Query 037425
Match_columns 141
No_of_seqs 115 out of 1027
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:49:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.1E-33 1E-37 231.2 14.6 138 2-141 3-141 (439)
2 2e1v_A Acyl transferase; BAHD 100.0 2.1E-28 7.2E-33 202.7 9.8 140 1-141 1-153 (454)
3 2bgh_A Vinorine synthase; VS, 100.0 8E-28 2.7E-32 197.8 12.9 131 5-141 3-143 (421)
4 2xr7_A Malonyltransferase; xen 99.9 8.3E-28 2.9E-32 198.9 9.1 134 7-141 2-148 (453)
5 2rkv_A Trichothecene 3-O-acety 99.7 3.1E-18 1.1E-22 141.1 8.0 116 26-141 4-140 (451)
6 1q9j_A PAPA5, polyketide synth 41.8 84 0.0029 23.9 7.0 63 25-91 6-70 (422)
7 2joz_A Hypothetical protein YX 33.4 25 0.00086 23.4 2.2 29 66-94 78-106 (135)
8 2kl8_A OR15; structural genomi 32.1 62 0.0021 19.6 3.7 38 55-92 10-48 (85)
9 3u5c_Q RP61R, 40S ribosomal pr 27.5 23 0.00079 24.6 1.3 18 56-73 77-94 (143)
10 1txy_A Primosomal replication 27.2 52 0.0018 21.0 3.0 24 74-101 7-33 (104)
11 2npb_A Selenoprotein W; struct 22.8 31 0.0011 22.2 1.2 18 75-92 37-54 (96)
12 1apy_B Aspartylglucosaminidase 22.2 1.9E+02 0.0064 19.8 5.2 46 56-101 77-127 (141)
13 4hhu_A OR280; engineered prote 21.5 93 0.0032 21.1 3.4 38 55-92 92-130 (170)
14 3j20_K 30S ribosomal protein S 20.7 41 0.0014 23.1 1.5 18 56-73 74-91 (135)
15 3koj_A Uncharacterized protein 20.6 83 0.0029 20.4 3.0 25 74-102 16-44 (108)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.1e-33 Score=231.22 Aligned_cols=138 Identities=22% Similarity=0.306 Sum_probs=117.8
Q ss_pred CCCcceEEEeeEEEeCCCCCCCCceeeCCccccccccccceEEEEecCCCC-CCchHHHHHHHHHhhchhcccCCceeee
Q 037425 2 VNDLLIHSIRLSSVGPGKATGSDVVHELSGMDLAMKLHYLKGFYIFRSHAV-QGLSVKLIKESTFYLFNNYYWTCARLRR 80 (141)
Q Consensus 2 ~~~~~V~i~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~v~fy~~~~~-~~~~~~~Lk~sLa~~L~~fyplAGRl~~ 80 (141)
|..|+|+|.++++|+|+.+++. ++++||+||+.+..+|++.+|||+.+.. ..+.+++||+||+++|++||||||||+.
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp~-~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~~f~plAGRl~~ 81 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETPG-RNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFYPMAGRLKR 81 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCCC-CEECCCHHHHSCCTTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTTTTGGGGCEEEE
T ss_pred CCceEEEEeeeEEEeCCCCCCC-CeecCChhHhCccccceeeEEEEcCCCCccccHHHHHHHHHHHHHhhccccceeeee
Confidence 3468899999999999999976 8999999999877889999999987432 2357999999999999999999999999
Q ss_pred CCCCCeEEEeCCCCcEEEEEEcCCChHHHhcCCCCCCccccccccCCCCCCCCCCCceeeC
Q 037425 81 SDSGRPYLKCNDCGARFVEAQCDKTVDELLEMGDYSSFPNLLVYHQPIGPDLAFSPPIYLQ 141 (141)
Q Consensus 81 ~~~g~~~i~cn~~Gv~fv~A~~~~~l~~l~~~~~~~~~~~~l~p~~~~~~~~~~~pll~vQ 141 (141)
+++|+++|+|||+||.|+||+++++++|+++..+.+.+++ |+|..+...+....|+|.+|
T Consensus 82 ~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~-l~p~~~~~~~~~~~pll~vQ 141 (439)
T 4g22_A 82 DEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRR-LIPAVDYSQGISSYALLVLQ 141 (439)
T ss_dssp CTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGG-GSCCCCTTSCTTSSCSEEEE
T ss_pred CCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHh-cCCCCCcccccccCceeEEE
Confidence 9889999999999999999999999999977655557787 88865544445578999998
No 2
