Query 037429
Match_columns 402
No_of_seqs 294 out of 1862
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 20:55:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 5.9E-52 2E-56 413.7 25.0 297 82-400 9-351 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 3.7E-48 1.3E-52 381.5 22.4 261 82-400 46-321 (370)
3 3aup_A SBG7S, BG, basic 7S glo 100.0 2.2E-47 7.4E-52 380.4 24.9 293 82-400 10-338 (403)
4 1dpj_A Proteinase A; proteinas 100.0 7.9E-47 2.7E-51 366.6 20.6 263 82-400 3-280 (329)
5 2x0b_A Renin; hydrolase-hormon 100.0 6.5E-47 2.2E-51 373.6 19.4 261 82-400 51-330 (383)
6 2apr_A Rhizopuspepsin; hydrola 100.0 2.4E-46 8.3E-51 362.5 22.7 254 90-400 11-279 (325)
7 3c9x_A Trichoderma reesei aspa 100.0 8.2E-47 2.8E-51 366.5 18.2 255 90-400 11-281 (329)
8 1oew_A Endothiapepsin; hydrola 100.0 1.1E-46 3.9E-51 365.4 17.9 254 90-400 11-280 (329)
9 3cms_A Chymosin B; hydrolase, 100.0 3.6E-46 1.2E-50 361.0 18.9 260 83-400 5-278 (323)
10 1tzs_A Cathepsin E; hydrolase, 100.0 1.3E-45 4.3E-50 361.2 22.7 262 83-400 14-289 (351)
11 4aa9_A Chymosin; hydrolase, as 100.0 3.4E-46 1.2E-50 360.7 17.9 258 84-400 3-275 (320)
12 1am5_A Pepsin, acid proteinase 100.0 6.1E-46 2.1E-50 359.6 19.3 259 83-400 3-275 (324)
13 1htr_B Gastricsin; aspartyl pr 100.0 5.4E-46 1.8E-50 360.7 18.5 263 83-401 4-280 (329)
14 2qzx_A Candidapepsin-5; aspart 100.0 3.1E-45 1E-49 357.3 20.8 255 82-400 3-282 (342)
15 1j71_A Candidapepsin, aspartic 100.0 3.6E-45 1.2E-49 355.6 20.2 252 82-400 3-280 (334)
16 2bju_A Plasmepsin II; aspartic 100.0 1.6E-45 5.3E-50 370.0 16.5 257 82-400 128-400 (453)
17 3k1w_A Renin; protease, altern 100.0 8.1E-45 2.8E-49 354.0 18.6 262 82-400 8-287 (341)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.6E-44 5.6E-49 351.6 20.0 255 82-400 3-286 (339)
19 3pvk_A Candidapepsin-2; hydrol 100.0 1.8E-44 6.3E-49 351.7 20.1 256 82-400 3-282 (342)
20 1mpp_A Pepsin; hydrolase(acid 100.0 2.5E-44 8.6E-49 353.3 20.1 265 82-400 8-308 (361)
21 1miq_A Plasmepsin; aspartic pr 100.0 3.1E-44 1.1E-48 354.1 19.2 256 82-400 52-324 (375)
22 1t6e_X Xylanase inhibitor; two 100.0 6.7E-44 2.3E-48 352.7 20.1 282 83-400 4-320 (381)
23 1ibq_A Aspergillopepsin; aspar 100.0 5.6E-44 1.9E-48 345.9 19.2 251 90-400 10-276 (325)
24 1qdm_A Prophytepsin; aspartic 100.0 2.6E-43 8.9E-48 357.0 23.7 224 82-349 42-281 (478)
25 1izd_A Aspartic proteinase; su 100.0 1.1E-43 3.7E-48 343.6 17.7 250 90-400 11-276 (323)
26 1yg9_A Aspartic protease BLA G 100.0 8.9E-44 3E-48 345.2 16.5 260 82-400 7-284 (330)
27 3qvc_A Histo-aspartic protease 100.0 1.6E-43 5.3E-48 355.8 17.8 256 82-400 127-399 (451)
28 1bxo_A Protein (penicillopepsi 100.0 1.1E-43 3.8E-48 343.6 15.1 249 90-400 11-275 (323)
29 2ewy_A Beta-secretase 2; BACE2 100.0 1.2E-42 4.3E-47 343.9 22.1 268 90-400 9-306 (383)
30 2qp8_A Beta-secretase 1; BACE1 100.0 5.7E-42 1.9E-46 340.5 22.3 266 91-400 18-317 (395)
31 1b5f_A Protein (cardosin A); h 100.0 1.5E-42 5.1E-47 321.5 16.7 223 83-349 4-238 (239)
32 1wkr_A Polyporopepsin; hydrola 100.0 3.6E-42 1.2E-46 335.3 19.7 249 82-400 3-275 (340)
33 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-41 4.9E-46 343.5 22.5 268 91-400 71-370 (455)
34 3vf3_A Beta-secretase 1; struc 100.0 2.6E-41 8.8E-46 336.5 23.4 266 92-400 26-324 (402)
35 1lya_A Cathepsin D; lysosomal 99.9 1.1E-24 3.9E-29 172.3 9.1 90 82-195 3-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 2.8E-23 9.6E-28 192.1 11.6 172 201-400 3-188 (241)
37 1b5f_B Protein (cardosin A); h 95.2 0.0056 1.9E-07 46.2 1.4 24 377-400 11-35 (87)
38 3liy_A Protease; hydrolase, hy 78.6 1.8 6.3E-05 33.9 3.7 31 97-127 12-45 (116)
39 1fmb_A EIAV protease; hydrolas 78.6 2.1 7.2E-05 33.1 4.1 25 97-123 10-34 (104)
40 2hs1_A HIV-1 protease; ultra-h 78.3 2.7 9.3E-05 32.1 4.5 27 97-125 10-36 (99)
41 3ec0_A Protease; HIV-2, inhibi 75.3 3.5 0.00012 31.5 4.4 27 97-125 10-36 (99)
42 2i1a_A DNA damage-inducible pr 69.1 4 0.00014 33.2 3.8 31 92-124 23-53 (148)
43 2hah_A Protease, retropepsin; 64.6 6.2 0.00021 31.1 3.8 23 100-124 18-40 (116)
44 3sqf_A Protease; folded monome 62.9 7.8 0.00027 30.4 4.0 28 97-126 11-38 (114)
45 3s8i_A Protein DDI1 homolog 1; 60.8 7.1 0.00024 32.1 3.7 31 93-125 22-52 (148)
46 3slz_A GAG-Pro-POL polyprotein 47.4 22 0.00075 28.5 4.5 27 97-125 24-50 (132)
47 2rsp_A RSV protease; hydrolase 44.7 18 0.0006 28.8 3.4 21 106-126 29-49 (124)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 44.1 19 0.00066 31.2 3.8 26 97-124 10-35 (203)
49 3c9x_A Trichoderma reesei aspa 37.2 26 0.0009 32.4 4.0 34 92-125 191-230 (329)
50 1bxo_A Protein (penicillopepsi 33.3 28 0.00095 32.1 3.4 34 92-125 187-224 (323)
51 1oew_A Endothiapepsin; hydrola 31.4 31 0.0011 31.9 3.4 34 92-125 190-229 (329)
52 2apr_A Rhizopuspepsin; hydrola 30.5 32 0.0011 31.7 3.4 33 93-125 192-229 (325)
53 1ibq_A Aspergillopepsin; aspar 29.8 38 0.0013 31.2 3.7 34 92-125 186-225 (325)
54 1b5f_A Protein (cardosin A); h 29.6 40 0.0014 29.6 3.7 32 93-124 187-226 (239)
55 1izd_A Aspartic proteinase; su 29.3 36 0.0012 31.4 3.5 34 92-125 187-225 (323)
56 1lya_B Cathepsin D; lysosomal 26.1 54 0.0019 28.5 4.0 33 93-125 98-137 (241)
57 3ka2_A [L-Ala51;Gly51']HIV-1 p 25.7 58 0.002 28.1 3.8 26 97-124 114-139 (203)
58 1mpp_A Pepsin; hydrolase(acid 20.4 90 0.0031 29.0 4.5 31 95-125 210-248 (361)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.9e-52 Score=413.74 Aligned_cols=297 Identities=20% Similarity=0.328 Sum_probs=241.8
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...|++. ...+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+||+.++|.++.|.....
T Consensus 9 ~~~pv~~-d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 9 LVVPVKK-DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGS 74 (413)
T ss_dssp EEEEEEE-CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTC
T ss_pred EEEEeee-cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccccccc
Confidence 5667753 35789999999999999999999999999999999875 379999999999999986543
Q ss_pred C----------CCCCCCCCceEEee-CCCCeEeEEEEEEEEEEecCCCC----ceeeccEEEEeeeCCCCcccccCCccc
Q 037429 162 L----------YKCVDQQCVYSVGY-GGGGTTKGVASFESFRFATDSSS----ATTVDNIIFGCSNDNQNIQFASRGVIS 226 (402)
Q Consensus 162 ~----------~~C~~~~~~~~~~Y-~dGs~~~G~~~~D~v~~~~~~~~----~~~~~~~~fG~~~~~~~~~~~~~~~~~ 226 (402)
. ..|..+.|.|.+.| +||+.+.|++++|+|+|+..+|. .+.++++.|||++.+.+.. .+ ...|
T Consensus 75 ~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~-~~~d 152 (413)
T 3vla_A 75 IACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LA-SGVV 152 (413)
T ss_dssp CEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SC-TTCC
T ss_pred CCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cc-cccc
Confidence 1 23544449999999 58888889999999999865443 3578999999999863210 23 5689
Q ss_pred eeeecCCCCChhhhhhhhh--ccCceEEeeccCCCCCCCCceEEECCCCCC------CCCC-eeeeeecCCCC-------
Q 037429 227 GILGLSSSPDSIVMQLSDV--VDKRFSYCLVPFTDALMAPSIVKFGNDIPP------LSGT-VQATTFVPPPG------- 290 (402)
Q Consensus 227 GIlGLg~~~~s~~~ql~~~--~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~------~~~~-~~~tp~~~~~~------- 290 (402)
||||||++++|+++||..+ +.++|||||++. ...+|.|+||+.+.. +.+. +.||||+.++.
T Consensus 153 GIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~---~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 153 GMAGLGRTRIALPSQFASAFSFKRKFAMCLSGS---TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp EEEECSSSSSSHHHHHHHHHTCCSEEEEECCSC---SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred cccccCCCCcchHHHHhhhcCCCceEEEeCCCC---CCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 9999999999999999987 569999999984 256899999998753 2456 99999998742
Q ss_pred ----CceeEEEEEEEEECCEEeeecccccc-cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCC
Q 037429 291 ----SFYYHLSLIDISVGTRRSRSVTTTLA-RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVP 363 (402)
Q Consensus 291 ----~~~y~v~l~~i~vg~~~~~~~~~~~~-~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~ 363 (402)
..||+|+|++|+||++.+.++...|+ +.++++++| ||| ++++||+++|++|+++|.+++..++++++. ..
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aI--iDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~-~~ 306 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTK--ISTINPYTVLETSIYKAVTEAFIKESAARNITRVA-SV 306 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEE--ECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC-CC
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEE--EECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC-CC
Confidence 26999999999999999998877776 444678899 999 999999999999999999987633355543 23
Q ss_pred CCCCccccCCCCC-----ccccEEEEEEcC--cEEEEccc-cccc
Q 037429 364 EGLQLCYTNPPGF-----NNFASFTYHFDG--ASYDIEGK-FVNL 400 (402)
Q Consensus 364 ~~~~~C~~~~~~~-----~~~P~i~f~f~G--~~~~l~~~-yi~~ 400 (402)
..++.||..++.. ..+|+|+|+|+| ++|+||++ ||..
T Consensus 307 ~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~ 351 (413)
T 3vla_A 307 APFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVY 351 (413)
T ss_dssp TTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEE
T ss_pred CCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEE
Confidence 3467899987542 379999999997 89999999 8764
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.7e-48 Score=381.47 Aligned_cols=261 Identities=19% Similarity=0.264 Sum_probs=215.8
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...||. ++.+.+|+++|+||||||+|.|+|||||+++||+|..|..|.|+.++.|||++|+||+...
T Consensus 46 ~~~~l~--n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~----------- 112 (370)
T 3psg_A 46 GDEPLE--NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS----------- 112 (370)
T ss_dssp CCCTTG--GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE-----------
T ss_pred ceecce--eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC-----------
Confidence 456775 7889999999999999999999999999999999999999889999999999999999842
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh---
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS--- 237 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s--- 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 113 --------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~--~~~~~~~dGIlGLg~~~~s~~~ 176 (370)
T 3psg_A 113 --------QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGS--FLYYAPFDGILGLAYPSISASG 176 (370)
T ss_dssp --------EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCG--GGGGCSCSEEEECSCGGGCGGG
T ss_pred --------cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeeccc--ccccCCccceeccCCccccccC
Confidence 899999999994 69999999999987 8999999999988762 22 3568999999998764
Q ss_pred ---hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeee
Q 037429 238 ---IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRS 310 (402)
Q Consensus 238 ---~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~ 310 (402)
+.++|.++ + .++||+||.+. ...+|.|+|||+|+.+ .+++.|+|+... .+|.|+|++|+||++.+..
T Consensus 177 ~~~~~~~l~~qg~i~~~~FS~~L~~~---~~~~G~l~fGg~D~~~y~g~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~ 250 (370)
T 3psg_A 177 ATPVFDNLWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSYYTGSLNWVPVSVE---GYWQITLDSITMDGETIAC 250 (370)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECSEE---TTEEEEECEEESSSSEEEC
T ss_pred CCCHHHHHHHCCCCCCCEEEEEEccC---CCCCeEEEEEeeChHhcCCcceeeccccc---ceeEEEEeEEEECCEEEec
Confidence 45677776 3 68999999985 2468999999998875 577999999864 5899999999999987653
Q ss_pred cccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCC-CccccEEEEEEc
Q 037429 311 VTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPG-FNNFASFTYHFD 387 (402)
Q Consensus 311 ~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~f~f~ 387 (402)
. +.+++| ||| +++++|+++|++|.+++.+... ...+|..+|. ...+|+|+|+|+
T Consensus 251 ~--------~~~~ai--iDTGTs~~~lP~~~~~~i~~~i~a~~~-------------~~g~~~v~C~~~~~lP~i~f~~~ 307 (370)
T 3psg_A 251 S--------GGCQAI--VDTGTSLLTGPTSAIANIQSDIGASEN-------------SDGEMVISCSSIDSLPDIVFTID 307 (370)
T ss_dssp T--------TCEEEE--ECTTCCSEEEEHHHHHHHHHHTTCEEC-------------TTCCEECCGGGGGGCCCEEEEET
T ss_pred C--------CCceEE--EcCCCCcEECCHHHHHHHHHHhCCccc-------------CCCcEEEECCCcccCCcEEEEEC
Confidence 2 245789 999 9999999999999888744321 1124555554 257899999999
Q ss_pred CcEEEEccc-cccc
Q 037429 388 GASYDIEGK-FVNL 400 (402)
Q Consensus 388 G~~~~l~~~-yi~~ 400 (402)
|++++||++ |+..
T Consensus 308 g~~~~l~~~~yi~~ 321 (370)
T 3psg_A 308 GVQYPLSPSAYILQ 321 (370)
T ss_dssp TEEEEECHHHHEEE
T ss_pred CEEEEECHHHhccc
Confidence 999999999 8764
No 3
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.2e-47 Score=380.44 Aligned_cols=293 Identities=17% Similarity=0.274 Sum_probs=224.1
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...||.. +..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|.....
T Consensus 10 ~~~pl~~-~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 10 VVLPVQN-DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp EEEEEEE-CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTC
T ss_pred EEEeeec-CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccc
Confidence 4567731 34789999999999999999999999999999998864 379999999999998875532
Q ss_pred ----------CCCCCCCCCceEEeeC-CCCeEeEEEEEEEEEEecCCCCc------eeeccEEEEeeeCCCCcccccCCc
Q 037429 162 ----------LYKCVDQQCVYSVGYG-GGGTTKGVASFESFRFATDSSSA------TTVDNIIFGCSNDNQNIQFASRGV 224 (402)
Q Consensus 162 ----------~~~C~~~~~~~~~~Y~-dGs~~~G~~~~D~v~~~~~~~~~------~~~~~~~fG~~~~~~~~~~~~~~~ 224 (402)
...|....|.|.+.|+ ||+.+.|.+++|+|+|++.++.. +.++++.|||++...+..+. ...
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~-~~~ 154 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL-PRN 154 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSS-STT
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCC-CCC
Confidence 1235433499999998 78888899999999999854332 58899999999986431002 256
Q ss_pred cceeeecCCCCChhhhhhhhh--ccCceEEeeccCCCCCCCCceEEECCCCCCCC----C-----CeeeeeecCCCCCce
Q 037429 225 ISGILGLSSSPDSIVMQLSDV--VDKRFSYCLVPFTDALMAPSIVKFGNDIPPLS----G-----TVQATTFVPPPGSFY 293 (402)
Q Consensus 225 ~~GIlGLg~~~~s~~~ql~~~--~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~~----~-----~~~~tp~~~~~~~~~ 293 (402)
.+||||||++.+++++||++. ..++||+||.+. ....|.|+||+ |+.+. + .+.|+||+.++ ..+
T Consensus 155 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~---~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-~~~ 229 (403)
T 3aup_A 155 TQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRY---PTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-QGE 229 (403)
T ss_dssp CCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSC---TTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-TSC
T ss_pred CceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCC---CCCCeeEEECC-CchhccccccccccCceeecccccCC-CCc
Confidence 899999999999999999765 468999999874 24689999999 55432 3 79999999864 359
Q ss_pred eEEEEEEEEECCEEe-eecccccc-cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCcc
Q 037429 294 YHLSLIDISVGTRRS-RSVTTTLA-RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLC 369 (402)
Q Consensus 294 y~v~l~~i~vg~~~~-~~~~~~~~-~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C 369 (402)
|.|+|++|+||++.+ .++...++ +..+.+++| ||| ++++||+++|++|.++|.+++.. ++++.. ...++.|
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~ai--iDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~-~~~~~~c 304 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTM--ISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKS-VAPFGLC 304 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEE--ECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECC-CTTCSCE
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEE--EECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCC-CCCCCce
Confidence 999999999999988 66665554 345567899 999 99999999999999999887652 333322 2234568
Q ss_pred ccCCCCCccccEEEEEEcC---cEEEEccc-cccc
Q 037429 370 YTNPPGFNNFASFTYHFDG---ASYDIEGK-FVNL 400 (402)
Q Consensus 370 ~~~~~~~~~~P~i~f~f~G---~~~~l~~~-yi~~ 400 (402)
|..+. ...+|+|+|+|+| ++|+||++ ||..
