reduc 21.9 1.6E+02 0.0054 18.7 4.6 46 5-59 13-59 (121)
85 4ar0_A Type IV pilus biogenesi 21.3 1.5E+02 0.0052 19.3 4.5 50 12-61 44-94 (128)
86 4dx5_A Acriflavine resistance 21.2 1.5E+02 0.0052 25.6 5.5 42 11-52 159-208 (1057)
87 1t1v_A SH3BGRL3, SH3 domain-bi 20.7 72 0.0024 18.8 2.5 41 5-56 10-55 (93)
88 3qfa_C Thioredoxin; protein-pr 20.3 1.5E+02 0.0051 17.7 4.1 28 5-32 41-71 (116)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.68 E-value=9.4e-17 Score=97.81 Aligned_cols=62 Identities=23% Similarity=0.405 Sum_probs=58.5
Q ss_pred CcccccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEccc
Q 037419 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 1 lkVgM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~ 64 (110)
|+|||+|.+|+.+|+++|.+++|| ++.+|+.+++++|.+..+++.|.++| +++||.+.++++
T Consensus 6 ~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i-~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 6 FSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATL-KKTGKTVSYLGL 67 (68)
T ss_dssp EEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHH-HTTCSCEEEEEC
T ss_pred EEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHH-HHcCCceEecCC
Confidence 457999999999999999999999 99999999999999989999999999 699999998875
No 2
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.58 E-value=8.7e-15 Score=89.47 Aligned_cols=63 Identities=22% Similarity=0.295 Sum_probs=58.0
Q ss_pred CcccccchhHHHHHHHHHhcCC-CeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEccc
Q 037419 1 MRINIDCNGCYRKVRRALLDMQ-ELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 1 lkVgM~C~~Ca~kIekaL~~l~-GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~ 64 (110)
|+|+|+|++|+.+|+++|.+++ ||.++.+|+.+++++|.+..+++.|.++| +++||.+.++.+
T Consensus 9 ~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i-~~~Gy~~~~~~~ 72 (73)
T 1cc8_A 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKI-KKTGKEVRSGKQ 72 (73)
T ss_dssp EEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHH-HTTSSCEEEEEE
T ss_pred EEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHH-HHhCCCceeeec
Confidence 3577999999999999999999 99999999999999999888999999999 699999987653
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.52 E-value=7.5e-14 Score=83.92 Aligned_cols=58 Identities=22% Similarity=0.447 Sum_probs=54.2
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEe--cCCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVS--GNFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~--g~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|. +..+++.|.++| +++||.++++
T Consensus 10 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i-~~~Gy~~~~~ 69 (69)
T 4a4j_A 10 GMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAV-ERAGYHARVL 69 (69)
T ss_dssp SCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHH-HHTTCEEEEC
T ss_pred CeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHH-HHcCCceEeC
Confidence 799999999999999999999999999999999998 667999999999 6999998763
No 4
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=1.3e-13 Score=90.25 Aligned_cols=66 Identities=15% Similarity=0.271 Sum_probs=60.0
Q ss_pred CcccccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEcccccC
Q 037419 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEF 67 (110)
Q Consensus 1 lkVgM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~~p~ 67 (110)
|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..++..|.++| +++||.+.++...+.
T Consensus 23 l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i-~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 23 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALL-EGTGRQAVLKGMGSG 88 (98)
T ss_dssp EEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHH-HTTTSCEEEEESCCC
T ss_pred EEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHH-HHhCCceEEccCCCC
Confidence 457799999999999999999999999999999999999888999999999 699999988765543
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.47 E-value=2e-13 Score=83.17 Aligned_cols=60 Identities=20% Similarity=0.274 Sum_probs=54.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~~ 64 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..+++.|.++| +++||.++++..
T Consensus 10 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 10 GMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEI-EDAGFEAEILAE 72 (74)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHH-HHHTCEEEEEEE
T ss_pred CcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHCCCceEEccC
Confidence 8999999999999999999999999999999999963 35899999999 699999988753
No 6
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.44 E-value=2.5e-13 Score=83.29 Aligned_cols=58 Identities=10% Similarity=0.227 Sum_probs=54.5
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~ 64 (110)
||+|.+|+.+|+++|.+ +||..+.+|+.+++++|... +++.|.++| +++||.+.+.++
T Consensus 13 gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i-~~~Gy~~~~~~~ 70 (73)
T 3fry_A 13 GLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAV-EAAGYQAKLRSS 70 (73)
T ss_dssp SSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHH-HHTTCEEEECCS
T ss_pred CCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHH-HHcCCceEecCc
Confidence 79999999999999999 99999999999999999988 999999999 699999988753
No 7
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.42 E-value=5.3e-13 Score=79.17 Aligned_cols=58 Identities=22% Similarity=0.387 Sum_probs=53.7
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|.+..++..|.+.| +++||.+..+
T Consensus 8 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i-~~~Gy~~~~~ 65 (66)
T 2roe_A 8 GMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAV-EEEGYKAEVL 65 (66)
T ss_dssp CCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHH-HTTTCEEEEC
T ss_pred CeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHH-HHcCCCcEec
Confidence 799999999999999999999999999999999997667899999999 6999987654
No 8
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.38 E-value=7.5e-13 Score=76.89 Aligned_cols=57 Identities=16% Similarity=0.328 Sum_probs=52.9
Q ss_pred cc-cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcE
Q 037419 2 RI-NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 2 kV-gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a 59 (110)
+| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..++..|.+.| +++||.+
T Consensus 6 ~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i-~~~G~~~ 63 (64)
T 2xmm_A 6 TVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAI-ASAGYEV 63 (64)
T ss_dssp ECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHH-HHTTCCC
T ss_pred EECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHH-HHcCCCC
Confidence 44 899999999999999999999999999999999999878899999999 6999965
No 9
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.32 E-value=2.4e-12 Score=96.16 Aligned_cols=77 Identities=16% Similarity=0.284 Sum_probs=66.3
Q ss_pred CcccccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEcccccCCCCCCCcchhh
Q 037419 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGH 78 (110)
Q Consensus 1 lkVgM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~~p~~~~~~~~~~~h 78 (110)
|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..++++|.++| +++||.+.++...+.+....++++.+
T Consensus 10 l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI-~~~Gy~a~~~~~~~~~~~av~~l~~~ 86 (222)
T 1qup_A 10 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL-RNCGKDAIIRGAGKPNSSAVAILETF 86 (222)
T ss_dssp EECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHH-HHTTCCCEEECCSCTTCEEEEEEECC
T ss_pred EEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHH-HHcCCccccccCCCccceeeEEeccc
Confidence 356799999999999999999999999999999999999888999999999 69999999887766554455555543
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.30 E-value=1.3e-11 Score=72.32 Aligned_cols=57 Identities=16% Similarity=0.313 Sum_probs=51.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~ 61 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..+++.|.+.+ +++||.++.
T Consensus 8 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~ 67 (68)
T 1cpz_A 8 GMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAI-NELGYQAEV 67 (68)
T ss_dssp CCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HTTSSCEEE
T ss_pred CeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCCccc
Confidence 8999999999999999999999999999999999974 35788999999 699998765
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.30 E-value=1.4e-11 Score=72.77 Aligned_cols=58 Identities=19% Similarity=0.355 Sum_probs=51.4
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC--CCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN--FIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~--~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|... .+++.|.+.| +++||.+.+.
