Query 037428
Match_columns 158
No_of_seqs 107 out of 226
Neff 3.1
Searched_HMMs 46136
Date Fri Mar 29 12:08:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037428.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037428hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF02320 UCR_hinge: Ubiquinol- 100.0 9.6E-32 2.1E-36 187.5 3.3 63 96-158 1-65 (65)
2 KOG4763 Ubiquinol-cytochrome c 99.9 3.2E-28 7E-33 175.7 4.8 70 89-158 6-77 (77)
3 PF05254 UPF0203: Uncharacteri 90.6 0.22 4.8E-06 35.3 2.4 41 108-148 7-52 (68)
4 KOG3481 Uncharacterized conser 89.4 0.33 7.1E-06 36.6 2.6 42 108-149 11-57 (87)
5 PLN03079 Uncharacterized prote 86.6 0.55 1.2E-05 35.5 2.3 42 108-149 16-62 (91)
6 PF09862 DUF2089: Protein of u 73.7 2.8 6.2E-05 32.5 2.3 59 27-85 2-79 (113)
7 PF10200 Ndufs5: NADH:ubiquino 64.9 4.9 0.00011 30.5 2.0 39 108-147 31-69 (96)
8 PF02862 DDHD: DDHD domain; I 61.8 0.49 1.1E-05 38.0 -4.2 32 38-72 52-83 (227)
9 TIGR03515 GldC gliding motilit 52.1 37 0.0008 26.6 4.9 61 35-107 38-98 (108)
10 PF05811 DUF842: Eukaryotic pr 47.5 14 0.00031 28.5 2.0 38 119-158 83-128 (131)
11 PF03469 XH: XH domain; Inter 34.9 52 0.0011 26.2 3.4 50 32-81 27-91 (132)
12 PF08583 Cmc1: Cytochrome c ox 30.2 37 0.00081 22.4 1.6 53 100-154 3-55 (69)
13 PF10671 TcpQ: Toxin co-regula 28.7 33 0.00071 24.1 1.2 30 38-70 27-57 (84)
14 COG5050 EPT1 sn-1,2-diacylglyc 26.5 26 0.00056 32.5 0.5 27 122-150 98-124 (384)
15 PF14233 DUF4335: Domain of un 25.7 29 0.00062 28.5 0.6 17 135-151 117-133 (189)
16 PF08262 Lem_TRP: Leucophaea m 25.1 30 0.00066 16.9 0.4 7 27-33 2-8 (10)
No 1
>PF02320 UCR_hinge: Ubiquinol-cytochrome C reductase hinge protein; InterPro: IPR023184 The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is a respiratory multienzyme complex []. The bc1 complex contains 11 subunits; 3 respiratory subunits (cytochrome B, cytochrome C1, Rieske protein), 2 core proteins and 6 low molecular weight proteins. This family represents the 'hinge' protein of the complex which is thought to mediate formation of the cytochrome c1 and cytochrome c complex. Proteins in this entry from an alpha-helical hairpin. This entry represents the structural domain found in these proteins.; PDB: 1BCC_H 1SQP_H 1SQB_H 1BE3_H 2A06_U 1L0L_H 2BCC_H 2FYU_H 1PPJ_U 2YBB_H ....