T Consensus 305 ~~c~~-~~~~P~i~f~f~g~~~~~~~l~~~~y~~~ 338 (403)
T 3aup_A 305 FNSNK-INAYPSVDLVMDKPNGPVWRISGEDLMVQ 338 (403)
T ss_dssp ECGGG-CCCCCCEEEEESSTTCCEEEECHHHHEEE
T ss_pred EECCC-cCcCCcEEEEEcCCCceEEEEcccceEEE
Confidence 85432 2479999999997 59999999 8864
No 4
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=7.9e-47 Score=366.60 Aligned_cols=263 Identities=18% Similarity=0.275 Sum_probs=215.2
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
..+|+. ++.+.+|+++|.||||||++.|+|||||+++||+|.+|..|.|..++.|||++|+||+.. +
T Consensus 3 ~~~~l~--~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~-----------~ 69 (329)
T 1dpj_A 3 HDVPLT--NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKAN-----------G 69 (329)
T ss_dssp EEEECE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEE-----------E
T ss_pred cceeee--ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEEC-----------C
Confidence 356775 577899999999999999999999999999999999999866667789999999999872 3
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCChhh-
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDSIV- 239 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s~~- 239 (402)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.+++.
T Consensus 70 --------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~--~f~~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 70 --------TEFAIQYGTGS-LEGYISQDTLSIGDL-----TIPKQDFAEATSEPGL--TFAFGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp --------EEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCHH--HHTTCSCSEEEECSCGGGCGGG
T ss_pred --------cEEEEEECCce-EEEEEEEEEEEECCe-----EECCeEEEEEEecCcc--ccccCCcceEEEeCCchhhccC
Confidence 89999999995 569999999999976 8999999999987652 12 356899999999877643
Q ss_pred -----hhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeee
Q 037429 240 -----MQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRS 310 (402)
Q Consensus 240 -----~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~ 310 (402)
.+|.++ + .++||+||.+........|.|+||+.|+.+ .+++.|+|+... .+|.|.|++|+||++.+..
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~ 210 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK---AYWEVKFEGIGLGDEYAEL 210 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEEC
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC---ceEEEEeeeEEECCeEecC
Confidence 566666 3 589999998753222357999999998765 467999999863 4999999999999987753
Q ss_pred cccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCC-CccccEEEEEEc
Q 037429 311 VTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPG-FNNFASFTYHFD 387 (402)
Q Consensus 311 ~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~f~f~ 387 (402)
...++| ||| ++++||+++|++|.+++.+... ...||..+|. ...+|+|+|+|+
T Consensus 211 ---------~~~~ai--iDSGTt~~~lP~~~~~~l~~~~~~~~~-------------~~g~~~~~C~~~~~~P~i~f~f~ 266 (329)
T 1dpj_A 211 ---------ESHGAA--IDTGTSLITLPSGLAEMINAEIGAKKG-------------WTGQYTLDCNTRDNLPDLIFNFN 266 (329)
T ss_dssp ---------SSCEEE--ECTTCSCEEECHHHHHHHHHHHTCEEC-------------TTSSEEECGGGGGGCCCEEEEET
T ss_pred ---------CCccEE--eeCCCCcEECCHHHHHHHHHHhCCccC-------------CCCeEEEECCCCCcCCcEEEEEC
Confidence 245799 999 9999999999999988743211 1235666665 257899999999
Q ss_pred CcEEEEccc-cccc
Q 037429 388 GASYDIEGK-FVNL 400 (402)
Q Consensus 388 G~~~~l~~~-yi~~ 400 (402)
|++++||++ |+..
T Consensus 267 g~~~~i~~~~y~~~ 280 (329)
T 1dpj_A 267 GYNFTIGPYDYTLE 280 (329)
T ss_dssp TEEEEECTTTSEEE
T ss_pred CEEEEECHHHhEec
Confidence 999999999 8865
No 5
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=6.5e-47 Score=373.63 Aligned_cols=261 Identities=17% Similarity=0.316 Sum_probs=212.0
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC----CcccCCCCCcCCCCCCccccCCCCCcCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK----NCYRQQFPIYNSVASSTYRKLPCDHPLCQ 157 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~f~p~~SsT~~~v~C~s~~C~ 157 (402)
...||. ++.+.+|+++|+||||||+|.|+|||||+++||+|..|. .|. .++.|||++|+||+..
T Consensus 51 ~~~~l~--n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~-------- 118 (383)
T 2x0b_A 51 SSVILT--NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHN-------- 118 (383)
T ss_dssp CEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEE--------
T ss_pred ceEeee--ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEEC--------
Confidence 357785 678999999999999999999999999999999999996 464 5688999999999983
Q ss_pred CCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCC
Q 037429 158 GDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPD 236 (402)
Q Consensus 158 ~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~ 236 (402)
+ |.|.+.|++|+. +|.+++|+|+|++. .++ +.|||++...+. .| ....|||||||++.+
T Consensus 119 ---~--------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~--~f~~~~~dGIlGLg~~~~ 178 (383)
T 2x0b_A 119 ---G--------TELTLRYSTGTV-SGFLSQDIITVGGI-----TVT-QMFGEVTEMPAL--PFMLAEFDGVVGMGFIEQ 178 (383)
T ss_dssp ---E--------EEEEEECSSCEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECCHH--HHTTCSSSEEEECSCGGG
T ss_pred ---C--------cEEEEEcCCccE-EEEEEeeEEEEcCc-----eEE-EEEEEEEecCCc--ccccCCCceEeccCCCcc
Confidence 2 899999999985 59999999999986 888 999999987662 12 357899999999877
Q ss_pred h------hhhhhhhh--c-cCceEEeeccCCCC-CCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECC
Q 037429 237 S------IVMQLSDV--V-DKRFSYCLVPFTDA-LMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGT 305 (402)
Q Consensus 237 s------~~~ql~~~--~-~~~FS~~l~~~~~~-~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~ 305 (402)
+ +..+|.+| + .++||+||.+..+. ...+|.|+|||.|+.+ .+++.|+|+... .||.|+|++|+||+
T Consensus 179 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~---~~w~v~l~~i~v~~ 255 (383)
T 2x0b_A 179 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---GVWQIQMKGVSVGS 255 (383)
T ss_dssp CGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST---TSCEEEECEEEESS
T ss_pred ccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC---ceEEEEEeEEEeCC
Confidence 5 44667776 3 68999999885211 1148999999998775 467999999863 59999999999999
Q ss_pred EEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEE
Q 037429 306 RRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFT 383 (402)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~ 383 (402)
+.+.. ...+++| ||| +++++|+++|++|.++|.+.. . .... ...|+.. ..+|+|+
T Consensus 256 ~~~~~--------~~~~~ai--iDTGTs~~~lP~~~~~~i~~~i~a~~-------~-~g~~-~v~C~~~----~~~P~i~ 312 (383)
T 2x0b_A 256 STLLC--------EDGCLAL--VDTGASYISGSTSSIEKLMEALGAKK-------R-LFDY-VVKCNEG----PTLPDIS 312 (383)
T ss_dssp CCCBS--------TTCEEEE--ECTTCSSEEECHHHHHHHHHHHTCEE-------C-SSCE-EEEGGGT----TTCCCEE
T ss_pred ceEEc--------CCCcEEE--EcCCCceEEcCHHHHHHHHHHhCCcc-------c-CCcE-EEecccc----ccCceEE
Confidence 86422 2345789 999 999999999999998885422 1 1111 2357765 5789999
Q ss_pred EEEcCcEEEEccc-cccc
Q 037429 384 YHFDGASYDIEGK-FVNL 400 (402)
Q Consensus 384 f~f~G~~~~l~~~-yi~~ 400 (402)
|+|+|++|+||++ ||..
T Consensus 313 f~~~g~~~~l~~~~yi~~ 330 (383)
T 2x0b_A 313 FHLGGKEYTLTSADYVFQ 330 (383)
T ss_dssp EEETTEEEEECHHHHBCC
T ss_pred EEECCEEEEECHHHhEee
Confidence 9999999999999 8865
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.4e-46 Score=362.53 Aligned_cols=254 Identities=19% Similarity=0.285 Sum_probs=210.7
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.||||+|++.|+|||||+++||+|.+|..| ++.++.|||++|+||+.. +
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~-----------~-------- 70 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQAD-----------G-------- 70 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEE-----------E--------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeC-----------C--------
Confidence 67889999999999999999999999999999999999999 888999999999999872 2
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh-------hhhh
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS-------IVMQ 241 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s-------~~~q 241 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++.++ ++++
T Consensus 71 ~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~---~f~~~~~~GilGLg~~~~s~~~~~~~~~~~ 142 (325)
T 2apr_A 71 RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAA---SFASGPNDGLLGLGFDTITTVRGVKTPMDN 142 (325)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHTSSCSEEEECSCGGGCSSTTCCCHHHH
T ss_pred CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCc---ccccCCCceEEEeCCcccccccCCCCHHHH
Confidence 899999999998889999999999986 899999999998766 44 3458999999998764 5578
Q ss_pred hhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeeccccccc
Q 037429 242 LSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLAR 317 (402)
Q Consensus 242 l~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~ 317 (402)
|.++ + .++||+||.+.. ....|.|+||+.|+.+ .+++.|+|+... +.+|.|.|++|+||++ +. .
T Consensus 143 l~~qg~i~~~~FS~~l~~~~--~~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~vg~~-~~--~----- 210 (325)
T 2apr_A 143 LISQGLISRPIFGVYLGKAK--NGGGGEYIFGGYDSTKFKGSLTTVPIDNS--RGWWGITVDRATVGTS-TV--A----- 210 (325)
T ss_dssp HHHTTSCSSSEEEEEECCGG--GTCCEEEEETCCCGGGBCSCCEEEECBCT--TSSCEEEECEEEETTE-EE--E-----
T ss_pred HHhcCCCCCceEEEEecCCC--CCCCCEEEEccCCchhccCceEEEEccCC--CCEEEEEEeEEEECCE-ec--C-----
Confidence 8776 4 689999997642 2468999999998765 577999999754 3599999999999993 31 1
Q ss_pred ccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEcc
Q 037429 318 SRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEG 395 (402)
Q Consensus 318 ~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~~ 395 (402)
...++| ||| ++++||+++|+++.+++.+.+.. . . -|..+|....+|+|+|+|+|.+++||+
T Consensus 211 --~~~~~i--iDSGTs~~~lP~~~~~~~~~~~~~~~~~--------~-g----~~~~~C~~~~~p~i~f~f~g~~~~ip~ 273 (325)
T 2apr_A 211 --SSFDGI--LDTGTTLLILPNNIAASVARAYGASDNG--------D-G----TYTISCDTSAFKPLVFSINGASFQVSP 273 (325)
T ss_dssp --CCEEEE--ECTTCSSEEEEHHHHHHHHHHHTCEECS--------S-S----CEEECSCGGGCCCEEEEETTEEEEECG
T ss_pred --CCceEE--EecCCccEECCHHHHHHHHHHHhcccCC--------C-C----eEEEECCCCCCCcEEEEECCEEEEECH
Confidence 134689 999 99999999999999998665541 0 1 133344423489999999988999999
Q ss_pred c-cccc
Q 037429 396 K-FVNL 400 (402)
Q Consensus 396 ~-yi~~ 400 (402)
+ |+..
T Consensus 274 ~~~~~~ 279 (325)
T 2apr_A 274 DSLVFE 279 (325)
T ss_dssp GGGEEE
T ss_pred HHEEEc
Confidence 9 7653
No 7
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.2e-47 Score=366.47 Aligned_cols=255 Identities=19% Similarity=0.238 Sum_probs=209.4
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.||||+|++.|+|||||+++||+|..|..|.++.++.|||++|+||+.++|
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~------------------ 72 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG------------------ 72 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT------------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC------------------
Confidence 56889999999999999999999999999999999999999999999999999999998632
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh---------h
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS---------I 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s---------~ 238 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++ +
T Consensus 73 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 144 (329)
T 3c9x_A 73 ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVST---EFVQDTVISGLVGLAFDSGNQVRPHPQKTW 144 (329)
T ss_dssp CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHHCTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCc---cccccCCCceeEEeCcccccccCCCCCCCH
Confidence 899999999997789999999999986 899999999998766 43 2578999999998665 3
Q ss_pred hhhhhhhc-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccc
Q 037429 239 VMQLSDVV-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLA 316 (402)
Q Consensus 239 ~~ql~~~~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~ 316 (402)
.++|.+++ .++||+||.+ ...|.|+||+.|..+ .+++.|+|+... +.+|.|+|++|+||++.+. .
T Consensus 145 ~~~l~~~i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~--~---- 211 (329)
T 3c9x_A 145 FSNAASSLAEPLFTADLRH-----GQNGSYNFGYIDTSVAKGPVAYTPVDNS--QGFWEFTASGYSVGGGKLN--R---- 211 (329)
T ss_dssp HHHHHTTSSSSEEEEECCS-----SSCEEEEESSCCGGGCSSCEEEEECBCT--TSSCEEEECCEEETTCCCC--S----
T ss_pred HHHHHHhcCCCEEEEEecC-----CCCcEEEEeCcChhhcccceEEEEccCC--CceEEEEEeeEEECCEecc--C----
Confidence 45666664 6899999986 357999999998765 577999999854 3599999999999998653 1
Q ss_pred cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEc
Q 037429 317 RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIE 394 (402)
Q Consensus 317 ~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~ 394 (402)
...++| ||| ++++||+++|++|.+++..... . .... -|..+|. ..+|+|+|+|+|++++||
T Consensus 212 ---~~~~ai--iDSGTt~~~lp~~~~~~i~~~i~~a~~----~---~~~~----~~~~~C~-~~~P~i~f~f~g~~~~ip 274 (329)
T 3c9x_A 212 ---NSIDGI--ADTGTTLLLLDDNVVDAYYANVQSAQY----D---NQQE----GVVFDCD-EDLPSFSFGVGSSTITIP 274 (329)
T ss_dssp ---CCEEEE--ECTTCCSEEECHHHHHHHHTTCTTCEE----E---TTTT----EEEEETT-CCCCCEEEEETTEEEEEC
T ss_pred ---CCceEE--EECCCCcEeCCHHHHHHHHHhCCCcEE----c---CCCC----EEEEECC-CCCCcEEEEECCEEEEEC
Confidence 134689 999 9999999999998877632211 1 0111 1223333 468999999999999999
Q ss_pred cc-cccc
Q 037429 395 GK-FVNL 400 (402)
Q Consensus 395 ~~-yi~~ 400 (402)
++ |+..
T Consensus 275 ~~~~~~~ 281 (329)
T 3c9x_A 275 GDLLNLT 281 (329)
T ss_dssp GGGGEEE
T ss_pred HHHeeee
Confidence 99 7653
No 8
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.1e-46 Score=365.44 Aligned_cols=254 Identities=20% Similarity=0.229 Sum_probs=207.3
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.||||+|++.|+|||||+++||+|.+|..|.+ .++.|||++|+||+.++|
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~------------------ 71 (329)
T 1oew_A 11 DSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG------------------ 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE------------------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC------------------
Confidence 4678999999999999999999999999999999999999988 888999999999998632
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh---------h
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS---------I 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s---------~ 238 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++ +
T Consensus 72 ~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 143 (329)
T 1oew_A 72 ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSS---SFTEDSTIDGLLGLAFSTLNTVSPTQQKTF 143 (329)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHHCTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCc---cccccCCCceEEEeccccccccCcCCCCCH
Confidence 899999999997789999999999986 899999999998766 43 2568999999998665 3
Q ss_pred hhhhhhhc-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccc
Q 037429 239 VMQLSDVV-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLA 316 (402)
Q Consensus 239 ~~ql~~~~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~ 316 (402)
.++|.+++ .++||+||.+ ...|.|+||+.|+.+ .+++.|+|+... +.+|.|+|++|+||++.+..
T Consensus 144 ~~~l~~~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~~~v~l~~i~v~~~~~~~------ 210 (329)
T 1oew_A 144 FDNAKASLDSPVFTADLGY-----HAPGTYNFGFIDTTAYTGSITYTAVSTK--QGFWEWTSTGYAVGSGTFKS------ 210 (329)
T ss_dssp HHHHTTTSSSSEEEEECCS-----SSCEEEEESCCCTTSSSSCCEEEECBCT--TSSCEEEEEEEEETTSCCEE------
T ss_pred HHHHHHhccCcEEEEEccC-----CCCeEEEEeccChHhcccceEEEEccCC--CceEEEEEeeEEECCeeccC------
Confidence 45666664 6899999986 357999999998765 477999999854 35999999999999986531
Q ss_pred cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEc
Q 037429 317 RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIE 394 (402)
Q Consensus 317 ~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~ 394 (402)
...++| ||| ++++||+++|++|.+++.+... . ... .-|..+|. ..+|+|+|+|+|++++||
T Consensus 211 ---~~~~ai--iDSGTt~~~lP~~~~~~l~~~i~~a~~----~---~~~----g~~~~~C~-~~~P~i~f~fgg~~~~ip 273 (329)
T 1oew_A 211 ---TSIDGI--ADTGTTLLYLPATVVSAYWAQVSGAKS----S---SSV----GGYVFPCS-ATLPSFTFGVGSARIVIP 273 (329)
T ss_dssp ---EEEEEE--ECTTCCSEEECHHHHHHHHTTSTTCEE----E---TTT----TEEEEETT-CCCCCEEEEETTEEEEEC
T ss_pred ---CCceEE--EeCCCCCEECCHHHHHHHHHhCCCcEE----c---CCC----CEEEEECC-CCCCcEEEEECCEEEEEC
Confidence 124689 999 9999999999998877632211 0 011 11233343 468999999999999999
Q ss_pred cc-cccc
Q 037429 395 GK-FVNL 400 (402)
Q Consensus 395 ~~-yi~~ 400 (402)
++ |+..
T Consensus 274 ~~~~~~~ 280 (329)
T 1oew_A 274 GDYIDFG 280 (329)
T ss_dssp HHHHEEE
T ss_pred HHHeeee
Confidence 99 7653
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.6e-46 Score=361.03 Aligned_cols=260 Identities=15% Similarity=0.233 Sum_probs=210.6
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCC
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNL 162 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~ 162 (402)
..||. ++.+.+|+++|.||||||++.|+|||||+++||+|..|....|..++.|||++|+||+...