T Consensus 11 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i-~~~G~~~~~~ 70 (71)
T 2xmw_A 11 GMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAV-ERAGYHARVL 70 (71)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHH-HHHTCEEEEE
T ss_pred CcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHH-HHcCCCceeC
Confidence 79999999999999999999999999999999999743 5788899999 6999987653
No 12
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.29 E-value=1.3e-11 Score=73.00 Aligned_cols=58 Identities=16% Similarity=0.308 Sum_probs=52.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec--CCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG--NFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g--~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|++|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.+.| +++||.+.+.
T Consensus 8 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i-~~~Gy~~~~~ 67 (69)
T 2kt2_A 8 GMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAV-AGLGYKATLA 67 (69)
T ss_dssp SSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHH-HTTTSEEECC
T ss_pred CcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHH-HHCCCceEeC
Confidence 8999999999999999999999999999999999863 35788999999 6999987653
No 13
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.29 E-value=1.1e-11 Score=73.62 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=53.1
Q ss_pred cc-cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC---CCHHHHHHHHHHhcCCcEEEc
Q 037419 2 RI-NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN---FIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 2 kV-gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~---~d~~~I~~~I~~k~G~~a~~~ 62 (110)
+| ||+|.+|+.+|+++|.+++||.++.+|+.+++++|... .++..|.+.| +++||.+.+.
T Consensus 8 ~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~~ 71 (72)
T 1aw0_A 8 NIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAI-EDMGFDATLS 71 (72)
T ss_dssp EEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHH-HHHTCEEEEC
T ss_pred EECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHH-HHCCCCcEeC
Confidence 44 89999999999999999999999999999999999743 5788999999 6999987653
No 14
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.28 E-value=1.7e-11 Score=72.71 Aligned_cols=55 Identities=15% Similarity=0.282 Sum_probs=50.2
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a 59 (110)
||+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.+.| +++||.+
T Consensus 13 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~ 70 (71)
T 2l3m_A 13 GMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVI-EDQGYDV 70 (71)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHH-HHTTCEE
T ss_pred CccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCCC
Confidence 7999999999999999999999999999999999963 45788999999 6999975
No 15
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.28 E-value=5.1e-12 Score=80.43 Aligned_cols=55 Identities=15% Similarity=0.139 Sum_probs=52.2
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a 59 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|.+..++..|.++| +++||.+
T Consensus 30 Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i-~~~Gy~~ 84 (85)
T 2k2p_A 30 DMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEII-TAAGYTP 84 (85)
T ss_dssp TCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHH-HHTTCCC
T ss_pred CCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHH-HHcCCCC
Confidence 799999999999999999999999999999999999888999999999 6999964
No 16
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.27 E-value=1.5e-11 Score=78.28 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=54.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhc---CCcEEEcccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKT---NRRVEILEIH 65 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~---G~~a~~~~~~ 65 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|.. .+++..|.++| +++ ||++.++.+.
T Consensus 11 Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i-~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 11 GMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAI-EAVSPGLYRVSITSEV 77 (90)
T ss_dssp SCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHH-HTTSTTTCEEECCCCC
T ss_pred CcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHH-HhccCCCeEEEEeCCC
Confidence 8999999999999999999999999999999999974 35788999999 699 5988776653
No 17
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.27 E-value=2.4e-11 Score=72.04 Aligned_cols=57 Identities=12% Similarity=0.187 Sum_probs=51.7
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~ 61 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..+++.|.+.| +++||.+.+
T Consensus 11 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~ 70 (72)
T 1osd_A 11 GMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKAT-ADAGYPSSV 70 (72)
T ss_dssp TCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHH-HHTTCCCEE
T ss_pred CeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HhcCCCeEe
Confidence 7999999999999999999999999999999999963 35788999999 699998765
No 18
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.27 E-value=3.1e-11 Score=72.57 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=53.0
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..+++.|.+.| +++||.+.+..
T Consensus 10 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~ 71 (75)
T 3cjk_B 10 GMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI-DDMGFDAVIHN 71 (75)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HHTTCCEEEEE
T ss_pred CccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCceEeec
Confidence 8999999999999999999999999999999999964 34788999999 69999887654
No 19
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.26 E-value=1.8e-11 Score=72.57 Aligned_cols=59 Identities=15% Similarity=0.248 Sum_probs=53.3
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec--CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG--NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g--~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.++.
T Consensus 10 gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i-~~~G~~~~~~~ 70 (72)
T 1fvq_A 10 GMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEII-EDCGFDCEILR 70 (72)
T ss_dssp SCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHH-HHHTCCEEEEE
T ss_pred CeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHH-HHCCCceEEcc
Confidence 7999999999999999999999999999999999974 35788999999 69999987764
No 20
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.25 E-value=8e-12 Score=94.87 Aligned_cols=77 Identities=16% Similarity=0.284 Sum_probs=65.9
Q ss_pred CcccccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEcccccCCCCCCCcchhh
Q 037419 1 MRINIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNIIEGH 78 (110)
Q Consensus 1 lkVgM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~~p~~~~~~~~~~~h 78 (110)
|+|.|+|.+|+.+|+++|.+++||.++.+|+.+++++|.+..+++.|.++| +++||.+.++...+.+....++++.+
T Consensus 11 l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI-e~~Gy~a~~~~~~~~~~~Av~~l~~~ 87 (249)
T 1jk9_B 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTL-RNCGKDAIIRGAGKPNSSAVAILETF 87 (249)
T ss_dssp EECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHH-HTTTCCCEEEEESSTTSEEEEEEEES
T ss_pred EEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHH-HHhCCCcccccCCcccceeEEEeccc
Confidence 356799999999999999999999999999999999999888999999999 69999998887766554445555543
No 21
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.24 E-value=3.1e-11 Score=70.27 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=49.8
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC--CCHHHHHHHHHHhcCCcE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN--FIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~--~d~~~I~~~I~~k~G~~a 59 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|... .+++.|.+.| +++||.+
T Consensus 9 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i-~~~G~~~ 65 (66)
T 1yg0_A 9 SITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEAL-LDAGQEV 65 (66)
T ss_dssp TCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHH-HHHTCCC
T ss_pred CcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHH-HHcCCCc
Confidence 79999999999999999999999999999999999743 4788899999 6999964
No 22
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.23 E-value=4.5e-11 Score=69.29 Aligned_cols=55 Identities=18% Similarity=0.323 Sum_probs=49.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a 59 (110)
||+|++|+.+|+++|.+++||.++.+|+..++++|.. ..++..|.+.| +++||.+
T Consensus 10 gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~ 67 (69)
T 2qif_A 10 GMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAI-EDQGYDV 67 (69)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HHTTCEE
T ss_pred CcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCCc
Confidence 7999999999999999999999999999999999963 35788899999 6999965
No 23
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.23 E-value=4.6e-11 Score=71.75 Aligned_cols=57 Identities=18% Similarity=0.311 Sum_probs=50.6
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCC-CHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNF-IPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~-d~~~I~~~I~~k~G~~a~~ 61 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.... ..+.|.+.| +++||.+..
