Your job contains 1 sequence.
>037430
MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR
VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV
GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL
KAGNAYHKFRVKRNCWPK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037430
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122189 - symbol:AT4G36130 species:3702 "Arabi... 996 2.1e-100 1
TAIR|locus:2060917 - symbol:EMB2296 "embryo defective 229... 995 2.7e-100 1
TAIR|locus:2080968 - symbol:AT3G51190 species:3702 "Arabi... 943 8.7e-95 1
UNIPROTKB|F1NIX0 - symbol:RPL8 "Uncharacterized protein" ... 763 1.0e-75 1
FB|FBgn0261602 - symbol:RpL8 "Ribosomal protein L8" speci... 761 1.7e-75 1
UNIPROTKB|Q3T0S6 - symbol:RPL8 "60S ribosomal protein L8"... 757 4.5e-75 1
UNIPROTKB|E2RIA8 - symbol:RPL8 "Uncharacterized protein" ... 757 4.5e-75 1
UNIPROTKB|E9PKZ0 - symbol:RPL8 "60S ribosomal protein L8"... 757 4.5e-75 1
UNIPROTKB|P62917 - symbol:RPL8 "60S ribosomal protein L8"... 757 4.5e-75 1
UNIPROTKB|F2Z567 - symbol:RPL8 "Uncharacterized protein" ... 757 4.5e-75 1
MGI|MGI:1350927 - symbol:Rpl8 "ribosomal protein L8" spec... 757 4.5e-75 1
RGD|619827 - symbol:Rpl8 "ribosomal protein L8" species:1... 757 4.5e-75 1
ZFIN|ZDB-GENE-040426-1670 - symbol:rpl8 "ribosomal protei... 753 1.2e-74 1
RGD|1561333 - symbol:RGD1561333 "similar to 60S ribosomal... 748 4.0e-74 1
DICTYBASE|DDB_G0274113 - symbol:rpl8 "60S ribosomal prote... 722 2.3e-71 1
POMBASE|SPAC1F7.13c - symbol:rpl801 "60S ribosomal protei... 721 2.9e-71 1
POMBASE|SPBC2F12.07c - symbol:rpl802 "60S ribosomal prote... 721 2.9e-71 1
POMBASE|SPBC839.04 - symbol:rpl803 "60S ribosomal protein... 721 2.9e-71 1
UNIPROTKB|E1BHY4 - symbol:E1BHY4 "Uncharacterized protein... 716 9.9e-71 1
SGD|S000002104 - symbol:RPL2A "Ribosomal 60S subunit prot... 716 9.9e-71 1
SGD|S000001280 - symbol:RPL2B "Ribosomal 60S subunit prot... 716 9.9e-71 1
WB|WBGene00004413 - symbol:rpl-2 species:6239 "Caenorhabd... 714 1.6e-70 1
ASPGD|ASPL0000046534 - symbol:AN2275 species:162425 "Emer... 702 3.0e-69 1
GENEDB_PFALCIPARUM|PFE0845c - symbol:PFE0845c "60S riboso... 683 3.1e-67 1
UNIPROTKB|Q8I3T9 - symbol:PFE0845c "60S ribosomal protein... 683 3.1e-67 1
UNIPROTKB|K7GRF2 - symbol:RPL8 "Uncharacterized protein" ... 650 9.7e-64 1
UNIPROTKB|G3V1A1 - symbol:RPL8 "Ribosomal protein L8, iso... 620 1.5e-60 1
UNIPROTKB|E9PKU4 - symbol:RPL8 "60S ribosomal protein L8"... 522 3.6e-50 1
UNIPROTKB|K7GNY4 - symbol:RPL8 "Uncharacterized protein" ... 522 3.6e-50 1
UNIPROTKB|E9PIZ3 - symbol:RPL8 "60S ribosomal protein L8"... 454 5.7e-43 1
UNIPROTKB|K7GLA0 - symbol:RPL8 "Uncharacterized protein" ... 454 5.7e-43 1
UNIPROTKB|K7GSL7 - symbol:RPL8 "Uncharacterized protein" ... 451 1.2e-42 1
UNIPROTKB|K7GNM9 - symbol:RPL8 "Uncharacterized protein" ... 336 1.8e-30 1
UNIPROTKB|F1LU36 - symbol:F1LU36 "Uncharacterized protein... 314 3.9e-28 1
TIGR_CMR|BA_0113 - symbol:BA_0113 "ribosomal protein L2" ... 205 1.4e-16 1
UNIPROTKB|P60422 - symbol:rplB species:83333 "Escherichia... 202 2.9e-16 1
UNIPROTKB|P0C495 - symbol:rpl2-A "50S ribosomal protein L... 192 3.3e-15 1
UNIPROTKB|P0C496 - symbol:rpl2-A "50S ribosomal protein L... 192 3.3e-15 1
UNIPROTKB|P0C497 - symbol:rpl2-A "50S ribosomal protein L... 192 3.3e-15 1
UNIPROTKB|Q6EN83 - symbol:rpl2-A "50S ribosomal protein L... 192 3.3e-15 1
GENEDB_PFALCIPARUM|PF11_0337 - symbol:PF11_0337 "50S ribo... 194 4.3e-15 1
UNIPROTKB|Q8II37 - symbol:PF11_0337 "Mitochondrial riboso... 194 4.3e-15 1
TIGR_CMR|GSU_2854 - symbol:GSU_2854 "ribosomal protein L2... 190 5.4e-15 1
TIGR_CMR|ECH_0412 - symbol:ECH_0412 "ribosomal protein L2... 188 8.8e-15 1
TIGR_CMR|SO_0234 - symbol:SO_0234 "ribosomal protein L2" ... 188 8.8e-15 1
TIGR_CMR|CHY_2306 - symbol:CHY_2306 "ribosomal protein L2... 187 1.1e-14 1
UNIPROTKB|E9PP36 - symbol:RPL8 "60S ribosomal protein L8"... 185 1.8e-14 1
UNIPROTKB|K7GST6 - symbol:RPL8 "Uncharacterized protein" ... 185 1.8e-14 1
TIGR_CMR|DET_0477 - symbol:DET_0477 "ribosomal protein L2... 184 2.3e-14 1
UNIPROTKB|Q9KNY7 - symbol:rplB "50S ribosomal protein L2"... 182 3.8e-14 1
TIGR_CMR|VC_2593 - symbol:VC_2593 "ribosomal protein L2" ... 182 3.8e-14 1
TIGR_CMR|SPO_0484 - symbol:SPO_0484 "ribosomal protein L2... 180 6.7e-14 1
TIGR_CMR|CPS_0870 - symbol:CPS_0870 "ribosomal protein L2... 178 1.0e-13 1
UNIPROTKB|K7GQ66 - symbol:RPL8 "Uncharacterized protein" ... 177 1.3e-13 1
TIGR_CMR|NSE_0269 - symbol:NSE_0269 "ribosomal protein L2... 177 1.5e-13 1
UNIPROTKB|K7GMQ4 - symbol:RPL8 "Uncharacterized protein" ... 176 1.6e-13 1
TIGR_CMR|APH_0283 - symbol:APH_0283 "ribosomal protein L2... 175 2.4e-13 1
TIGR_CMR|CBU_0241 - symbol:CBU_0241 "ribosomal protein L2... 173 4.1e-13 1
UNIPROTKB|P95052 - symbol:rplB "50S ribosomal protein L2"... 170 1.0e-12 1
UNIPROTKB|P0C8K6 - symbol:RPL2 "60S ribosomal protein L2,... 150 2.2e-12 2
UNIPROTKB|P92812 - symbol:RPL2 "60S ribosomal protein L2,... 150 2.2e-12 2
UNIPROTKB|Q2F969 - symbol:RPL2 "60S ribosomal protein L2,... 150 2.2e-12 2
TIGR_CMR|CJE_1872 - symbol:CJE_1872 "ribosomal protein L2... 159 1.9e-11 1
UNIPROTKB|F1NY85 - symbol:MRPL2 "Uncharacterized protein"... 157 2.3e-11 1
UNIPROTKB|Q9L0D7 - symbol:rplB "50S ribosomal protein L2"... 147 4.6e-10 1
UNIPROTKB|K7GL68 - symbol:RPL8 "Uncharacterized protein" ... 142 6.6e-10 1
CGD|CAL0005205 - symbol:orf19.5420 species:5476 "Candida ... 145 1.6e-09 1
UNIPROTKB|Q9AMK8 - symbol:rplB "50S ribosomal protein L2"... 142 8.4e-09 1
TAIR|locus:505006316 - symbol:AT2G44065 species:3702 "Ara... 130 2.9e-07 1
SGD|S000000776 - symbol:RML2 "Mitochondrial ribosomal pro... 106 5.7e-06 2
ASPGD|ASPL0000011317 - symbol:AN3649 species:162425 "Emer... 83 6.5e-06 3
RGD|1307147 - symbol:Mrpl2 "mitochondrial ribosomal prote... 120 2.1e-05 1
UNIPROTKB|Q498T4 - symbol:Mrpl2 "39S ribosomal protein L2... 120 2.1e-05 1
MGI|MGI:1351622 - symbol:Mrpl2 "mitochondrial ribosomal p... 120 2.1e-05 1
DICTYBASE|DDB_G0294036 - symbol:mrpl2 "ribosomal protein ... 117 3.7e-05 1
ZFIN|ZDB-GENE-050809-12 - symbol:im:6908224 "im:6908224" ... 117 4.7e-05 1
UNIPROTKB|Q5T653 - symbol:MRPL2 "39S ribosomal protein L2... 117 5.0e-05 1
UNIPROTKB|E2RCD7 - symbol:MRPL2 "Uncharacterized protein"... 116 6.7e-05 1
UNIPROTKB|F1RRN2 - symbol:MRPL2 "Uncharacterized protein"... 116 6.7e-05 1
UNIPROTKB|Q2TA12 - symbol:MRPL2 "39S ribosomal protein L2... 112 0.00021 1
WB|WBGene00018932 - symbol:mrpl-2 species:6239 "Caenorhab... 111 0.00031 1
>TAIR|locus:2122189 [details] [associations]
symbol:AT4G36130 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0003723 EMBL:AL161588 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL022141
EMBL:AL022373 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 ProtClustDB:CLSN2683927
EMBL:AF361610 EMBL:AF367335 EMBL:AY058221 EMBL:Z25971
IPI:IPI00523186 PIR:T04582 RefSeq:NP_195336.1 UniGene:At.2119
UniGene:At.72399 ProteinModelPortal:Q42064 SMR:Q42064 STRING:Q42064
PaxDb:Q42064 PRIDE:Q42064 EnsemblPlants:AT4G36130.1 GeneID:829770
KEGG:ath:AT4G36130 GeneFarm:407 TAIR:At4g36130 InParanoid:Q42064
OMA:DNDTSRI PhylomeDB:Q42064 Genevestigator:Q42064
GermOnline:AT4G36130 Uniprot:Q42064
Length = 258
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 178/198 (89%), Positives = 194/198 (97%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAV+CNVEHHV
Sbjct: 61 VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV ARASGDYA++I+HNPDNDT+R+KLPSG+KKI+PSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAGNAYHK+RVKRNCWPK
Sbjct: 181 KAGNAYHKYRVKRNCWPK 198
>TAIR|locus:2060917 [details] [associations]
symbol:EMB2296 "embryo defective 2296" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0005886 GO:GO:0005774 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:AC006201
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 OMA:GRVIRNQ EMBL:X86765
EMBL:AY128314 EMBL:BT001177 IPI:IPI00517953 PIR:C84559
RefSeq:NP_179393.1 UniGene:At.24098 UniGene:At.74928
ProteinModelPortal:P46286 SMR:P46286 IntAct:P46286 STRING:P46286
PaxDb:P46286 PRIDE:P46286 EnsemblPlants:AT2G18020.1 GeneID:816314
KEGG:ath:AT2G18020 GeneFarm:405 TAIR:At2g18020 InParanoid:P46286
PhylomeDB:P46286 ProtClustDB:CLSN2683927 Genevestigator:P46286
GermOnline:AT2G18020 Uniprot:P46286
Length = 258
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 180/198 (90%), Positives = 195/198 (98%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV EIIHDPGRGAPLAR
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
VTFRHPFR+ KQKELF+AAEGMYTGQF+YCGKKATL+VGNVLP+RSIPEGAVVCNVEHHV
Sbjct: 61 VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRGVLARASGDYA++I+HNPD+DTTR+KLPSG+KKI+PSGCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAGNAYHK+RVKRN WPK
Sbjct: 181 KAGNAYHKYRVKRNSWPK 198
>TAIR|locus:2080968 [details] [associations]
symbol:AT3G51190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AL132980 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 HOGENOM:HOG000232983 ProtClustDB:CLSN2683927
EMBL:DQ056619 IPI:IPI00528587 PIR:T45750 RefSeq:NP_190687.2
UniGene:At.53884 ProteinModelPortal:Q4PSL7 SMR:Q4PSL7 STRING:Q4PSL7
PaxDb:Q4PSL7 PRIDE:Q4PSL7 EnsemblPlants:AT3G51190.1 GeneID:824282
KEGG:ath:AT3G51190 GeneFarm:406 TAIR:At3g51190 InParanoid:Q4PSL7
OMA:IACGISA Genevestigator:Q4PSL7 GermOnline:AT3G51190
Uniprot:Q4PSL7
Length = 260
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 171/198 (86%), Positives = 189/198 (95%)
Query: 1 MGRVIRAQRKGA-GSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLA 59
MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V EIIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHH 119
RV FRHPFRYMKQKELF+AAEGMYTGQ++YCGKKA LMVGNVLP+ SIPEGAV+CNVE H
Sbjct: 61 RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120
Query: 120 VGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPL 179
VGDRG LARASGDYA++I+HNP+++TTRVKLPSG+KKI+PS CRAMIGQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180
Query: 180 LKAGNAYHKFRVKRNCWP 197
LKAGNAYHK++ KRNCWP
Sbjct: 181 LKAGNAYHKYKAKRNCWP 198
>UNIPROTKB|F1NIX0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ HAMAP:MF_01320_A
EMBL:AADN02011032 IPI:IPI00590272 Ensembl:ENSGALT00000026174
Uniprot:F1NIX0
Length = 269
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 135/198 (68%), Positives = 168/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKGPA+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 13 MGRVIRGQRKGAGSVFRAHVKHRKGPAKLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 72