Probab=99.97 E-value=9.6e-32 Score=187.51 Aligned_cols=63 Identities=44% Similarity=0.911 Sum_probs=57.2
Q ss_pred CChHHHHHHHh--hhhCcchHHHHHHHHhhhcCCCCCCCCchhhhhhhhhhhhhhhhhHHhhhhC
Q 037428 96 VDQKKYFEEAC--KPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAVKLFQKLK 158 (158)
Q Consensus 96 vDPk~~LREeC--~~kC~k~k~~YdeCvERV~s~~~tkE~CveEfFDllHCVDhCVAPKLF~kLK 158 (158)
|||++.||++| .++|++++++|++|++||+++++++|||+||||||+|||||||||+||++||
T Consensus 1 VDp~~~lre~C~~~~~C~~~~~~y~~C~eRV~~~~~~~e~C~ee~fd~~hCvD~CvapklF~~LK 65 (65)
T PF02320_consen 1 VDPKDALREECKETPKCAKLKHHYDECVERVNSRSETKEDCVEEYFDLVHCVDHCVAPKLFKKLK 65 (65)
T ss_dssp --HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHCSSSSG-SHHHHHHHHHHHHHHHHHHHGGC--
T ss_pred CCchHHHHHHhccchhhHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHhhhHHHHHhcC
Confidence 79999999999 5999999999999999999999999999999999999999999999999998
No 2
>KOG4763 consensus Ubiquinol-cytochrome c reductase hinge protein [Energy production and conversion]
Probab=99.94 E-value=3.2e-28 Score=175.65 Aligned_cols=70 Identities=63% Similarity=1.211 Sum_probs=67.2
Q ss_pred CccccccCChHHHHHHHhh--hhCcchHHHHHHHHhhhcCCCCCCCCchhhhhhhhhhhhhhhhhHHhhhhC
Q 037428 89 ERADEELVDQKKYFEEACK--PKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAVKLFQKLK 158 (158)
Q Consensus 89 ~meEEE~vDPk~~LREeC~--~kC~k~k~~YdeCvERV~s~~~tkE~CveEfFDllHCVDhCVAPKLF~kLK 158 (158)
+|++|..+||+..+||.|+ ++|.+....|++|++||++++.|++||+|||||||||+|||||||||++||
T Consensus 6 ee~~E~vvDplt~~rE~C~~~~kcvK~~~~l~~C~~rv~s~s~tee~Ct~e~fDy~h~~DhCva~KlFa~LK 77 (77)
T KOG4763|consen 6 EEPEELVVDPLTYVRESCKQLPKCVKPLLELQACVKRVQSRSSTEEHCTGEYFDYWHCLDHCVAPKLFANLK 77 (77)
T ss_pred hcchhhhccHHHHHHHHHHhhHHHhhHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 5667778899999999999 999999999999999999999999999999999999999999999999998
No 3
>PF05254 UPF0203: Uncharacterised protein family (UPF0203); InterPro: IPR007918 This is a family of small highly conserved proteins. In Saccharomyces cerevisiae (Baker's yeast) the gene YKL053C-A (MDM35) O60200 from SWISSPROT is one of the genes essential for maintenance of normal mitochondrial distribution and morphology (MDM) []; wherease in Homo sapiens (Human), p53CSV, O43715 from SWISSPROT is a direct transcriptional target for p53 and appears to be a cell-survival mediator in response to genotoxic stress including low-levels of DNA damage. It is suggested that p53CSV modulates the apoptotic pathway through interaction with HSP70 and Apaf-1 thereby inhibiting activation of procaspase-3 and procaspase-9 [].
Probab=90.59 E-value=0.22 Score=35.28 Aligned_cols=41 Identities=22% Similarity=0.631 Sum_probs=32.9
Q ss_pred hhCcchHHHHHHHHhhhc-----CCCCCCCCchhhhhhhhhhhhhh
Q 037428 108 PKCVKPLLEYQACVKRIQ-----GDESGHKHCTGQYFDYWSCIDKC 148 (158)
Q Consensus 108 ~kC~k~k~~YdeCvERV~-----s~~~tkE~CveEfFDllHCVDhC 148 (158)
|.|.+++..|+.|-.+== .+......|..+|-+|..||..=
T Consensus 7 ~eC~~lK~~YD~CFn~WfsekfLkG~~~~~~C~~~~~~Y~~Cv~~a 52 (68)
T PF05254_consen 7 PECTELKEKYDQCFNKWFSEKFLKGDSSDNECGELFKEYQQCVQKA 52 (68)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 789999999999987742 23444579999999999998653
No 4
>KOG3481 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.43 E-value=0.33 Score=36.56 Aligned_cols=42 Identities=21% Similarity=0.592 Sum_probs=35.2
Q ss_pred hhCcchHHHHHHHHhh-----hcCCCCCCCCchhhhhhhhhhhhhhh
Q 037428 108 PKCVKPLLEYQACVKR-----IQGDESGHKHCTGQYFDYWSCIDKCV 149 (158)
Q Consensus 108 ~kC~k~k~~YdeCvER-----V~s~~~tkE~CveEfFDllHCVDhCV 149 (158)
+.|.+++..|+.|-.+ +.++....+.|+.++-+|..||..=.