T Consensus 11 gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i-~~~Gy~~~~ 68 (73)
T 1mwy_A 11 GMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAL-QKAGYSLRD 68 (73)
T ss_dssp SCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHH-HHHTCEEEE
T ss_pred CcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHH-HHcCCcccc
Confidence 799999999999999999999999999999999997543 367888899 699998754
No 24
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.23 E-value=1.3e-11 Score=73.36 Aligned_cols=57 Identities=19% Similarity=0.374 Sum_probs=50.7
Q ss_pred cc-cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEE
Q 037419 2 RI-NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 2 kV-gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~ 61 (110)
+| ||+|++|+.+|+++|.++ ||.++.+|+.+++++|....+ ..|.+.| +++||.+.+
T Consensus 6 ~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i-~~~Gy~~~~ 63 (67)
T 2kyz_A 6 YVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKL-EEIDYPVES 63 (67)
T ss_dssp ECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHH-HTTTCCCCB
T ss_pred EECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHH-HHcCCceee
Confidence 44 899999999999999999 999999999999999986655 8899999 699997654
No 25
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.22 E-value=4.5e-11 Score=71.19 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=52.0
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|.+|+.+|+++|.+++||.++.+|+..++++|.. ..+++.|.+.| +++||.+.++
T Consensus 14 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~~ 74 (76)
T 1opz_A 14 GMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI-EKLGYHVVIE 74 (76)
T ss_dssp SCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHH-HHHTCEEECC
T ss_pred CcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHCCCceecC
Confidence 7999999999999999999999999999999999963 35788999999 6999987654
No 26
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.22 E-value=3e-11 Score=73.44 Aligned_cols=59 Identities=12% Similarity=0.190 Sum_probs=52.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.+..
T Consensus 16 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~ 77 (79)
T 1kvi_A 16 GMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAI-DDMGFDAVIHN 77 (79)
T ss_dssp CCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHH-HHHCCCEEECC
T ss_pred CccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHH-HHCCCceEecC
Confidence 8999999999999999999999999999999999964 24778999999 69999887643
No 27
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.21 E-value=2.8e-11 Score=75.27 Aligned_cols=60 Identities=7% Similarity=0.141 Sum_probs=53.8
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~~ 64 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.+...
T Consensus 17 gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 17 GMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQI-EAMGFPAFVKKQ 79 (84)
T ss_dssp CTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHH-HHTTCCEECSCC
T ss_pred CcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCceEecCC
Confidence 8999999999999999999999999999999999974 35788999999 699998876553
No 28
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.20 E-value=4.3e-11 Score=71.47 Aligned_cols=58 Identities=12% Similarity=0.274 Sum_probs=51.6
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC---CCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN---FIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~---~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|... .++..|.+.| +++||.+.+.
T Consensus 12 gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~~ 72 (75)
T 1yjr_A 12 GMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTI-ESLGFEPSLV 72 (75)
T ss_dssp TCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHH-HHHHCEEEES
T ss_pred CcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCCceee
Confidence 89999999999999999999999999999999999743 3567899999 6999987654
No 29
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.19 E-value=4.7e-11 Score=80.88 Aligned_cols=64 Identities=14% Similarity=0.295 Sum_probs=56.4
Q ss_pred cc-cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEccccc
Q 037419 2 RI-NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILEIHE 66 (110)
Q Consensus 2 kV-gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~~~p 66 (110)
+| ||+|++|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.++...+
T Consensus 79 ~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~~~~ 146 (151)
T 1p6t_A 79 DIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV-DKLGYKLKLKGEQD 146 (151)
T ss_dssp EESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHH-HHHTCCEEESCSSS
T ss_pred EecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHH-HHcCCCeEEcCccc
Confidence 44 8999999999999999999999999999999999973 46889999999 69999988765444
No 30
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.18 E-value=3.5e-11 Score=73.01 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=52.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.++.
T Consensus 11 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~ 72 (77)
T 1y3j_A 11 GMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFI-RELGFGATVIE 72 (77)
T ss_dssp CGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHH-HHHTSCEEEES
T ss_pred CeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCceEECC
Confidence 8999999999999999999999999999999999964 24778899999 69999887653
No 31
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.18 E-value=4.8e-11 Score=69.87 Aligned_cols=56 Identities=14% Similarity=0.276 Sum_probs=50.5
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVE 60 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~ 60 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..+...+.+.+ +++||.+.
T Consensus 11 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~ 69 (71)
T 2ldi_A 11 GMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI-AALGYTLA 69 (71)
T ss_dssp TCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHH-HTTTCEEE
T ss_pred CccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCCcc
Confidence 7999999999999999999999999999999999963 35778899999 69999764
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.15 E-value=8.9e-11 Score=78.99 Aligned_cols=57 Identities=12% Similarity=0.264 Sum_probs=52.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC---CCHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN---FIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~---~d~~~I~~~I~~k~G~~a~~ 61 (110)
||+|++|+.+|+++|.+++||.++.+|+.+++++|..+ .++..|.++| +++||.+.+
T Consensus 88 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~ 147 (149)
T 2ew9_A 88 GMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKII-EEIGFHASL 147 (149)
T ss_dssp SCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHH-HHHTCEEEC
T ss_pred eccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHH-HhCCCceEe
Confidence 89999999999999999999999999999999999743 5789999999 699998765
No 33
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.14 E-value=1.2e-10 Score=70.35 Aligned_cols=59 Identities=14% Similarity=0.292 Sum_probs=52.8
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.+..
T Consensus 11 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~~~ 72 (80)
T 1jww_A 11 GMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAV-DKLGYKLKLKG 72 (80)
T ss_dssp SCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHH-HHHTSEEEECC
T ss_pred CccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHcCCeEEecC
Confidence 7999999999999999999999999999999999963 35788899999 69999887754
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.11 E-value=3.7e-10 Score=71.90 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=54.6
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC---CCHHHHHHHHHHhcCCcEEEccccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN---FIPQDLAIKIRKKTNRRVEILEIHE 66 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~---~d~~~I~~~I~~k~G~~a~~~~~~p 66 (110)
||+|.+|+.+|+++|.+++||..+.+|+..++++|... +++..|...| ..+||.+.+...+.
T Consensus 24 gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~~~~ 88 (95)
T 2kkh_A 24 GICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKAL-NEARLEANVRVNGE 88 (95)
T ss_dssp TCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HHHTCCEEESCCCC
T ss_pred CcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHH-HHcCCceEEecCCC
Confidence 89999999999999999999999999999999999743 4788899999 69999987765443
No 35
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.08 E-value=3.8e-10 Score=74.58 Aligned_cols=58 Identities=14% Similarity=0.246 Sum_probs=52.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecC---CCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGN---FIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~---~d~~~I~~~I~~k~G~~a~~~ 62 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|... .++..|.+.| +++||.+...
T Consensus 16 Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i-~~~Gy~~~~~ 76 (111)
T 2ofg_X 16 GMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERI-AALGYTLAEP 76 (111)
T ss_dssp CCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHH-HTTTCCEECC
T ss_pred CcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHH-HHcCCeeeec
Confidence 79999999999999999999999999999999999743 4778899999 6999987653
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.06 E-value=4.9e-10 Score=80.27 Aligned_cols=61 Identities=10% Similarity=0.242 Sum_probs=53.3
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcccc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILEIH 65 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~~~ 65 (110)
||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. ..++..|.+.| +++||.+.++...
T Consensus 130 Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~Gy~~~~~~~~ 193 (202)
T 2rop_A 130 GMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAI-EDMGFEASVVSES 193 (202)
T ss_dssp CCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HHHTSCEEEC---
T ss_pred CccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHH-HHcCCceEEcCCC
Confidence 7999999999999999999999999999999999963 35789999999 6999998876543
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.01 E-value=3.4e-10 Score=67.67 Aligned_cols=52 Identities=12% Similarity=0.370 Sum_probs=45.6
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~ 60 (110)
||+|.+|+.+|+++|.+++||.++.+|+..++++|.+..+ .+.| +++||.+.