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
+ FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 73 IAFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 132
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 133 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGIVAGGGRIDKPIL 192
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 193 KAGRAYHKYKAKRNCWPR 210
>FB|FBgn0261602 [details] [associations]
symbol:RpL8 "Ribosomal protein L8" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0008286 "insulin receptor signaling pathway"
evidence=IGI] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0008361 "regulation of cell size" evidence=IMP] [GO:0051298
"centrosome duplication" evidence=IMP] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:AE014296 GO:GO:0051298 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0000022 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 EMBL:AF098520
EMBL:AY071342 EMBL:BT014913 RefSeq:NP_524726.1 RefSeq:NP_728756.1
UniGene:Dm.6647 ProteinModelPortal:Q9V3G1 SMR:Q9V3G1
MINT:MINT-290075 STRING:Q9V3G1 PaxDb:Q9V3G1 PRIDE:Q9V3G1
EnsemblMetazoa:FBtr0072924 EnsemblMetazoa:FBtr0072925 GeneID:44251
KEGG:dme:Dmel_CG1263 FlyBase:FBgn0261602 InParanoid:Q9V3G1
OrthoDB:EOG4W3R3V PhylomeDB:Q9V3G1 ChiTaRS:RPL8 GenomeRNAi:44251
NextBio:837015 Bgee:Q9V3G1 GermOnline:CG1263 Uniprot:Q9V3G1
Length = 256
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 138/198 (69%), Positives = 165/198 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+RY +KELFIA EGM+TGQFVYCG+KATL +GNV+P+ +PEG ++CN+E
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LAR SG+YA +I+HN D TRVKLPSGAKK++PS RAM+G VAGGGR +KP+L
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++VKRN WPK
Sbjct: 181 KAGRAYHKYKVKRNSWPK 198
>UNIPROTKB|Q3T0S6 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ EMBL:BC102277 EMBL:BC151407 IPI:IPI00698077
RefSeq:NP_001029797.1 UniGene:Bt.48839 ProteinModelPortal:Q3T0S6
SMR:Q3T0S6 STRING:Q3T0S6 PRIDE:Q3T0S6 Ensembl:ENSBTAT00000037367
GeneID:535056 KEGG:bta:535056 CTD:6132 HOVERGEN:HBG079431
InParanoid:Q3T0S6 OrthoDB:EOG4XKV7P NextBio:20876611 Uniprot:Q3T0S6
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>UNIPROTKB|E2RIA8 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 EMBL:AAEX03008983
RefSeq:XP_858496.1 ProteinModelPortal:E2RIA8 SMR:E2RIA8
PRIDE:E2RIA8 Ensembl:ENSCAFT00000002627 GeneID:475130
KEGG:cfa:475130 NextBio:20851021 HAMAP:MF_01320_A Uniprot:E2RIA8
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>UNIPROTKB|E9PKZ0 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00976899 SMR:E9PKZ0 Ensembl:ENST00000528957
Ensembl:ENST00000532702 Uniprot:E9PKZ0
Length = 205
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>UNIPROTKB|P62917 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Reactome:REACT_116125
GO:GO:0000184 GO:GO:0006413 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0006415
GO:GO:0006414 InterPro:IPR008991 SUPFAM:SSF50104
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431
OrthoDB:EOG4XKV7P ChiTaRS:RPL8 EMBL:Z28407 EMBL:AB061821
EMBL:BT007379 EMBL:CR457046 EMBL:AK289459 EMBL:BC000047
EMBL:BC000077 EMBL:BC012197 EMBL:BC013104 EMBL:BC093064
EMBL:AB007168 IPI:IPI00012772 PIR:JN0923 RefSeq:NP_000964.1
RefSeq:NP_150644.1 UniGene:Hs.178551 ProteinModelPortal:P62917
SMR:P62917 IntAct:P62917 MINT:MINT-1135693 STRING:P62917
PhosphoSite:P62917 DMDM:51702823 PaxDb:P62917 PRIDE:P62917
DNASU:6132 Ensembl:ENST00000262584 Ensembl:ENST00000394920
GeneID:6132 KEGG:hsa:6132 UCSC:uc003zeb.3 GeneCards:GC08M145985
HGNC:HGNC:10368 MIM:604177 neXtProt:NX_P62917 PharmGKB:PA34768
InParanoid:P62917 PhylomeDB:P62917 GenomeRNAi:6132 NextBio:23815
ArrayExpress:P62917 Bgee:P62917 CleanEx:HS_RPL8
Genevestigator:P62917 GermOnline:ENSG00000161016 Uniprot:P62917
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>UNIPROTKB|F2Z567 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:GRVIRNQ CTD:6132 HAMAP:MF_01320_A
EMBL:CU468612 RefSeq:XP_001924964.1 UniGene:Ssc.53780
ProteinModelPortal:F2Z567 SMR:F2Z567 PRIDE:F2Z567
Ensembl:ENSSSCT00000031015 GeneID:100154456 KEGG:ssc:100154456
Uniprot:F2Z567
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>MGI|MGI:1350927 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 MGI:MGI:1350927 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P ChiTaRS:RPL8
EMBL:U67771 EMBL:AK088263 EMBL:AK131970 EMBL:AK145498 EMBL:AK167775
EMBL:AK168769 EMBL:BC043017 IPI:IPI00137787 RefSeq:NP_036183.1
UniGene:Mm.30066 ProteinModelPortal:P62918 SMR:P62918 STRING:P62918
PaxDb:P62918 PRIDE:P62918 Ensembl:ENSMUST00000004072 GeneID:26961
KEGG:mmu:26961 UCSC:uc007wmt.2 InParanoid:P62918 NextBio:304899
Bgee:P62918 CleanEx:MM_RPL8 Genevestigator:P62918
GermOnline:ENSMUSG00000003970 Uniprot:P62918
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>RGD|619827 [details] [associations]
symbol:Rpl8 "ribosomal protein L8" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
RGD:619827 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983
OMA:GRVIRNQ CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P
EMBL:X62145 EMBL:BC126063 IPI:IPI00215208 PIR:JU0177
RefSeq:NP_001030088.2 RefSeq:XP_002729189.1 RefSeq:XP_003750416.1
UniGene:Rn.127774 UniGene:Rn.9810 ProteinModelPortal:P62919
SMR:P62919 IntAct:P62919 STRING:P62919 PRIDE:P62919
Ensembl:ENSRNOT00000005960 Ensembl:ENSRNOT00000041984
GeneID:100360117 GeneID:100910370 GeneID:26962 KEGG:rno:100360117
KEGG:rno:100910370 KEGG:rno:26962 UCSC:RGD:619827 InParanoid:P62919
NextBio:608033 Genevestigator:P62919 GermOnline:ENSRNOG00000004497
GermOnline:ENSRNOG00000032635 Uniprot:P62919
Length = 257
Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
Identities = 135/198 (68%), Positives = 167/198 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>ZFIN|ZDB-GENE-040426-1670 [details] [associations]
symbol:rpl8 "ribosomal protein L8" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
InterPro:IPR023672 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 ZFIN:ZDB-GENE-040426-1670 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
CTD:6132 HOVERGEN:HBG079431 OrthoDB:EOG4XKV7P EMBL:BC059473
EMBL:BC065432 IPI:IPI00505170 RefSeq:NP_957007.1 UniGene:Dr.4091
ProteinModelPortal:Q6P0V6 SMR:Q6P0V6 STRING:Q6P0V6 PRIDE:Q6P0V6
Ensembl:ENSDART00000006948 Ensembl:ENSDART00000140039 GeneID:393686
KEGG:dre:393686 InParanoid:Q6P0V6 NextBio:20814689
ArrayExpress:Q6P0V6 Bgee:Q6P0V6 Uniprot:Q6P0V6
Length = 257
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 134/198 (67%), Positives = 166/198 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVFK+H HRKG A+ R +DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRHIDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQF+YCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VMFRDPYRFKKRTELFIAAEGIHTGQFIYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ +RVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKSRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>RGD|1561333 [details] [associations]
symbol:RGD1561333 "similar to 60S ribosomal protein L8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR023672
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 RGD:1561333
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 OMA:DNDTSRI OrthoDB:EOG4XKV7P
HAMAP:MF_01320_A IPI:IPI00368250 RefSeq:XP_001061778.1
RefSeq:XP_574690.1 Ensembl:ENSRNOT00000048691 GeneID:499374
KEGG:rno:499374 UCSC:RGD:1561333 CTD:499374 NextBio:702710
Uniprot:D4A6W6
Length = 257
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 134/198 (67%), Positives = 166/198 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGR APLA+
Sbjct: 1 MGRVIRDQRKGAGSVFRAHLKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRSAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG AYHK++ KRNCWP+
Sbjct: 181 KAGRAYHKYKAKRNCWPR 198
>DICTYBASE|DDB_G0274113 [details] [associations]
symbol:rpl8 "60S ribosomal protein L8" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
dictyBase:DDB_G0274113 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 OMA:GRVIRNQ EMBL:X15710 PIR:S06087
RefSeq:XP_644192.1 ProteinModelPortal:P13023 SMR:P13023
STRING:P13023 PRIDE:P13023 EnsemblProtists:DDB0185202
GeneID:8619621 KEGG:ddi:DDB_G0274113 ProtClustDB:PTZ00180
Uniprot:P13023
Length = 255
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 132/199 (66%), Positives = 162/199 (81%)
Query: 1 MGRVIRAQRKG-AGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLA 59
MGR+IRAQRKG AGSVF +HTHHRKG +FR+LD+ ER GY+KGVV EIIHDPGRGAPLA
Sbjct: 1 MGRIIRAQRKGKAGSVFGAHTHHRKGTPRFRALDYAERQGYVKGVVKEIIHDPGRGAPLA 60
Query: 60 RVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHH 119
RV F+ ++ K+LFIA EGM+TGQFV+ GKKATL +GN+LP+ +PEG ++CNVE
Sbjct: 61 RVVFKGLTQFKLDKQLFIAPEGMHTGQFVFAGKKATLTIGNILPIGKLPEGTIICNVEEK 120
Query: 120 VGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPL 179
+GD G +AR SG+YA I+SHNPD TR+KLPSG+KK + S RAMIG VAGGGR +KP+
Sbjct: 121 LGDCGAVARCSGNYATIVSHNPDEGVTRIKLPSGSKKNVSSLARAMIGIVAGGGRIDKPM 180
Query: 180 LKAGNAYHKFRVKRNCWPK 198
LKAG A+HK+RVK+N WPK
Sbjct: 181 LKAGRAFHKYRVKKNNWPK 199
>POMBASE|SPAC1F7.13c [details] [associations]
symbol:rpl801 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=ISM] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 PomBase:SPBC839.04
PomBase:SPAC1F7.13c PomBase:SPBC2F12.07c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 EMBL:X05036
EMBL:X51659 EMBL:X16392 EMBL:AB027845 PIR:S07377 PIR:T40711
RefSeq:NP_595244.1 RefSeq:NP_595709.1 RefSeq:XP_001713102.1
ProteinModelPortal:P08093 SMR:P08093 IntAct:P08093 STRING:P08093
PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1 EnsemblFungi:SPBC2F12.07c.1
EnsemblFungi:SPBC839.04.1 GeneID:2540366 GeneID:2541191
GeneID:5802952 KEGG:spo:SPAC1F7.13c KEGG:spo:SPBC2F12.07c
KEGG:spo:SPBC839.04 HOGENOM:HOG000232983 OMA:GRVIRNQ
OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 129/198 (65%), Positives = 158/198 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG AQ R+LDF ER+GY++GVV +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR+P+ Y E F+A EGMYTGQFVYCGK A L VGNVLPV +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG L R+SG+Y +I+ H+ D TRVKLPSGAKK++PS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+RVKRNCWP+
Sbjct: 180 KAGRAFHKYRVKRNCWPR 197
>POMBASE|SPBC2F12.07c [details] [associations]
symbol:rpl802 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=ISM] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