T Consensus 5 ~~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 70 (323)
T 3cms_A 5 SVPLT--NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLG------------ 70 (323)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeE--eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECC------------
Confidence 46775 6788999999999999999999999999999999999954344567899999999999842
Q ss_pred CCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh----
Q 037429 163 YKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS---- 237 (402)
Q Consensus 163 ~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---- 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 71 -------~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~~~~ 135 (323)
T 3cms_A 71 -------KPLSIHYGTGSM-QGILGYDTVTVSNI-----VDIQQTVGLSTQEPGD--FFTYAEFDGILGMAYPSLASEYS 135 (323)
T ss_dssp -------EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSH--HHHHSSCSEEEECSCGGGSCTTC
T ss_pred -------cEEEEEeCCCCe-EEEEEEEEEEECCe-----EEeccEEEEEEecccc--cccccCCceEEecCcchhhccCC
Confidence 899999999984 69999999999986 8999999999987652 12 3468999999998754
Q ss_pred --hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeec
Q 037429 238 --IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSV 311 (402)
Q Consensus 238 --~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~ 311 (402)
++.+|.++ + .++||+||.+.. ..|.|+||+.|+.+ .+++.|+|+... .+|.|+|++|+|+++.+.++
T Consensus 136 ~~~~~~l~~q~~i~~~~FS~~l~~~~----~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 136 IPVFDNMMNRHLVAQDLFSVYMDRNG----QESMLTLGAIDPSYYTGSLHWVPVTVQ---QYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCTTS----SCEEEEESCCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEEST
T ss_pred CCHHHHHHHCCCCCCCEEEEEECCCC----CCEEEEECCCChhhccCceEEEECccC---CeEEEEEeeEEECCEEeecC
Confidence 45677776 3 689999998852 23999999998765 467999999863 49999999999999887542
Q ss_pred ccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCc
Q 037429 312 TTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGA 389 (402)
Q Consensus 312 ~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~ 389 (402)
...++| ||| ++++||+++|++|.+++.+... . .......|+.. ..+|+|+|+|+|+
T Consensus 209 --------~~~~ai--iDSGTt~~~lP~~~~~~l~~~~~~~~~------~--~g~~~~~C~~~----~~~P~i~f~f~g~ 266 (323)
T 3cms_A 209 --------GGCQAI--LDTGTSKLVGPSSDILNIQQAIGATQN------Q--YGEFDIDCDNL----SYMPTVVFEINGK 266 (323)
T ss_dssp --------TCEEEE--ECTTCCSEEECHHHHHHHHHHHTCEEE------T--TTEEEECTTCT----TTSCCEEEEETTE
T ss_pred --------CCcEEE--EecCCccEeCCHHHHHHHHHHhCCeec------C--CCcEEEECCCC----ccCceEEEEECCE
Confidence 235689 999 9999999999999988753211 0 01111246544 5789999999999
Q ss_pred EEEEccc-cccc
Q 037429 390 SYDIEGK-FVNL 400 (402)
Q Consensus 390 ~~~l~~~-yi~~ 400 (402)
+++||++ |+..
T Consensus 267 ~~~i~~~~y~~~ 278 (323)
T 3cms_A 267 MYPLTPSAYTSQ 278 (323)
T ss_dssp EEEECHHHHEEE
T ss_pred EEEECHHHhccC
Confidence 9999999 8753
No 10
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=361.24 Aligned_cols=262 Identities=21% Similarity=0.273 Sum_probs=213.2
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCC
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNL 162 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~ 162 (402)
..|+. ++.+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+||+.. +
T Consensus 14 ~~~l~--n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~-----------~- 79 (351)
T 1tzs_A 14 KEPLI--NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQP-----------G- 79 (351)
T ss_dssp CCTTG--GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCC-----------S-
T ss_pred ceece--ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEEC-----------C-
Confidence 45664 567899999999999999999999999999999999998655567889999999999873 2
Q ss_pred CCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh----
Q 037429 163 YKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS---- 237 (402)
Q Consensus 163 ~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---- 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 80 -------~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~~~~ 144 (351)
T 1tzs_A 80 -------QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQ--TFVDAEFDGILGLGYPSLAVGGV 144 (351)
T ss_dssp -------CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCG--GGGGCSCSEEEECSCGGGSGGGC
T ss_pred -------CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEecccc--ccccCCCceEEecCCccccccCC
Confidence 899999999985 59999999999986 8999999999987662 22 3568999999998765
Q ss_pred --hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeec
Q 037429 238 --IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSV 311 (402)
Q Consensus 238 --~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~ 311 (402)
++.+|.++ + .++||+||.+... ....|.|+||+.|..+ .+++.|+|+... .+|.|.|++|+||++.+..
T Consensus 145 ~~~~~~l~~qg~i~~~~FS~~L~~~~~-~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~- 219 (351)
T 1tzs_A 145 TPVFDNMMAQNLVDLPMFSVYMSSNPE-GGAGSELIFGGYDHSHFSGSLNWVPVTKQ---AYWQIALDNIQVGGTVMFC- 219 (351)
T ss_dssp CCHHHHHHHTTCCSSSEEEEECCCCC---CTTCEEEETSCCGGGBCSCCEEEECSEE---TTEEEEEEEEEETTEEEEC-
T ss_pred CcHHHHHHHCCCCCCCEEEEEEcCCCC-CCCCCEEEECCCCHHHcCCceEEEecCCC---ceEEEEeCEEEECCceEEc-
Confidence 45677776 3 6899999988521 1237999999998765 577999999763 4999999999999987532
Q ss_pred ccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCc
Q 037429 312 TTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGA 389 (402)
Q Consensus 312 ~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~ 389 (402)
....++| ||| ++++||+++|++|.+++.+... . ......|+.. ..+|+|+|+|+|+
T Consensus 220 -------~~~~~ai--iDSGTs~~~lP~~~~~~l~~~~~~~~~-------~--g~~~~~C~~~----~~~P~i~f~f~g~ 277 (351)
T 1tzs_A 220 -------SEGCQAI--VDTGTSLITGPSDKIKQLQNAIGAAPV-------D--GEYAVECANL----NVMPDVTFTINGV 277 (351)
T ss_dssp -------TTCEEEE--ECTTCSSEEECHHHHHHHHHHHTCEEC-------S--SSEEECGGGG----GGSCCEEEEETTE
T ss_pred -------CCCceEE--eccCCcceeCCHHHHHHHHHHhCCccc-------C--CeEEEeCCCC----ccCCcEEEEECCE
Confidence 1245689 999 9999999999999988744321 0 1112357654 5789999999999
Q ss_pred EEEEccc-cccc
Q 037429 390 SYDIEGK-FVNL 400 (402)
Q Consensus 390 ~~~l~~~-yi~~ 400 (402)
+++||++ |+..
T Consensus 278 ~~~i~~~~yi~~ 289 (351)
T 1tzs_A 278 PYTLSPTAYTLL 289 (351)
T ss_dssp EEEECTTTSEEC
T ss_pred EEEECHHHhEee
Confidence 9999999 8864
No 11
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.4e-46 Score=360.67 Aligned_cols=258 Identities=17% Similarity=0.260 Sum_probs=210.6
Q ss_pred eeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCC
Q 037429 84 RIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLY 163 (402)
Q Consensus 84 ~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~ 163 (402)
.||+ ++.+.+|+++|+||||||++.|++||||+++||+|..|..|.|+.++.|||++|+||+...
T Consensus 3 ~~l~--n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------- 67 (320)
T 4aa9_A 3 EPLT--SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG------------- 67 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------
T ss_pred ccce--eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC-------------
Confidence 4665 6789999999999999999999999999999999999997777788999999999999842
Q ss_pred CCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh-----
Q 037429 164 KCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS----- 237 (402)
Q Consensus 164 ~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s----- 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++..+
T Consensus 68 ------~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~~~~~ 133 (320)
T 4aa9_A 68 ------KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGE--VFTYSEFDGILGLAYPSLASEYSV 133 (320)
T ss_dssp ------EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSH--HHHSCCCSEEEECSCGGGSCTTCC
T ss_pred ------cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccc--cccccCcccEEecCcccccccCCC
Confidence 899999999995 69999999999986 8999999999987762 12 3567999999987654
Q ss_pred -hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecc
Q 037429 238 -IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVT 312 (402)
Q Consensus 238 -~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 312 (402)
+..+|.++ + .++||+||.+. ...|.|+||++|..+ .+++.|+|+.. ..+|.|+|++|+|+++.+..+
T Consensus 134 ~~~~~l~~~g~i~~~~Fs~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~~~~- 205 (320)
T 4aa9_A 134 PVFDNMMDRHLVARDLFSVYMDRN----GQGSMLTLGAIDPSYYTGSLHWVPVTL---QQYWQFTVDSVTINGVAVACV- 205 (320)
T ss_dssp CHHHHHHHTTCSSSSEEEEECCSS----SSCCEEEETCCCGGGEEEEEEEEECSS---BTTBEEEECEEEETTEEEEST-
T ss_pred CHHHHHHhCCCCCCceEEEEeCCC----CCCeEEEEcccCHHHccCceEEEEccc---CCceEEEEeEEEECCEEeccC-
Confidence 56778776 3 68999999984 468999999998775 46799999975 359999999999999887542
Q ss_pred cccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCC-CccccEEEEEEcCc
Q 037429 313 TTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPG-FNNFASFTYHFDGA 389 (402)
Q Consensus 313 ~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~f~f~G~ 389 (402)
...++| ||| ++++||+++|++|.+++.+... .. ..|..+|. ...+|+|+|+|+|+
T Consensus 206 -------~~~~~i--iDsGtt~~~lP~~~~~~i~~~~~~~~~---------~~----g~~~~~C~~~~~~p~i~f~f~g~ 263 (320)
T 4aa9_A 206 -------GGCQAI--LDTGTSVLFGPSSDILKIQMAIGATEN---------RY----GEFDVNCGNLRSMPTVVFEINGR 263 (320)
T ss_dssp -------TCEEEE--ECTTCSSEEEEHHHHHHHHHHTTCEEC---------TT----SCEEECGGGGGGCCCEEEEETTE
T ss_pred -------CCcEEE--EECCCCcEECCHHHHHHHHHHhCCccc---------CC----CcEEEeCCCCCcCceEEEEECCE
Confidence 234688 999 9999999999999888744321 00 13333443 25789999999999
Q ss_pred EEEEccc-cccc
Q 037429 390 SYDIEGK-FVNL 400 (402)
Q Consensus 390 ~~~l~~~-yi~~ 400 (402)
+++||++ |+..
T Consensus 264 ~~~l~~~~y~~~ 275 (320)
T 4aa9_A 264 DYPLSPSAYTSK 275 (320)
T ss_dssp EEEECHHHHEEE
T ss_pred EEEECHHHhccC
Confidence 9999999 8853
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=6.1e-46 Score=359.61 Aligned_cols=259 Identities=18% Similarity=0.280 Sum_probs=212.4
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCC
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNL 162 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~ 162 (402)
..||. ++.+.+|+++|.||||||++.|+|||||+++||+|..|..+.|..++.|||++|+||+...
T Consensus 3 ~~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 68 (324)
T 1am5_A 3 TEQMK--NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG------------ 68 (324)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred eeeee--cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC------------
Confidence 46775 5788999999999999999999999999999999999986445567899999999998842
Q ss_pred CCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh----
Q 037429 163 YKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS---- 237 (402)
Q Consensus 163 ~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---- 237 (402)
|.|++.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 69 -------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 69 -------KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGP--FQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCST--TTTTCSSSEEEECSCGGGCGGGC
T ss_pred -------cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccc--cccCCCCceEEecCCccccccCC
Confidence 899999999987 69999999999987 8899999999987662 23 3568999999998765
Q ss_pred --hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeec
Q 037429 238 --IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSV 311 (402)
Q Consensus 238 --~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~ 311 (402)
++.+|.++ + .++||+||.+.. ...|.|+||+.|+.+ .+++.|+|+... .+|.|+|++|+|+++.+...
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~ 207 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGG---ANGSEVMLGGVDNSHYTGSIHWIPVTAE---KYWQVALDGITVNGQTAACE 207 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTT---CSCEEEEESSCCGGGBCSCCEEEEEEEE---TTEEEEECEEEETTEECCCC
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCC---CCCcEEEECccCHHHcCCceEEEecCCC---cEEEEEEeEEEECCceeecc
Confidence 45677776 3 689999998852 358999999998765 577999999863 49999999999999875321
Q ss_pred ccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCc
Q 037429 312 TTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGA 389 (402)
Q Consensus 312 ~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~ 389 (402)
+ .++| ||| ++++||+++|++|.+++.+. .. .......|+.. ..+|+|+|+|+|+
T Consensus 208 --------~-~~ai--iDSGTt~~~lp~~~~~~l~~~~~~~-~~--------~g~~~~~C~~~----~~~P~i~f~f~g~ 263 (324)
T 1am5_A 208 --------G-CQAI--VDTGTSKIVAPVSALANIMKDIGAS-EN--------QGEMMGNCASV----QSLPDITFTINGV 263 (324)
T ss_dssp --------C-EEEE--ECTTCSSEEECTTTHHHHHHHHTCE-EC--------CCCEECCTTSS----SSSCCEEEEETTE
T ss_pred --------C-ceEE--EecCCccEECCHHHHHHHHHHhCCc-cc--------CCcEEEeCCCc----ccCCcEEEEECCE
Confidence 1 5689 999 99999999999999887543 20 01112346544 5789999999999
Q ss_pred EEEEccc-cccc
Q 037429 390 SYDIEGK-FVNL 400 (402)
Q Consensus 390 ~~~l~~~-yi~~ 400 (402)
+++||++ |+..
T Consensus 264 ~~~i~~~~y~~~ 275 (324)
T 1am5_A 264 KQPLPPSAYIEG 275 (324)
T ss_dssp EEEECHHHHEEE
T ss_pred EEEECHHHhccc
Confidence 9999999 8764
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.4e-46 Score=360.73 Aligned_cols=263 Identities=21% Similarity=0.329 Sum_probs=213.6
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCC
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNL 162 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~ 162 (402)
..|| .+.+.+|+++|.||||||++.|+|||||+++||+|..|..+.|..++.|||++|+||+...
T Consensus 4 ~~~l---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------ 68 (329)
T 1htr_B 4 YEPM---AYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG------------ 68 (329)
T ss_dssp CCGG---GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE------------
T ss_pred eeee---EEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC------------
Confidence 4677 4778999999999999999999999999999999999986445567899999999998842
Q ss_pred CCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh----
Q 037429 163 YKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS---- 237 (402)
Q Consensus 163 ~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---- 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 69 -------~~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~~~~ 133 (329)
T 1htr_B 69 -------QTFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGT--NFVYAQFDGIMGLAYPALSVDEA 133 (329)
T ss_dssp -------EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSG--GGGGCSCCEEEECCCCSCCCTTC
T ss_pred -------cEEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEcccc--ccccCCCceEEecCCCcccccCC
Confidence 899999999987 69999999999976 8999999999987662 23 3568999999998765
Q ss_pred --hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeec
Q 037429 238 --IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSV 311 (402)
Q Consensus 238 --~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~ 311 (402)
++++|.++ + .++||+||.+... ...|.|+||+.|..+ .+++.|+|+... .+|.|+|++|+|+++.+...
T Consensus 134 ~~~~~~l~~qg~i~~~~Fs~~L~~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~ 208 (329)
T 1htr_B 134 TTAMQGMVQEGALTSPVFSVYLSNQQG--SSGGAVVFGGVDSSLYTGQIYWAPVTQE---LYWQIGIEEFLIGGQASGWC 208 (329)
T ss_dssp CSHHHHHHHTTCSSSSEEEEEECSSCS--SEEEEEEESSCCGGGEEEEEEEEEBCSS---SSCEEEECEEEETTEECCTT
T ss_pred CCHHHHHHhcCCCCCCEEEEEEcCCCC--CCCcEEEEcccCHHHcCCceEEEECCCC---ceEEEEEeEEEECCceeeec
Confidence 55677776 3 6899999988521 237999999998765 467999999863 59999999999999875411
Q ss_pred ccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCc
Q 037429 312 TTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGA 389 (402)
Q Consensus 312 ~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~ 389 (402)
....++| ||| ++++||+++|++|.+++.+... ........|+.. ..+|+|+|+|+|+
T Consensus 209 -------~~~~~ai--iDSGTt~~~lp~~~~~~l~~~~~~~~~--------~~g~~~~~C~~~----~~~P~i~f~f~g~ 267 (329)
T 1htr_B 209 -------SEGCQAI--VDTGTSLLTVPQQYMSALLQATGAQED--------EYGQFLVNCNSI----QNLPSLTFIINGV 267 (329)
T ss_dssp -------TTCEEEE--ECTTCCSEEEEGGGHHHHHHHHTCEEC--------TTSCEEECGGGG----GGSCCEEEEETTE
T ss_pred -------CCCceEE--EecCCccEECCHHHHHHHHHHhCCeec--------CCCeEEEeCCCc----ccCCcEEEEECCE
Confidence 1245689 999 9999999999999988754321 011112357654 5789999999999
Q ss_pred EEEEccc-ccccc
Q 037429 390 SYDIEGK-FVNLF 401 (402)
Q Consensus 390 ~~~l~~~-yi~~~ 401 (402)
+++||++ |+...
T Consensus 268 ~~~i~~~~y~~~~ 280 (329)
T 1htr_B 268 EFPLPPSSYILSN 280 (329)
T ss_dssp EEEECHHHHEEEC
T ss_pred EEEECHHHhcccC
Confidence 9999999 87653
No 14
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.1e-45 Score=357.26 Aligned_cols=255 Identities=18% Similarity=0.272 Sum_probs=209.7
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCC--CCCCc-------ccCCCCCcCCCCCCccccCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQ--PCKNC-------YRQQFPIYNSVASSTYRKLPCD 152 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~f~p~~SsT~~~v~C~ 152 (402)
...|+ ..++.+|+++|.||||+|++.|+|||||+++||+|. +|..| .|+.++.|||++|+||+...
T Consensus 3 v~~~l---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 2qzx_A 3 VAVTL---HNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN-- 77 (342)
T ss_dssp EEEEE---EECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE--
T ss_pred eeEEE---ecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC--
Confidence 45677 457899999999999999999999999999999866 67644 34677899999999999843
Q ss_pred CcCCCCCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecC
Q 037429 153 HPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLS 232 (402)
Q Consensus 153 s~~C~~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg 232 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++.... .+||||||
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~--------~~GilGLg 127 (342)
T 2qzx_A 78 -----------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTSA--------RKGILGIG 127 (342)
T ss_dssp -----------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECS--------SSCEEECS
T ss_pred -----------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecCC--------CcCEEEEc
Confidence 899999999998889999999999976 899999999987543 78999999
Q ss_pred CCCC--------hhhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEE
Q 037429 233 SSPD--------SIVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLID 300 (402)
Q Consensus 233 ~~~~--------s~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~ 300 (402)
++.. +++.||.++ + .++||+||.+. ....|.|+||+.|+.+ .+++.|+|+.... +|.|.|++
T Consensus 128 ~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~v~l~~ 201 (342)
T 2qzx_A 128 FQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSA---EASTGQIIFGGIDKAKYSGSLVDLPITSEK---KLTVGLRS 201 (342)
T ss_dssp CGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCT---TCSEEEEEETEEETTSBSSCCEEEECCCSS---SCEEEEEE
T ss_pred cccccCCCccCccHHHHHHHCCCcCccEEEEEeCCC---CCCCeEEEECccchhhEecceEEEeccCCc---eEEEEEeE
Confidence 9765 677889887 3 58999999874 2457999999988765 5779999998753 89999999
Q ss_pred EEECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCcc
Q 037429 301 ISVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNN 378 (402)
Q Consensus 301 i~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~ 378 (402)
|+||++.+.. ..++| ||| ++++||+++|++|.+++.+... +.+. ....|..+|. .