T Consensus 11 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i-~~~Gy~~~ 62 (71)
T 2aj0_A 11 GLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQV-EQAGAFEH 62 (71)
T ss_dssp SCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHH-HHHHTTTT
T ss_pred CcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHH-HHhCCCcc
Confidence 7999999999999999999999999999999999987654 4577 58998643
No 38
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.87 E-value=5.2e-09 Score=70.22 Aligned_cols=59 Identities=17% Similarity=0.302 Sum_probs=52.5
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEEcc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
||+|.+|+.+|+++|.+++||.++.+|+.++++.|.. ..++..+.+.| +++||.+.+..
T Consensus 12 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~~~~~ 73 (149)
T 2ew9_A 12 GMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFI-QDLGFEAAVME 73 (149)
T ss_dssp CCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHH-HHHTCEEEECS
T ss_pred CeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHH-hcCCCceEeec
Confidence 8999999999999999999999999999999999863 35778999999 69999887643
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.67 E-value=6.4e-08 Score=65.19 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=49.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRV 59 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a 59 (110)
||+|.+|+.+|+++|.+++||.++.+++..++++|.. ..++..+.+.+ +++||.+
T Consensus 14 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~G~~~ 71 (151)
T 1p6t_A 14 GMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKI-EKLGYHV 71 (151)
T ss_dssp SCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHH-HHHTCEE
T ss_pred CCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHH-HHcCCcc
Confidence 7999999999999999999999999999999998863 34778899999 6999965
No 40
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.64 E-value=5.9e-08 Score=82.31 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=52.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~G~~a~~ 61 (110)
||+|++|+.+|+++|.+++||.++++|+.+++++|.. ..+++++.+++ +++||++..
T Consensus 10 GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai-~~~Gy~~~~ 69 (723)
T 3j09_A 10 GMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVI-EDLGYGVVD 69 (723)
T ss_dssp TCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-HHHCCEESS
T ss_pred CCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHH-HhcCCcccc
Confidence 8999999999999999999999999999999999963 36899999999 699998743
No 41
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.63 E-value=7.3e-08 Score=68.84 Aligned_cols=56 Identities=16% Similarity=0.232 Sum_probs=49.1
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEec---CCCHHHHHHHHHHhc---CCcEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSG---NFIPQDLAIKIRKKT---NRRVE 60 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g---~~d~~~I~~~I~~k~---G~~a~ 60 (110)
||+|.+|+.+|+++|.+++||.++.+++.+++++|.. ..++..|.+.| +++ ||.+.
T Consensus 28 Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i-~~~~~gg~~v~ 89 (202)
T 2rop_A 28 GMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAI-EALPPGNFKVS 89 (202)
T ss_dssp SGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHH-TTSSSSCSEEE
T ss_pred CeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHH-HHhccCCeEEE
Confidence 7999999999999999999999999999999999964 25788899999 688 36654
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=88.50 E-value=1.3 Score=29.15 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=36.6
Q ss_pred HHHHHHhcCCCeeEEEEec-----cCC--EEEEecC-CCHHHHHHHHHHhcCCcEEEcc
Q 037419 13 KVRRALLDMQELESHLIEK-----KMC--RVSVSGN-FIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 13 kIekaL~~l~GV~~v~vd~-----~~~--kVtV~g~-~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
.+-+.|.+++||..|.+.+ .+. +++|+|. +|.++|.++| ++.|-.+..+.
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~I-E~~GgvIHSID 80 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVI-EDMGGVIHSVD 80 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHH-HTTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHH-HHcCCeEEeee
Confidence 3557889999998776544 333 3445675 7999999999 69998776554
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=84.75 E-value=3.9 Score=26.63 Aligned_cols=50 Identities=8% Similarity=0.190 Sum_probs=36.4
Q ss_pred HHHHHHhcCCCeeEEEEec-----cCC--EEEEecC-CCHHHHHHHHHHhcCCcEEEcc
Q 037419 13 KVRRALLDMQELESHLIEK-----KMC--RVSVSGN-FIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 13 kIekaL~~l~GV~~v~vd~-----~~~--kVtV~g~-~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
.+-+.|.+++||..|.+.+ .+. +++|+|. ++.++|.++| ++.|-.++.+.
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~I-E~~Gg~IHSID 79 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKML-EEEGCAIHSID 79 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHH-HHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHH-HHcCCeEEeee
Confidence 3557889999998776544 333 4455675 7999999999 69998766554
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=83.65 E-value=3.6 Score=26.88 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=35.3
Q ss_pred HHHHHhcCCCeeEEEEe-----ccCC--EEEEecC-CCHHHHHHHHHHhcCCcEEEcc
Q 037419 14 VRRALLDMQELESHLIE-----KKMC--RVSVSGN-FIPQDLAIKIRKKTNRRVEILE 63 (110)
Q Consensus 14 IekaL~~l~GV~~v~vd-----~~~~--kVtV~g~-~d~~~I~~~I~~k~G~~a~~~~ 63 (110)
+-+.|.+++||..|.+. ..+. +++|+|. +|.++|.++| ++.|-.++.+.
T Consensus 24 ~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~I-E~~Gg~IHSID 80 (97)
T 2raq_A 24 YAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAI-ESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHH-HHTTCEEEEEE
T ss_pred HHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHH-HHcCCeEEeee
Confidence 45678889998866544 3444 4455675 7999999999 69998776554
No 45
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=78.30 E-value=7.6 Score=24.74 Aligned_cols=41 Identities=12% Similarity=0.020 Sum_probs=27.7
Q ss_pred HHHHHHHHhcCCCeeEEEEeccCCEEEEec-CCCHHHHHHHH
Q 037419 11 YRKVRRALLDMQELESHLIEKKMCRVSVSG-NFIPQDLAIKI 51 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~~~~kVtV~g-~~d~~~I~~~I 51 (110)
...|.++|.++|||+-..++...+++.|+- ..+...+.+.+
T Consensus 19 ~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i 60 (95)
T 2jsx_A 19 ISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTI 60 (95)
T ss_dssp HHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHH
T ss_pred HHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHH
Confidence 578999999999995444566678887752 23445554444
No 46
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=77.44 E-value=1.2 Score=28.86 Aligned_cols=30 Identities=17% Similarity=0.417 Sum_probs=23.0
Q ss_pred ccccchhH------HHHHHHHH-hcCCCeeEEEEecc
Q 037419 3 INIDCNGC------YRKVRRAL-LDMQELESHLIEKK 32 (110)
Q Consensus 3 VgM~C~~C------a~kIekaL-~~l~GV~~v~vd~~ 32 (110)
+-++.++| ...|+++| .+++||.+|.|++.
T Consensus 50 ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 50 MTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp ECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred EEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 34556666 56789999 89999999888764
No 47
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=63.98 E-value=9.7 Score=27.79 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=39.1
Q ss_pred cchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEcccccC
Q 037419 6 DCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEF 67 (110)
Q Consensus 6 ~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~~p~ 67 (110)
.|..||.+|-.-|.+-+.|. +.+-. .++--. .-+-.+-+..| ..+|-++.++++.++
T Consensus 110 PC~~CA~~v~~FL~~~~~v~-L~If~--aRLY~~-~~~~~~gLr~L-~~aG~~v~iM~~~ef 166 (203)
T 3v4k_A 110 PCFSCAQEMAKFISKNKHVS-LCIKT--ARIYDD-QGRCQEGLRTL-AEAGAKISIMTYSEF 166 (203)
T ss_pred ChHHHHHHHHHHHhhCCCeE-EEEEE--Eeeccc-CchHHHHHHHH-HHCCCeEEecCHHHH
Confidence 49999999999999999874 33322 122211 22345667777 589999999887664
No 48
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=63.44 E-value=7.2 Score=24.64 Aligned_cols=29 Identities=28% Similarity=0.430 Sum_probs=22.2
Q ss_pred cccchhH------HHHHHHHHhcCCCeeEEEEecc
Q 037419 4 NIDCNGC------YRKVRRALLDMQELESHLIEKK 32 (110)
Q Consensus 4 gM~C~~C------a~kIekaL~~l~GV~~v~vd~~ 32 (110)
.+++++| ...|+++|.+++||.++.+++.