PomBase:SPBC839.04 PomBase:SPAC1F7.13c PomBase:SPBC2F12.07c
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 EMBL:X05036
EMBL:X51659 EMBL:X16392 EMBL:AB027845 PIR:S07377 PIR:T40711
RefSeq:NP_595244.1 RefSeq:NP_595709.1 RefSeq:XP_001713102.1
ProteinModelPortal:P08093 SMR:P08093 IntAct:P08093 STRING:P08093
PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1 EnsemblFungi:SPBC2F12.07c.1
EnsemblFungi:SPBC839.04.1 GeneID:2540366 GeneID:2541191
GeneID:5802952 KEGG:spo:SPAC1F7.13c KEGG:spo:SPBC2F12.07c
KEGG:spo:SPBC839.04 HOGENOM:HOG000232983 OMA:GRVIRNQ
OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 129/198 (65%), Positives = 158/198 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG AQ R+LDF ER+GY++GVV +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR+P+ Y E F+A EGMYTGQFVYCGK A L VGNVLPV +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG L R+SG+Y +I+ H+ D TRVKLPSGAKK++PS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+RVKRNCWP+
Sbjct: 180 KAGRAFHKYRVKRNCWPR 197
>POMBASE|SPBC839.04 [details] [associations]
symbol:rpl803 "60S ribosomal protein L8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0019843 "rRNA binding" evidence=ISM] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 PomBase:SPBC839.04 PomBase:SPAC1F7.13c
PomBase:SPBC2F12.07c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 EMBL:X05036 EMBL:X51659 EMBL:X16392 EMBL:AB027845
PIR:S07377 PIR:T40711 RefSeq:NP_595244.1 RefSeq:NP_595709.1
RefSeq:XP_001713102.1 ProteinModelPortal:P08093 SMR:P08093
IntAct:P08093 STRING:P08093 PRIDE:P08093 EnsemblFungi:SPAC1F7.13c.1
EnsemblFungi:SPBC2F12.07c.1 EnsemblFungi:SPBC839.04.1
GeneID:2540366 GeneID:2541191 GeneID:5802952 KEGG:spo:SPAC1F7.13c
KEGG:spo:SPBC2F12.07c KEGG:spo:SPBC839.04 HOGENOM:HOG000232983
OMA:GRVIRNQ OrthoDB:EOG41RT3W NextBio:20801494 Uniprot:P08093
Length = 253
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 129/198 (65%), Positives = 158/198 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIRAQRK +G +F++HT RKG AQ R+LDF ER+GY++GVV +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPGRGAPLAK 59
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR+P+ Y E F+A EGMYTGQFVYCGK A L VGNVLPV +PEG ++ NVE
Sbjct: 60 VAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTIISNVEEKA 119
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG L R+SG+Y +I+ H+ D TRVKLPSGAKK++PS R ++G VAGGGR +KPLL
Sbjct: 120 GDRGALGRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIVAGGGRIDKPLL 179
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+RVKRNCWP+
Sbjct: 180 KAGRAFHKYRVKRNCWPR 197
>UNIPROTKB|E1BHY4 [details] [associations]
symbol:E1BHY4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:DAAA02032881
IPI:IPI00710345 PRIDE:E1BHY4 Ensembl:ENSBTAT00000004630 OMA:KAGHAYH
NextBio:20867523 Uniprot:E1BHY4
Length = 257
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 128/197 (64%), Positives = 162/197 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVI QRKGA SVF++H HRKG A+ R++DF ER+GY+KG+V ++IHDPGRGAPLA+
Sbjct: 1 MGRVIHGQRKGASSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDVIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQ YCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQSGYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+YA +ISH+P+ TRVKLPSG+KK+I S RA++G VAGGG +KP+L
Sbjct: 121 GDRGKLARASGNYATVISHSPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGCIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWP 197
KAG+AYHK++ KRNCWP
Sbjct: 181 KAGHAYHKYKAKRNCWP 197
>SGD|S000002104 [details] [associations]
symbol:RPL2A "Ribosomal 60S subunit protein L2A" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
SGD:S000002104 EMBL:D50617 EMBL:BK006940 GO:GO:0003735
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 EMBL:U05820
RefSeq:NP_116688.3 GeneID:850590 KEGG:sce:YFR031C-A KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I KO:K02905 RefSeq:NP_116690.3 GeneID:850592
KEGG:sce:YFR032C-A EMBL:U17359 PIR:S50243 RefSeq:NP_012246.1
ProteinModelPortal:P0CX45 SMR:P0CX45 EnsemblFungi:YFR031C-A
EnsemblFungi:YIL018W GeneID:854794 KEGG:sce:YIL018W CYGD:YFR031c-a
EvolutionaryTrace:P0CX45 NextBio:966437 ArrayExpress:P0CX45
GermOnline:YFR031C-A Uniprot:P0CX45
Length = 254
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 128/198 (64%), Positives = 163/198 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G+V +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P++Y ++E+FIA EG++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+Y +II HNPD + TRV+LPSGAKK+I S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+R+KRN WPK
Sbjct: 181 KAGRAFHKYRLKRNSWPK 198
>SGD|S000001280 [details] [associations]
symbol:RPL2B "Ribosomal 60S subunit protein L2B" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 SGD:S000001280 EMBL:BK006942 GO:GO:0003735
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 PDB:4B6A PDBsum:4B6A EMBL:Z46881 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
RefSeq:NP_116688.3 GeneID:850590 KEGG:sce:YFR031C-A KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 KO:K02905
RefSeq:NP_116690.3 GeneID:850592 KEGG:sce:YFR032C-A PIR:S50243
RefSeq:NP_012246.1 EnsemblFungi:YFR031C-A EnsemblFungi:YIL018W
GeneID:854794 KEGG:sce:YIL018W NextBio:966437 EMBL:U17360
ProteinModelPortal:P0CX46 SMR:P0CX46 CYGD:YIL018w
GeneTree:ENSGT00390000009907 ArrayExpress:P0CX46 GermOnline:YIL018W
Uniprot:P0CX46
Length = 254
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 128/198 (64%), Positives = 163/198 (82%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGS+F SHT R+G A+ R+LD+ ER+GY++G+V +I+HD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGAGSIFTSHTRLRQGAAKLRTLDYAERHGYIRGIVKQIVHDSGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P++Y ++E+FIA EG++TGQF+Y GKKA+L VGNVLP+ S+PEG +V NVE
Sbjct: 61 VVFRDPYKYRLREEIFIANEGVHTGQFIYAGKKASLNVGNVLPLGSVPEGTIVSNVEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG LARASG+Y +II HNPD + TRV+LPSGAKK+I S R +IG +AGGGR +KPLL
Sbjct: 121 GDRGALARASGNYVIIIGHNPDENKTRVRLPSGAKKVISSDARGVIGVIAGGGRVDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+R+KRN WPK
Sbjct: 181 KAGRAFHKYRLKRNSWPK 198
>WB|WBGene00004413 [details] [associations]
symbol:rpl-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 EMBL:Z81453 GO:GO:0006412 GO:GO:0040011 GO:GO:0000003
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000009907 HOGENOM:HOG000232983 OMA:GRVIRNQ
PIR:T18676 RefSeq:NP_507940.1 ProteinModelPortal:Q9XVF7 SMR:Q9XVF7
DIP:DIP-24785N IntAct:Q9XVF7 MINT:MINT-1062067 STRING:Q9XVF7
PaxDb:Q9XVF7 PRIDE:Q9XVF7 EnsemblMetazoa:B0250.1.1
EnsemblMetazoa:B0250.1.2 GeneID:180343 KEGG:cel:CELE_B0250.1
UCSC:B0250.1.1 CTD:180343 WormBase:B0250.1 InParanoid:Q9XVF7
NextBio:908952 Uniprot:Q9XVF7
Length = 260
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 124/198 (62%), Positives = 160/198 (80%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGR IR QRKGAG +FKSH HRKG ++ R LD+ ER+GY+KG+V +IIHDPGRGAPLA
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
+ FR P++Y K +AAEGM+TGQF++CG KA + +GN++PV ++PEG +CNVE+
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRGV+ARASG+YA +I+HNPD TR++LPSGAKK++ S RAMIG VAGGGRT+KPLL
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG +YHK++ KRN WP+
Sbjct: 181 KAGRSYHKYKAKRNSWPR 198
>ASPGD|ASPL0000046534 [details] [associations]
symbol:AN2275 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 EMBL:BN001307
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 HOGENOM:HOG000232983
OMA:GRVIRNQ EnsemblFungi:CADANIAT00008967 Uniprot:C8VN22
Length = 254
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 130/198 (65%), Positives = 150/198 (75%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+F +HT K PAQFR LD+ ER+GY +GVV EIIHD GRGAPLA+
Sbjct: 1 MGRVIRNQRKGRGSIFTAHTRLNKAPAQFRVLDYAERHGYTRGVVKEIIHDAGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FRHP+++ E FIA EGMYTGQF+Y GK A L +GN+LP+ S+PEG V+ NVE
Sbjct: 61 VQFRHPYKFKHITETFIANEGMYTGQFIYAGKNAALTIGNILPLASVPEGTVISNVEEKA 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
GDRG L R SG+Y +I HNPD TRVKLPSGAKK+I + R MIG VAGGGRT+KPLL
Sbjct: 121 GDRGALGRTSGNYVTVIGHNPDEGKTRVKLPSGAKKVIKNTARGMIGIVAGGGRTDKPLL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KA A HKF VKRN WPK
Sbjct: 181 KASRAKHKFAVKRNSWPK 198
>GENEDB_PFALCIPARUM|PFE0845c [details] [associations]
symbol:PFE0845c "60S ribosomal subunit protein
L8, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL844504 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232983 OMA:GRVIRNQ ProtClustDB:PTZ00180 HSSP:P04257
RefSeq:XP_001351726.1 ProteinModelPortal:Q8I3T9 SMR:Q8I3T9
IntAct:Q8I3T9 MINT:MINT-1653669 PRIDE:Q8I3T9
EnsemblProtists:PFE0845c:mRNA GeneID:812984 KEGG:pfa:PFE0845c
EuPathDB:PlasmoDB:PF3D7_0516900 Uniprot:Q8I3T9
Length = 260
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 120/198 (60%), Positives = 155/198 (78%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+FKSH HHRKG A+ R LD+ E+ GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V F+ +Y K++EL IA+EGM+TGQ++ CG KA L VGN+LP+ +PEG ++CN+EH
Sbjct: 61 VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
G+RG L +ASG YA ++ + D T+V+LPSGAKK I + RAM+G V GGR +KP+L
Sbjct: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDAKARAMVGVVGAGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+RVKRNCWPK
Sbjct: 181 KAGVAHHKYRVKRNCWPK 198
>UNIPROTKB|Q8I3T9 [details] [associations]
symbol:PFE0845c "60S ribosomal protein L8, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AL844504 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 KO:K02938
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232983 OMA:GRVIRNQ ProtClustDB:PTZ00180 HSSP:P04257
RefSeq:XP_001351726.1 ProteinModelPortal:Q8I3T9 SMR:Q8I3T9
IntAct:Q8I3T9 MINT:MINT-1653669 PRIDE:Q8I3T9
EnsemblProtists:PFE0845c:mRNA GeneID:812984 KEGG:pfa:PFE0845c
EuPathDB:PlasmoDB:PF3D7_0516900 Uniprot:Q8I3T9
Length = 260
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 120/198 (60%), Positives = 155/198 (78%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKG GS+FKSH HHRKG A+ R LD+ E+ GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGRGSIFKSHNHHRKGAAKLRHLDYCEKKGYIKGLVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V F+ +Y K++EL IA+EGM+TGQ++ CG KA L VGN+LP+ +PEG ++CN+EH
Sbjct: 61 VIFKRTEKYGKKEELIIASEGMFTGQYISCGTKAPLSVGNILPIGKMPEGTLICNLEHRT 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