T Consensus 202 i~v~g~~~~~----------~~~ai--iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~------~~~~~~~~C~--~ 258 (342)
T 2qzx_A 202 VNVRGRNVDA----------NTNVL--LDSGTTISYFTRSIVRNILYAIGAQMK---FDSA------GNKVYVADCK--T 258 (342)
T ss_dssp EEETTEEEEE----------EEEEE--ECTTCSSEEECHHHHHHHHHHHTCEEE---ECTT------SCEEEEECTT--C
T ss_pred EEECCEecCC----------CcCEE--EeCCCCCEEcCHHHHHHHHHHhCCeee---eccC------CCcEEEEECC--C
Confidence 9999988754 23588 999 9999999999999999866542 1111 1124444553 3
Q ss_pred ccEEEEEE-cCcEEEEccc-cccc
Q 037429 379 FASFTYHF-DGASYDIEGK-FVNL 400 (402)
Q Consensus 379 ~P~i~f~f-~G~~~~l~~~-yi~~ 400 (402)
+|+|+|+| +|++++||++ |+..
T Consensus 259 ~p~i~f~f~~g~~~~i~~~~~~~~ 282 (342)
T 2qzx_A 259 SGTIDFQFGNNLKISVPVSEFLFQ 282 (342)
T ss_dssp CCEEEEEETTTEEEEEEGGGGEEC
T ss_pred CCcEEEEECCCcEEEEcHHHhccc
Confidence 79999999 5899999999 8764
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.6e-45 Score=355.63 Aligned_cols=252 Identities=17% Similarity=0.257 Sum_probs=208.4
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCC--CCCCc-------ccCCCCCcCCCCCCccccCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQ--PCKNC-------YRQQFPIYNSVASSTYRKLPCD 152 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~f~p~~SsT~~~v~C~ 152 (402)
...|+ ...+.+|+++|.||||||++.|+|||||+++||+|. +|..| .|+.++.|||++|+||+...
T Consensus 3 ~~~~l---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~-- 77 (334)
T 1j71_A 3 VPTTL---INEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN-- 77 (334)
T ss_dssp EEEEE---EECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE--
T ss_pred eeEEE---ecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC--
Confidence 45677 456899999999999999999999999999999976 67754 45678899999999999842
Q ss_pred CcCCCCCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecC
Q 037429 153 HPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLS 232 (402)
Q Consensus 153 s~~C~~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg 232 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++.... .+||||||
T Consensus 78 -----------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~--------~~GilGLg 127 (334)
T 1j71_A 78 -----------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTSV--------DQGIMGIG 127 (334)
T ss_dssp -----------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS--------SSCEEECS
T ss_pred -----------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecCC--------CccEEEEc
Confidence 899999999998889999999999976 899999999986543 78999999
Q ss_pred CCCC--------hhhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEE
Q 037429 233 SSPD--------SIVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLID 300 (402)
Q Consensus 233 ~~~~--------s~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~ 300 (402)
++.. +++.||.++ + .++||+||.+. ....|.|+||+.|+.+ .+.+.|+|+... .+|.|+|++
T Consensus 128 ~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~ 201 (334)
T 1j71_A 128 FTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSE---DASTGKIIFGGVDNAKYTGTLTALPVTSS---VELRVHLGS 201 (334)
T ss_dssp CGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCT---TCSEEEEEETEEETTSEEEEEEEEECCCS---SSCEEEEEE
T ss_pred CCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCC---CCCCeEEEEeeechHHccCceEEEEccCC---CeEEEEEeE
Confidence 9865 677889887 3 58999999874 2468999999988765 467999999875 389999999
Q ss_pred EEECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCcccc-CCCCCc
Q 037429 301 ISVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYT-NPPGFN 377 (402)
Q Consensus 301 i~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~-~~~~~~ 377 (402)
|+||++.+.. ..++| ||| ++++||+++|++|.+++.+.... . ...|. .+|.
T Consensus 202 i~v~g~~~~~----------~~~~i--iDSGTt~~~lP~~~~~~l~~~~~~~~~~-------~-----~~~~~~~~C~-- 255 (334)
T 1j71_A 202 INFDGTSVST----------NADVV--LDSGTTITYFSQSTADKFARIVGATWDS-------R-----NEIYRLPSCD-- 255 (334)
T ss_dssp EEETTEEEEE----------EEEEE--ECTTCSSEEECHHHHHHHHHHHTCEEET-------T-----TTEEECSSSC--
T ss_pred EEECCEeccC----------CccEE--EeCCCCcEecCHHHHHHHHHHcCCcccC-------C-----CceEEEEcCC--
Confidence 9999998754 23588 999 99999999999999988654320 0 01233 3443
Q ss_pred cccEEEEEE-cCcEEEEccc-cccc
Q 037429 378 NFASFTYHF-DGASYDIEGK-FVNL 400 (402)
Q Consensus 378 ~~P~i~f~f-~G~~~~l~~~-yi~~ 400 (402)
.+|+|+|+| +|++++||++ |+..
T Consensus 256 ~~p~i~f~f~~g~~~~i~~~~y~~~ 280 (334)
T 1j71_A 256 LSGDAVFNFDQGVKITVPLSELILK 280 (334)
T ss_dssp CCSEEEEEESTTCEEEEEGGGGEEE
T ss_pred CCCceEEEEcCCcEEEECHHHheee
Confidence 269999999 5899999999 8764
No 16
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.6e-45 Score=369.97 Aligned_cols=257 Identities=18% Similarity=0.252 Sum_probs=208.0
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...|+. ++.+.+|+++|.||||||++.|+|||||+++||+|..|..+.|+.++.|||++|+||+.. +
T Consensus 128 ~~~~L~--n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~-----------~ 194 (453)
T 2bju_A 128 DNIELV--DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKD-----------G 194 (453)
T ss_dssp EEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEE-----------E
T ss_pred CceeeE--ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeEC-----------C
Confidence 356775 568899999999999999999999999999999999998666677889999999999884 2
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCC--Cccccc-CCccceeeecCCCCCh-
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQ--NIQFAS-RGVISGILGLSSSPDS- 237 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~--~~~~~~-~~~~~GIlGLg~~~~s- 237 (402)
|.|.+.|++|+ +.|.+++|+|++++. .++ +.|||++... +. .| ....+||||||++.++
T Consensus 195 --------~~~~i~YgdGs-~~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~--~f~~~~~dGIlGLg~~~~s~ 257 (453)
T 2bju_A 195 --------TKVEMNYVSGT-VSGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEP--TYTASTFDGILGLGWKDLSI 257 (453)
T ss_dssp --------EEEEEECSSSE-EEEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTT--HHHHSSCCEEEECSCGGGST
T ss_pred --------cEEEEEcCCCC-eEEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCc--cccccCCceeEeccCCcccc
Confidence 89999999999 469999999999986 888 9999999876 51 22 3568999999998654
Q ss_pred -----hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEe
Q 037429 238 -----IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRS 308 (402)
Q Consensus 238 -----~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 308 (402)
++++|.++ + .++||+||.+. ....|.|+|||.|+.+ .+++.|+|+... .+|.|.|+ |+||+ .+
T Consensus 258 ~~~~~~~~~L~~qg~i~~~~FS~~L~~~---~~~~G~l~fGg~D~~~y~G~l~~~pv~~~---~~w~V~l~-I~Vgg-~~ 329 (453)
T 2bju_A 258 GSVDPIVVELKNQNKIENALFTFYLPVH---DKHTGFLTIGGIEERFYEGPLTYEKLNHD---LYWQITLD-AHVGN-IM 329 (453)
T ss_dssp TCCCCHHHHHHHTTSSSSCEEEEECCBT---TTBCEEEEESSCCGGGEEEEEEEEEEEEE---TTEEEEEE-EEETT-EE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEeCCC---CCCCeEEEECCCCHHHcCCceEEEecCCC---ceEEEEEE-EEECc-EE
Confidence 44677776 4 68999999985 2468999999998765 467999999763 49999999 99999 33
Q ss_pred eecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEE
Q 037429 309 RSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHF 386 (402)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f 386 (402)
+ . ..++| ||| ++++||+++|++|.+++.+.. ...+. .....|+. ..+|+|+|+|
T Consensus 330 -~--~-------~~~aI--iDSGTsl~~lP~~~~~~l~~~i~~~~------~~~g~-~~~v~C~~-----~~~P~itf~f 385 (453)
T 2bju_A 330 -L--E-------KANCI--VDSGTSAITVPTDFLNKMLQNLDVIK------VPFLP-FYVTLCNN-----SKLPTFEFTS 385 (453)
T ss_dssp -E--E-------EEEEE--ECTTCCSEEECHHHHHHHTTTSSCEE------CTTSS-CEEEETTC-----TTCCCEEEEC
T ss_pred -e--c-------cccEE--EcCCCCeEecCHHHHHHHHHHhCCcc------cCCCc-eEEEecCC-----CCCCcEEEEE
Confidence 2 1 34689 999 999999999999987764321 11010 11234554 4689999999
Q ss_pred cCcEEEEccc-cccc
Q 037429 387 DGASYDIEGK-FVNL 400 (402)
Q Consensus 387 ~G~~~~l~~~-yi~~ 400 (402)
+|++++||++ |+..
T Consensus 386 gg~~~~l~~~~yi~~ 400 (453)
T 2bju_A 386 ENGKYTLEPEYYLQH 400 (453)
T ss_dssp SSCEEEECHHHHEEE
T ss_pred CCEEEEECHHHhEee
Confidence 9999999999 8764
No 17
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=8.1e-45 Score=354.04 Aligned_cols=262 Identities=16% Similarity=0.290 Sum_probs=211.7
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCc--ccCCCCCcCCCCCCccccCCCCCcCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNC--YRQQFPIYNSVASSTYRKLPCDHPLCQGD 159 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C--~~~~~~~f~p~~SsT~~~v~C~s~~C~~~ 159 (402)
..+||. ++.+.+|+++|.||||||++.|++||||+++||+|..|..| .|..++.|||++|+||+..
T Consensus 8 ~~~~l~--n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~---------- 75 (341)
T 3k1w_A 8 SSVILT--NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHN---------- 75 (341)
T ss_dssp EEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEE----------
T ss_pred ccccce--EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeEC----------
Confidence 567886 67899999999999999999999999999999999999832 3356789999999999873
Q ss_pred CCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh-
Q 037429 160 NNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS- 237 (402)
Q Consensus 160 ~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s- 237 (402)
+ |.|.+.|++|+ +.|.+++|+|+|++. .+ ++.|||++...+. .| ....+||||||++..+
T Consensus 76 -~--------~~~~i~Yg~gs-~~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~--~~~~~~~~GilGLg~~~~s~ 137 (341)
T 3k1w_A 76 -G--------TELTLRYSTGT-VSGFLSQDIITVGGI-----TV-TQMFGEVTEMPAL--PFMLAEFDGVVGMGFIEQAI 137 (341)
T ss_dssp -E--------EEEEEEETTEE-EEEEEEEEEEEETTE-----EE-EEEEEEEEECCHH--HHTTCSSSEEEECSCGGGCG
T ss_pred -C--------CEEEEEECCcE-EEEEEEEEEEEECCc-----ee-eEEEEEEEEcccc--ccccCCcceEEECCchhhcc
Confidence 2 89999999998 569999999999987 88 9999999988761 13 3568999999998765
Q ss_pred -----hhhhhhhh--c-cCceEEeeccCCC-CCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEE
Q 037429 238 -----IVMQLSDV--V-DKRFSYCLVPFTD-ALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRR 307 (402)
Q Consensus 238 -----~~~ql~~~--~-~~~FS~~l~~~~~-~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 307 (402)
++.+|.++ + .++||+||.+... .....|.|+||++|..+ .+++.|+|+.. ..+|.|+|++|+|+++.
T Consensus 138 ~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 138 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK---TGVWQIQMKGVSVGSST 214 (341)
T ss_dssp GGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS---TTSCEEEECCEEETTEE
T ss_pred cCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC---CCEEEEEEeEEEECCEE
Confidence 56778877 3 6899999998521 11348999999998775 46799999985 35999999999999987
Q ss_pred eeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCC-CccccEEEE
Q 037429 308 SRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPG-FNNFASFTY 384 (402)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~f 384 (402)
+... ....+| ||| ++++||+++|++|.+++.+... ... |..+|. ...+|+|+|
T Consensus 215 ~~~~--------~~~~~i--iDsGtt~~~lP~~~~~~i~~~~~~~~~---------~~g-----~~~~C~~~~~~p~i~f 270 (341)
T 3k1w_A 215 LLCE--------DGCLAL--VDTGASYISGSTSSIEKLMEALGAKKR---------LFD-----YVVKCNEGPTLPDISF 270 (341)
T ss_dssp EECT--------TCEEEE--ECTTCSSEEECHHHHHHHHHHHTCEEC---------SSC-----EEEEGGGGGGCCCEEE
T ss_pred eecC--------CCCEEE--EECCCChhcCCHHHHHHHHHHcCCeec---------CCC-----eEEeCCCCCcCCcEEE
Confidence 5432 234688 999 9999999999999988854321 111 333443 257899999
Q ss_pred EEcCcEEEEccc-cccc
Q 037429 385 HFDGASYDIEGK-FVNL 400 (402)
Q Consensus 385 ~f~G~~~~l~~~-yi~~ 400 (402)
+|+|++++||++ |+..
T Consensus 271 ~f~g~~~~l~~~~~~~~ 287 (341)
T 3k1w_A 271 HLGGKEYTLTSADYVFQ 287 (341)
T ss_dssp EETTEEEEECHHHHBCC
T ss_pred EECCEEEEECHHHheeE
Confidence 999999999999 8764
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.6e-44 Score=351.63 Aligned_cols=255 Identities=18% Similarity=0.276 Sum_probs=209.2
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEe-----CCCCCCcccCCCCCcCCCCCCccccCCCCCcCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQ-----CQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLC 156 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~-----~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C 156 (402)
...|+ ...+.+|+++|.||||||++.|+|||||+++||+ |.+|..|. .++.|||++|+||+.+.
T Consensus 3 i~~~l---~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------ 71 (339)
T 3fv3_A 3 ISLSL---INEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK--SSGTFTPSSSSSYKNLG------ 71 (339)
T ss_dssp EEEEE---EECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT--TTCCBCGGGCTTCEEEE------
T ss_pred eeeEE---EcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC--CCCcCCCccCcceeeCC------
Confidence 46677 5678899999999999999999999999999998 66555664 57899999999999853
Q ss_pred CCCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecCCCCC
Q 037429 157 QGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPD 236 (402)
Q Consensus 157 ~~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~ 236 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+||||||++..
T Consensus 72 -------------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~--------~~GilGLg~~~~ 125 (339)
T 3fv3_A 72 -------------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV--------DQGILGIGYTSN 125 (339)
T ss_dssp -------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS--------SSCEEECSCGGG
T ss_pred -------------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC--------CceeEEecCccc
Confidence 899999999988889999999999987 899999999997665 699999999875
Q ss_pred h----------------hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEE
Q 037429 237 S----------------IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHL 296 (402)
Q Consensus 237 s----------------~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v 296 (402)
+ ++.||.++ + .++||+||.+. ....|.|+||++|..+ .+++.|+|+... .+|.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v 199 (339)
T 3fv3_A 126 EAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSP---SAETGTIIFGGVDNAKYSGKLVAEQVTSS---QALTI 199 (339)
T ss_dssp CCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCT---TCSEEEEEETEEETTSBSSCCEEEEBCCS---SSCEE
T ss_pred cccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCC---CCCCeEEEEeeechHHeecceEEEecccC---ccEEE
Confidence 4 67788877 3 58999999874 2458999999988765 577999999874 38999
Q ss_pred EEEEEEECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCC
Q 037429 297 SLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPP 374 (402)
Q Consensus 297 ~l~~i~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~ 374 (402)
+|++|+|+++.+... .++| ||| ++++||+++|++|.+++.+.... ... . ..-|..+|
T Consensus 200 ~l~~i~v~g~~~~~~----------~~~i--iDSGtt~~~lP~~~~~~i~~~~~~~~~~--~~~--~-----~~~~~~~C 258 (339)
T 3fv3_A 200 SLASVNLKGSSFSFG----------DGAL--LDSGTTLTYFPSDFAAQLADKAGARLVQ--VAR--D-----QYLYFIDC 258 (339)
T ss_dssp EEEEEEESSCEEEEE----------EEEE--ECTTBSSEEECHHHHHHHHHHHTCEEEE--EET--T-----EEEEEECT
T ss_pred EEEEEEECCEeecCC----------ccEE--EeCCCCCEecCHHHHHHHHHHcCCEEcc--ccc--c-----CceEEEec
Confidence 999999999987542 3588 999 99999999999999998754321 000 0 01233344
Q ss_pred CCccccEEEEEEc-CcEEEEccc-cccc
Q 037429 375 GFNNFASFTYHFD-GASYDIEGK-FVNL 400 (402)
Q Consensus 375 ~~~~~P~i~f~f~-G~~~~l~~~-yi~~ 400 (402)
....+|+|+|+|+ |++++||++ |+..
T Consensus 259 ~~~~~p~i~f~f~~g~~~~v~~~~~~~~ 286 (339)
T 3fv3_A 259 NTDTSGTTVFNFGNGAKITVPNTEYVYQ 286 (339)
T ss_dssp TCCCCSEEEEEETTSCEEEEEGGGGEEE
T ss_pred CCCCCCcEEEEECCCCEEEECHHHheee
Confidence 3245799999996 899999999 8764
No 19
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.8e-44 Score=351.67 Aligned_cols=256 Identities=19% Similarity=0.293 Sum_probs=209.5
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCC--CCCc-------ccCCCCCcCCCCCCccccCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQP--CKNC-------YRQQFPIYNSVASSTYRKLPCD 152 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~--C~~C-------~~~~~~~f~p~~SsT~~~v~C~ 152 (402)
..+|+ ...+.+|+++|.||||||++.|++||||+++||+|.. |..| .|..++.|||++|+||+.+.