T Consensus 48 ~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 48 TLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp CCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4455555 3678999999999999988753
No 49
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=63.12 E-value=7.2 Score=24.60 Aligned_cols=22 Identities=9% Similarity=0.179 Sum_probs=18.0
Q ss_pred HHHHHHHHhcCCCeeEEEEecc
Q 037419 11 YRKVRRALLDMQELESHLIEKK 32 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~~ 32 (110)
...|+++|..++||.++.+++.
T Consensus 62 ~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 62 LSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp HHHHHHHHHTSSSCCEEEEEEC
T ss_pred HHHHHHHHHhCCCcceEEEEEe
Confidence 3568999999999999988753
No 50
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=60.38 E-value=13 Score=22.98 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=34.5
Q ss_pred cccchhHHHHHHHHHhcCC--CeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQ--ELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~--GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
|+.|+.-.-+++++|.+++ | +.+.|- ++.......|...+ +..|+.+...
T Consensus 8 Gl~CP~Pvl~~kkal~~l~~~G-~~L~V~-------~dd~~a~~dI~~~~-~~~G~~v~~~ 59 (87)
T 3hz7_A 8 GQVCPIPVIRAKKALAELGEAG-GVVTVL-------VDNDISRQNLQKMA-EGMGYQSEYL 59 (87)
T ss_dssp TCCTTHHHHHHHHHHHTTGGGC-CEEEEE-------ESSHHHHHHHHHHH-HHHTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHhccCCC-CEEEEE-------ECCccHHHHHHHHH-HHCCCEEEEE
Confidence 7899999999999999983 4 222221 12222456788888 6999987543
No 51
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=59.97 E-value=2.5 Score=25.84 Aligned_cols=19 Identities=11% Similarity=0.480 Sum_probs=16.7
Q ss_pred cccccchhHHHHHHHHHhc
Q 037419 2 RINIDCNGCYRKVRRALLD 20 (110)
Q Consensus 2 kVgM~C~~Ca~kIekaL~~ 20 (110)
+.|+.|++|...|++.|.+
T Consensus 33 ~aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 33 GVGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp CTTSSSCTTHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHH
Confidence 5789999999999999875
No 52
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=54.83 E-value=37 Score=21.38 Aligned_cols=51 Identities=18% Similarity=0.111 Sum_probs=34.9
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
|+.|+.-.-+++++|.+++.=+.+.|- ++.......|.+.+ +..|+.+...
T Consensus 33 Gl~CP~Pvl~tkkaL~~l~~Ge~L~Vl-------~dd~~a~~dI~~~~-~~~G~~v~~~ 83 (98)
T 1jdq_A 33 GEVCPVPDVETKRALQNMKPGEILEVW-------IDYPMSKERIPETV-KKLGHEVLEI 83 (98)
T ss_dssp SCCSSHHHHHHHHHHHTCCTTCEEEEE-------ESSCTHHHHHHHHH-HHSSCCEEEE
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEEEE-------ECCccHHHHHHHHH-HHCCCEEEEE
Confidence 789999999999999998532222221 12223457788888 6999987654
No 53
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=53.21 E-value=35 Score=20.55 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=34.4
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEEc
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~ 62 (110)
|+.|+.-.-+++++|.+++.=+.+.| .++.......|...+ ++.|+.+...
T Consensus 17 Gl~CP~Pvl~~kkal~~l~~G~~l~V-------~~dd~~a~~di~~~~-~~~G~~~~~~ 67 (82)
T 3lvj_C 17 GLRCPEPVMMVRKTVRNMQPGETLLI-------IADDPATTRDIPGFC-TFMEHELVAK 67 (82)
T ss_dssp TCCTTHHHHHHHHHHHTSCTTCEEEE-------EECCTTHHHHHHHHH-HHTTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHhCCCCCEEEE-------EECCccHHHHHHHHH-HHCCCEEEEE
Confidence 78999999999999999842121222 112223456788888 6999977553
No 54
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=47.11 E-value=6.6 Score=28.40 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=37.7
Q ss_pred cchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCC--HHHHHHHHHHhcCCcEEEcccccC
Q 037419 6 DCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFI--PQDLAIKIRKKTNRRVEILEIHEF 67 (110)
Q Consensus 6 ~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d--~~~I~~~I~~k~G~~a~~~~~~p~ 67 (110)
.|..||.+|-.-|.+.+.|. +.+-.+ .+-.--+ -.+=+..| .++|-++.+.++.++
T Consensus 96 PC~~CA~~va~FL~~~~~v~-L~If~a----RLY~~~~~~~q~gLr~L-~~~G~~v~iM~~~eF 153 (190)
T 3vow_A 96 PCPDCAGEVAEFLARHSNVN-LTIFTA----RLYYFQYPCYQEGLRSL-SQEGVAVEIMDYEDF 153 (190)
T ss_dssp CCHHHHHHHHHHHHHCTTEE-EEEEEE----ECTTTTSHHHHHHHHHH-HHHTCEEEECCHHHH
T ss_pred chHHHHHHHHHHHHhCCCeE-EEEEEE----ecccccCchHHHHHHHH-HHCCCcEEEeChHHH
Confidence 49999999999999998874 333211 1111112 24556777 599999999887654
No 55
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=44.85 E-value=14 Score=26.39 Aligned_cols=53 Identities=17% Similarity=0.296 Sum_probs=36.1
Q ss_pred cchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCH--HHHHHHHHHhcCCcEEEccc
Q 037419 6 DCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIP--QDLAIKIRKKTNRRVEILEI 64 (110)
Q Consensus 6 ~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~--~~I~~~I~~k~G~~a~~~~~ 64 (110)
.|..|+..|-.+|.+.+||..|-+-.. ..+..++ ..-++.| +++|.+++.+..
T Consensus 93 PC~~Ca~aIi~al~~~~gI~rVV~~~~-----d~~~~~p~~~~g~~~L-~~aGI~V~~~~~ 147 (190)
T 2nyt_A 93 PCAACADRIIKTLSKTKNLRLLILVGR-----LFMWEEPEIQAALKKL-KEAGCKLRIMKP 147 (190)
T ss_pred hHHHHHHHHHHhhhhcCCccEEEEEee-----cCCcCChHHHHHHHHH-HHCCCEEEEecH
Confidence 499999999999999999986644211 0010122 3567788 699998887544
No 56
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=39.23 E-value=21 Score=25.21 Aligned_cols=27 Identities=7% Similarity=0.212 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCC
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMC 34 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~ 34 (110)
+||=.-+|..+.+++||.++.+=+..|
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG 35 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGG 35 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESS
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCC
Confidence 478888999999999999999888766
No 57
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=38.74 E-value=74 Score=20.17 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=33.9
Q ss_pred HHHHHHhcCCCee--EEEEeccCCEEEEe---cCC-CHHHHHHHHHHhcCCcEEEc
Q 037419 13 KVRRALLDMQELE--SHLIEKKMCRVSVS---GNF-IPQDLAIKIRKKTNRRVEIL 62 (110)
Q Consensus 13 kIekaL~~l~GV~--~v~vd~~~~kVtV~---g~~-d~~~I~~~I~~k~G~~a~~~ 62 (110)
.+-.+|...|+|. +++.|-..+.+.+. .++ +.+.+...+ .+ ||.++.-
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l-~~-gf~Ve~G 69 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKL-AE-KFNVEQG 69 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHH-HT-TEEEEEC
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHh-hc-CcEEehh
Confidence 3556788889965 67777788888885 233 467778888 45 9988763
No 58
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=37.97 E-value=28 Score=20.56 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=32.7
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVE 60 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~ 60 (110)
|+.|+.-.-+++++|.+++.=+.+.|-. +.......|.+.+ +..|+.+.