G+RG L +ASG YA ++ + D T+V+LPSGAKK I + RAM+G V GGR +KP+L
Sbjct: 121 GNRGTLVKASGCYATVVGQSEDGKKTKVRLPSGAKKTIDAKARAMVGVVGAGGRIDKPIL 180
Query: 181 KAGNAYHKFRVKRNCWPK 198
KAG A+HK+RVKRNCWPK
Sbjct: 181 KAGVAHHKYRVKRNCWPK 198
>UNIPROTKB|K7GRF2 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034872 Uniprot:K7GRF2
Length = 176
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 119/176 (67%), Positives = 147/176 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTE 176
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G VAGGGR +
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRID 176
>UNIPROTKB|G3V1A1 [details] [associations]
symbol:RPL8 "Ribosomal protein L8, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH471162 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR13691 ChiTaRS:RPL8 UniGene:Hs.178551 HGNC:HGNC:10368
EMBL:AF235103 ProteinModelPortal:G3V1A1 SMR:G3V1A1 PRIDE:G3V1A1
Ensembl:ENST00000529920 ArrayExpress:G3V1A1 Bgee:G3V1A1
Uniprot:G3V1A1
Length = 167
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 113/167 (67%), Positives = 140/167 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIG 167
GDRG LARASG+YA +ISHNP+ TRVKLPSG+KK+I S RA++G
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
>UNIPROTKB|E9PKU4 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368 EMBL:AF235103
IPI:IPI01015034 ProteinModelPortal:E9PKU4 SMR:E9PKU4
Ensembl:ENST00000533397 ArrayExpress:E9PKU4 Bgee:E9PKU4
Uniprot:E9PKU4
Length = 235
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 95/138 (68%), Positives = 117/138 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIIS 138
GDRG LARASG+YA +IS
Sbjct: 121 GDRGKLARASGNYATVIS 138
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 57/176 (32%), Positives = 78/176 (44%)
Query: 35 GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQ--KELFI-AAEGMYTGQFV--- 88
G+R G A + H G A L V F Y+K K++ G + V
Sbjct: 7 GQRKGAGSVFRAHVKHRKG-AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRD 65
Query: 89 -YCGKKATLMVGNVLPVRSIPEGAVV-CNVEHHVGDRGVL---ARASGDYAVIISHNPDN 143
Y KK T + + I G V C + + VL G + P
Sbjct: 66 PYRFKKRTELF---IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP-G 121
Query: 144 DTTRVKLPSGA-KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
D ++ SG +I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 122 DRGKLARASGNYATVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 177
>UNIPROTKB|K7GNY4 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035638 Uniprot:K7GNY4
Length = 236
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 95/138 (68%), Positives = 117/138 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
V FR P+R+ K+ ELFIAAEG++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 121 GDRGVLARASGDYAVIIS 138
GDRG LARASG+YA +IS
Sbjct: 121 GDRGKLARASGNYATVIS 138
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 57/176 (32%), Positives = 78/176 (44%)
Query: 35 GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQ--KELFI-AAEGMYTGQFV--- 88
G+R G A + H G A L V F Y+K K++ G + V
Sbjct: 7 GQRKGAGSVFRAHVKHRKG-AARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRD 65
Query: 89 -YCGKKATLMVGNVLPVRSIPEGAVV-CNVEHHVGDRGVL---ARASGDYAVIISHNPDN 143
Y KK T + + I G V C + + VL G + P
Sbjct: 66 PYRFKKRTELF---IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP-G 121
Query: 144 DTTRVKLPSGA-KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
D ++ SG +I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 122 DRGKLARASGNYATVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 177
>UNIPROTKB|E9PIZ3 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00975850 ProteinModelPortal:E9PIZ3 SMR:E9PIZ3
Ensembl:ENST00000534813 ArrayExpress:E9PIZ3 Bgee:E9PIZ3
Uniprot:E9PIZ3
Length = 221
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 91/164 (55%), Positives = 113/164 (68%)
Query: 35 GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKA 94
G+R G A + H G A L V F Y+K G++TGQFVYCGKKA
Sbjct: 7 GQRKGAGSVFRAHVKHRKG-AARLRAVDFAERHGYIK-------GIGIHTGQFVYCGKKA 58
Query: 95 TLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGA 154
L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+
Sbjct: 59 QLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGS 118
Query: 155 KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 119 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 162
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGV 44
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGI 44
>UNIPROTKB|K7GLA0 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000033850 Uniprot:K7GLA0
Length = 221
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 91/164 (55%), Positives = 113/164 (68%)
Query: 35 GERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKA 94
G+R G A + H G A L V F Y+K G++TGQFVYCGKKA
Sbjct: 7 GQRKGAGSVFRAHVKHRKG-AARLRAVDFAERHGYIK-------GIGIHTGQFVYCGKKA 58
Query: 95 TLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGA 154
L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +ISHNP+ TRVKLPSG+
Sbjct: 59 QLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGS 118
Query: 155 KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 119 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 162
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGV 44
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGI 44
>UNIPROTKB|K7GSL7 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035903 Uniprot:K7GSL7
Length = 202
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 80/120 (66%), Positives = 100/120 (83%)
Query: 79 AEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIIS 138
A+G++TGQFVYCGKKA L +GNVLPV ++PEG +VC +E GDRG LARASG+YA +IS
Sbjct: 24 AKGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 83
Query: 139 HNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
HNP+ TRVKLPSG+KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 84 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 143
Score = 111 (44.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 37 RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQK 73
R+GY+KG+V +IIHDPGRGAPLA+ F Y +K
Sbjct: 2 RHGYIKGIVKDIIHDPGRGAPLAKGIHTGQFVYCGKK 38
>UNIPROTKB|K7GNM9 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
Pfam:PF00181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000035195 Uniprot:K7GNM9
Length = 114
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 64/103 (62%), Positives = 80/103 (77%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +IIHDPGRGAPLA+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLP 103
V FR P+R+ K+ ELFIAAEG++TG V G G +LP
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGHLV-TGASWPEPRGTMLP 102
>UNIPROTKB|F1LU36 [details] [associations]
symbol:F1LU36 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002171
InterPro:IPR022669 Pfam:PF03947 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 GeneTree:ENSGT00390000009907
IPI:IPI00566668 Ensembl:ENSRNOT00000046734 Uniprot:F1LU36
Length = 205
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 70/161 (43%), Positives = 99/161 (61%)
Query: 37 RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFI-AAEGMYTGQFVYCGKKAT 95
++GY+KG+V IIHDPG PL +V +P+R+ K + + + G + C
Sbjct: 1 QHGYIKGIVKGIIHDPGHD-PLVKVVL-NPYRFKKWMDGAVHRSRGNLC--WTVC---VQ 53
Query: 96 LMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAK 155
L +GNVLPVR++PEG C +E GD G L+ +Y +ISHNP+ TR+KLPSG K
Sbjct: 54 LNIGNVLPVRTMPEGTNQCCLEEEPGDSGKLS----NYTTVISHNPETKKTRMKLPSG-K 108
Query: 156 KIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW 196
K+I S + + G VAGG +K +LKAG AY K++ +RNCW
Sbjct: 109 KVISSANKGVAGVVAGGRSIDKLILKAGRAYLKYKAERNCW 149
>TIGR_CMR|BA_0113 [details] [associations]
symbol:BA_0113 "ribosomal protein L2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_842681.1 RefSeq:YP_016718.1 RefSeq:YP_026399.1
ProteinModelPortal:Q81VS7 SMR:Q81VS7 DNASU:1087436
EnsemblBacteria:EBBACT00000013045 EnsemblBacteria:EBBACT00000017422
EnsemblBacteria:EBBACT00000020733 GeneID:1087436 GeneID:2819234
GeneID:2850447 KEGG:ban:BA_0113 KEGG:bar:GBAA_0113 KEGG:bat:BAS0113
BioCyc:BANT260799:GJAJ-124-MONOMER
BioCyc:BANT261594:GJ7F-126-MONOMER Uniprot:Q81VS7
Length = 276
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/181 (30%), Positives = 89/181 (49%)
Query: 7 AQRKGAGSVFKSHTHHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFR 64
+++ G + K H+ G Q+R +DF + G VA I +DP R A +A + +
Sbjct: 38 SKKAGRNNQGKITVRHQGGGHKRQYRIIDFKRNKDGIPGRVATIEYDPNRSANIALINYV 97
Query: 65 HPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRG 124
+K +A + + G + G +A + +GN LP+ +IP G VV N+E G G
Sbjct: 98 DG-----EKRYILAPKNLEVGMEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGG 152
Query: 125 VLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G
Sbjct: 153 QLVRSAGTSAQVLGK--EGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGK 207
Query: 185 A 185
A
Sbjct: 208 A 208
>UNIPROTKB|P60422 [details] [associations]
symbol:rplB species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0008270
EMBL:U18997 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 PDB:2VHM PDBsum:2VHM PDB:2RDO PDBsum:2RDO
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D PDB:4GAR PDB:4GAU
PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2
PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T
PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA
PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK
PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN
PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P
PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT
PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
EMBL:X02613 OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
PIR:E23129 RefSeq:NP_417776.1 RefSeq:YP_492115.1
ProteinModelPortal:P60422 SMR:P60422 DIP:DIP-35747N IntAct:P60422
MINT:MINT-1322809 PaxDb:P60422 PRIDE:P60422
EnsemblBacteria:EBESCT00000003048 EnsemblBacteria:EBESCT00000015239
GeneID:12932295 GeneID:947820 KEGG:ecj:Y75_p3859 KEGG:eco:b3317
PATRIC:32122066 EchoBASE:EB0858 EcoGene:EG10865
BioCyc:EcoCyc:EG10865-MONOMER BioCyc:ECOL316407:JW3279-MONOMER
EvolutionaryTrace:P60422 Genevestigator:P60422 Uniprot:P60422
Length = 273
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 50/157 (31%), Positives = 80/157 (50%)
Query: 29 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV 88
+R +DF + VV + +DP R A +A V ++ ++ +A +G+ G +
Sbjct: 62 YRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAPKGLKAGDQI 116