T Consensus 3 v~~~l---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 3pvk_A 3 VPVTL---HNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN-- 77 (342)
T ss_dssp EEEEE---EECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE--
T ss_pred cceEE---ecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC--
Confidence 45667 5678999999999999999999999999999998653 5322 23467899999999999853
Q ss_pred CcCCCCCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecC
Q 037429 153 HPLCQGDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLS 232 (402)
Q Consensus 153 s~~C~~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg 232 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++.... .+||||||
T Consensus 78 -----------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~--------~~GilGLg 127 (342)
T 3pvk_A 78 -----------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTSI--------DQGILGVG 127 (342)
T ss_dssp -----------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS--------SSCEEECS
T ss_pred -----------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccCC--------CccEEEec
Confidence 899999999998889999999999986 899999999986543 79999999
Q ss_pred CCC-------Chhhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEE
Q 037429 233 SSP-------DSIVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDI 301 (402)
Q Consensus 233 ~~~-------~s~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i 301 (402)
++. .+++.||.++ + .++||+||.+. ....|.|+||++|..+ .+++.|+|+.... +|.|+|++|
T Consensus 128 ~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~---~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~v~l~~i 201 (342)
T 3pvk_A 128 YKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSP---DAATGQIIFGGVDNAKYSGSLIALPVTSDR---ELRISLGSV 201 (342)
T ss_dssp CGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCT---TCSEEEEEETEEETTSBSSCCEEEECCCSS---SCEEEEEEE
T ss_pred CccccccccCCcHHHHHHhcCCCCCceEEEEeCCC---CCCCcEEEECccCccceeeeeEEeecCccc---eEEEEEeEE
Confidence 987 3688889887 3 58999999874 2457999999988765 5779999998753 899999999
Q ss_pred EECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccc
Q 037429 302 SVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNF 379 (402)
Q Consensus 302 ~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 379 (402)
+|+++.+... ...+| ||| ++++||+++|++|.+++.+.... . .. ...+|..+|. ..
T Consensus 202 ~v~g~~~~~~---------~~~~i--iDSGtt~~~lP~~~~~~i~~~~~~~~~~---~----~~--~~~~~~~~C~--~~ 259 (342)
T 3pvk_A 202 EVSGKTINTD---------NVDVL--LDSGTTITYLQQDLADQIIKAFNGKLTQ---D----SN--GNSFYEVDCN--LS 259 (342)
T ss_dssp EETTEEEEEE---------EEEEE--ECTTCSSEEECHHHHHHHHHHTTCEEEE---C----TT--SCEEEEECSC--CC
T ss_pred EECCEEecCC---------CceEE--EeCCCCCeecCHHHHHHHHHHcCCeecc---c----CC--CceEEEEecC--CC
Confidence 9999987652 23688 999 99999999999999988654431 0 00 1235556664 35
Q ss_pred cEEEEEEc-CcEEEEccc-cccc
Q 037429 380 ASFTYHFD-GASYDIEGK-FVNL 400 (402)
Q Consensus 380 P~i~f~f~-G~~~~l~~~-yi~~ 400 (402)
|+|+|+|+ |++++||++ |+..
T Consensus 260 p~i~f~f~~g~~~~vp~~~~~~~ 282 (342)
T 3pvk_A 260 GDVVFNFSKNAKISVPASEFAAS 282 (342)
T ss_dssp SEEEEEESTTCEEEEEGGGGEEC
T ss_pred CceEEEECCCCEEEEcHHHheee
Confidence 99999998 899999999 8764
No 20
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.5e-44 Score=353.34 Aligned_cols=265 Identities=17% Similarity=0.230 Sum_probs=211.7
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC-CcccCCCCCcCCCCCCccccCCCCCcCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK-NCYRQQFPIYNSVASSTYRKLPCDHPLCQGDN 160 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~-~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~ 160 (402)
...|+. ++.+.+|+++|.||||+|++.|+|||||+++||+|..|. ...|..++.|||++|+||+...
T Consensus 8 ~~~~l~--~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~---------- 75 (361)
T 1mpp_A 8 DTPGLY--DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETD---------- 75 (361)
T ss_dssp EEEEEE--ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEE----------
T ss_pred ceEEee--cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecC----------
Confidence 346775 567899999999999999999999999999999999998 3233457889999999998842
Q ss_pred CCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCC-----ccccc-CCccceeeecCCC
Q 037429 161 NLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQN-----IQFAS-RGVISGILGLSSS 234 (402)
Q Consensus 161 ~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~-----~~~~~-~~~~~GIlGLg~~ 234 (402)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ . .| ....+||||||++
T Consensus 76 ---------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~--~~~~~~~~GilGLg~~ 138 (361)
T 1mpp_A 76 ---------YNLNITYGTGG-ANGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQS--PDSELFLDGIFGAAYP 138 (361)
T ss_dssp ---------EEEEEECSSCE-EEEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSC--TTCSSCCCEEEECSCG
T ss_pred ---------CeEEEEECCce-EEEEEEEEEEEECCE-----EEeceEEEEEEeccCcccccc--ccccCCCCCEEEeCCc
Confidence 89999999999 569999999999976 899999999998654 1 22 3568999999998
Q ss_pred CChh------------hhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCC-CceeEEE
Q 037429 235 PDSI------------VMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPG-SFYYHLS 297 (402)
Q Consensus 235 ~~s~------------~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~-~~~y~v~ 297 (402)
.++. +.+|.++ + .++||+||.+. ...|.|+||+.|..+ .+.+.|+|+..... ..+|.|.
T Consensus 139 ~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~----~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~ 214 (361)
T 1mpp_A 139 DNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN----DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 214 (361)
T ss_dssp GGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS----SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred ccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC----CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEE
Confidence 6554 4577776 3 68999999874 457999999998765 57799999987643 2389999
Q ss_pred EEEEEECCEEeeecccccccccCCCCeeee-ecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCC
Q 037429 298 LIDISVGTRRSRSVTTTLARSRTVTNDLPG-YDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPP 374 (402)
Q Consensus 298 l~~i~vg~~~~~~~~~~~~~~~~~~~~i~~-iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~ 374 (402)
|++|+|+++.+.... +.-++ ||| ++++||+++|++|.+++.+... ... ......|+..
T Consensus 215 l~~i~v~~~~~~~~~----------~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~~--g~~~~~C~~~-- 275 (361)
T 1mpp_A 215 VTGVKIDGSDAVSFD----------GAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ESQ--QGYTVPCSKY-- 275 (361)
T ss_dssp EEEEEETTEEEEEEE----------EEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EET--TEEEEEHHHH--
T ss_pred EeEEEECCeeeccCC----------CCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CCC--CcEEEECCCc--
Confidence 999999998764321 13345 999 9999999999999998865432 110 1112357754
Q ss_pred CCccc-cEEEEEE--c-----CcEEEEccc-cccc
Q 037429 375 GFNNF-ASFTYHF--D-----GASYDIEGK-FVNL 400 (402)
Q Consensus 375 ~~~~~-P~i~f~f--~-----G~~~~l~~~-yi~~ 400 (402)
..+ |+|+|+| + |++++||++ |+..
T Consensus 276 --~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~ 308 (361)
T 1mpp_A 276 --QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLP 308 (361)
T ss_dssp --TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEE
T ss_pred --ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEe
Confidence 466 9999999 7 899999999 8765
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.1e-44 Score=354.06 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=209.1
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...|+. ++.+.+|+++|.||||||++.|+|||||+++||+|..|..+.|..++.|||++|+||+.. +
T Consensus 52 ~~~pl~--~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~-----------~ 118 (375)
T 1miq_A 52 DVIELD--DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKD-----------G 118 (375)
T ss_dssp BCCCGG--GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEE-----------E
T ss_pred ceEEcc--cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEEC-----------C
Confidence 346774 567899999999999999999999999999999999998666667889999999999884 2
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeC----CCCcccccCCccceeeecCCCCCh
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSND----NQNIQFASRGVISGILGLSSSPDS 237 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~GIlGLg~~~~s 237 (402)
|.|.+.|++|+. .|.+++|+|+|++. .+++ .|||++. ... ......+||||||++.++
T Consensus 119 --------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~~---f~~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 119 --------TKVDITYGSGTV-KGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEPI---YSSVEFDGILGLGWKDLS 180 (375)
T ss_dssp --------EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTTH---HHHSCCCEEEECSSCCTT
T ss_pred --------cEEEEEeCCCeE-EEEEEEEEEEEcCc-----eECc-EEEEEEeccccccc---cccCCCceEEeCCCCccc
Confidence 899999999994 69999999999986 8899 9999998 432 113568999999998765
Q ss_pred ------hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEE
Q 037429 238 ------IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRR 307 (402)
Q Consensus 238 ------~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 307 (402)
++.+|.++ + .++||+||.+.. ...|.|+||+.|..+ .+++.|+|+.. ..+|.|.|+ |+||++.
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~-i~v~g~~ 253 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHD---VHAGYLTIGGIEEKFYEGNITYEKLNH---DLYWQIDLD-VHFGKQT 253 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTC---TTEEEEEESSCCGGGEEEEEEEEEBSS---SSSSEEEEE-EEETTEE
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCC---CCCeEEEEcccCHHHcCCceEEEecCC---CceEEEEEE-EEECCEE
Confidence 45677776 4 689999999852 368999999998765 46799999975 359999999 9999987
Q ss_pred eeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEE
Q 037429 308 SRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYH 385 (402)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~ 385 (402)
+ . ..++| ||| ++++||+++|++|.+++.+... .. .......|+. ..+|+|+|+
T Consensus 254 ~----~-------~~~ai--iDSGTs~~~lP~~~~~~l~~~~~~~~~-----~~--~g~~~~~C~~-----~~~P~i~f~ 308 (375)
T 1miq_A 254 M----E-------KANVI--VDSGTTTITAPSEFLNKFFANLNVIKV-----PF--LPFYVTTCDN-----KEMPTLEFK 308 (375)
T ss_dssp E----E-------EEEEE--ECTTBSSEEECHHHHHHHHHHHTCEEC-----TT--SSCEEEETTC-----TTCCCEEEE
T ss_pred c----c-------cceEE--ecCCCccEEcCHHHHHHHHHHhCCccc-----CC--CCeEEEECCC-----CCCCcEEEE
Confidence 6 1 24689 999 9999999999999998855322 11 1111235664 367999999
Q ss_pred EcCcEEEEccc-cccc
Q 037429 386 FDGASYDIEGK-FVNL 400 (402)
Q Consensus 386 f~G~~~~l~~~-yi~~ 400 (402)
|+|++++||++ |+..
T Consensus 309 f~g~~~~l~~~~yi~~ 324 (375)
T 1miq_A 309 SANNTYTLEPEYYMNP 324 (375)
T ss_dssp CSSCEEEECGGGSEEE
T ss_pred ECCEEEEECHHHhEee
Confidence 99999999999 8765
No 22
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=6.7e-44 Score=352.72 Aligned_cols=282 Identities=22% Similarity=0.356 Sum_probs=213.9
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCC--
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDN-- 160 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~-- 160 (402)
..|++. +..+.+|+++|+|||| |+|||||+++||+|.+|. +|+.++|.++.|....
T Consensus 4 ~~pv~~-~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~ 61 (381)
T 1t6e_X 4 LAPVTK-DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAY 61 (381)
T ss_dssp EEEEEE-CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSS
T ss_pred EEeEEe-cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCC
Confidence 456631 4678999999999998 999999999999988651 3566778777775321
Q ss_pred CCCCCCC--------CC-C-ceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccE----EEEeeeCCCCcccccCCccc
Q 037429 161 NLYKCVD--------QQ-C-VYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNI----IFGCSNDNQNIQFASRGVIS 226 (402)
Q Consensus 161 ~~~~C~~--------~~-~-~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~----~fG~~~~~~~~~~~~~~~~~ 226 (402)
....|.. ++ | .|.+.|+||+.+.|.+++|+|+|++.++. ..++++ .|||++.+... .+....|
T Consensus 62 ~~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~--~~~~~~d 138 (381)
T 1t6e_X 62 PAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLA--SLPRGST 138 (381)
T ss_dssp CCTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGT--TSCTTEE
T ss_pred CCCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccC--CCCCCCc
Confidence 1124542 12 7 59999999998789999999999864321 145554 67999876321 1235789
Q ss_pred eeeecCCCCChhhhhhhhh--ccCceEEeeccCCCCCCCCceEEECCCCCC---CCCCeeeeeecCCCCCceeEEEEEEE
Q 037429 227 GILGLSSSPDSIVMQLSDV--VDKRFSYCLVPFTDALMAPSIVKFGNDIPP---LSGTVQATTFVPPPGSFYYHLSLIDI 301 (402)
Q Consensus 227 GIlGLg~~~~s~~~ql~~~--~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~---~~~~~~~tp~~~~~~~~~y~v~l~~i 301 (402)
||||||++++|+++||..+ ..++||+||++. ..|.|+||+.+.. +.+.+.|+|++.++...+|.|+|++|
T Consensus 139 GIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i 213 (381)
T 1t6e_X 139 GVAGLANSGLALPAQVASAQKVANRFLLCLPTG-----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSI 213 (381)
T ss_dssp EEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEE
T ss_pred eEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEE
Confidence 9999999999999999876 579999999873 5799999997653 35789999999865434677999999
Q ss_pred EECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhh-----ccccccCCCCCCCCccccCCC
Q 037429 302 SVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDA-----LKLERIGRVPEGLQLCYTNPP 374 (402)
Q Consensus 302 ~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~-----~~~~~~~~~~~~~~~C~~~~~ 374 (402)
+||++.+.++...|. .+++| ||| ++++||+++|++|.++|.+++.. .+++++......+..||..++
T Consensus 214 ~vg~~~~~~~~~~~~----~~~~i--iDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 214 VVGDTRVPVPEGALA----TGGVM--LSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp EETTEECCCCTTCSC----TTCEE--ECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred EEcCEEecCCHHHcc----CCCEE--EECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 999999877655551 46799 999 99999999999999999987742 113333122234678998765
Q ss_pred CC-----ccccEEEEEEc-CcEEEEccc-cccc
Q 037429 375 GF-----NNFASFTYHFD-GASYDIEGK-FVNL 400 (402)
Q Consensus 375 ~~-----~~~P~i~f~f~-G~~~~l~~~-yi~~ 400 (402)
.. ..+|+|+|+|+ |++|+||++ |+..
T Consensus 288 ~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~ 320 (381)
T 1t6e_X 288 LGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVD 320 (381)
T ss_dssp CCEETTEECCCCEEEEETTSCEEEECHHHHEEE
T ss_pred CcccccCCcCCeEEEEECCCcEEEeCCCeEEEE
Confidence 31 36899999998 599999999 8764
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.6e-44 Score=345.92 Aligned_cols=251 Identities=16% Similarity=0.210 Sum_probs=204.9
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.|| +|++.|+|||||+++||+|..|..|.|+.++.|||++|+ ++. ++
T Consensus 10 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-----------~~-------- 67 (325)
T 1ibq_A 10 QNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL-----------SG-------- 67 (325)
T ss_dssp CTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC-----------TT--------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc-----------CC--------
Confidence 45789999999999 899999999999999999999999999999999999998 553 23
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh---------h
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS---------I 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s---------~ 238 (402)
|.|++.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++ +
T Consensus 68 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~p~~~~~~ 139 (325)
T 1ibq_A 68 YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISS---EFVQDTANDGLLGLAFSSINTVQPKAQTTF 139 (325)
T ss_dssp CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHTSTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCc---cccccCCCceEEEeCcccccccCcCCCCCH
Confidence 999999999997789999999999986 899999999998765 33 2478999999998765 3
Q ss_pred hhhhhhhc-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccc
Q 037429 239 VMQLSDVV-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLA 316 (402)
Q Consensus 239 ~~ql~~~~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~ 316 (402)
.+||.+++ .++||+||.+ ...|.|+||+.|+.+ .+++.|+|+... ..+|.|+|++|+||++.+..
T Consensus 140 ~~~l~~~i~~~~FS~~l~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~~~~~~------ 206 (325)
T 1ibq_A 140 FDTVKSQLDSPLFAVQLKH-----DAPGVYDFGYIDDSKYTGSITYTDADSS--QGYWGFSTDGYSIGDGSSSS------ 206 (325)
T ss_dssp HHHHGGGSSSSEEEEEEET-----TEEEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEECEEEETTSCCBS------
T ss_pred HHHHHHhcCCcEEEEEecC-----CCCceEEECCcChhhccCceEEEEcCCC--CceEEEEECcEEECCeeccC------
Confidence 47777764 6899999986 347999999998765 577999999854 35999999999999986531
Q ss_pred cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEc
Q 037429 317 RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIE 394 (402)
Q Consensus 317 ~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~ 394 (402)
...++| ||| ++++||+++|++|.++|.+... .. ... -|..+|. ..+|+|+|+|+|++++||
T Consensus 207 ---~~~~ai--iDSGTt~~~lP~~~~~~i~~~i~~a~~----~~---~~g----~~~~~C~-~~~P~i~f~fgg~~~~i~ 269 (325)
T 1ibq_A 207 ---SGFSAI--ADTGTTLILLDDEIVSAYYEQVSGAQE----SY---EAG----GYVFSCS-TDLPDFTVVIGDYKAVVP 269 (325)
T ss_dssp ---CCEEEE--ECTTCCSEEECHHHHHHHHTTSTTCBC----CS---SSS----SCEEETT-CCCCCEEEEETTEEEEEC
T ss_pred ---CCceEE--EeCCCCcEeCCHHHHHHHHHhCCCceE----cC---cCC----eEEEEcC-CCCCcEEEEECCEEEEEC
Confidence 235689 999 9999999999998887632211 10 001 1223343 468999999999999999
Q ss_pred cc-cccc
Q 037429 395 GK-FVNL 400 (402)
Q Consensus 395 ~~-yi~~ 400 (402)
++ |+..
T Consensus 270 ~~~~~~~ 276 (325)
T 1ibq_A 270 GKYINYA 276 (325)
T ss_dssp HHHHEEE
T ss_pred HHHhccc
Confidence 99 7643
No 24
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.6e-43 Score=357.04 Aligned_cols=224 Identities=22% Similarity=0.289 Sum_probs=184.2
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC---CcccCCCCCcCCCCCCccccCCCCCcCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK---NCYRQQFPIYNSVASSTYRKLPCDHPLCQG 158 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~ 158 (402)
...|+. ++.+.+|+++|.||||||+|.|+|||||+++||+|..|. .|. .++.|||++|+||+..