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=99.95 E-value=2.1e-28 Score=202.68 Aligned_cols=140 Identities=18% Similarity=0.177 Sum_probs=108.3
Q ss_pred CCCCcceEEEeeEEEeCCCCCCCCceeeCCcccccc-ccccceEEEEecCCCC-C---CchHHHHHHHHHhhchhcccCC
Q 037425 1 MVNDLLIHSIRLSSVGPGKATGSDVVHELSGMDLAM-KLHYLKGFYIFRSHAV-Q---GLSVKLIKESTFYLFNNYYWTC 75 (141)
Q Consensus 1 m~~~~~V~i~~~~~V~P~~~~~~~~~~~LS~lD~~~-~~~~~~~v~fy~~~~~-~---~~~~~~Lk~sLa~~L~~fyplA 75 (141)
|.+..+|+|+++++|+|+.+++++++++||+||+.. ..+|++.+|||+.+.. . ...+++||+||+++|++|||||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plA 80 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFV 80 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccc
Confidence 677789999999999999875545899999999974 3569999999986432 1 1368999999999999999999
Q ss_pred ceee-eC-CCCCeEEEeC-CCCcEEEEEEcCCChHHHhcCCC--CCCccccccccCCCCC---CCCCCCceeeC
Q 037425 76 ARLR-RS-DSGRPYLKCN-DCGARFVEAQCDKTVDELLEMGD--YSSFPNLLVYHQPIGP---DLAFSPPIYLQ 141 (141)
Q Consensus 76 GRl~-~~-~~g~~~i~cn-~~Gv~fv~A~~~~~l~~l~~~~~--~~~~~~~l~p~~~~~~---~~~~~pll~vQ 141 (141)
|||+ .+ ++|+++|+|| ++||.|+||+++.+++++....+ .+.+++ |+|..+... +..+.|++.+|
T Consensus 81 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~-l~p~~~~~~~~~~~~~~pll~vQ 153 (454)
T 2e1v_A 81 GKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYD-LVPILGESTRLSDCIKIPLFSVQ 153 (454)
T ss_dssp SEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGG-GSCCCCCCEECSSCEEEECEEEE
T ss_pred eeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhc-CCCCCCCcccccccccCceEEEE
Confidence 9998 65 6799999999 59999999999999999975432 335676 887644221 12345899988
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=99.95 E-value=8e-28 Score=197.84 Aligned_cols=131 Identities=14% Similarity=0.194 Sum_probs=107.3
Q ss_pred cceEEEeeEEEeCCCCCCC-CceeeCCccccccccccceEEEEecCCCCC----CchHHHHHHHHHhhchhcccCCceee
Q 037425 5 LLIHSIRLSSVGPGKATGS-DVVHELSGMDLAMKLHYLKGFYIFRSHAVQ----GLSVKLIKESTFYLFNNYYWTCARLR 79 (141)
Q Consensus 5 ~~V~i~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~v~fy~~~~~~----~~~~~~Lk~sLa~~L~~fyplAGRl~ 79 (141)
|+|+|.++++|+|+.||+. .++++||+||+.....|++.+|||+.+... ...+++||+||+++|++||||||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 7799999999999999876 359999999997667899999999864321 13789999999999999999999996
Q ss_pred eCCCCCeEEEeCCCCcEEEEEEcCCChHHHhcCCCCC-CccccccccCCCCCC----CCCCCceeeC
Q 037425 80 RSDSGRPYLKCNDCGARFVEAQCDKTVDELLEMGDYS-SFPNLLVYHQPIGPD----LAFSPPIYLQ 141 (141)
Q Consensus 80 ~~~~g~~~i~cn~~Gv~fv~A~~~~~l~~l~~~~~~~-~~~~~l~p~~~~~~~----~~~~pll~vQ 141 (141)
. +++|+||++||.|+||+++++++|+.+..+.. .+++ |+|... ..+ ....|++.+|
T Consensus 83 ~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~-l~p~~~-~~~~~~~~~~~pll~vQ 143 (421)
T 2bgh_A 83 V----NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQ-YLPSAA-YPGGKIEVNEDVPLAVK 143 (421)
T ss_dssp T----TTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGG-GSSSCS-SSSSSSCCCTTCSEEEE
T ss_pred C----CcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHh-cCCCCC-CccccccccCCceEEEE
Confidence 2 69999999999999999999999998653433 5666 777542 222 4468999998
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=99.94 E-value=8.3e-28 Score=198.89 Aligned_cols=134 Identities=15% Similarity=0.231 Sum_probs=107.9
Q ss_pred eEEEeeEEEeCCCCCCCCceeeCCcccccc-ccccceEEEEecCCCCC----CchHHHHHHHHHhhchhcccCCceeeeC