Query: 89 YCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRV 148
G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D +
Sbjct: 117 QSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTL 174
Query: 149 KLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+L SG + + + CRA +G+V + L KAG A
Sbjct: 175 RLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAA 211
>UNIPROTKB|P0C495 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0016020 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:AY522331 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 ProteinModelPortal:P0C495 SMR:P0C495
PRIDE:P0C495 Gramene:P0C495 HOGENOM:HOG000232982
Genevestigator:P0C495 Uniprot:P0C495
Length = 273
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 53/177 (29%), Positives = 82/177 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G + I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 68 RYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
+K + G G + G K + +GN LP+ +P G + N+E G G LA
Sbjct: 98 ----EKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
RA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS 208
>UNIPROTKB|P0C496 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:AY522329 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
RefSeq:YP_654244.1 RefSeq:YP_654261.1 ProteinModelPortal:P0C496
SMR:P0C496 PRIDE:P0C496 GeneID:4126865 GeneID:4126903
Gramene:P0C496 ProtClustDB:CLSC858538 Uniprot:P0C496
Length = 273
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 53/177 (29%), Positives = 82/177 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G + I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 68 RYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
+K + G G + G K + +GN LP+ +P G + N+E G G LA
Sbjct: 98 ----EKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
RA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS 208
>UNIPROTKB|P0C497 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0009507 GO:GO:0009536 GO:GO:0016020 GO:GO:0006412
GO:GO:0016740 GO:GO:0003723 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104 EMBL:M22826
EMBL:L40578 ProtClustDB:CHL00052 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PIR:JQ0270 RefSeq:NP_039427.2 RefSeq:NP_039463.2
ProteinModelPortal:P0C497 SMR:P0C497 STRING:P0C497 GeneID:3131421
GeneID:3131424 KEGG:osa:3131421 KEGG:osa:3131424 Gramene:P0C497
eggNOG:COG0090 KO:K02886 Uniprot:P0C497
Length = 273
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 53/177 (29%), Positives = 82/177 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G + I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 68 RYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
+K + G G + G K + +GN LP+ +P G + N+E G G LA
Sbjct: 98 ----EKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
RA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS 208
>UNIPROTKB|Q6EN83 [details] [associations]
symbol:rpl2-A "50S ribosomal protein L2, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AP006728
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 RefSeq:YP_052793.1
RefSeq:YP_052839.1 ProteinModelPortal:Q6EN83 SMR:Q6EN83
GeneID:2885923 GeneID:2885924 Gramene:Q6EN83 ProtClustDB:CHL00052
Gene3D:4.10.950.10 HAMAP:MF_01320_B InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 Uniprot:Q6EN83
Length = 273
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 53/177 (29%), Positives = 82/177 (46%)
Query: 10 KGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPF 67
KG S HR G + +R +DF + G + I +DP R A + + +
Sbjct: 39 KGRNSRGIITARHRGGGHKRLYRKIDFRRNQKDISGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 68 RYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
+K + G G + G K + +GN LP+ +P G + N+E G G LA
Sbjct: 98 ----EKGYILHPRGAIIGDTIVSGTKVPISMGNALPLTDMPLGTAIHNIEITRGRGGQLA 153
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
RA+G A +I+ + T R LPSG +++ C A +GQV G +K L +AG+
Sbjct: 154 RAAGAVAKLIAKEGKSATLR--LPSGEVRLVSQNCLATVGQVGNVGVNQKSLGRAGS 208
>GENEDB_PFALCIPARUM|PF11_0337 [details] [associations]
symbol:PF11_0337 "50S ribosomal protein L2,
putative" species:5833 "Plasmodium falciparum" [GO:0000315
"organellar large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 194 (73.4 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 60/180 (33%), Positives = 85/180 (47%)
Query: 6 RAQRKGAGSVFKSHTHHRKGP-AQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTF 63
R + G +V K HR G AQ R +DF + V I +DP R A +A + +
Sbjct: 85 RIKNSGRNNVGKITVRHRGGGHAQRLRFIDFKRSRKDIYSTVLRIEYDPSRSAHIALIQY 144
Query: 64 RHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDR 123
+A + G + K A + GN LP+++IP G+++ N+E G
Sbjct: 145 EDGVL-----SYILAPLLLRPGDKIIASKYANINPGNSLPLQNIPVGSIIHNIEMRPGAG 199
Query: 124 GVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
G L RA+G YA IIS DN+ +KL S + P C A IGQV+ R + L KAG
Sbjct: 200 GQLIRAAGTYATIISK--DNEYATIKLKSTEIRKFPLQCWATIGQVSNLERHMRILGKAG 257
>UNIPROTKB|Q8II37 [details] [associations]
symbol:PF11_0337 "Mitochondrial ribosomal protein L2"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 GO:GO:0005739 GO:GO:0006412 GO:GO:0016740
GO:GO:0003723 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014186 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0020011 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 PANTHER:PTHR13691:SF5
HSSP:P04257 RefSeq:XP_001348008.1 ProteinModelPortal:Q8II37
SMR:Q8II37 EnsemblProtists:PF11_0337:mRNA GeneID:810884
KEGG:pfa:PF11_0337 EuPathDB:PlasmoDB:PF3D7_1132700 OMA:NEYATIK
ProtClustDB:PTZ00031 Uniprot:Q8II37
Length = 333
Score = 194 (73.4 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 60/180 (33%), Positives = 85/180 (47%)
Query: 6 RAQRKGAGSVFKSHTHHRKGP-AQ-FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTF 63
R + G +V K HR G AQ R +DF + V I +DP R A +A + +
Sbjct: 85 RIKNSGRNNVGKITVRHRGGGHAQRLRFIDFKRSRKDIYSTVLRIEYDPSRSAHIALIQY 144
Query: 64 RHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDR 123
+A + G + K A + GN LP+++IP G+++ N+E G
Sbjct: 145 EDGVL-----SYILAPLLLRPGDKIIASKYANINPGNSLPLQNIPVGSIIHNIEMRPGAG 199
Query: 124 GVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
G L RA+G YA IIS DN+ +KL S + P C A IGQV+ R + L KAG
Sbjct: 200 GQLIRAAGTYATIISK--DNEYATIKLKSTEIRKFPLQCWATIGQVSNLERHMRILGKAG 257
>TIGR_CMR|GSU_2854 [details] [associations]
symbol:GSU_2854 "ribosomal protein L2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:NP_953897.1
ProteinModelPortal:P60401 SMR:P60401 GeneID:2685862
KEGG:gsu:GSU2854 PATRIC:22028555
BioCyc:GSUL243231:GH27-2828-MONOMER Uniprot:P60401
Length = 274
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 54/180 (30%), Positives = 86/180 (47%)
Query: 9 RKGAGSVFKSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHP 66
R G + H H+K ++R +DF + VA I +DP R A R+ H
Sbjct: 43 RNSFGRITARHIGGGHKK---KYRIIDFRRNKVEVPAKVASIEYDPNRSA---RIALLH- 95
Query: 67 FRYMKQKELFIAAE-GMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGV 125
Y + +I A + G + A + GN LP+R+IP G ++ N+E +G G
Sbjct: 96 --YADGAKRYILAPLDLKVGDSIVASSNADIKPGNALPLRAIPLGTIIHNIELKIGKGGQ 153
Query: 126 LARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
LAR++G +A +++ + +VKLPSG +++ C A IGQV + KAG +
Sbjct: 154 LARSAGTFAQLMAK--EGKYAQVKLPSGEVRMVLLDCMATIGQVGNIDHENVSIGKAGRS 211
>TIGR_CMR|ECH_0412 [details] [associations]
symbol:ECH_0412 "ribosomal protein L2" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 OMA:LVRQECM
RefSeq:YP_507230.1 ProteinModelPortal:Q2GH53 SMR:Q2GH53
STRING:Q2GH53 GeneID:3927141 KEGG:ech:ECH_0412 PATRIC:20576301
BioCyc:ECHA205920:GJNR-413-MONOMER Uniprot:Q2GH53
Length = 276
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 57/183 (31%), Positives = 87/183 (47%)
Query: 3 RVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVT 62
++ R R G + H R +R +DF + V + +DP R A +A ++
Sbjct: 37 KISRGGRNSRGVITVRH-RGRGHKRLYRVVDFKRNKVGVSATVERLEYDPNRTAFIALLS 95
Query: 63 FRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGD 122
+ +K IA G+ G V G A ++ GN L ++SIP G V NVE G+
Sbjct: 96 YDDG-----EKSYIIAPNGLKKGDVVISGDGADILPGNCLLLKSIPVGTFVHNVELRPGN 150
Query: 123 RGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKA 182
GV+AR++G YA ++S D ++L SG + + S CRA IG V+ L KA
Sbjct: 151 GGVIARSAGTYAQLMSK--DGMYVLLRLSSGEIRKVLSDCRATIGIVSNLDNQNVKLGKA 208
Query: 183 GNA 185
G +
Sbjct: 209 GRS 211
>TIGR_CMR|SO_0234 [details] [associations]
symbol:SO_0234 "ribosomal protein L2" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_715874.1 ProteinModelPortal:Q8EK65 SMR:Q8EK65
GeneID:1168117 KEGG:son:SO_0234 PATRIC:23520161 Uniprot:Q8EK65
Length = 274
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 9 RKGAGSVFKSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHP 66
R G + H H++ +R +DF + + + +DP R A +A V +
Sbjct: 43 RNNTGRITVRHVGGGHKQ---HYRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADG 99
Query: 67 FRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVL 126
++ +AA+GM G + G +A + GN +P+R+IP G+VV VE G +
Sbjct: 100 -----ERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQI 154
Query: 127 ARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
AR++G Y +++ D ++L SG + +P CRA G+V + L KAG
Sbjct: 155 ARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAG 209
>TIGR_CMR|CHY_2306 [details] [associations]
symbol:CHY_2306 "ribosomal protein L2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_361115.1 ProteinModelPortal:Q3A9R9 SMR:Q3A9R9
STRING:Q3A9R9 GeneID:3726958 KEGG:chy:CHY_2306 PATRIC:21277683
BioCyc:CHYD246194:GJCN-2305-MONOMER Uniprot:Q3A9R9
Length = 274
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 53/166 (31%), Positives = 78/166 (46%)
Query: 22 HRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAA 79
HR G +R +DF + V I +DP R A +A + + +K IA
Sbjct: 53 HRGGGHKRMYRIIDFKRNKDGIPAKVVAIEYDPNRTARIALLAYADG-----EKRYIIAP 107
Query: 80 EGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISH 139
G+ G + G A + VGN LP+ +IP G +V N+E + G G L RA+G A ++
Sbjct: 108 HGLKVGDVLMSGPDADIKVGNALPLANIPVGTLVHNIELYPGKGGQLVRAAGTAAQLLGK 167
Query: 140 NPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+ ++LPSG + + CRA IGQV + KAG A
Sbjct: 168 --EGRYAILRLPSGEMRKVLLECRATIGQVGNLEHENITIGKAGRA 211
>UNIPROTKB|E9PP36 [details] [associations]
symbol:RPL8 "60S ribosomal protein L8" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 ChiTaRS:RPL8 HGNC:HGNC:10368
EMBL:AF235103 IPI:IPI00792050 ProteinModelPortal:E9PP36 SMR:E9PP36
PRIDE:E9PP36 Ensembl:ENST00000527914 ArrayExpress:E9PP36