T Consensus 42 ~~~~l~--n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~--------- 108 (478)
T 1qdm_A 42 DIVALK--NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKN--------- 108 (478)
T ss_dssp CSGGGC--CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCC---------
T ss_pred ceEEeE--eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeC---------
Confidence 356774 567899999999999999999999999999999999996 464 4678999999999873
Q ss_pred CCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh
Q 037429 159 DNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS 237 (402)
Q Consensus 159 ~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s 237 (402)
+ |.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++
T Consensus 109 --~--------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~--~f~~~~~dGIlGLg~~~~s 170 (478)
T 1qdm_A 109 --G--------KPAAIQYGTGS-IAGYFSEDSVTVGDL-----VVKDQEFIEATKEPGI--TFLVAKFDGILGLGFKEIS 170 (478)
T ss_dssp --C--------CEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCBS--HHHHCSSSEEEECSCGGGC
T ss_pred --C--------cEEEEEcCCCC-eEEEEEEEEEEECCe-----EECCEEEEEEEecCCc--ccccccccceecccccccc
Confidence 3 89999999998 469999999999986 8999999999987652 22 3567999999998876
Q ss_pred h------hhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCCC-CCeeeeeecCCCCCceeEEEEEEEEECCEE
Q 037429 238 I------VMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPLS-GTVQATTFVPPPGSFYYHLSLIDISVGTRR 307 (402)
Q Consensus 238 ~------~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~~-~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 307 (402)
. ..+|.++ + .++||+||.+.. +....|.|+||+.|+.+. +.+.|+|+... .||.|+|++|+||++.
T Consensus 171 ~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~-~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~---~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 171 VGKAVPVWYKMIEQGLVSDPVFSFWLNRHV-DEGEGGEIIFGGMDPKHYVGEHTYVPVTQK---GYWQFDMGDVLVGGKS 246 (478)
T ss_dssp GGGCCCHHHHHTTTTCCSSSEEEEECCCC------CEEEEETCCCTTSEEEEEEEEEEEEE---TTEEEEECCEEETTEE
T ss_pred cCCCCcHHHHHHHCCCCCCCEEEEEeecCC-CCCCCeEEEeCCcCHhhcCCCceEEeccCC---CeEEEEEeEEEECCEE
Confidence 4 3456666 3 589999998742 124589999999987764 67999999753 4999999999999988
Q ss_pred eeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHH
Q 037429 308 SRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQN 349 (402)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~ 349 (402)
+.+. .+..++| ||| ++++||+++|++|.++|.+
T Consensus 247 ~~~~-------~~~~~ai--iDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 247 TGFC-------AGGCAAI--ADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp CSTT-------TTCEEEE--ECSSCCSEEECHHHHHHHHHHHTC
T ss_pred Eeec-------CCCceEE--EcCCCCceeCCHHHHHHHHHHhCc
Confidence 7543 2245799 999 9999999999999998854
No 25
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-43 Score=343.64 Aligned_cols=250 Identities=16% Similarity=0.234 Sum_probs=203.5
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.|| ||++.|+|||||+++||+|..|..|.|+.++.|||++|+ ++. ++
T Consensus 11 ~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-----------~~-------- 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKI-----------DG-------- 68 (323)
T ss_dssp CGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEE-----------EE--------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-Ccc-----------CC--------
Confidence 45789999999999 799999999999999999999999999999999999998 653 22
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCChh---------
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDSI--------- 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s~--------- 238 (402)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++.
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~p~~~~~~ 140 (323)
T 1izd_A 69 ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSS---EFTQDTANDGLLGLAFSSINTVQPTPQKTF 140 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHHCTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccc---cccccCCCceEEecCcccccccCCCCCCCH
Confidence 899999999997789999999999986 899999999998766 33 25689999999986654
Q ss_pred hhhhhhhc-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccc
Q 037429 239 VMQLSDVV-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLA 316 (402)
Q Consensus 239 ~~ql~~~~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~ 316 (402)
.++|.+++ .++||+||.+ ...|.|+||+.|+.+ .+++.|+|+... +.+|.|+|++|+||+ .+. .
T Consensus 141 ~~~l~~~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-~~~--~---- 206 (323)
T 1izd_A 141 FDNVKSSLSEPIFAVALKH-----NAPGVYDFGYTDSSKYTGSITYTDVDNS--QGFWGFTADGYSIGS-DSS--S---- 206 (323)
T ss_dssp HHHHGGGSSSSEEEEECCT-----TSCEEEEESSCCTTSEEEEEEEEECBCT--TSSCEEEESEEEETT-EEE--C----
T ss_pred HHHHHHhccCcEEEEEccC-----CCCCEEEECCcCccccccceEEEECCCC--CceEEEEECeEEECC-ccc--C----
Confidence 46776663 6899999986 357999999998776 467999999754 359999999999999 442 1
Q ss_pred cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEc
Q 037429 317 RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIE 394 (402)
Q Consensus 317 ~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~ 394 (402)
...++| ||| ++++||+++|++|.++|..... .. .. ..|..+|. ..+|+|+|+|+|++++||
T Consensus 207 ---~~~~ai--iDSGTs~~~lp~~~~~~i~~~i~ga~~----~~---~~----g~~~~~C~-~~~P~i~f~fgg~~~~i~ 269 (323)
T 1izd_A 207 ---DSITGI--ADTGTTLLLLDDSIVDAYYEQVNGASY----DS---SQ----GGYVFPSS-ASLPDFSVTIGDYTATVP 269 (323)
T ss_dssp ---CCEEEE--ECTTCCSEEECHHHHHHHHTTSTTCEE----ET---TT----TEEEEETT-CCCCCEEEEETTEEEEEC
T ss_pred ---CCceEE--EeCCCcceeCCHHHHHHHHHhCCCcEE----cC---cC----CEEEEECC-CCCceEEEEECCEEEecC
Confidence 234689 999 9999999999998887732211 10 00 12333444 468999999999999999
Q ss_pred cc-cccc
Q 037429 395 GK-FVNL 400 (402)
Q Consensus 395 ~~-yi~~ 400 (402)
++ |+..
T Consensus 270 ~~~~~~~ 276 (323)
T 1izd_A 270 GEYISFA 276 (323)
T ss_dssp HHHHEEE
T ss_pred HHHeEEe
Confidence 99 7654
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=8.9e-44 Score=345.24 Aligned_cols=260 Identities=12% Similarity=0.140 Sum_probs=210.2
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC--CcccCCCCCcCCCCCCccccCCCCCcCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK--NCYRQQFPIYNSVASSTYRKLPCDHPLCQGD 159 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~ 159 (402)
...||. ++.+.+|+++|.|| ||++.|+|||||+++||+|..|. .|.++.++.|||++| ||+..
T Consensus 7 ~~~~l~--n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~---------- 71 (330)
T 1yg9_A 7 LYKLVH--VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISD---------- 71 (330)
T ss_dssp SCSCEE--EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEE----------
T ss_pred eEeeee--cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEEC----------
Confidence 456775 56788999999999 89999999999999999999997 575577889999999 99873
Q ss_pred CCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh-
Q 037429 160 NNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS- 237 (402)
Q Consensus 160 ~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s- 237 (402)
+ |.|++.|++|+. .|.+++|+|+|++. .++++.|||++.... .| ....+||||||++.++
T Consensus 72 -~--------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~---~f~~~~~~GilGLg~~~~s~ 133 (330)
T 1yg9_A 72 -G--------NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQ---EVCILSADVVVGIAAPGCPN 133 (330)
T ss_dssp -E--------EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECT---HHHHTTCSEEEECSCTTSCC
T ss_pred -C--------CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEccc---ccccccCceEEEcCcchhcc
Confidence 2 899999999987 69999999999986 899999999998733 33 3568999999998876
Q ss_pred ------hhhhhhhh--ccCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEe
Q 037429 238 ------IVMQLSDV--VDKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRS 308 (402)
Q Consensus 238 ------~~~ql~~~--~~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 308 (402)
++++|.++ +.++||+||.+.. +....|.|+||+.|+.+ .+++.|+|+.. +.+|.|+|++|+|+++.+
T Consensus 134 ~~~~~~~~~~l~~qg~i~~~FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 134 ALKGKTVLENFVEENLIAPVFSIHHARFQ-DGEHFGEIIFGGSDWKYVDGEFTYVPLVG---DDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp TTSCCCHHHHHHHTTSSCSEEEEEEEECT-TSCEEEEEEETSCCGGGEEEEEEEEEBSC---TTSCCEECSEEEETTEEE
T ss_pred ccCCCCHHHHHHhcCCCCceEEEEEcCCC-CCCCCCEEEECCcCHHHccCceEEEECCC---CCEEEEEeCeEEECCEEE
Confidence 66788776 6789999998752 11237999999998765 46799999984 359999999999999876
Q ss_pred eecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccc-cCCCC-CccccEEEE
Q 037429 309 RSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCY-TNPPG-FNNFASFTY 384 (402)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~-~~~~~-~~~~P~i~f 384 (402)
. . ...++| ||| ++++||+++|++|.+++.+... ..+. ..| ..+|. ...+|+|+|
T Consensus 210 ~-~--------~~~~ai--iDSGTs~~~lP~~~~~~l~~~~~~~~~------~~g~-----~~~~~~~C~~~~~~p~i~f 267 (330)
T 1yg9_A 210 A-P--------AGTQAI--IDTSKAIIVGPKAYVNPINEAIGCVVE------KTTT-----RRICKLDCSKIPSLPDVTF 267 (330)
T ss_dssp E-C--------TTCEEE--ECTTCSSEEEEHHHHHHHHHHHTCEEE------ECSS-----CEEEEECGGGGGGSCCEEE
T ss_pred c-C--------CCcEEE--EecCCccccCCHHHHHHHHHHhCCccc------CCCc-----eEEEEEECCCccccCcEEE
Confidence 4 1 145799 999 9999999999999998854321 1110 022 33343 157899999
Q ss_pred EEcCcEEEEccc-cccc
Q 037429 385 HFDGASYDIEGK-FVNL 400 (402)
Q Consensus 385 ~f~G~~~~l~~~-yi~~ 400 (402)
+|+|++++||++ |+..
T Consensus 268 ~fgg~~~~l~~~~y~~~ 284 (330)
T 1yg9_A 268 VINGRNFNISSQYYIQQ 284 (330)
T ss_dssp EETTEEEEECHHHHEEE
T ss_pred EECCEEEEECHHHhccc
Confidence 999999999999 8764
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.6e-43 Score=355.76 Aligned_cols=256 Identities=16% Similarity=0.205 Sum_probs=208.7
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
...||. ++.+.+|+++|.||||||++.|++||||+++||+|..|....|..++.|||++|+||+.. +
T Consensus 127 ~~~pL~--n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~-----------~ 193 (451)
T 3qvc_A 127 DNVELK--DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKD-----------D 193 (451)
T ss_dssp CCCCGG--GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE-----------E
T ss_pred Ccccee--ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccC-----------C
Confidence 456775 567899999999999999999999999999999999996555567889999999999873 2
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeC----CCCcccccCCccceeeecCCCCC-
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSND----NQNIQFASRGVISGILGLSSSPD- 236 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~----~~~~~~~~~~~~~GIlGLg~~~~- 236 (402)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||++. ..+ ......+||||||++.+
T Consensus 194 --------~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~~s 255 (451)
T 3qvc_A 194 --------TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKDLS 255 (451)
T ss_dssp --------EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBCSS
T ss_pred --------CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCccc
Confidence 89999999999 679999999999987 888 99999998 544 11246799999999764
Q ss_pred -----hhhhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEE
Q 037429 237 -----SIVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRR 307 (402)
Q Consensus 237 -----s~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 307 (402)
+++.+|.++ + .++||+||.+. ....|.|+|||.|..+ .+++.|+|+.. +.+|.|+++ |+||++
T Consensus 256 ~~~~~~~~~~L~~qg~I~~~~FS~~L~~~---~~~~G~l~fGgiD~s~y~G~l~~~pv~~---~~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 256 IGSIDPYIVELKTQNKIEQAVYSIYLPPE---NKNKGYLTIGGIEERFFDGPLNYEKLNH---DLMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SSCCCCHHHHHHHTTSSSSSEEEEECCTT---CTTEEEEEESSCCGGGEEEEEEEEECSS---TTSSEEEEE-EEETTE-
T ss_pred ccCCCCHHHHHHHcCCCCCCEEEEEEcCC---CCCCCEEEECCcchhhcCCceEEEEccc---CCeeEEEEE-EEECCc-
Confidence 466788877 4 58999999985 2458999999998876 46799999985 359999999 999998
Q ss_pred eeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEE
Q 037429 308 SRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYH 385 (402)
Q Consensus 308 ~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~ 385 (402)
.. ....+| ||| ++++||++++++|.+++.+... . ...+|..+|....+|+|+|+
T Consensus 328 ~~----------~~~~ai--iDSGTt~i~lP~~~~~~i~~~i~a~~~---------~---~~g~y~v~C~~~~~P~itf~ 383 (451)
T 3qvc_A 328 SS----------KKANVI--LDSATSVITVPTEFFNQFVESASVFKV---------P---FLSLYVTTCGNTKLPTLEYR 383 (451)
T ss_dssp EE----------EEEEEE--ECTTBSSEEECHHHHHHHHTTTTCEEC---------T---TSSCEEEETTCTTCCCEEEE
T ss_pred cC----------CCceEE--EeCCCccccCCHHHHHHHHHHcCCeec---------C---CCCeEEeeCCcCcCCcEEEE
Confidence 11 134688 999 9999999999999887744321 1 01234444432578999999
Q ss_pred EcCcEEEEccc-cccc
Q 037429 386 FDGASYDIEGK-FVNL 400 (402)
Q Consensus 386 f~G~~~~l~~~-yi~~ 400 (402)
|+|++++||++ |+..
T Consensus 384 fgg~~i~lp~~~yi~~ 399 (451)
T 3qvc_A 384 SPNKVYTLEPKQYLEP 399 (451)
T ss_dssp ETTEEEEECHHHHEEE
T ss_pred ECCEEEEEcHHHheee
Confidence 99999999999 8764
No 28
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.1e-43 Score=343.59 Aligned_cols=249 Identities=16% Similarity=0.212 Sum_probs=202.7
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+.+|+++|.|| ||++.|+|||||+++||+|.+|..|.|+.++.|||++|+ ++. .+
T Consensus 11 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~-----------~~-------- 68 (323)
T 1bxo_A 11 TANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KEL-----------SG-------- 68 (323)
T ss_dssp CGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEE-----------EE--------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-ccc-----------CC--------
Confidence 45789999999999 899999999999999999999999999999999999998 654 22
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh---------h
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS---------I 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s---------~ 238 (402)
|.|++.|++|+.+.|.+++|+|+|++. .++++.|||++...+ .+ ....+||||||++.++ +
T Consensus 69 ~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~---~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (323)
T 1bxo_A 69 YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISA---QFQQDTNNDGLLGLAFSSINTVQPQSQTTF 140 (323)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECH---HHHTCTTCSEEEECSCGGGCCCBSSCCCCH
T ss_pred CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCc---ccccCCCCceEEEeCcccccccccCCCCCH
Confidence 999999999997789999999999986 899999999998765 33 2468999999997654 3
Q ss_pred hhhhhhhc-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccc
Q 037429 239 VMQLSDVV-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLA 316 (402)
Q Consensus 239 ~~ql~~~~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~ 316 (402)
.++|.+++ .++||+||.+ ...|.|+||+.|+.+ .+++.|+|+... +.+|.|+|++|+||+ ...
T Consensus 141 ~~~l~~~i~~~~FS~~L~~-----~~~G~l~fGg~d~~~~~g~l~~~p~~~~--~~~w~v~l~~i~v~~-~~~------- 205 (323)
T 1bxo_A 141 FDTVKSSLAQPLFAVALKH-----QQPGVYDFGFIDSSKYTGSLTYTGVDNS--QGFWSFNVDSYTAGS-QSG------- 205 (323)
T ss_dssp HHHHGGGBSSSEEEEECCS-----SSCEEEEESSCCGGGBSSCCEEEECBCT--TSSCEEEEEEEEETT-EEE-------
T ss_pred HHHHHHhcCCcEEEEEEeC-----CCCceEEEeCcChhhccCceEEEECCCC--CCeEEEEEeeEEECC-ccC-------
Confidence 46676664 5899999986 357999999998765 577999999754 359999999999999 211
Q ss_pred cccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEc
Q 037429 317 RSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIE 394 (402)
Q Consensus 317 ~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~ 394 (402)
...++| ||| ++++||+++|++|.++|..... . ... .-|..+|. ..+|+|+|+|+|++++||
T Consensus 206 ---~~~~ai--iDSGTs~~~lP~~~~~~l~~~i~~a~~----~----~~~---g~~~~~C~-~~~P~i~f~fgg~~~~l~ 268 (323)
T 1bxo_A 206 ---DGFSGI--ADTGTTLLLLDDSVVSQYYSQVSGAQQ----D----SNA---GGYVFDCS-TNLPDFSVSISGYTATVP 268 (323)
T ss_dssp ---EEEEEE--ECTTCSSEEECHHHHHHHHTTSTTCEE----E----TTT---TEEEECTT-CCCCCEEEEETTEEEEEC
T ss_pred ---CCceEE--EeCCCCceeCCHHHHHHHHHhCCCceE----c----CcC---CEEEEECC-CCCceEEEEECCEEEEEC
Confidence 134689 999 9999999999999887732211 1 000 12334444 468999999999999999
Q ss_pred cc-cccc
Q 037429 395 GK-FVNL 400 (402)
Q Consensus 395 ~~-yi~~ 400 (402)
++ |+..
T Consensus 269 ~~~~~~~ 275 (323)
T 1bxo_A 269 GSLINYG 275 (323)
T ss_dssp HHHHEEE
T ss_pred HHHeEEe
Confidence 99 7653
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=343.88 Aligned_cols=268 Identities=18% Similarity=0.233 Sum_probs=206.4
Q ss_pred ccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCC
Q 037429 90 LREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQ 169 (402)
Q Consensus 90 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~ 169 (402)
...+..|+++|+||||||++.|+|||||+++||+|.+|..| ++.|||++|+||+...
T Consensus 9 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~------------------- 65 (383)
T 2ewy_A 9 GDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG------------------- 65 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE-------------------
T ss_pred CCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC-------------------
Confidence 34567899999999999999999999999999999988766 5679999999999843
Q ss_pred CceEEeeCCCCeEeEEEEEEEEEEecCCCCceee-ccEEEEeeeCCCCccccc--CCccceeeecCCCCChh--------
Q 037429 170 CVYSVGYGGGGTTKGVASFESFRFATDSSSATTV-DNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDSI-------- 238 (402)
Q Consensus 170 ~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~-~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s~-------- 238 (402)
|.|++.|++|+. .|.+++|+|+|++.. .+ ..+.|||..+..+ .| ....+||||||++.++.