T Consensus 11 ~eCt~lk~~YD~CFn~Wf~eKflKG~~~~~pC~~l~k~Y~~Cv~kal 57 (87)
T KOG3481|consen 11 PECTDLKQKYDQCFNEWFSEKFLKGDSSGEPCSRLFKVYKQCVQKAL 57 (87)
T ss_pred ccchHHHHHHHHHHHHHHHHHhcCCccccCcHHHHHHHHHHHHHHHH
Confidence 6899999999999655 45566788999999999999987644
No 5
>PLN03079 Uncharacterized protein At4g33100; Provisional
Probab=86.63 E-value=0.55 Score=35.55 Aligned_cols=42 Identities=17% Similarity=0.563 Sum_probs=32.8
Q ss_pred hhCcchHHHHHHHHhhhc-----CCCCCCCCchhhhhhhhhhhhhhh
Q 037428 108 PKCVKPLLEYQACVKRIQ-----GDESGHKHCTGQYFDYWSCIDKCV 149 (158)
Q Consensus 108 ~kC~k~k~~YdeCvERV~-----s~~~tkE~CveEfFDllHCVDhCV 149 (158)
+.|..++..|+.|=.|== ++...+..|.+++-.|.+||..=.
T Consensus 16 ~eCtelK~~YD~CFN~WYsEkFLKG~~~~~eC~~~w~~Yq~Cv~~aL 62 (91)
T PLN03079 16 SPCAELRTAYHNCFNRWYSEKFVKGQWDKEDCVAEWHKYRACLSEHL 62 (91)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCCcccchHHHHHHHHHHHHHHHH
Confidence 469999999999988732 233446789999999999986543
No 6
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=73.73 E-value=2.8 Score=32.48 Aligned_cols=59 Identities=19% Similarity=0.326 Sum_probs=38.1
Q ss_pred CCCCchhhhh---hhhhcCCCCcceeeeeeeeCCcchHHHHHH----------------HHHHHHHHHHHHHHHhhhc
Q 037428 27 PTFGSDLKIE---CLLWNSNNPTAYRIDPIRVSPNNQTQAVKA----------------VFYLTVHIRLEQLLVSFKV 85 (158)
Q Consensus 27 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 85 (158)
|.=|.++.|. |.-=+..+.-.|....|.--+.++++-|+. +=||||..|+|++..+...
T Consensus 2 PvCg~~l~vt~l~C~~C~t~i~G~F~l~~~~~L~~E~~~Fi~~Fi~~rGnlKe~e~~lgiSYPTvR~rLd~ii~~lg~ 79 (113)
T PF09862_consen 2 PVCGGELVVTRLKCPSCGTEIEGEFELPWFARLSPEQLEFIKLFIKNRGNLKEMEKELGISYPTVRNRLDKIIEKLGY 79 (113)
T ss_pred CCCCCceEEEEEEcCCCCCEEEeeeccchhhcCCHHHHHHHHHHHHhcCCHHHHHHHHCCCcHHHHHHHHHHHHHhCC
Confidence 4444444432 433444455566666666656666665543 2389999999999999977
No 7
>PF10200 Ndufs5: NADH:ubiquinone oxidoreductase, NDUFS5-15kDa; InterPro: IPR019342 Proteins in this entry form part of the NADH:ubiquinone oxidoreductase complex I. Complex I is the first multisubunit inner membrane protein complex of the mitochondrial electron transport chain and it transfers two electrons from NADH to ubiquinone. The mammalian complex I is composed of 45 different subunits. The proteins in this entry represent a component of the iron-sulphur (IP) fragment of the enzyme, that is not involved in catalysis. These proteins carry four highly conserved cysteine residues, but these do not appear to be in a configuration which would favour metal binding, so the exact function of the protein is uncertain [].