T Consensus 13 Gl~CP~Pvl~~k~al~~l~~G~~L~V~~-------dd~~a~~di~~~~-~~~G~~~~ 61 (78)
T 1pav_A 13 GSYCPGPLMELIKAYKQAKVGEVISVYS-------TDAGTKKDAPAWI-QKSGQELV 61 (78)
T ss_dssp SCSSCTTHHHHHHHHTTSCTTCCEECCB-------SSSCHHHHHHHHH-HHHTEEEC
T ss_pred CCCCCHHHHHHHHHHHcCCCCCEEEEEE-------CCccHHHHHHHHH-HHCCCEEE
Confidence 7899999999999999885222222211 1222456788888 69998653
No 59
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=36.20 E-value=51 Score=20.75 Aligned_cols=50 Identities=8% Similarity=-0.039 Sum_probs=33.4
Q ss_pred cccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCCcEEE
Q 037419 4 NIDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 4 gM~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~ 61 (110)
|+.|+.-.-+++++|.+++.=+.+.|- ++.......|...+ +..|+.+..
T Consensus 34 Gl~CP~PvlktkkaL~~l~~Ge~L~Vl-------~dd~~a~~dIp~~~-~~~G~~v~~ 83 (97)
T 1je3_A 34 GEPCPYPAVATLEAMPQLKKGEILEVV-------SDCPQSINNIPLDA-RNHGYTVLD 83 (97)
T ss_dssp CCSSSSSTHHHHHHTTTCCSSCEEEEE-------EBCSSSSCHHHHHH-HHHTCSEEE
T ss_pred CCCCCHHHHHHHHHHHcCCCCCEEEEE-------ECCcchHHHHHHHH-HHCCCEEEE
Confidence 788999999999999998532222221 12223446677778 699998754
No 60
>3ady_A DOTD; 3-layer(BAB) sandwich, MTH1598-like, proton transport; 2.00A {Legionella pneumophila}
Probab=35.48 E-value=29 Score=24.02 Aligned_cols=43 Identities=21% Similarity=0.101 Sum_probs=32.7
Q ss_pred cCCEEEEecCCCHHHHHHHHHHhcCCcEEEcccccCCCCCCCc
Q 037419 32 KMCRVSVSGNFIPQDLAIKIRKKTNRRVEILEIHEFSSNNNNI 74 (110)
Q Consensus 32 ~~~kVtV~g~~d~~~I~~~I~~k~G~~a~~~~~~p~~~~~~~~ 74 (110)
.+++|++.-.-+.+++++.|.+..||+..+.+..|.-+-..++
T Consensus 64 ~~~~vs~dW~Gp~eelL~~LA~~~Gy~f~v~G~rpalPv~I~V 106 (148)
T 3ady_A 64 LQARASVDWSGPIEELTARIAKAAHFRFRVLGKSPSVPVLISI 106 (148)
T ss_dssp GGCEEEEEEEEEHHHHHHHHHHHTTCEEEEESCCCSSCCEEEE
T ss_pred cccEEEEEeeCCHHHHHHHHHHHcCceEEeccCCCCCCceEEE
Confidence 4577777644488999999999999999998888776653333
No 61
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=33.27 E-value=56 Score=22.80 Aligned_cols=35 Identities=9% Similarity=-0.006 Sum_probs=24.2
Q ss_pred CCeeEEEEeccCCEEEEecC-CCHHHHHHHHHHhcCC
Q 037419 22 QELESHLIEKKMCRVSVSGN-FIPQDLAIKIRKKTNR 57 (110)
Q Consensus 22 ~GV~~v~vd~~~~kVtV~g~-~d~~~I~~~I~~k~G~ 57 (110)
+||.++.||+.+++|+|+.. -........+ +++|-
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~~aa~~f~-~~AG~ 149 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGATDAGVDFV-ALSGA 149 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCHHHHHHHH-HHHTC
T ss_pred CCCceEEEeCCCCeEEEEeCCCChHHHHHHH-HHhCC
Confidence 46889999999999999743 2344444444 57774
No 62
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=32.66 E-value=30 Score=25.18 Aligned_cols=27 Identities=11% Similarity=0.223 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCC
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMC 34 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~ 34 (110)
+||=.-+|..+.+++||.++.+=+..|
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG 58 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGG 58 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESS
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCC
Confidence 578888999999999999999888765
No 63
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=31.81 E-value=88 Score=21.78 Aligned_cols=48 Identities=10% Similarity=-0.049 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHH----HHHHHHhcCCcEE
Q 037419 12 RKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDL----AIKIRKKTNRRVE 60 (110)
Q Consensus 12 ~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I----~~~I~~k~G~~a~ 60 (110)
..++..|..+ |-..|..=..+|-|.+++..+++.| .+.|++..|+.+.
T Consensus 25 adLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~~v~ 76 (183)
T 2hiy_A 25 AELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPFIQS 76 (183)
T ss_dssp HHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCCCCC
Confidence 4567777776 7888888899999999876575554 4455457888765
No 64
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=31.65 E-value=32 Score=24.78 Aligned_cols=28 Identities=7% Similarity=0.185 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCCE
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMCR 35 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~k 35 (110)
+||=.-++..+.+++||.++.+=+..|.
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~ 36 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGN 36 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCS
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCc
Confidence 4777888999999999999998877654
No 65
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=29.29 E-value=38 Score=24.49 Aligned_cols=28 Identities=14% Similarity=0.223 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCCE
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMCR 35 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~k 35 (110)
.||=+-+|..+.+++||.++.+=+..+.
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~ 77 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGY 77 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCC
Confidence 4788888999999999999998887765
No 66
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=28.97 E-value=52 Score=17.92 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=16.1
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEec
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd~ 31 (110)
-.|+.| .+++..|.++ |+.-..+|.
T Consensus 9 ~~C~~C-~~~~~~l~~~-~i~~~~~di 33 (75)
T 1r7h_A 9 PACVQC-TATKKALDRA-GLAYNTVDI 33 (75)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEET
T ss_pred CCChHH-HHHHHHHHHc-CCCcEEEEC
Confidence 369999 5677888776 554333443
No 67
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=28.43 E-value=41 Score=24.53 Aligned_cols=27 Identities=15% Similarity=0.109 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCC
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMC 34 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~ 34 (110)
.||=+-+|..+.+++||.++.+=+..+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG 75 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGG 75 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESS
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCC
Confidence 478888899999999999999888755
No 68
>2cpq_A FragIle X mental retardation syndrome related protein 1, isoform B'; KH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=27.50 E-value=1.2e+02 Score=19.03 Aligned_cols=38 Identities=3% Similarity=0.010 Sum_probs=26.3
Q ss_pred HHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHH
Q 037419 13 KVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKI 51 (110)
Q Consensus 13 kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I 51 (110)
+.-+.+.+..|+.+++++-.+++|+|.+. +.+.+.++.
