BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037420
         (72 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2VO4|A Chain A, Glutathione Transferase From Glycine Max
 pdb|2VO4|B Chain B, Glutathione Transferase From Glycine Max
 pdb|3FHS|A Chain A, Glutathione Transferase From Glycine Max At 2.7 Resolution
 pdb|3FHS|B Chain B, Glutathione Transferase From Glycine Max At 2.7 Resolution
          Length = 219

 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 47/70 (67%)

Query: 3   EEVTKELIEILKTLQEELGDDPHFGEKMFGFVDVAFIPFYCWFHSYETLGQFIFETEWPK 62
           E   KE IE LK L+E+LGD  +FG    GFVD+A +PFY WF +YET G    E+E PK
Sbjct: 122 EAAKKEFIEALKLLEEQLGDKTYFGGDNLGFVDIALVPFYTWFKAYETFGTLNIESECPK 181

Query: 63  IIAWAKRCKQ 72
            IAWAKRC Q
Sbjct: 182 FIAWAKRCLQ 191


>pdb|1OYJ|A Chain A, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
           Complex With Glutathione.
 pdb|1OYJ|B Chain B, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
           Complex With Glutathione.
 pdb|1OYJ|C Chain C, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
           Complex With Glutathione.
 pdb|1OYJ|D Chain D, Crystal Structure Solution Of Rice Gst1 (Osgstu1) In
           Complex With Glutathione
          Length = 231

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 7   KELIEILKTLQEELGDDPHFGEKMFGF---VDVAFIPFYCWFHSYETLGQFIFETEWPKI 63
           +E+ EIL+TL+ ELGD   FG    G    VDVA +PF  WF+SYE  G F  E   P++
Sbjct: 135 REMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRL 194

Query: 64  IAWAKRC 70
            AWA+RC
Sbjct: 195 AAWARRC 201


>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
           Member From Ricinus Communis, Target Efi-501866
          Length = 223

 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 1   QLEEVTKELIEILKTLQEE---LGDDPHFGEKMFGFVDVAFIPFYCWFHSYETL-GQFIF 56
           +LE+  K  +E+LKT++E    + DD +FG    G VD+AF     W    E + G  + 
Sbjct: 118 ELEKAVKNCLEVLKTIEEHAMGVSDDKYFGGDKIGIVDIAFCGIAHWLGVIEEVAGVKVL 177

Query: 57  ETE-WPKIIAWAKRCKQ 72
           E++ +P++ AW +  K+
Sbjct: 178 ESQKFPRLHAWTENFKE 194


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.326    0.143    0.477 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,349,404
Number of Sequences: 62578
Number of extensions: 83668
Number of successful extensions: 398
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 393
Number of HSP's gapped (non-prelim): 3
length of query: 72
length of database: 14,973,337
effective HSP length: 42
effective length of query: 30
effective length of database: 12,345,061
effective search space: 370351830
effective search space used: 370351830
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)