Probab=64.91 E-value=4.9 Score=30.50 Aligned_cols=39 Identities=23% Similarity=0.566 Sum_probs=33.1
Q ss_pred hhCcchHHHHHHHHhhhcCCCCCCCCchhhhhhhhhhhhh
Q 037428 108 PKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDK 147 (158)
Q Consensus 108 ~kC~k~k~~YdeCvERV~s~~~tkE~CveEfFDllHCVDh 147 (158)
..|..+...|-+|.+-+-. ..+++.|.-++-||+-|+-|
T Consensus 31 ~RC~~FE~e~i~C~~~~G~-~r~kKeC~~e~EDy~EClh~ 69 (96)
T PF10200_consen 31 SRCHPFEKEWIECAEAYGQ-TRGKKECKLELEDYYECLHH 69 (96)
T ss_pred CchHHHHHHHHHHHHHHcc-cchhhhchhHHhHHHHHHhh
Confidence 4699999999999987633 46789999999999999854
No 8
>PF02862 DDHD: DDHD domain; InterPro: IPR004177 The DDHD domain is 180 residues long and contains four conserved residues that may form a metal binding site. The domain is named after these four residues. This pattern of conservation of metal binding residues is often seen in phosphoesterase domains. This domain is found in retinal degeneration B proteins, as well as a family of probable phospholipases.; GO: 0046872 metal ion binding
Probab=61.77 E-value=0.49 Score=37.95 Aligned_cols=32 Identities=22% Similarity=0.454 Sum_probs=23.4
Q ss_pred hhhcCCCCcceeeeeeeeCCcchHHHHHHHHHHHH
Q 037428 38 LLWNSNNPTAYRIDPIRVSPNNQTQAVKAVFYLTV 72 (158)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (158)
-|+..-.|+||||||+--. .+.+ ++.+.+|+.
T Consensus 52 Nifhp~DPvAyRlEPli~~--~~~~-~~P~~ip~~ 83 (227)
T PF02862_consen 52 NIFHPYDPVAYRLEPLIDP--RYAD-IKPVSIPRF 83 (227)
T ss_pred eeeecCChHHHhHHHHHhh--hhcc-CCCeecccc
Confidence 6888999999999998655 4444 555555543
No 9
>TIGR03515 GldC gliding motility-associated protein GldC. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldC do not abolish the gliding phenotype but do impair it. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=52.09 E-value=37 Score=26.58 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=44.6
Q ss_pred hhhhhhcCCCCcceeeeeeeeCCcchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccccCChHHHHHHHhh
Q 037428 35 IECLLWNSNNPTAYRIDPIRVSPNNQTQAVKAVFYLTVHIRLEQLLVSFKVLCPERADEELVDQKKYFEEACK 107 (158)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~meEEE~vDPk~~LREeC~ 107 (158)
|.-|+|.++++.+-|||--.=. =-.++.|.-|+-|..---|.++.|-. .....+.+|.-|.
T Consensus 38 ~~lsvWD~~~k~tlrIDLWTKd--MpVdEMK~Ff~qtl~~maDT~~rAT~----------d~kma~~m~dfcd 98 (108)
T TIGR03515 38 ISLSIWDHDGKNTMRIDLWTKD--MPVDEMKRFFIETLGGMADTFLNATG----------DEKMAEDIKDLCD 98 (108)
T ss_pred hhhhhhcCCCCceeEEEeecCc--CcHHHHHHHHHHHHHHHHHHHHHhcC----------cHHHHHHHHHHHH
Confidence 3349999999999999976433 67899999999998777777766642 1234456666663
No 10
>PF05811 DUF842: Eukaryotic protein of unknown function (DUF842); InterPro: IPR008560 This family consists of a number of conserved eukaryotic proteins of unknown function. The sequences carry three sets of CxxxC motifs, which might suggest a type of zinc-finger formation.