T Consensus 35 k~Ik~I~e~tGv~~IdI~eddG~V~I~g~-~~ea~~~A~ 72 (91)
T 2cpq_A 35 SNIQQARKVPGVTAIELDEDTGTFRIYGE-SADAVKKAR 72 (91)
T ss_dssp HHHHHHHTSTTEEEEEEETTTTEEEEEES-SHHHHHHHH
T ss_pred HHHHHHHHHhCCeEEEEEcCCCEEEEEEC-CHHHHHHHH
Confidence 34455667789976888766799999873 555555555
No 69
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=27.41 E-value=34 Score=19.31 Aligned_cols=26 Identities=8% Similarity=0.372 Sum_probs=16.7
Q ss_pred ccchhHHHHHHHHHhcC----CCeeEEEEec
Q 037419 5 IDCNGCYRKVRRALLDM----QELESHLIEK 31 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l----~GV~~v~vd~ 31 (110)
-.|+.|. +++..|.++ +|+.-..+|.
T Consensus 9 ~~C~~C~-~~~~~l~~l~~~~~~i~~~~vdi 38 (85)
T 1ego_A 9 SGCPYCV-RAKDLAEKLSNERDDFQYQYVDI 38 (85)
T ss_dssp TTSTHHH-HHHHHHHHHHHHHSSCEEEEECH
T ss_pred CCCCCHH-HHHHHHHHHHhcCCCceEEEEec
Confidence 3699994 566677664 5666555554
No 70
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=26.54 E-value=43 Score=21.04 Aligned_cols=21 Identities=5% Similarity=0.112 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCCeeEEEEec
Q 037419 11 YRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~ 31 (110)
...++.++.+++||+++++-.
T Consensus 64 td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 64 TEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp GGHHHHHHTTSCSSEEEEEEE
T ss_pred hHHHHHHHhccCCccEEEEEE
Confidence 357889999999999998754
No 71
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=26.51 E-value=59 Score=18.14 Aligned_cols=24 Identities=25% Similarity=0.576 Sum_probs=15.4
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEe
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIE 30 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd 30 (110)
-.|+.| .+++..|.++ |+.-..+|
T Consensus 9 ~~C~~C-~~~~~~l~~~-~i~~~~vd 32 (81)
T 1h75_A 9 NDCVQC-HATKRAMENR-GFDFEMIN 32 (81)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEE
T ss_pred CCChhH-HHHHHHHHHC-CCCeEEEE
Confidence 359999 5678888775 45433333
No 72
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=25.95 E-value=42 Score=21.22 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=18.0
Q ss_pred HHHHHHHHhcCCCeeEEEEec
Q 037419 11 YRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~ 31 (110)
...++.++.+++||+++++-.
T Consensus 67 tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 67 FDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp HHHHHHHHHHSTTEEEEEEEE
T ss_pred cHHHHHHHhcCCCceEEEEEE
Confidence 578899999999999998753
No 73
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=25.89 E-value=46 Score=25.14 Aligned_cols=28 Identities=14% Similarity=0.224 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHhcCCCeeEEEEeccCCE
Q 037419 8 NGCYRKVRRALLDMQELESHLIEKKMCR 35 (110)
Q Consensus 8 ~~Ca~kIekaL~~l~GV~~v~vd~~~~k 35 (110)
.||=+-+|..+.+++||.++.+=+..|.
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~ 128 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGL 128 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSS
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCC
Confidence 4788889999999999999998887664
No 74
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=25.13 E-value=22 Score=18.08 Aligned_cols=12 Identities=25% Similarity=0.714 Sum_probs=9.4
Q ss_pred ccchhHHHHHHH
Q 037419 5 IDCNGCYRKVRR 16 (110)
Q Consensus 5 M~C~~Ca~kIek 16 (110)
-.|..|+.+|-.
T Consensus 14 qkcaaceqkiaa 25 (32)
T 4g1a_A 14 QKCAACEQKIAA 25 (32)
T ss_dssp HHTSSHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 469999999853
No 75
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=24.81 E-value=58 Score=19.51 Aligned_cols=23 Identities=17% Similarity=0.328 Sum_probs=18.7
Q ss_pred cCCCee--EEEEeccCCEEEEecCC
Q 037419 20 DMQELE--SHLIEKKMCRVSVSGNF 42 (110)
Q Consensus 20 ~l~GV~--~v~vd~~~~kVtV~g~~ 42 (110)
.+||+. ++.|.+..+.++|.|..
T Consensus 14 dlPG~~~edi~V~v~~~~L~I~g~~ 38 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKDGVVEITGKH 38 (85)
T ss_dssp ECTTTCCSEEEEEEETTEEEEEEEE
T ss_pred ECCCCChHHEEEEEECCEEEEEEEE
Confidence 578865 88888899999998753
No 76
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=24.09 E-value=66 Score=22.33 Aligned_cols=22 Identities=9% Similarity=0.129 Sum_probs=18.5
Q ss_pred HHHHHHHHhcCCCeeEEEEecc
Q 037419 11 YRKVRRALLDMQELESHLIEKK 32 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~~ 32 (110)
...+.+.|..++||.+++|.+.
T Consensus 92 egELartI~~i~~V~~ARVhl~ 113 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVSLN 113 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEEE
Confidence 4668899999999999998763
No 77
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=23.97 E-value=62 Score=19.43 Aligned_cols=19 Identities=5% Similarity=-0.015 Sum_probs=16.4
Q ss_pred CCCHHHHHHHHHHhcCCcEE
Q 037419 41 NFIPQDLAIKIRKKTNRRVE 60 (110)
Q Consensus 41 ~~d~~~I~~~I~~k~G~~a~ 60 (110)
.+|++.+++.| ++.||.+.
T Consensus 60 gid~d~l~~~L-~~~g~~~~ 78 (81)
T 2fi0_A 60 GTPMDKIVRTL-EANGYEVI 78 (81)
T ss_dssp TCCHHHHHHHH-HHTTCEEE
T ss_pred CCCHHHHHHHH-HHcCCEee
Confidence 57999999999 69999764
No 78
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=23.94 E-value=1.3e+02 Score=18.41 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=26.8
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCC
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNR 57 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~ 57 (110)
-.|+.| .++++.|.++ ||.--.+|.. ...+...+.+.+.+..|.
T Consensus 25 ~~Cp~C-~~ak~~L~~~-~i~~~~~dvd-------~~~~~~~~~~~l~~~~g~ 68 (114)
T 3h8q_A 25 SYCPHS-TRVKELFSSL-GVECNVLELD-------QVDDGARVQEVLSEITNQ 68 (114)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEETT-------TSTTHHHHHHHHHHHHSC
T ss_pred CCCCcH-HHHHHHHHHc-CCCcEEEEec-------CCCChHHHHHHHHHHhCC
Confidence 469999 6788888886 5543333332 123556666666446665
No 79
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=23.88 E-value=67 Score=22.24 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=17.4
Q ss_pred HHHHHHHHhcCCCeeEEEEec
Q 037419 11 YRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~ 31 (110)
...+.+.|..++||.+++|.+
T Consensus 90 e~ELartI~~i~gV~~ArVhl 110 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVHI 110 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEE
Confidence 456889999999999888755
No 80
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=23.79 E-value=63 Score=21.61 Aligned_cols=31 Identities=23% Similarity=0.241 Sum_probs=24.2
Q ss_pred CEEEEecCCCHHHHHHHHHHhc-CCcEEEcccc
Q 037419 34 CRVSVSGNFIPQDLAIKIRKKT-NRRVEILEIH 65 (110)
Q Consensus 34 ~kVtV~g~~d~~~I~~~I~~k~-G~~a~~~~~~ 65 (110)
.-|.|+|+-|-..+++++ ++. |+++..++..