T Consensus 66 ~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 66 FDVTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESEN---FFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEES---CSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred ceEEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecc---eeeccCcCceEEecCchhcccccccccCH
Confidence 899999999986 599999999998641 11 1367888776555 33 24679999999987653
Q ss_pred hhhhhhh--ccCceEEeeccC----CCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeec
Q 037429 239 VMQLSDV--VDKRFSYCLVPF----TDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSV 311 (402)
Q Consensus 239 ~~ql~~~--~~~~FS~~l~~~----~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~ 311 (402)
..+|.+| +.++||+||.+. .+.....|.|+||+.|..+ .+.+.|+|+... .+|.|.|++|+||++.+.++
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~ 214 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE---WYYQIEILKLEIGGQSLNLD 214 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB---TTBBCCEEEEEETTEECCCC
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC---ceEEEEEEEEEECCEEcccc
Confidence 3467766 568999999642 1123468999999998765 577999999874 48999999999999988765
Q ss_pred ccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCC--CCCCCccccCCCC-CccccEEEEEE
Q 037429 312 TTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRV--PEGLQLCYTNPPG-FNNFASFTYHF 386 (402)
Q Consensus 312 ~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~f~f 386 (402)
...+ ...++| ||| ++++||+++|++|.++|.+... .++.... ......|+..... ...+|+|+|+|
T Consensus 215 ~~~~----~~~~ai--iDSGTt~~~lP~~~~~~l~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 285 (383)
T 2ewy_A 215 CREY----NADKAI--VDSGTTLLRLPQKVFDAVVEAVARASL---IPEFSDGFWTGSQLACWTNSETPWSYFPKISIYL 285 (383)
T ss_dssp TTTT----TSSCEE--ECTTCSSEEEEHHHHHHHHHHHHHTTC---SSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEE
T ss_pred cccc----CCccEE--EEcCCccccCCHHHHHHHHHHHhhhcc---cccCccccccccccccccCCcccHhhCCcEEEEE
Confidence 4433 135799 999 9999999999999999988654 1111100 0113479876433 24689999999
Q ss_pred cCc------EEEEccc-cccc
Q 037429 387 DGA------SYDIEGK-FVNL 400 (402)
Q Consensus 387 ~G~------~~~l~~~-yi~~ 400 (402)
+|. +++||++ ||..
T Consensus 286 ~g~~~~~~~~~~l~~~~yi~~ 306 (383)
T 2ewy_A 286 RDENSSRSFRITILPQLYIQP 306 (383)
T ss_dssp ECSSTTEEEEEEECHHHHEEE
T ss_pred CCCCCCceEEEEEChHHheee
Confidence 974 7999999 8864
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=5.7e-42 Score=340.51 Aligned_cols=266 Identities=18% Similarity=0.246 Sum_probs=207.1
Q ss_pred cCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCCC
Q 037429 91 REGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQC 170 (402)
Q Consensus 91 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~~ 170 (402)
..+.+|+++|.||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+... |
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~-------------------~ 74 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR-------------------K 74 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE-------------------E
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC-------------------c
Confidence 3467899999999999999999999999999999988655 5789999999999843 8
Q ss_pred ceEEeeCCCCeEeEEEEEEEEEEec-CCCCceeec-cEEEEeeeCCCCccccc--CCccceeeecCCCCCh--------h
Q 037429 171 VYSVGYGGGGTTKGVASFESFRFAT-DSSSATTVD-NIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS--------I 238 (402)
Q Consensus 171 ~~~~~Y~dGs~~~G~~~~D~v~~~~-~~~~~~~~~-~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s--------~ 238 (402)
.|++.|++|+. +|.+++|+|+|++ . .++ .+.|||+.+..+ .| ....+||||||++.++ +
T Consensus 75 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~---~f~~~~~~dGIlGLg~~~~s~~~~~~~~~ 145 (395)
T 2qp8_A 75 GVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDK---FFINGSNWEGILGLAYAEIARPDDSLEPF 145 (395)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEES---CSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred eEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCc---ccccccCccceEEcCchhhccCCCCCCCH
Confidence 99999999997 5999999999984 3 222 367888776554 33 2468999999998764 3
Q ss_pred hhhhhhh--ccCceEEeeccCCC-------CCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEe
Q 037429 239 VMQLSDV--VDKRFSYCLVPFTD-------ALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRS 308 (402)
Q Consensus 239 ~~ql~~~--~~~~FS~~l~~~~~-------~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 308 (402)
+.+|.+| +.++||+||.+..- .....|.|+||+.|..+ .+.+.|+|+... .+|.|.|++|+||++.+
T Consensus 146 ~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~ 222 (395)
T 2qp8_A 146 FDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDL 222 (395)
T ss_dssp HHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEETTEEC
T ss_pred HHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC---ceEEEEEEEEEECCEEc
Confidence 4578777 56899999975310 01368999999998765 467999999863 49999999999999988
Q ss_pred eecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCC--CCCCCccccCCCC-CccccEEE
Q 037429 309 RSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRV--PEGLQLCYTNPPG-FNNFASFT 383 (402)
Q Consensus 309 ~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~ 383 (402)
.++...+ ...++| ||| ++++||+++|++|.++|.+.... ...... ......|+..... ...+|+|+
T Consensus 223 ~~~~~~~----~~~~ai--iDSGTt~~~lP~~~~~~l~~~i~~~~~~---~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 293 (395)
T 2qp8_A 223 KMDCKEY----NYDKSI--VDSGTTNLRLPKKVFEAAVKSIKAASST---EKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 293 (395)
T ss_dssp CCCGGGG----GSSCEE--ECTTCCSEEEEHHHHHHHHHHHHHHTTT---SCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ccCcccc----CCceEE--EEcCCCcEecCHHHHHHHHHHHhhhccc---ccCCccccccccccccccccchHhhCCcEE
Confidence 7654443 135799 999 99999999999999999887541 111000 0113479876533 23699999
Q ss_pred EEEcCc------EEEEccc-cccc
Q 037429 384 YHFDGA------SYDIEGK-FVNL 400 (402)
Q Consensus 384 f~f~G~------~~~l~~~-yi~~ 400 (402)
|+|+|. +|+|+++ ||..
T Consensus 294 f~f~g~~~~~~~~~~l~p~~yi~~ 317 (395)
T 2qp8_A 294 LYLMGEVTNQSFRITILPQQYLRP 317 (395)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEE
T ss_pred EEEccCCCCceEEEEECHHHhEee
Confidence 999974 6999999 8764
No 31
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-42 Score=321.52 Aligned_cols=223 Identities=22% Similarity=0.335 Sum_probs=185.3
Q ss_pred eeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC---CcccCCCCCcCCCCCCccccCCCCCcCCCCC
Q 037429 83 ERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK---NCYRQQFPIYNSVASSTYRKLPCDHPLCQGD 159 (402)
Q Consensus 83 ~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~ 159 (402)
.+||. ++.+.+|+++|.||||||++.|+|||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~--n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~--------- 70 (239)
T 1b5f_A 4 VVALT--NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG--------- 70 (239)
T ss_dssp EEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE---------
T ss_pred eeeee--ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC---------
Confidence 56775 678899999999999999999999999999999999997 454 46789999999998742
Q ss_pred CCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc-CCccceeeecCCCCChh
Q 037429 160 NNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDSI 238 (402)
Q Consensus 160 ~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s~ 238 (402)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+. .| ....+||||||++.++.
T Consensus 71 ----------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~--~f~~~~~~GilGLg~~~~s~ 132 (239)
T 1b5f_A 71 ----------TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADN--VFLHRLFDGILGLSFQTISV 132 (239)
T ss_dssp ----------EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHH--HHTTCSCCEEEECSCCSSSC
T ss_pred ----------cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCc--cccccCcceEEecCcccccc
Confidence 889999999985 59999999999986 8999999999976542 12 35689999999998873
Q ss_pred --hhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecc
Q 037429 239 --VMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVT 312 (402)
Q Consensus 239 --~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 312 (402)
..+|.++ + .++||+||.+.. +....|.|+||+.|+.+ .+++.|+|+... .+|.|+|++|+|+++.+.+..
T Consensus 133 p~~~~l~~qg~i~~~~FS~~l~~~~-~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~ 208 (239)
T 1b5f_A 133 PVWYNMLNQGLVKERRFSFWLNRNV-DEEEGGELVFGGLDPNHFRGDHTYVPVTYQ---YYWQFGIGDVLIGDKSTGFCA 208 (239)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCSC-SSSCCEEEEETSCCGGGEEEEEEEEEEEEE---TTEEEEECCEEETTEECCTTT
T ss_pred HHHHHHHHCCCCCCCEEEEEEeCCC-CCCCCeEEEECCcChhhccCceEEEEcccC---CeEEEEeeEEEECCEEecccC
Confidence 3566665 3 589999998752 12468999999998765 467999999863 499999999999999876432
Q ss_pred cccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHH
Q 037429 313 TTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQN 349 (402)
Q Consensus 313 ~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~ 349 (402)
...++| ||| ++++||+++|++|.++|.+
T Consensus 209 -------~~~~ai--iDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 -------PGCQAF--ADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp -------TCEEEE--ECTTCSSEEECHHHHHHHHHHTTC
T ss_pred -------CCCEEE--EecCcchhhCCHHHHHHHHHHhCC
Confidence 245789 999 9999999999999988743
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.6e-42 Score=335.33 Aligned_cols=249 Identities=19% Similarity=0.292 Sum_probs=199.3
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNN 161 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~ 161 (402)
..+||. ..+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 3 ~~~~l~---n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~------------- 56 (340)
T 1wkr_A 3 GSVPAT---NQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS------------- 56 (340)
T ss_dssp EEEEEE---ECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE-------------
T ss_pred ccEeee---ccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC-------------
Confidence 456774 34679999999999999999999999999999874 3699999887655
Q ss_pred CCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCcccccCCccceeeecCCCCChh---
Q 037429 162 LYKCVDQQCVYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFASRGVISGILGLSSSPDSI--- 238 (402)
Q Consensus 162 ~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~GIlGLg~~~~s~--- 238 (402)
|.|.+.|++|+ ++|.+++|+|+|++. .++++.|||++...+ | ...+||||||++.+++
T Consensus 57 --------~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~----~-~~~~GilGLg~~~~s~~~~ 117 (340)
T 1wkr_A 57 --------DKVSVTYGSGS-FSGTEYTDTVTLGSL-----TIPKQSIGVASRDSG----F-DGVDGILGVGPVDLTVGTL 117 (340)
T ss_dssp --------EEEEEECSSCE-EEEEEEEEEEEETTE-----EEEEEEEEEEEEEES----C-TTCSEEEECSCGGGGTTSE
T ss_pred --------ceEEEEECCcE-EEEEEEEEEEEECCE-----EEcceEEEEEEccCC----C-cCCCcEEECCccccccccc
Confidence 99999999998 569999999999986 899999999998665 2 3689999999987654
Q ss_pred -----------hhhhhhh--c-cCceEEeeccCCCCCCCCceEEECCCCCCC-CCCeeeeeecCCCC-CceeEEEEEEEE
Q 037429 239 -----------VMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFGNDIPPL-SGTVQATTFVPPPG-SFYYHLSLIDIS 302 (402)
Q Consensus 239 -----------~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~-~~~y~v~l~~i~ 302 (402)
+.+|.++ + .++||+||.+........|.|+||+.|+.+ .+++.|+|+...+. ..||.|. ++|+
T Consensus 118 ~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~ 196 (340)
T 1wkr_A 118 SPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIR 196 (340)
T ss_dssp ESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEE
T ss_pred cccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEE
Confidence 4566665 3 589999998742223457999999998765 47799999988643 5699999 9999
Q ss_pred ECC-EEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCCCCCCccccCCCC-Ccc
Q 037429 303 VGT-RRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVPEGLQLCYTNPPG-FNN 378 (402)
Q Consensus 303 vg~-~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~ 378 (402)
|++ +.+.. .+++| ||| ++++||+++|++|.+++.+... .. ..+|..+|. ...
T Consensus 197 v~~~~~l~~----------~~~ai--iDSGTt~~~lP~~~~~~l~~~~~a~~~---------~~---~g~~~~~C~~~~~ 252 (340)
T 1wkr_A 197 YGSSTSILS----------STAGI--VDTGTTLTLIASDAFAKYKKATGAVAD---------NN---TGLLRLTTAQYAN 252 (340)
T ss_dssp ETTTEEEEE----------EEEEE--ECTTBCSEEECHHHHHHHHHHHTCEEC---------TT---TSSEEECHHHHHT
T ss_pred ECCCeEccC----------CCeEE--EeCCcccccCCHHHHHHHHHhhCCEEc---------CC---CCeEEeecccccc
Confidence 998 77642 23689 999 9999999999999887754332 00 113444443 146
Q ss_pred ccEEEEEEcCcEEEEccc-cccc
Q 037429 379 FASFTYHFDGASYDIEGK-FVNL 400 (402)
Q Consensus 379 ~P~i~f~f~G~~~~l~~~-yi~~ 400 (402)
+|+|+|+|+|++++|+++ ||..
T Consensus 253 ~p~i~f~f~g~~~~i~~~~yi~~ 275 (340)
T 1wkr_A 253 LQSLFFTIGGQTFELTANAQIWP 275 (340)
T ss_dssp CCCEEEEETTEEEEECTGGGBCC
T ss_pred CCcEEEEECCEEEEEcHHHhccc
Confidence 899999999999999999 8754
No 33
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-41 Score=343.50 Aligned_cols=268 Identities=19% Similarity=0.244 Sum_probs=209.7
Q ss_pred cCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCCC
Q 037429 91 REGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQC 170 (402)
Q Consensus 91 ~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~~ 170 (402)
..+.+|+++|.||||||++.|+|||||+++||+|.+| | +.++.|||++|+||+... |
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~-------------------~ 127 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-------------------K 127 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-------------------E
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC-------------------c
Confidence 3556899999999999999999999999999999987 4 457889999999999843 8
Q ss_pred ceEEeeCCCCeEeEEEEEEEEEEecCCCCceeeccEEEEeeeCCCCccccc--CCccceeeecCCCCCh--------hhh
Q 037429 171 VYSVGYGGGGTTKGVASFESFRFATDSSSATTVDNIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS--------IVM 240 (402)
Q Consensus 171 ~~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s--------~~~ 240 (402)
.|.+.|++|+. .|.+++|+|+|++... +.+ .+.|+|+....+ .| ....+||||||++.++ ++.
T Consensus 128 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~--~~~-~~~~~~~~~~~~---~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 200 (455)
T 3lpj_A 128 GVYVPYTQGKW-EGELGTDLVSIPHGPN--VTV-RANIAAITESDK---FFINGSNWEGILGLAYAEIARPDDSLEPFFD 200 (455)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSCS--CEE-EEEEEEEEEEES---CSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred cEEEEeCCeEE-EEEEEEEEEEECCCcc--eee-EEEEEEEEccCc---ccccCCCcceEEEeCccccccccCCCCcHHH
Confidence 99999999997 6999999999985311 122 367898887665 44 2568999999997654 456
Q ss_pred hhhhh--ccCceEEeeccCCC-------CCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeee
Q 037429 241 QLSDV--VDKRFSYCLVPFTD-------ALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRS 310 (402)
Q Consensus 241 ql~~~--~~~~FS~~l~~~~~-------~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~ 310 (402)
+|.++ +.++||+||.+... .....|.|+||++|..+ .+.+.|+|+... .+|.|++++|+||++.+.+
T Consensus 201 ~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~ 277 (455)
T 3lpj_A 201 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKM 277 (455)
T ss_dssp HHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEETTEECCC
T ss_pred HHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC---ceeEEEEeEEEECCEEccc
Confidence 78777 55899999975310 02458999999998776 467999999863 5999999999999998876
Q ss_pred cccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCC--CCCCCccccCCCC-CccccEEEEE
Q 037429 311 VTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRV--PEGLQLCYTNPPG-FNNFASFTYH 385 (402)
Q Consensus 311 ~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~--~~~~~~C~~~~~~-~~~~P~i~f~ 385 (402)
+...+ +...+| ||| ++++||+++|++|.++|.+... ..+..+. ......|+..... ...+|+|+|+
T Consensus 278 ~~~~~----~~~~ai--iDSGTt~~~lP~~~~~~i~~~i~~~~~---~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~ 348 (455)
T 3lpj_A 278 DCKEY----NYDKSI--VDSGTTNLRLPKKVFEAAVKSIKAASS---TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLY 348 (455)
T ss_dssp CGGGG----GSSCEE--ECTTSSSEEEEHHHHHHHHHHHHHHTT---TSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEE
T ss_pred ccccc----CCCeEE--EECCCcceeCCHHHHHHHHHHhhhhcc---ccccCcccccCcceecccccCCchhcCCcEEEE
Confidence 54433 245799 999 9999999999999999998764 1111110 1124579987532 2358999999
Q ss_pred EcCc------EEEEccc-cccc
Q 037429 386 FDGA------SYDIEGK-FVNL 400 (402)
Q Consensus 386 f~G~------~~~l~~~-yi~~ 400 (402)
|+|. +|+||++ ||..
T Consensus 349 f~g~~~~~~~~~~l~~~~yi~~ 370 (455)
T 3lpj_A 349 LMGEVTNQSFRITILPQQYLRP 370 (455)
T ss_dssp EECSSTTEEEEEEECHHHHEEE
T ss_pred EcCCCcCceEEEEECHHHheEe
Confidence 9986 4999999 8764
No 34
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.6e-41 Score=336.55 Aligned_cols=266 Identities=18% Similarity=0.237 Sum_probs=205.4
Q ss_pred CCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCCCcccCCCCCcCCCCCCccccCCCCCcCCCCCCCCCCCCCCCCc
Q 037429 92 EGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCKNCYRQQFPIYNSVASSTYRKLPCDHPLCQGDNNLYKCVDQQCV 171 (402)
Q Consensus 92 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~f~p~~SsT~~~v~C~s~~C~~~~~~~~C~~~~~~ 171 (402)
.+.+|+++|.||||||++.|+|||||+++||+|.+| | +.++.|||++|+||+... |.
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~-------------------~~ 82 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-------------------KG 82 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-------------------EE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC-------------------CE
Confidence 456899999999999999999999999999999987 3 457789999999999842 89
Q ss_pred eEEeeCCCCeEeEEEEEEEEEEecCCCCceeec-cEEEEeeeCCCCccccc--CCccceeeecCCCCCh--------hhh
Q 037429 172 YSVGYGGGGTTKGVASFESFRFATDSSSATTVD-NIIFGCSNDNQNIQFAS--RGVISGILGLSSSPDS--------IVM 240 (402)
Q Consensus 172 ~~~~Y~dGs~~~G~~~~D~v~~~~~~~~~~~~~-~~~fG~~~~~~~~~~~~--~~~~~GIlGLg~~~~s--------~~~ 240 (402)
|.+.|++|+. .|.+++|+|+|++.. .++ .+.|+|+....+ .| ....+||||||++.++ ++.