Probab=47.48 E-value=14 Score=28.52 Aligned_cols=38 Identities=21% Similarity=0.496 Sum_probs=25.4
Q ss_pred HHHhhhcCC--CCCCCCchhhhhhhhhhhhhhhh------hHHhhhhC
Q 037428 119 ACVKRIQGD--ESGHKHCTGQYFDYWSCIDKCVA------VKLFQKLK 158 (158)
Q Consensus 119 eCvERV~s~--~~tkE~CveEfFDllHCVDhCVA------PKLF~kLK 158 (158)
.|.++++.. +.+.+.=... +|-.|+..||. |.|+++||
T Consensus 83 ~C~dk~~d~~~~~~~~~~~~~--~~e~C~~~Cvd~hi~llP~l~~r~k 128 (131)
T PF05811_consen 83 HCQDKAKDKMDPNPNESDAEK--QLESCVNKCVDDHIKLLPSLTKRMK 128 (131)
T ss_pred HHHHHHHhhccCCCCchHHHH--HHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 677887653 3334433333 88899999997 77777765
No 11
>PF03469 XH: XH domain; InterPro: IPR005379 The XH (rice gene X Homology) domain is found in a family of plant proteins including Oryza sativa (Rice) Q9SBW2 from SWISSPROT. The molecular function of these proteins is unknown, however these proteins usually contain an XS domain (IPR005380 from INTERPRO) that is also found in the PTGS protein SGS3. As the XS and XH domains are fused in most of these proteins, these two domains may interact. The XH domain is between 124 and 145 residues in length and contains a conserved glutamate residue that may be functionally important [].
Probab=34.94 E-value=52 Score=26.23 Aligned_cols=50 Identities=16% Similarity=0.340 Sum_probs=29.6
Q ss_pred hhhhhhhhhcCCCCc----ceeeeee------ee-CCcchHHHHHHHH----HHHHHHHHHHHHH
Q 037428 32 DLKIECLLWNSNNPT----AYRIDPI------RV-SPNNQTQAVKAVF----YLTVHIRLEQLLV 81 (158)
Q Consensus 32 ~~~~~~~~~~~~~~~----~~~~~~~------~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~ 81 (158)
..-.+||+||.+++- -|++.+. .| --.+-|++||+-+ |-+|.+|+-.+.+
T Consensus 27 ~A~~LcS~Wqe~ikdp~WhPFkvv~~~g~~~evi~edDekL~~Lk~e~Geevy~aV~~Al~E~nE 91 (132)
T PF03469_consen 27 KAAELCSLWQEEIKDPEWHPFKVVTVDGKEKEVIDEDDEKLQELKEEWGEEVYNAVTKALLEINE 91 (132)
T ss_pred HHHHHHHHHHHHhhCCCccceEEeccCCcccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999998643 2444221 11 1235588888665 5566666666554
No 12
>PF08583 Cmc1: Cytochrome c oxidase biogenesis protein Cmc1 like; InterPro: IPR013892 Cmc1 is a metallo-chaperone like protein which is known to localise to the inner mitochondrial membrane in Saccharomyces cerevisiae. It is essential for full expression of cytochrome c oxidase and respiration []. Cmc1 contains two Cx9C motifs and is able to bind copper(I). Cmc1 is thought to play a role in mitochondrial copper trafficking and transfer to cytochrome c oxidase.
Probab=30.16 E-value=37 Score=22.37 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=37.0
Q ss_pred HHHHHHhhhhCcchHHHHHHHHhhhcCCCCCCCCchhhhhhhhhhhhhhhhhHHh
Q 037428 100 KYFEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAVKLF 154 (158)
Q Consensus 100 ~~LREeC~~kC~k~k~~YdeCvERV~s~~~tkE~CveEfFDllHCVDhCVAPKLF 154 (158)
+.|++.=.+.|......|.+|... ..-..-..|-.+.-.+..|+-.=-.+.-|
T Consensus 3 ~~l~~~~~~~C~~~i~~~~~C~~~--~~~~~~~~C~~~~~~m~~Cl~~~~~~~~~ 55 (69)
T PF08583_consen 3 PQLKEEAHKKCADEIEAFAECHKD--RTFKFVGKCREEKKAMNECLKEERNDERF 55 (69)
T ss_pred hHHhHHHHHHhHHHHHHHHHHHhc--chHHHHHhhhHHHHHHHHHHHHHHhhHHH
Confidence 345555567899999999999998 32234567888888888887554443333
No 13
>PF10671 TcpQ: Toxin co-regulated pilus biosynthesis protein Q; InterPro: IPR018927 The toxin-coregulated pilus (TCP) of Vibrio cholerae and the soluble TcpF protein that is secreted via the TCP biogenesis apparatus are essential for intestinal colonisation in the disease of cholera. TCP fibres are homopolymers of TcpA pilin, encoded by the first gene in the tcp biogenesis operon. TcpQ is part of an outer membrane complex of the TCP biogenesis apparatus, comprised of TcpC and TcpQ. TcpQ is required for proper localisation of TcpC to the outer membrane [, ]. This entry represents a C-terminal domain found in TcpQ and other pilus biosynthesis proteins.; PDB: 3OV5_A 2L4W_A.