Bgee:E9PP36 Uniprot:E9PP36
Length = 148
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKKVISSANR 54
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 155 KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 46 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 89
>UNIPROTKB|K7GST6 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 Gene3D:2.40.50.140
InterPro:IPR012340 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034343 Uniprot:K7GST6
Length = 148
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKKVISSANR 54
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 155 KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
KK+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 46 KKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 89
>TIGR_CMR|DET_0477 [details] [associations]
symbol:DET_0477 "ribosomal protein L2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 RefSeq:YP_181221.1
ProteinModelPortal:Q3Z978 SMR:Q3Z978 STRING:Q3Z978 GeneID:3230152
KEGG:det:DET0477 PATRIC:21608023 BioCyc:DETH243164:GJNF-477-MONOMER
Uniprot:Q3Z978
Length = 274
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/166 (30%), Positives = 81/166 (48%)
Query: 22 HRKGPA--QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAA 79
HR G + Q R +DF + G +A I +DP R A +A V + +K +A
Sbjct: 53 HRGGGSKTQIRVIDFKRNKLDVPGRIAAIEYDPNRTARIALVFYTDG-----EKRYILAP 107
Query: 80 EGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISH 139
+ G + G+ A GN LP+ +IP G + N+E G G++ R++G A +++
Sbjct: 108 SDLKIGDVIMAGENAEPKSGNALPLSAIPTGTFIHNIELIKGRGGIMVRSAGAAAQLMAK 167
Query: 140 NPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+ D V+LPSG + + S C A +GQ+ G E L+ G A
Sbjct: 168 --EGDYALVRLPSGEMRKVRSDCSATVGQI---GNIEHGTLEIGKA 208
>UNIPROTKB|Q9KNY7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 49/158 (31%), Positives = 79/158 (50%)
Query: 29 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV 88
+R +DF + V + +DP R A +A V + ++ IA +G+ G +
Sbjct: 62 YRLVDFKRTKDGIPAKVERLEYDPNRSANIALVLYADG-----ERRYIIAPKGLQAGDVI 116
Query: 89 YCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRV 148
G A + GN +P+R+IP G+ + NVE G LAR++G YA +++ D +
Sbjct: 117 QSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAGAYAQLVAR--DGAYVTL 174
Query: 149 KLPSGA-KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+L SG +K++ G RA IG+V + L KAG A
Sbjct: 175 RLRSGEMRKVLSEG-RATIGEVGNAEHMLRELGKAGAA 211
>TIGR_CMR|VC_2593 [details] [associations]
symbol:VC_2593 "ribosomal protein L2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C82059
RefSeq:NP_232221.1 ProteinModelPortal:Q9KNY7 SMR:Q9KNY7
PRIDE:Q9KNY7 DNASU:2615610 GeneID:2615610 KEGG:vch:VC2593
PATRIC:20084212 Uniprot:Q9KNY7
Length = 274
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 49/158 (31%), Positives = 79/158 (50%)
Query: 29 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV 88
+R +DF + V + +DP R A +A V + ++ IA +G+ G +
Sbjct: 62 YRLVDFKRTKDGIPAKVERLEYDPNRSANIALVLYADG-----ERRYIIAPKGLQAGDVI 116
Query: 89 YCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRV 148
G A + GN +P+R+IP G+ + NVE G LAR++G YA +++ D +
Sbjct: 117 QSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAGAYAQLVAR--DGAYVTL 174
Query: 149 KLPSGA-KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+L SG +K++ G RA IG+V + L KAG A
Sbjct: 175 RLRSGEMRKVLSEG-RATIGEVGNAEHMLRELGKAGAA 211
>TIGR_CMR|SPO_0484 [details] [associations]
symbol:SPO_0484 "ribosomal protein L2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 GO:GO:0016740 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_165746.1
ProteinModelPortal:Q5LW59 SMR:Q5LW59 GeneID:3195307
KEGG:sil:SPO0484 PATRIC:23374229 Uniprot:Q5LW59
Length = 280
Score = 180 (68.4 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 11 GAGSVFKSHTHHRKGPAQ--FRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPF 67
G + + + R G A+ +R +DF +RN + + V I +DP R A +A + +
Sbjct: 42 GRNNTGRITSRRRGGGAKRLYRIVDF-KRNKFDVAATVERIEYDPNRTAFIALIKYEDG- 99
Query: 68 RYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
++ +A + + G V KA + GN +P +P G +V N+E G G +A
Sbjct: 100 ----EQAYILAPQRLAVGDKVVASAKADIKPGNAMPFSGMPIGTIVHNIEMKPGKGGQIA 155
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
RA+G YA + D +++L SG +++ C A +G V+ + + KAG H
Sbjct: 156 RAAGTYAQFVGR--DGGYAQIRLSSGELRMVRQECMATVGAVSNPDNSNQNYGKAGRMRH 213
Query: 188 K 188
K
Sbjct: 214 K 214
>TIGR_CMR|CPS_0870 [details] [associations]
symbol:CPS_0870 "ribosomal protein L2" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:YP_267619.1 ProteinModelPortal:Q487Z6 SMR:Q487Z6
STRING:Q487Z6 PRIDE:Q487Z6 GeneID:3519963 KEGG:cps:CPS_0870
PATRIC:21465033 BioCyc:CPSY167879:GI48-956-MONOMER Uniprot:Q487Z6
Length = 274
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 29 FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV 88
+R +DF + V + +DP R A +A V + ++ +A +G+ G +
Sbjct: 62 YRIVDFKRLKDGIPAKVERLEYDPNRSANIALVLYADG-----ERRYILAPKGLSAGDSI 116
Query: 89 YCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRV 148
G A + GN +P+R+IP G+V+ +E G +ARA+G YA +++ D +
Sbjct: 117 LSGVGAPIKPGNTMPLRNIPLGSVIHAIELKPGKGAQIARAAGTYAQLVAK--DGAYVTL 174
Query: 149 KLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
+L SG + I S CRA +G++ + L KAG
Sbjct: 175 RLRSGEMRKIESDCRATLGEIGNSEHMLRSLGKAG 209
>UNIPROTKB|K7GQ66 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF03947 PROSITE:PS00467 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000034388 Uniprot:K7GQ66
Length = 147
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGR 54
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V ++I R
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIV-KVISSANR 53
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 153 GAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPK 198
G K+I S RA++G VAGGGR +KP+LKAG AYHK++ KRNCWP+
Sbjct: 43 GIVKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPR 88
>TIGR_CMR|NSE_0269 [details] [associations]
symbol:NSE_0269 "ribosomal protein L2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 OMA:LVRQECM RefSeq:YP_506160.1 STRING:Q2GED6
PRIDE:Q2GED6 GeneID:3931693 KEGG:nse:NSE_0269 PATRIC:22680629
BioCyc:NSEN222891:GHFU-296-MONOMER Uniprot:Q2GED6
Length = 279
Score = 177 (67.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 59/181 (32%), Positives = 83/181 (45%)
Query: 9 RKGAGSVFKSHTHHRKGPAQFRSLDFGE-RNG---YLKGVVAEIIHDPGRGAPLARVTFR 64
R AG + H R G ++R + F +G + K VV I +DP R A +A V
Sbjct: 43 RNNAGRITVRHRGGR-GKVRYRLISFSRFSSGAPLFTKAVVERIEYDPNRTAFIALV--- 98
Query: 65 HPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRG 124
F+ IA EG+ + + G +P+ +P G V NVE G G
Sbjct: 99 RDFK-TGLPSYIIAPEGLKKSDVLSTDVFDDMAPGACMPLGKVPLGTTVHNVELKPGAGG 157
Query: 125 VLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGN 184
L R++G A +I+ D + T V LPSG K++I S C A IG V+ R L KAG
Sbjct: 158 QLVRSAGSSARVIAR--DGNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGR 215
Query: 185 A 185
+
Sbjct: 216 S 216
>UNIPROTKB|K7GMQ4 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 Gene3D:2.40.50.140
InterPro:IPR012340 PANTHER:PTHR13691 GeneTree:ENSGT00390000009907
EMBL:CU468612 Ensembl:ENSSSCT00000033716 Uniprot:K7GMQ4
Length = 72
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEI 48
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+GY+KG+V +
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKSL 48
>TIGR_CMR|APH_0283 [details] [associations]
symbol:APH_0283 "ribosomal protein L2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
RefSeq:YP_504895.1 ProteinModelPortal:Q2GL56 SMR:Q2GL56
STRING:Q2GL56 GeneID:3930337 KEGG:aph:APH_0283 PATRIC:20949140
OMA:STIHCIE ProtClustDB:PRK09374 BioCyc:APHA212042:GHPM-313-MONOMER
PANTHER:PTHR13691:SF5 Uniprot:Q2GL56
Length = 276
Score = 175 (66.7 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 55/185 (29%), Positives = 83/185 (44%)
Query: 3 RVIRAQRKGAGSVFKSHTH--HRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLAR 60
RV R G + H HR+ +R +DF + VV + +DP R A LA
Sbjct: 37 RVSSGGRNSRGVITVRHRGGGHRR---LYRVVDFKRNKEGVPAVVKRLEYDPNRTAFLAL 93
Query: 61 VTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHV 120
+ + + +A G+ + G + ++ GN L + IP G V NVE V
Sbjct: 94 IQYEDG-----ELSYILAPSGLKVDDVIMSGAGSDVLPGNCLKLSMIPSGTFVHNVEMKV 148
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
G G++ARA+G YA ++ D ++L SG + I S CRA +G V+ L
Sbjct: 149 GGGGIIARAAGSYAQVMGR--DGAYVMLRLGSGEVRRILSVCRATVGVVSNLDNRNIKLG 206
Query: 181 KAGNA 185
KAG +
Sbjct: 207 KAGRS 211
>TIGR_CMR|CBU_0241 [details] [associations]
symbol:CBU_0241 "ribosomal protein L2" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467
GO:GO:0006412 GO:GO:0016740 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_819285.1 ProteinModelPortal:Q83ES1 SMR:Q83ES1
PRIDE:Q83ES1 GeneID:1208122 KEGG:cbu:CBU_0241 PATRIC:17929175
BioCyc:CBUR227377:GJ7S-247-MONOMER Uniprot:Q83ES1
Length = 275
Score = 173 (66.0 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 50/181 (27%), Positives = 90/181 (49%)
Query: 3 RVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVT 62
R+ +G +V + H++ +R +DF ++G V + +DP R A +A V
Sbjct: 39 RINSRNNQGRITVRRRGGGHKRN---YRIIDFKRDKEGIEGKVERLEYDPNRSAHIALVL 95
Query: 63 FRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGD 122
+ ++ IA +G++ G V G++A + GN LP+++IP GA + N+E G
Sbjct: 96 YPDG-----ERRYIIAPKGVHKGSKVVSGREAPIRPGNCLPLQNIPLGATIHNIELKPGK 150
Query: 123 RGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKA 182
L R++G A + + + +++ SG + I + CRA IG+V+ + L KA
Sbjct: 151 GAQLVRSAGASAQLAAK--EGIYAIIRMRSGETRKILAVCRACIGEVSNSEHNLRSLGKA 208
Query: 183 G 183
G
Sbjct: 209 G 209
>UNIPROTKB|P95052 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0005886 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0016740 EMBL:BX842574 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 OMA:STIHCIE
ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5 PIR:C70642
RefSeq:NP_215218.1 RefSeq:NP_335148.1 RefSeq:YP_006514048.1
ProteinModelPortal:P95052 SMR:P95052 PRIDE:P95052
EnsemblBacteria:EBMYCT00000002534 EnsemblBacteria:EBMYCT00000069561
GeneID:13318593 GeneID:888341 GeneID:926021 KEGG:mtc:MT0731
KEGG:mtu:Rv0704 KEGG:mtv:RVBD_0704 PATRIC:18123339
TubercuList:Rv0704 Uniprot:P95052
Length = 280
Score = 170 (64.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 55/182 (30%), Positives = 87/182 (47%)
Query: 9 RKGAGSVFKSHTHHRKGPAQ--FRSLDF--GERNGYLKGVVAEIIHDPGRGAPLARVTFR 64
R G + + T H+ G + +R +DF +++G + VA I +DP R AR+