T Consensus 83 ~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~---~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 154 (402)
T 3vf3_A 83 VYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDK---FFINGSNWEGILGLAYAEIARPDDSLEPFFD 154 (402)
T ss_dssp EEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEES---CSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred EEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEcccc---ccccCCCccceEEcCchhhcccCCcCCcHHH
Confidence 9999999997 699999999998531 222 345788776655 33 2568999999997654 456
Q ss_pred hhhhh--ccCceEEeeccCCC-------CCCCCceEEECCCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeee
Q 037429 241 QLSDV--VDKRFSYCLVPFTD-------ALMAPSIVKFGNDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRS 310 (402)
Q Consensus 241 ql~~~--~~~~FS~~l~~~~~-------~~~~~G~l~fG~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~ 310 (402)
+|.++ +.++||+||.+... .....|.|+||++|..+ .+.+.|+|+... .+|.|++++|+|+++.+.+
T Consensus 155 ~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~ 231 (402)
T 3vf3_A 155 SLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKM 231 (402)
T ss_dssp HHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB---TTBEECEEEEEETTEECCC
T ss_pred HHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC---cEEEEEEeEEEECCEEecc
Confidence 78877 55899999975310 03458999999998776 467999999863 5899999999999998876
Q ss_pred cccccccccCCCCeeeeecC--CcccchHHHHHHHHHHHHHHhhhccccccCCCC--CCCCccccCCCC-CccccEEEEE
Q 037429 311 VTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAFQNYYDALKLERIGRVP--EGLQLCYTNPPG-FNNFASFTYH 385 (402)
Q Consensus 311 ~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~--~~~~~C~~~~~~-~~~~P~i~f~ 385 (402)
+...+ +...+| ||| ++++||+++|++|.++|.+... ..+..+.. .....|+..... ...+|+|+|+
T Consensus 232 ~~~~~----~~~~ai--iDSGTt~~~lP~~~~~~i~~~i~~~~~---~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 302 (402)
T 3vf3_A 232 DCKEY----NYDKSI--VDSGTTNLRLPKKVFEAAVKSIKAASS---TEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLY 302 (402)
T ss_dssp CGGGG----GSSCEE--ECTTCCSEEEEHHHHHHHHHHHHHHTT---TSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEE
T ss_pred ccccc----CCCeEE--EECCCCcccCCHHHHHHHHHHHhhhcc---ccccCccccccccccccccccchHhhCCceEEE
Confidence 54433 245799 999 9999999999999999998754 21111111 124579876432 2369999999
Q ss_pred EcCc------EEEEccc-cccc
Q 037429 386 FDGA------SYDIEGK-FVNL 400 (402)
Q Consensus 386 f~G~------~~~l~~~-yi~~ 400 (402)
|+|. +++||++ ||..
T Consensus 303 f~g~~~~~~~~~~l~~~~yi~~ 324 (402)
T 3vf3_A 303 LMGEVTNQSFRITILPQQYLRP 324 (402)
T ss_dssp EECSSTTEEEEEEECHHHHEEE
T ss_pred EecCCCCceEEEEECHHHheeh
Confidence 9975 4999999 8764
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.91 E-value=1.1e-24 Score=172.28 Aligned_cols=90 Identities=29% Similarity=0.514 Sum_probs=79.9
Q ss_pred ceeeeeeeccCCeEEEEEEEeCCCCcEEEEEEECCCCceEEeCCCCC----CcccCCCCCcCCCCCCccccCCCCCcCCC
Q 037429 82 AERIVFTLLREGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQPCK----NCYRQQFPIYNSVASSTYRKLPCDHPLCQ 157 (402)
Q Consensus 82 ~~~p~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~f~p~~SsT~~~v~C~s~~C~ 157 (402)
...||. +..+.+|+++|.||||||+|.|+|||||+++||+|..|. .|. .++.|||++|+||+...
T Consensus 3 ~~~~l~--n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 3 IPEVLK--NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEEE--EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE-------
T ss_pred ceEeeE--ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC-------
Confidence 346775 578899999999999999999999999999999999997 464 47889999999999842
Q ss_pred CCCCCCCCCCCCCceEEeeCCCCeEeEEEEEEEEEEec
Q 037429 158 GDNNLYKCVDQQCVYSVGYGGGGTTKGVASFESFRFAT 195 (402)
Q Consensus 158 ~~~~~~~C~~~~~~~~~~Y~dGs~~~G~~~~D~v~~~~ 195 (402)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 89999999999 56999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.89 E-value=2.8e-23 Score=192.09 Aligned_cols=172 Identities=17% Similarity=0.239 Sum_probs=131.7
Q ss_pred eeeccEEEEeeeCCCCccccc-CCccceeeecCCCCCh------hhhhhhhh--c-cCceEEeeccCCCCCCCCceEEEC
Q 037429 201 TTVDNIIFGCSNDNQNIQFAS-RGVISGILGLSSSPDS------IVMQLSDV--V-DKRFSYCLVPFTDALMAPSIVKFG 270 (402)
Q Consensus 201 ~~~~~~~fG~~~~~~~~~~~~-~~~~~GIlGLg~~~~s------~~~ql~~~--~-~~~FS~~l~~~~~~~~~~G~l~fG 270 (402)
++++++.|||++...+. .| ....+||||||++.++ ++++|.++ + .++||+||.+... ....|.|+||
T Consensus 3 ~~v~~~~Fg~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~~G~l~fG 79 (241)
T 1lya_B 3 VKVERQVFGEATKQPGI--TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPD-AQPGGELMLG 79 (241)
T ss_dssp EEEEEEEEEEEEECCSS--TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTT-CSSCEEEEET
T ss_pred eEECCeEEEEEEEccCC--ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCC-CCCCcEEEEC
Confidence 37899999999988762 23 3578999999998765 45678776 3 6899999988531 1238999999
Q ss_pred CCCCCC-CCCeeeeeecCCCCCceeEEEEEEEEECCEEeeecccccccccCCCCeeeeecC--CcccchHHHHHHHHHHH
Q 037429 271 NDIPPL-SGTVQATTFVPPPGSFYYHLSLIDISVGTRRSRSVTTTLARSRTVTNDLPGYDS--DQTTVGRNAYRAVMGAF 347 (402)
Q Consensus 271 ~~~~~~-~~~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~~~~~i~~iDS--t~~~lp~~~y~~l~~~i 347 (402)
+.|+.+ .+++.|+|+.. ..+|.|+|++|+|+++.+.. .....+| ||| +++++|+++|++|.+++
T Consensus 80 g~d~~~~~g~l~~~p~~~---~~~~~v~l~~i~v~~~~~~~--------~~~~~ai--iDSGTt~~~lP~~~~~~l~~~~ 146 (241)
T 1lya_B 80 GTDSKYYKGSLSYLNVTR---KAYWQVHLDQVEVASGLTLC--------KEGCEAI--VDTGTSLMVGPVDEVRELQKAI 146 (241)
T ss_dssp SCCGGGEEEEEEEEECSS---BTTBEEEEEEEEETTSCEES--------TTCEEEE--ECTTCSSEEECHHHHHHHHHHH
T ss_pred CcCHHHcCCceEEEECcc---ccEEEEEEeEEEECCeeEec--------cCCCEEE--EECCCccccCCHHHHHHHHHHh
Confidence 998765 46799999986 35999999999999976421 1245688 999 99999999999999888
Q ss_pred HHHhhhccccccCCCCCCCCccccCCCCCccccEEEEEEcCcEEEEccc-cccc
Q 037429 348 QNYYDALKLERIGRVPEGLQLCYTNPPGFNNFASFTYHFDGASYDIEGK-FVNL 400 (402)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~f~f~G~~~~l~~~-yi~~ 400 (402)
.+... . .......|+.. ..+|+|+|+|+|++++||++ |+..
T Consensus 147 ~~~~~------~--~g~~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~y~~~ 188 (241)
T 1lya_B 147 GAVPL------I--QGEYMIPCEKV----STLPAITLKLGGKGYKLSPEDYTLK 188 (241)
T ss_dssp TCEEE------E--TTEEEEEGGGG----GGSCCEEEEETTEEEEECTTTSEEE
T ss_pred CCeec------c--CCcEEEECCCC----ccCCeEEEEECCEEEEECHHHhEEE
Confidence 54321 0 01112346654 57899999999999999999 8764
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=95.23 E-value=0.0056 Score=46.16 Aligned_cols=24 Identities=4% Similarity=0.404 Sum_probs=21.8
Q ss_pred ccccEEEEEEcCcEEEEccc-cccc
Q 037429 377 NNFASFTYHFDGASYDIEGK-FVNL 400 (402)
Q Consensus 377 ~~~P~i~f~f~G~~~~l~~~-yi~~ 400 (402)
.++|+|+|+|+|++++|+++ ||..
T Consensus 11 ~~~P~i~f~~gg~~~~l~~~~yi~~ 35 (87)
T 1b5f_B 11 SSMPNVSFTIGGKKFGLTPEQYILK 35 (87)
T ss_dssp GGCCCEEEEETTEEEEECHHHHEEE
T ss_pred CcCCcEEEEECCEEEEECHHHhEEE
Confidence 57899999999999999999 8865
No 38
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=78.59 E-value=1.8 Score=33.88 Aligned_cols=31 Identities=19% Similarity=0.332 Sum_probs=25.2
Q ss_pred EEEEEeC---CCCcEEEEEEECCCCceEEeCCCC
Q 037429 97 IVQVGIG---SPPLNVFLLMDTGGGLIWTQCQPC 127 (402)
Q Consensus 97 ~~~i~vG---tP~q~~~v~~DTGS~~~Wv~~~~C 127 (402)
.++|.|| +|+|.+..++|||-+++-+.-..+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 3566666 789999999999999999986543
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.57 E-value=2.1 Score=33.10 Aligned_cols=25 Identities=24% Similarity=0.171 Sum_probs=22.4
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEe
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQ 123 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~ 123 (402)
++.|.|| +|.+.+++|||.+++-+.
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 5779999 499999999999999987
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=78.27 E-value=2.7 Score=32.14 Aligned_cols=27 Identities=26% Similarity=0.245 Sum_probs=23.2
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeCC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~ 125 (402)
+++|.||- |.+.+++|||.+++-+.-.
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 46799994 9999999999999998644
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.34 E-value=3.5 Score=31.54 Aligned_cols=27 Identities=26% Similarity=0.156 Sum_probs=23.0
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeCC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~ 125 (402)
++.|.|| +|.+.+++|||.+++-+.-.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 4678998 49999999999999988643
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=69.08 E-value=4 Score=33.23 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=26.4
Q ss_pred CCeEEEEEEEeCCCCcEEEEEEECCCCceEEeC
Q 037429 92 EGFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQC 124 (402)
Q Consensus 92 ~~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~ 124 (402)
..+.+++++.|+ ++++.+++|||++.+-+.-
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 457789999998 4899999999999888753
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=64.65 E-value=6.2 Score=31.07 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=20.9
Q ss_pred EEeCCCCcEEEEEEECCCCceEEeC
Q 037429 100 VGIGSPPLNVFLLMDTGGGLIWTQC 124 (402)
Q Consensus 100 i~vGtP~q~~~v~~DTGS~~~Wv~~ 124 (402)
|.|| .|.+.+++|||.+++-+.-
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEC--CEEEEEEecCCCCcEEEcc
Confidence 9999 5999999999999998874
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.90 E-value=7.8 Score=30.35 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=23.6
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeCCC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQCQP 126 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~~ 126 (402)
.+.|.|| +|.+..++|||-+++-+.-..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 3678898 499999999999999997543
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=60.78 E-value=7.1 Score=32.09 Aligned_cols=31 Identities=6% Similarity=0.067 Sum_probs=26.2
Q ss_pred CeEEEEEEEeCCCCcEEEEEEECCCCceEEeCC
Q 037429 93 GFYYIVQVGIGSPPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 93 ~~~Y~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~ 125 (402)
...|++++.|. .+++.+++|||++.+-+.-.
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45788999997 49999999999999988643
No 46
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=47.43 E-value=22 Score=28.54 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=22.7
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeCC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~~ 125 (402)
++.+.|+- |.+..++|||.+++-+.-.
T Consensus 24 ~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred EEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 46788884 9999999999999988654
No 47
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=44.73 E-value=18 Score=28.79 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=17.7
Q ss_pred CcEEEEEEECCCCceEEeCCC
Q 037429 106 PLNVFLLMDTGGGLIWTQCQP 126 (402)
Q Consensus 106 ~q~~~v~~DTGS~~~Wv~~~~ 126 (402)
+|.+..++|||-+++-+.-..
T Consensus 29 gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 29 SVYITALLDSGADITIISEED 49 (124)
T ss_dssp EEEEEEEECTTCSSCEEETTT
T ss_pred CEEEEEEecCCCCcEEEeccc
Confidence 377899999999999997543
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=44.07 E-value=19 Score=31.15 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=22.6
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQC 124 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~ 124 (402)
.+.|.||- |.+..++|||.+++-+.-
T Consensus 10 ~vtv~I~G--q~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIGG--QLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred eEEEEECC--EEEEEEEecCCCceEEec
Confidence 57799994 999999999999998863
No 49
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=37.21 E-value=26 Score=32.37 Aligned_cols=34 Identities=15% Similarity=0.171 Sum_probs=25.7
Q ss_pred CCeEEEEE---EEeCC---CCcEEEEEEECCCCceEEeCC
Q 037429 92 EGFYYIVQ---VGIGS---PPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 92 ~~~~Y~~~---i~vGt---P~q~~~v~~DTGS~~~Wv~~~ 125 (402)
..+.|.++ |.||. +.....++||||++++++|..
T Consensus 191 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 191 SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 34567665 46775 246789999999999999864
No 50
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=33.27 E-value=28 Score=32.10 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=24.6
Q ss_pred CCeEEEEE---EEeCC-CCcEEEEEEECCCCceEEeCC
Q 037429 92 EGFYYIVQ---VGIGS-PPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 92 ~~~~Y~~~---i~vGt-P~q~~~v~~DTGS~~~Wv~~~ 125 (402)
..+.|.++ |.||. +.....++||||++++++|..
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 187 SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 34556655 56775 335678999999999999864
No 51
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=31.38 E-value=31 Score=31.88 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=24.9
Q ss_pred CCeEEEEE---EEeCCC---CcEEEEEEECCCCceEEeCC
Q 037429 92 EGFYYIVQ---VGIGSP---PLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 92 ~~~~Y~~~---i~vGtP---~q~~~v~~DTGS~~~Wv~~~ 125 (402)
..+.|.++ |.||.- .....++||||++++++|..
T Consensus 190 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 190 KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 34556654 578762 35678999999999999864
No 52
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=30.48 E-value=32 Score=31.66 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=24.2
Q ss_pred CeEEEEE---EEeCCC--CcEEEEEEECCCCceEEeCC
Q 037429 93 GFYYIVQ---VGIGSP--PLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 93 ~~~Y~~~---i~vGtP--~q~~~v~~DTGS~~~Wv~~~ 125 (402)
.+.|.++ |.||.+ .....++||||++++++|..
T Consensus 192 ~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 192 RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 4556554 577762 34578999999999999864
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=29.81 E-value=38 Score=31.19 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=25.0
Q ss_pred CCeEEEEE---EEeCCC---CcEEEEEEECCCCceEEeCC
Q 037429 92 EGFYYIVQ---VGIGSP---PLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 92 ~~~~Y~~~---i~vGtP---~q~~~v~~DTGS~~~Wv~~~ 125 (402)
..+.|.++ |.||.- .....+++|||++++++|..
T Consensus 186 ~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 186 SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 34556665 577752 35688999999999999864
No 54
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=29.61 E-value=40 Score=29.57 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=23.5
Q ss_pred CeEEEEE---EEeCCC-----CcEEEEEEECCCCceEEeC
Q 037429 93 GFYYIVQ---VGIGSP-----PLNVFLLMDTGGGLIWTQC 124 (402)
Q Consensus 93 ~~~Y~~~---i~vGtP-----~q~~~v~~DTGS~~~Wv~~ 124 (402)
.+.|.++ |.||.- .....++||||++++++|.
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 3456665 577752 3457899999999999975
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=29.30 E-value=36 Score=31.36 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=24.4
Q ss_pred CCeEEEEEE---EeCC--CCcEEEEEEECCCCceEEeCC
Q 037429 92 EGFYYIVQV---GIGS--PPLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 92 ~~~~Y~~~i---~vGt--P~q~~~v~~DTGS~~~Wv~~~ 125 (402)
..+.|.+++ .||. +.....+++|||++++++|..
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 187 SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 345566654 6775 234578999999999999864
No 56
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=26.14 E-value=54 Score=28.48 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=23.8
Q ss_pred CeEEEE---EEEeCCC----CcEEEEEEECCCCceEEeCC
Q 037429 93 GFYYIV---QVGIGSP----PLNVFLLMDTGGGLIWTQCQ 125 (402)
Q Consensus 93 ~~~Y~~---~i~vGtP----~q~~~v~~DTGS~~~Wv~~~ 125 (402)
.+.|.+ .|.||.- .....+++|||++++++|..
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 345555 4578752 34578999999999999864
No 57
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=25.75 E-value=58 Score=28.10 Aligned_cols=26 Identities=27% Similarity=0.258 Sum_probs=22.5
Q ss_pred EEEEEeCCCCcEEEEEEECCCCceEEeC
Q 037429 97 IVQVGIGSPPLNVFLLMDTGGGLIWTQC 124 (402)
Q Consensus 97 ~~~i~vGtP~q~~~v~~DTGS~~~Wv~~ 124 (402)
.+++.||- |.+..++|||.+++-+.-
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEECS
T ss_pred cEEEEECC--EEEeeeecccCCceeeec
Confidence 57789985 999999999999998853
No 58
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=20.44 E-value=90 Score=28.97 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=22.2
Q ss_pred EEEEE---EEeCCC----CcEEEEE-EECCCCceEEeCC
Q 037429 95 YYIVQ---VGIGSP----PLNVFLL-MDTGGGLIWTQCQ 125 (402)
Q Consensus 95 ~Y~~~---i~vGtP----~q~~~v~-~DTGS~~~Wv~~~ 125 (402)
.|.++ |.||.- .....++ ||||++++++|..
T Consensus 210 ~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~ 248 (361)
T 1mpp_A 210 FWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSS 248 (361)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHH
T ss_pred EEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHH
Confidence 55554 678752 1335788 9999999999864
Done!