Probab=28.67 E-value=33 Score=24.10 Aligned_cols=30 Identities=33% Similarity=0.594 Sum_probs=16.6
Q ss_pred hhhcCCCCcceeeee-eeeCCcchHHHHHHHHHH
Q 037428 38 LLWNSNNPTAYRIDP-IRVSPNNQTQAVKAVFYL 70 (158)
Q Consensus 38 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 70 (158)
++|+++ .+|+|+- ++++ +...++|+++|-.
T Consensus 27 l~W~~~--~dy~i~~~~~~~-gsf~~Av~~l~~~ 57 (84)
T PF10671_consen 27 LVWDAP--KDYPIDAPATFS-GSFEDAVKQLFSA 57 (84)
T ss_dssp EEE-SS--S--B--CCCCC--E-HHHHHHHHHHH
T ss_pred EEecCC--CCEEecCceEec-CcHHHHHHHHHHH
Confidence 579865 4999975 4554 5899999988865
No 14
>COG5050 EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases [Lipid metabolism]
Probab=26.48 E-value=26 Score=32.50 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=21.8
Q ss_pred hhhcCCCCCCCCchhhhhhhhhhhhhhhh
Q 037428 122 KRIQGDESGHKHCTGQYFDYWSCIDKCVA 150 (158)
Q Consensus 122 ERV~s~~~tkE~CveEfFDllHCVDhCVA 150 (158)
+=..+|..+...=.||+|| ||||.|.+
T Consensus 98 DG~qARRTGt~spLGeLFD--H~vDsint 124 (384)
T COG5050 98 DGRQARRTGTGSPLGELFD--HGVDSINT 124 (384)
T ss_pred ccHhhhcCCCCCCcHHHHh--hhHHHHHH
Confidence 3345666788888999999 89999986
No 15
>PF14233 DUF4335: Domain of unknown function (DUF4335)
Probab=25.71 E-value=29 Score=28.52 Aligned_cols=17 Identities=35% Similarity=0.456 Sum_probs=14.4
Q ss_pred hhhhhhhhhhhhhhhhh
Q 037428 135 TGQYFDYWSCIDKCVAV 151 (158)
Q Consensus 135 veEfFDllHCVDhCVAP 151 (158)
+=|+||++.|+|.+.+.
T Consensus 117 ~~QLfDLv~aLDq~~~D 133 (189)
T PF14233_consen 117 TSQLFDLVEALDQFFAD 133 (189)
T ss_pred hhHHHHHHHHHHHHhhc
Confidence 35899999999999773
No 16
>PF08262 Lem_TRP: Leucophaea maderae tachykinin-related peptide ; InterPro: IPR013206 These peptides are designated Leucophaea maderae (Madeira cockroach) tachykinin-related peptides (Lem TRPs). Some were isolated from the midgut of L. maderae, whereas others appear to be brain specific. The Lem TRPs of the brain are myotropic and induce increases in the amplitude and frequency of spontaneous contractions and tonus of hindgut muscle in L. maderae []. They were also isolated from brain-corpora, cardiaca-corpora, allata-suboesophageal ganglion extracts of Locusta migratoria (Migratory locust). They stimulate visceral muscle contractions of the oviduct and the foregut of L. migratoria [].
Probab=25.10 E-value=30 Score=16.90 Aligned_cols=7 Identities=29% Similarity=0.501 Sum_probs=5.4
Q ss_pred CCCCchh
Q 037428 27 PTFGSDL 33 (158)
Q Consensus 27 ~~~~~~~ 33 (158)
||+||+-
T Consensus 2 psmgf~g 8 (10)
T PF08262_consen 2 PSMGFHG 8 (10)
T ss_pred Ccccccc
Confidence 8888873
Done!