Sbjct: 40 RGGRNAHGRITTRHKGGGHKRAYRMIDFRRNDKDG-VNAKVAHIEYDPNR---TARIALL 95
Query: 65 HPFRYMK-QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDR 123
H Y+ +K IA G+ G V G A + GN LP+R+IP G ++ VE G
Sbjct: 96 H---YLDGEKRYIIAPNGLSQGDVVESGANADIKPGNNLPLRNIPAGTLIHAVELRPGGG 152
Query: 124 GVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
LAR++G ++ + R +PSG + + CRA +G+V G E+ + G
Sbjct: 153 AKLARSAGSSIQLLGKEASYASLR--MPSGEIRRVDVRCRATVGEV---GNAEQANINWG 207
Query: 184 NA 185
A
Sbjct: 208 KA 209
>UNIPROTKB|P0C8K6 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:4530 "Oryza sativa" [GO:0005739 "mitochondrion"
evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167807 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_002000581.1
ProteinModelPortal:P0C8K6 PRIDE:P0C8K6 GeneID:6450181
KEGG:osa:6450181 Gramene:P0C8K6 HOGENOM:HOG000150660
Genevestigator:P0C8K6 Uniprot:P0C8K6
Length = 502
Score = 150 (57.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 38/88 (43%), Positives = 50/88 (56%)
Query: 98 VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKI 157
VGN +P+ I G V ++E H G LARA+G YA II P + V+LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 IPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
I S CRA IG V+ + L KAG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS 445
Score = 46 (21.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPAQF--RSLDFGERNGYLKGVVAEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G+V I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>UNIPROTKB|P92812 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:BA000029
GenomeReviews:BA000029_GR EMBL:DQ167400 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 RefSeq:YP_002000581.1 GeneID:6450181
KEGG:osa:6450181 EMBL:D78336 PIR:T03019 ProteinModelPortal:P92812
STRING:P92812 PRIDE:P92812 Gramene:P92812 Uniprot:P92812
Length = 502
Score = 150 (57.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 38/88 (43%), Positives = 50/88 (56%)
Query: 98 VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKI 157
VGN +P+ I G V ++E H G LARA+G YA II P + V+LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 IPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
I S CRA IG V+ + L KAG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS 445
Score = 46 (21.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPAQF--RSLDFGERNGYLKGVVAEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G+V I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>UNIPROTKB|Q2F969 [details] [associations]
symbol:RPL2 "60S ribosomal protein L2, mitochondrial"
species:39946 "Oryza sativa Indica Group" [GO:0005739
"mitochondrion" evidence=IC] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:DQ167399 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 RefSeq:YP_514664.1
ProteinModelPortal:Q2F969 PRIDE:Q2F969 GeneID:3950683
Gramene:Q2F969 Uniprot:Q2F969
Length = 502
Score = 150 (57.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 38/88 (43%), Positives = 50/88 (56%)
Query: 98 VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKI 157
VGN +P+ I G V ++E H G LARA+G YA II P + V+LPSG +K+
Sbjct: 360 VGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKE-PASQCL-VRLPSGVEKL 417
Query: 158 IPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
I S CRA IG V+ + L KAG +
Sbjct: 418 IDSRCRATIGIVSNPNHGARKLRKAGQS 445
Score = 46 (21.3 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 11 GAGSVFKSHTHHRKGPAQF--RSLDFGERNGYLKGVVAEIIHDPGRGAPLARV 61
G S + HR G ++ R +D +R+ G+V I +DP R + +A V
Sbjct: 22 GRNSSGRITVFHRGGGSKRLQRKIDL-KRSTSSIGIVERIEYDPNRSSRIALV 73
>TIGR_CMR|CJE_1872 [details] [associations]
symbol:CJE_1872 "ribosomal protein L2" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158
PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 HAMAP:MF_01320_B
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886 ProtClustDB:PRK09374
PANTHER:PTHR13691:SF5 RefSeq:YP_179842.1 ProteinModelPortal:Q5HS93
SMR:Q5HS93 STRING:Q5HS93 GeneID:3232499 KEGG:cjr:CJE1872
PATRIC:20045576 OMA:LVRQECM BioCyc:CJEJ195099:GJC0-1911-MONOMER
Uniprot:Q5HS93
Length = 276
Score = 159 (61.0 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 46/181 (25%), Positives = 84/181 (46%)
Query: 11 GAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFR 68
G S + + H++ A+ +R +DF R ++G V I +DP R +A + ++
Sbjct: 42 GRNSYGRITSRHKEAGAKKLYRIIDFKRRKFGIEGKVEAIEYDPYRNCRIALIAYKDG-- 99
Query: 69 YMKQKELFIAAEGMYTGQFVYCGKKAT-LMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLA 127
+K + G+ G V + + GN + +++IP G +V NVE G G +
Sbjct: 100 ---EKRYILQPRGLSVGDIVAAAESGLDIKPGNAMKLKNIPVGTIVHNVELKPGKGGQMI 156
Query: 128 RASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH 187
R++G YA ++ + ++L SG + + + C A IG+V + KAG H
Sbjct: 157 RSAGAYAQLMGK--EEKYVILRLASGEMRQVLAECMASIGEVGNEEWANVTIGKAGRNRH 214
Query: 188 K 188
+
Sbjct: 215 R 215
>UNIPROTKB|F1NY85 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 PIRSF:PIRSF002158 GO:GO:0005739
GO:GO:0006412 GO:GO:0016740 GO:GO:0003723 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 OMA:LVRQECM
GeneTree:ENSGT00390000000189 EMBL:AADN02044222 IPI:IPI00579337
Ensembl:ENSGALT00000013999 Uniprot:F1NY85
Length = 259
Score = 157 (60.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/177 (29%), Positives = 83/177 (46%)
Query: 28 QFRSLDFGERNGYLKGV--VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTG 85
++R +DF +R Y +G V + +DP R A +A V + QK IA E M G
Sbjct: 62 RYRMIDF-QRLRYNEGTEKVIAVRYDPCRSADIALVAGGN------QKRWIIATENMQPG 114
Query: 86 QFV----YCGKKATLM-VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHN 140
+ + G+ A L G+ P+ ++P G ++CN+E H G RA+G V++
Sbjct: 115 DLIKNSSHIGRMAVLANEGDAYPLGALPVGTLICNLESHPGKGAQYIRAAGTCGVLL--R 172
Query: 141 PDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCW 196
N T V+LPS + C A +G+V+ ++ + KAG N + R W
Sbjct: 173 KVNGTAIVQLPSKRHMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPHTGLW 229
>UNIPROTKB|Q9L0D7 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:100226
"Streptomyces coelicolor A3(2)" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 EMBL:AL939121 GenomeReviews:AL645882_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090 KO:K02886
OMA:STIHCIE ProtClustDB:PRK09374 PANTHER:PTHR13691:SF5
RefSeq:NP_628864.1 ProteinModelPortal:Q9L0D7 SMR:Q9L0D7
PhosSite:P11111097 GeneID:1100146 KEGG:sco:SCO4705 PATRIC:23739232
Uniprot:Q9L0D7
Length = 278
Score = 147 (56.8 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 9 RKGAGSVFKSHTH--HRKGPAQFRSLDFG--ERNGYLKGVVAEIIHDPGRGAPLARVTFR 64
R AG V H H++ +R +DF +++G + VA I +DP R AR+
Sbjct: 43 RNNAGRVTVRHQGGGHKRA---YRVIDFRRHDKDG-VPAKVAHIEYDPNR---TARIALL 95
Query: 65 HPFRYMK-QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDR 123
H Y +K +A + G V G A + GN L +R+IP G + +E G
Sbjct: 96 H---YADGEKRYILAPRNLQQGDRVENGPGADIKPGNNLALRNIPVGTTIHAIELRPGGG 152
Query: 124 GVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
AR++G +++ + +++PSG +++ CRA +G+V G E+ + G
Sbjct: 153 AKFARSAGASVQLLAK--EGTMAHLRMPSGEIRLVDQRCRATVGEV---GNAEQSNINWG 207
Query: 184 NAYHK 188
A K
Sbjct: 208 KAGRK 212
>UNIPROTKB|K7GL68 [details] [associations]
symbol:RPL8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002171 PANTHER:PTHR13691
GeneTree:ENSGT00390000009907 EMBL:CU468612
Ensembl:ENSSSCT00000033747 Uniprot:K7GL68
Length = 38
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERN 38
MGRVIR QRKGAGSVF++H HRKG A+ R++DF ER+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERH 38
>CGD|CAL0005205 [details] [associations]
symbol:orf19.5420 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947 PROSITE:PS00467
CGD:CAL0005205 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AACQ01000051
EMBL:AACQ01000050 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 TIGRFAMs:TIGR01171 eggNOG:COG0090
PANTHER:PTHR13691:SF5 RefSeq:XP_717698.1 RefSeq:XP_717792.1
STRING:Q5A7P6 GeneID:3640548 GeneID:3640641 KEGG:cal:CaO19.12875
KEGG:cal:CaO19.5420 Uniprot:Q5A7P6
Length = 368
Score = 145 (56.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 96 LMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAK 155
L GN LP+R +P G+++ N+ GDR L R++G + I+S +P+ + +KL SG +
Sbjct: 210 LQRGNCLPLRMLPVGSIIHNIGLRPGDRAQLVRSAGTFGKILSKHPEKNRAVIKLSSGEQ 269
Query: 156 KIIPSGCRAMIGQVAGGGRTEKPLLKAGNA-YHKFRVK 192
+ + C A +G V+ KAG + Y FR K
Sbjct: 270 RYVILDCHATLGVVSNKEHQLISWGKAGRSRYRGFRPK 307
>UNIPROTKB|Q9AMK8 [details] [associations]
symbol:rplB "50S ribosomal protein L2" species:42684
"Streptomyces collinus" [GO:0003735 "structural constituent of
ribosome" evidence=IDA] [GO:0006412 "translation" evidence=IDA]
[GO:0015934 "large ribosomal subunit" evidence=IDA]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 GO:GO:0006412 GO:GO:0016740
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
HAMAP:MF_01320_B InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 PANTHER:PTHR13691:SF5 EMBL:AF324467
ProteinModelPortal:Q9AMK8 SMR:Q9AMK8 Uniprot:Q9AMK8
Length = 278
Score = 142 (55.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 9 RKGAGSVFKSHTH--HRKGPAQFRSLDFG--ERNGYLKGVVAEIIHDPGRGAPLARVTFR 64
R AG + H H++ +R +DF +++G + VA I +DP R A R+
Sbjct: 43 RNNAGRITVRHQGGGHKRA---YRIVDFRRHDKDG-VPAKVAHIEYDPNRSA---RIALL 95
Query: 65 HPFRYMK-QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDR 123
H Y +K +A + G V G A + GN L +R+IP G + +E G
Sbjct: 96 H---YADGEKRYILAPRNLQQGDRVENGPGADIKPGNNLALRNIPVGTTIHAIELRPGGG 152
Query: 124 GVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
AR++G +++ + +++PSG +++ CRA IG+V G E+ + G
Sbjct: 153 AKFARSAGASVQLLAK--EGAYAHLRMPSGEIRLVNVRCRATIGEV---GNAEQSNINWG 207
Query: 184 NAYHK 188
A K
Sbjct: 208 KAGRK 212
>TAIR|locus:505006316 [details] [associations]
symbol:AT2G44065 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR002171 InterPro:IPR022669 InterPro:IPR022671
Pfam:PF03947 PIRSF:PIRSF002158 PROSITE:PS00467 EMBL:CP002685
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC004005
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 HSSP:P04257 EMBL:AY063831 EMBL:AY091281
IPI:IPI00538697 RefSeq:NP_566007.1 RefSeq:NP_973685.1
UniGene:At.175 ProteinModelPortal:Q8VZU4 SMR:Q8VZU4 IntAct:Q8VZU4
STRING:Q8VZU4 PRIDE:Q8VZU4 EnsemblPlants:AT2G44065.1
EnsemblPlants:AT2G44065.2 GeneID:819012 KEGG:ath:AT2G44065
TAIR:At2g44065 InParanoid:Q8VZU4 OMA:NIEMNPG PhylomeDB:Q8VZU4
ProtClustDB:CLSN2688921 ArrayExpress:Q8VZU4 Genevestigator:Q8VZU4
Uniprot:Q8VZU4
Length = 214