Q 037425 7 IHSIRLSSVGPGKATGSDVVHELSGMDLAM-KLHYLKGFYIFRSHAVQ----GLSVKLIKESTFYLFNNYYWTCARLRRS 81 (141)
Q Consensus 7 V~i~~~~~V~P~~~~~~~~~~~LS~lD~~~-~~~~~~~v~fy~~~~~~----~~~~~~Lk~sLa~~L~~fyplAGRl~~~ 81 (141)
|+|+++++|+|+.+++++++++||+||+.. ..+|++.+|||+.+... ...+++||+||+++|++||||||||+.+
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~ 81 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACP 81 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEE
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEcc
Confidence 899999999999875555899999999974 35699999999864321 1368999999999999999999999988
Q ss_pred C--CCCeEEEeC-CCCcEEEEEEcCCChHHHhcCC--CCCCccccccccCCCCCC---CCCCCceeeC
Q 037425 82 D--SGRPYLKCN-DCGARFVEAQCDKTVDELLEMG--DYSSFPNLLVYHQPIGPD---LAFSPPIYLQ 141 (141)
Q Consensus 82 ~--~g~~~i~cn-~~Gv~fv~A~~~~~l~~l~~~~--~~~~~~~~l~p~~~~~~~---~~~~pll~vQ 141 (141)
+ +|+++|+|| ++||.|+||+++.+++++.... +.+.+++ |+|..+...+ ..+.|++.+|
T Consensus 82 ~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~-l~p~~~~~~~~~~~~~~pll~vQ 148 (453)
T 2xr7_A 82 QDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYH-FVPQLAEPKDAPGVQLAPVLAIQ 148 (453)
T ss_dssp SSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGG-GSCCCCCCEEETTEEECCCEEEE
T ss_pred CCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhc-CCCCCCCcccccccccCCeEEEE
Confidence 6 899999999 5999999999999999997543 3335676 8876442211 1127999988
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.74 E-value=3.1e-18 Score=141.14 Aligned_cols=116 Identities=14% Similarity=0.168 Sum_probs=84.2
Q ss_pred eeeCCcccccc--ccccceEEEEecCCCC--CCchHHHHHHHHHhhchhcccCCceeeeCC-----CCCeEEEeCCCCcE
Q 037425 26 VHELSGMDLAM--KLHYLKGFYIFRSHAV--QGLSVKLIKESTFYLFNNYYWTCARLRRSD-----SGRPYLKCNDCGAR 96 (141)
Q Consensus 26 ~~~LS~lD~~~--~~~~~~~v~fy~~~~~--~~~~~~~Lk~sLa~~L~~fyplAGRl~~~~-----~g~~~i~cn~~Gv~ 96 (141)
.++||++|+.. ...|++.+|||+.+.. ....+++||+||+++|++||||||||+.++ +|+++|+|++.|+.
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~ 83 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPR 83 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCe
Confidence 46899999986 5789999999985321 124689999999999999999999998864 58999999887777
Q ss_pred EEEEEcCC-----ChHHHhcC-CCCCCccc-cccccC--CCC---CCCCCCCceeeC
Q 037425 97 FVEAQCDK-----TVDELLEM-GDYSSFPN-LLVYHQ--PIG---PDLAFSPPIYLQ 141 (141)
Q Consensus 97 fv~A~~~~-----~l~~l~~~-~~~~~~~~-~l~p~~--~~~---~~~~~~pll~vQ 141 (141)
|++|.++. +++++... .+.+.+.. .+.|.. +.. ......|++.+|
T Consensus 84 ~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQ 140 (451)
T 2rkv_A 84 VVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQ 140 (451)
T ss_dssp EEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEE
T ss_pred EEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEE
Confidence 99999875 68888643 23222221 133321 111 122358999998
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=41.82 E-value=84 Score=23.93 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=42.7
Q ss_pred ceeeCCccccccc-c-ccceEEEEecCCCCCCchHHHHHHHHHhhchhcccCCceeeeCCCCCeEEEeC
Q 037425 25 VVHELSGMDLAMK-L-HYLKGFYIFRSHAVQGLSVKLIKESTFYLFNNYYWTCARLRRSDSGRPYLKCN 91 (141)
Q Consensus 25 ~~~~LS~lD~~~~-~-~~~~~v~fy~~~~~~~~~~~~Lk~sLa~~L~~fyplAGRl~~~~~g~~~i~cn 91 (141)
..++||.+...+- . +.+...+-++.+ .+.++|++|+.+++..++.|--|+...+++...+...