T Consensus 111 ~~vLvSgD~DF~plv~~l-r~~~G~~V~v~g~~ 142 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERI-QQRYNKKVTVYGVP 142 (165)
T ss_dssp EEEEECCCGGGHHHHHHH-HHHHCCEEEEEECG
T ss_pred EEEEEECChhHHHHHHHH-HHHcCcEEEEEeCC
Confidence 344557878999999999 574 9999988764
No 81
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=23.55 E-value=68 Score=19.59 Aligned_cols=25 Identities=12% Similarity=0.208 Sum_probs=17.6
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEec
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd~ 31 (110)
-.|+.| .++++.|..+ ||.-..+|.
T Consensus 28 ~~Cp~C-~~ak~~L~~~-~i~~~~vdi 52 (109)
T 1wik_A 28 AKCGFS-KQILEILNST-GVEYETFDI 52 (109)
T ss_dssp CCSSTH-HHHHHHHHHT-CSCEEEEES
T ss_pred CCCchH-HHHHHHHHHc-CCCeEEEEC
Confidence 579999 5778888876 565444554
No 82
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=23.21 E-value=1.3e+02 Score=26.11 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=32.6
Q ss_pred HHHHHHHHhcCCCeeEEEEeccCCEEEEe--------cCCCHHHHHHHHH
Q 037419 11 YRKVRRALLDMQELESHLIEKKMCRVSVS--------GNFIPQDLAIKIR 52 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~~~~kVtV~--------g~~d~~~I~~~I~ 52 (110)
+..|++.|.++|||.++.++-....+.|. -.+++++|.++|+
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~ 208 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQ 208 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHH
Confidence 35799999999999999987544555554 2468899999995
No 83
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=22.06 E-value=80 Score=18.15 Aligned_cols=25 Identities=20% Similarity=0.312 Sum_probs=16.2
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEec
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIEK 31 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd~ 31 (110)
-.|+.| ++++..|... |+.-..+|.
T Consensus 14 ~~C~~C-~~~~~~L~~~-~i~~~~~di 38 (92)
T 2khp_A 14 PGCPYC-ARAKALLARK-GAEFNEIDA 38 (92)
T ss_dssp TTCHHH-HHHHHHHHHT-TCCCEEEES
T ss_pred CCChhH-HHHHHHHHHc-CCCcEEEEC
Confidence 369999 5788888875 454333443
No 84
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=21.93 E-value=1.6e+02 Score=18.73 Aligned_cols=46 Identities=9% Similarity=0.037 Sum_probs=31.6
Q ss_pred ccchhHHHHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcCC-cE
Q 037419 5 IDCNGCYRKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTNR-RV 59 (110)
Q Consensus 5 M~C~~Ca~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G~-~a 59 (110)
-.|+.| ++.++.|.+ .||.--.+|+.. ...+.++|...+ .+.|. .+
T Consensus 13 p~C~~c-~ka~~~L~~-~gi~~~~~di~~------~~~~~~eL~~~l-~~~g~~~~ 59 (121)
T 3rdw_A 13 PRCSKS-RETLALVEQ-QGITPQVVLYLE------TPPSVDKLKELL-QQLGFSDA 59 (121)
T ss_dssp TTCHHH-HHHHHHHHT-TTCCCEEECTTT------SCCCHHHHHHHH-HHTTCSSG
T ss_pred CCCHHH-HHHHHHHHH-cCCCcEEEeecc------CCCcHHHHHHHH-HhcCCcCH
Confidence 469999 666777766 467654555543 235788999888 69986 44
No 85
>4ar0_A Type IV pilus biogenesis and competence protein P; transport, secretin type II secretion system; NMR {Neisseria meningitidis}
Probab=21.31 E-value=1.5e+02 Score=19.32 Aligned_cols=50 Identities=8% Similarity=0.013 Sum_probs=33.4
Q ss_pred HHHHHHHhcCCCeeEEEEeccCCEEEEe-cCCCHHHHHHHHHHhcCCcEEE
Q 037419 12 RKVRRALLDMQELESHLIEKKMCRVSVS-GNFIPQDLAIKIRKKTNRRVEI 61 (110)
Q Consensus 12 ~kIekaL~~l~GV~~v~vd~~~~kVtV~-g~~d~~~I~~~I~~k~G~~a~~ 61 (110)
+.+-+.|.+..|..-+--+--+|+|++. .++...+++..|.+..|+....
T Consensus 44 ~~vl~~la~~tg~NiV~d~~V~G~VTl~l~~v~~~~al~~iL~~~gl~~~~ 94 (128)
T 4ar0_A 44 RTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQ 94 (128)
T ss_dssp HHHHHHHHHTTCCEEEECTTCCCEEEEEEEEEEHHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHCCcEEEcCCCCceeeEeecCCCHHHHHHHHHHHcCceEEE
Confidence 4566778888887644333356888885 3456777777776678886654
No 86
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=21.20 E-value=1.5e+02 Score=25.63 Aligned_cols=42 Identities=10% Similarity=0.104 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCeeEEEEeccCCEEEEe--------cCCCHHHHHHHHH
Q 037419 11 YRKVRRALLDMQELESHLIEKKMCRVSVS--------GNFIPQDLAIKIR 52 (110)
Q Consensus 11 a~kIekaL~~l~GV~~v~vd~~~~kVtV~--------g~~d~~~I~~~I~ 52 (110)
...|++.|.++|||.+|.+.-....+.|. -.+++.+|.++|+
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~ 208 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIK 208 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHH
No 87
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.66 E-value=72 Score=18.83 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=25.7
Q ss_pred ccchhHH-----HHHHHHHhcCCCeeEEEEeccCCEEEEecCCCHHHHHHHHHHhcC
Q 037419 5 IDCNGCY-----RKVRRALLDMQELESHLIEKKMCRVSVSGNFIPQDLAIKIRKKTN 56 (110)
Q Consensus 5 M~C~~Ca-----~kIekaL~~l~GV~~v~vd~~~~kVtV~g~~d~~~I~~~I~~k~G 56 (110)
-.|+.|. .++++.|.+. ||.-..+|... ++ ...+.+++.+|
T Consensus 10 ~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~~---------~~-~~~~~l~~~~g 55 (93)
T 1t1v_A 10 SVTGSREIKSQQSEVTRILDGK-RIQYQLVDISQ---------DN-ALRDEMRTLAG 55 (93)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETTS---------CH-HHHHHHHHHTT
T ss_pred CCCCCchhhHHHHHHHHHHHHC-CCceEEEECCC---------CH-HHHHHHHHHhC
Confidence 3699998 8889988875 56544455432 23 44455545667
No 88
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=20.27 E-value=1.5e+02 Score=17.72 Aligned_cols=28 Identities=4% Similarity=-0.122 Sum_probs=17.4
Q ss_pred ccchhHHH---HHHHHHhcCCCeeEEEEecc
Q 037419 5 IDCNGCYR---KVRRALLDMQELESHLIEKK 32 (110)
Q Consensus 5 M~C~~Ca~---kIekaL~~l~GV~~v~vd~~ 32 (110)
-.|+.|.. .+++.....+++.-+.+|..
T Consensus 41 ~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d 71 (116)
T 3qfa_C 41 TWCGPSKMIKPFFHSLSEKYSNVIFLEVDVD 71 (116)
T ss_dssp TTCHHHHHHHHHHHHHHTTCTTSEEEEEETT
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 36999965 34444455677766666654
Done!