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~----ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~ 70 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV----IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVAD 70 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC----CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEEC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC----CCHHHHHHHHHHHHHhCccceEEEEecCCcceeeecc
Confidence 5788998877432 2 223334434332 3589999999999999999999998765444444443
No 7
>2joz_A Hypothetical protein YXEF; structure, GFT, NESG, lipoprotein, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis} SCOP: b.60.1.1
Probab=33.40 E-value=25 Score=23.38 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=24.9
Q ss_pred hhchhcccCCceeeeCCCCCeEEEeCCCC
Q 037425 66 YLFNNYYWTCARLRRSDSGRPYLKCNDCG 94 (141)
Q Consensus 66 ~~L~~fyplAGRl~~~~~g~~~i~cn~~G 94 (141)
+-|.+|||+-..|.+.++|.+...-|++-
T Consensus 78 qylg~~~p~kstlkrg~n~tliw~~~g~t 106 (135)
T 2joz_A 78 QYLGPYYPLKSTLKRGENGTLIWEQNGQR 106 (135)
T ss_dssp EEESTTCSCEEEEEECSTTCEEEEETTEE
T ss_pred EEcCCCcchhhHHhCCCCCcEEEEecCCe
Confidence 46889999999999999998888888764
No 8
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=32.06 E-value=62 Score=19.57 Aligned_cols=38 Identities=0% Similarity=-0.091 Sum_probs=30.1
Q ss_pred chHHHHHHHHHhhchhcccCCceeeeCCC-CCeEEEeCC
Q 037425 55 LSVKLIKESTFYLFNNYYWTCARLRRSDS-GRPYLKCND 92 (141)
Q Consensus 55 ~~~~~Lk~sLa~~L~~fyplAGRl~~~~~-g~~~i~cn~ 92 (141)
++.+.+..+|-+....-.-|||.+...-+ +.++|...+
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 35788888888888888999999988644 468887764
No 9
>3u5c_Q RP61R, 40S ribosomal protein S16-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_I 3o30_J 3o2z_J 3u5g_Q 1s1h_I 3jyv_I*
Probab=27.47 E-value=23 Score=24.62 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=16.3
Q ss_pred hHHHHHHHHHhhchhccc
Q 037425 56 SVKLIKESTFYLFNNYYW 73 (141)
Q Consensus 56 ~~~~Lk~sLa~~L~~fyp 73 (141)
...+++.++|+||+.||+
T Consensus 77 QA~AiR~aIArAL~~~~~ 94 (143)
T 3u5c_Q 77 QVYAIRQAIAKGLVAYHQ 94 (143)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhh
Confidence 588999999999999975
No 10
>1txy_A Primosomal replication protein N; OB fold, dimer, DNA binding protein; 2.00A {Escherichia coli} SCOP: b.40.4.3 PDB: 1woc_A 2pnh_A 4apv_A
Probab=27.19 E-value=52 Score=20.96 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=17.0
Q ss_pred CCceeeeCCCCCeEEEeCCCCc---EEEEEE
Q 037425 74 TCARLRRSDSGRPYLKCNDCGA---RFVEAQ 101 (141)
Q Consensus 74 lAGRl~~~~~g~~~i~cn~~Gv---~fv~A~ 101 (141)
|.|||..+ +++.+...|. .|..|.
T Consensus 7 L~G~l~~d----pelR~t~~G~~v~~f~lA~ 33 (104)
T 1txy_A 7 LSGTVCRA----PLRKVSPSGIPHCQFVLEH 33 (104)
T ss_dssp EEEEEEEE----EEEEECTTSCEEEEEEEEE
T ss_pred EEEEECCC----ceEEECCCCCEEEEEEEEE
Confidence 67999876 7888887774 455554
No 11
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=22.77 E-value=31 Score=22.20 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=12.5
Q ss_pred CceeeeCCCCCeEEEeCC
Q 037425 75 CARLRRSDSGRPYLKCND 92 (141)
Q Consensus 75 AGRl~~~~~g~~~i~cn~ 92 (141)
.|.+.....|.++|.+||
T Consensus 37 ~~~l~p~~~G~FEV~vng 54 (96)
T 2npb_A 37 CGEGTPQVTGFFEVTVAG 54 (96)
T ss_dssp EECCCSSCCSCCEEEETT
T ss_pred EEEEcCCCCcEEEEEECC
Confidence 344444456999999986
No 12
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=22.15 E-value=1.9e+02 Score=19.83 Aligned_cols=46 Identities=11% Similarity=0.023 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhhchhccc-CCceeeeCCCCCeEEEeCC----CCcEEEEEE
Q 037425 56 SVKLIKESTFYLFNNYYW-TCARLRRSDSGRPYLKCND----CGARFVEAQ 101 (141)
Q Consensus 56 ~~~~Lk~sLa~~L~~fyp-lAGRl~~~~~g~~~i~cn~----~Gv~fv~A~ 101 (141)
+-+..++++.+....|.- ..|-+..+.+|++-+.||. .+-.|+.+.
T Consensus 77 ~~~A~~~~i~~~~~~~~~~~ggvIa~d~~G~~~~~~n~~~~~~~F~~~v~~ 127 (141)
T 1apy_B 77 PTIACQKVISRIQKHFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYN 127 (141)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEEETTSCEEEEECCBTTBCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCEEEEeccCCCCCCeeEEEEc
Confidence 456677777766666653 4455777889999999997 355555554
No 13
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=21.47 E-value=93 Score=21.14 Aligned_cols=38 Identities=5% Similarity=-0.041 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhhchhcccCCceeeeCCC-CCeEEEeCC
Q 037425 55 LSVKLIKESTFYLFNNYYWTCARLRRSDS-GRPYLKCND 92 (141)
Q Consensus 55 ~~~~~Lk~sLa~~L~~fyplAGRl~~~~~-g~~~i~cn~ 92 (141)
++.+.+..+|-+....-.-|||.+...-+ ++++|...+
T Consensus 92 ddlea~ekalkemirqarkfagtvtytl~gn~l~i~itg 130 (170)
T 4hhu_A 92 DDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 130 (170)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEES
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 46899999999999999999999988644 578887764
No 14
>3j20_K 30S ribosomal protein S9P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.69 E-value=41 Score=23.09 Aligned_cols=18 Identities=0% Similarity=-0.103 Sum_probs=16.3
Q ss_pred hHHHHHHHHHhhchhccc
Q 037425 56 SVKLIKESTFYLFNNYYW 73 (141)
Q Consensus 56 ~~~~Lk~sLa~~L~~fyp 73 (141)
...+++.++|++|+.|++
T Consensus 74 QA~AiR~aIarAL~~~~~ 91 (135)
T 3j20_K 74 QAEAARMAIARALVEWTG 91 (135)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHHHHhcc
Confidence 588999999999999974
No 15
>3koj_A Uncharacterized protein YCF41; single-strand binding protein family, PF00436, SNR59A, NESG, structural genomics, PSI-2; 1.90A {Synechococcus elongatus pcc 6301}
Probab=20.56 E-value=83 Score=20.44 Aligned_cols=25 Identities=20% Similarity=0.131 Sum_probs=17.4
Q ss_pred CCceeeeCCCCCeEEEeCCCC----cEEEEEEc
Q 037425 74 TCARLRRSDSGRPYLKCNDCG----ARFVEAQC 102 (141)
Q Consensus 74 lAGRl~~~~~g~~~i~cn~~G----v~fv~A~~ 102 (141)
|-|||..+ +++.+...| +.|..|..
T Consensus 16 LiGrL~~D----PelR~t~~g~~~va~f~lAv~ 44 (108)
T 3koj_A 16 LQATVVEA----PQLRYAQDNQTPVAEMVVQFP 44 (108)
T ss_dssp EEEEEEEE----EEEEECTTSSSEEEEEEEEEC
T ss_pred EEEEECCC----CEEEEeCCCCEEEEEEEEEEC
Confidence 56999886 788887666 35556654
Done!