Score = 130 (50.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 97 MVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKK 156
M+G+ +P+ + G ++ N+E + G + RA+G A I+ P +KLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKE-PAKGKCLIKLPSGDTK 116
Query: 157 IIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
I + CRA IG V+ K L KAG +
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQS 145
>SGD|S000000776 [details] [associations]
symbol:RML2 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=TAS]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0006631
"fatty acid metabolic process" evidence=IMP] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR002171 InterPro:IPR005880 InterPro:IPR022666
InterPro:IPR022669 InterPro:IPR022671 Pfam:PF00181 Pfam:PF03947
PROSITE:PS00467 SGD:S000000776 GO:GO:0016740 GO:GO:0006631
GO:GO:0003723 EMBL:BK006939 GO:GO:0005762 GO:GO:0003735 EMBL:U18779
GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 RefSeq:NP_010867.3 GeneID:856664 KEGG:sce:YEL047C
RefSeq:NP_010864.3 GeneID:856660 KEGG:sce:YEL050C
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
TIGRFAMs:TIGR01171 HOGENOM:HOG000232982 eggNOG:COG0090
PANTHER:PTHR13691:SF5 GeneTree:ENSGT00390000000189
OrthoDB:EOG4W9NCQ PIR:S30827 ProteinModelPortal:P32611 SMR:P32611
DIP:DIP-6812N IntAct:P32611 MINT:MINT-615808 STRING:P32611
PaxDb:P32611 PeptideAtlas:P32611 EnsemblFungi:YEL050C CYGD:YEL050c
OMA:QRGNCLP NextBio:982655 Genevestigator:P32611 GermOnline:YEL050C
Uniprot:P32611
Length = 393
Score = 106 (42.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 95 TLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGA 154
T GN LP+ IP G ++ NV G R++G YA +++ P+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 155 KKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
+ + A IG V+ + L KAG +
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKAGRS 324
Score = 59 (25.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 4 VIRAQRKGAGSVFKSHTHHRKGPAQFRS--LDFGERNGYLKGVVAEIIHDPGRGAPLARV 61
V+R + G + K H+ G + R+ +DF G + V I +DPGR + +A +
Sbjct: 125 VVRKKHGGRNNSGKITVRHQGGGHRNRTRLIDFNRWEGGAQ-TVQRIEYDPGRSSHIALL 183
Query: 62 TFRHPFRYMKQKELFIAAEGMYTGQFV 88
+H + IA +G+ G V
Sbjct: 184 --KH--NTTGELSYIIACDGLRPGDVV 206
>ASPGD|ASPL0000011317 [details] [associations]
symbol:AN3649 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006631
"fatty acid metabolic process" evidence=IEA] InterPro:IPR002171
InterPro:IPR005880 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000061 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015934 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
HOGENOM:HOG000232982 eggNOG:COG0090 PANTHER:PTHR13691:SF5
OrthoDB:EOG4W9NCQ OMA:QRGNCLP RefSeq:XP_661253.1 STRING:Q5B731
EnsemblFungi:CADANIAT00005086 GeneID:2873068 KEGG:ani:AN3649.2
Uniprot:Q5B731
Length = 405
Score = 83 (34.3 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 99 GNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIIS 138
GN LP+ +P G+++ NV G G L R++G +A +IS
Sbjct: 212 GNCLPLHMVPVGSLIFNVGLRPGGGGQLCRSAGTFATVIS 251
Score = 70 (29.7 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 9 RKGAGSVFKSHTHHRKG-PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPF 67
R +G V + HH G + R +DF +R+ +V I HDPGR A +A + +
Sbjct: 107 RNNSGRV--TVRHHGGGHKRRIRMVDF-KRDAPGPHIVERIEHDPGRSAHIALLRSKETG 163
Query: 68 RYMKQKELFIAAEGMYTGQFV 88
+ +AA+GM G V
Sbjct: 164 KL----SYILAADGMRAGDVV 180
Score = 49 (22.3 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 148 VKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNA 185
++L SG ++I C A IG + + L KAG +
Sbjct: 294 IRLSSGEVRLIHKDCCATIGVASNPNKKYAQLGKAGRS 331
>RGD|1307147 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 45 VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV----YCGKKATL-MVG 99
V + +DP R A +A V +K IA E M G + + G+ A G
Sbjct: 125 VVVVRYDPCRSADIALVAGG------SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEG 178
Query: 100 NVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIP 159
+ P+ ++P G ++ NVE G RA+G V++ N T ++LPS + +
Sbjct: 179 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 236
Query: 160 SGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPK 198
C A +G+V+ ++ + KAG N + R W +
Sbjct: 237 ESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQR 276
>UNIPROTKB|Q498T4 [details] [associations]
symbol:Mrpl2 "39S ribosomal protein L2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 RGD:1307147
GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF EMBL:BC100081 IPI:IPI00190153
RefSeq:NP_001029308.1 UniGene:Rn.102111 ProteinModelPortal:Q498T4
STRING:Q498T4 PRIDE:Q498T4 GeneID:301240 KEGG:rno:301240
UCSC:RGD:1307147 NextBio:648365 ArrayExpress:Q498T4
Genevestigator:Q498T4 GermOnline:ENSRNOG00000018057 Uniprot:Q498T4
Length = 304
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 45 VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV----YCGKKATL-MVG 99
V + +DP R A +A V +K IA E M G + + G+ A G
Sbjct: 125 VVVVRYDPCRSADIALVAGG------SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEG 178
Query: 100 NVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIP 159
+ P+ ++P G ++ NVE G RA+G V++ N T ++LPS + +
Sbjct: 179 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 236
Query: 160 SGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPK 198
C A +G+V+ ++ + KAG N + R W +
Sbjct: 237 ESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQR 276
>MGI|MGI:1351622 [details] [associations]
symbol:Mrpl2 "mitochondrial ribosomal protein L2"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 MGI:MGI:1351622 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 eggNOG:COG0090 CTD:51069
GeneTree:ENSGT00390000000189 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OMA:GNRPRSG OrthoDB:EOG4H19WF HSSP:P04257
EMBL:AK009521 EMBL:BC027762 IPI:IPI00109740 RefSeq:NP_079578.1
UniGene:Mm.391007 ProteinModelPortal:Q9D773 SMR:Q9D773
STRING:Q9D773 PhosphoSite:Q9D773 PaxDb:Q9D773 PRIDE:Q9D773
Ensembl:ENSMUST00000002844 GeneID:27398 KEGG:mmu:27398
InParanoid:Q9D773 NextBio:305380 Bgee:Q9D773 CleanEx:MM_MRPL2
Genevestigator:Q9D773 GermOnline:ENSMUSG00000002767 Uniprot:Q9D773
Length = 306
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 42/160 (26%), Positives = 70/160 (43%)
Query: 45 VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV----YCGKKATL-MVG 99
V + +DP R A +A V +K IA E M G + + G+ A G
Sbjct: 127 VVVVRYDPCRSADIALVAGG------SRKRWIIATENMKAGDTILNSNHIGRMAVAAQEG 180
Query: 100 NVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIP 159
+ P+ ++P G ++ NVE G RA+G V++ N T ++LPS + +
Sbjct: 181 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 238
Query: 160 SGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPK 198
C A +G+V+ ++ + KAG N + R W +
Sbjct: 239 ESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQR 278
>DICTYBASE|DDB_G0294036 [details] [associations]
symbol:mrpl2 "ribosomal protein L2, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0016740 "transferase
activity" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002171 InterPro:IPR005880
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
PIRSF:PIRSF002158 PROSITE:PS00467 dictyBase:DDB_G0294036
GO:GO:0005739 GO:GO:0006412 GO:GO:0016740 GO:GO:0003723
GO:GO:0003735 EMBL:AB000109 GenomeReviews:AB000109_GR
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:D21196
GO:GO:0015934 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 Gene3D:4.10.950.10
InterPro:IPR014726 PANTHER:PTHR13691 TIGRFAMs:TIGR01171
eggNOG:COG0090 PANTHER:PTHR13691:SF5 PIR:T43770 RefSeq:NP_050091.1
HSSP:P04257 ProteinModelPortal:Q23888 STRING:Q23888 GeneID:2193919
KEGG:ddi:DidioMp24 Uniprot:Q23888
Length = 266
Score = 117 (46.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/140 (29%), Positives = 64/140 (45%)
Query: 45 VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCG--KKATLMVGNVL 102
V I +DP R A +A + Y I+ + G + K TL VGN
Sbjct: 57 VMRIEYDPNRSAHIALCSILKEGIYF----YVISIAKLEVGSLIITSALKLGTLQVGNTT 112
Query: 103 PVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGC 162
+++IPEG ++ N+E ++RA+G ++II + + VKL S ++I + C
Sbjct: 113 KIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKY-NKKYSLVKLSSKECRLISNEC 171
Query: 163 RAMIGQVAGGGRTEKPLLKA 182
A IG V+ R K KA
Sbjct: 172 YATIGTVSNIERKLKQNKKA 191
>ZFIN|ZDB-GENE-050809-12 [details] [associations]
symbol:im:6908224 "im:6908224" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 ZFIN:ZDB-GENE-050809-12 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR13691
GeneTree:ENSGT00390000000189 EMBL:CABZ01079772 IPI:IPI00992922
Ensembl:ENSDART00000090644 Bgee:E7F8R3 Uniprot:E7F8R3
Length = 294
Score = 117 (46.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 6 RAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRH 65
R + G G K HR Q + G+ + V E+ +DP R A +A V +
Sbjct: 78 RIKTHGIGGGHKQR--HRIIDFQRLRSEPGKEQPVMVEKVLEVRYDPCRSADIALVAGGN 135
Query: 66 PFRYMKQKELFIAAEGMYTGQFVY-C---GKKATL-MVGNVLPVRSIPEGAVVCNVEHHV 120
+K IA++ M G + C G+ A L G+ PV ++P G ++ N+E
Sbjct: 136 ------RKRWIIASQNMEAGDLIQSCRGIGRMAVLAQEGDAHPVGALPVGTLIHNLELFP 189
Query: 121 GDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLL 180
G RA+G V++ + T ++LPS + + C A +G+V+ ++ +
Sbjct: 190 GRGAQYIRAAGTCGVLL--RKVSGTAIIQLPSKHQIQVLETCVATVGRVSNVDHNKRIIG 247
Query: 181 KAG-NAYHKFRVKRNCWPK 198
KAG N + R W +
Sbjct: 248 KAGTNRWLGIRPSSGRWQR 266
>UNIPROTKB|Q5T653 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL355385 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 OMA:LVRQECM CTD:51069 HOGENOM:HOG000046229
HOVERGEN:HBG057412 OrthoDB:EOG4H19WF HSSP:P04257 EMBL:AF132956
EMBL:AK314948 EMBL:BC013685 EMBL:BC020212 EMBL:AB051617
IPI:IPI00411816 RefSeq:NP_057034.2 UniGene:Hs.55041
ProteinModelPortal:Q5T653 SMR:Q5T653 IntAct:Q5T653
MINT:MINT-6492891 STRING:Q5T653 PhosphoSite:Q5T653 DMDM:118573672
PaxDb:Q5T653 PRIDE:Q5T653 DNASU:51069 Ensembl:ENST00000388752
GeneID:51069 KEGG:hsa:51069 UCSC:uc003ots.1 GeneCards:GC06M043068
HGNC:HGNC:14056 HPA:HPA007455 MIM:611822 neXtProt:NX_Q5T653
PharmGKB:PA30949 InParanoid:Q5T653 GenomeRNAi:51069 NextBio:53675
ArrayExpress:Q5T653 Bgee:Q5T653 CleanEx:HS_MRPL2
Genevestigator:Q5T653 GermOnline:ENSG00000112651 Uniprot:Q5T653
Length = 305
Score = 117 (46.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 37 RNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV----YCGK 92
++G + V ++ +DP R A +A V +K IA E M G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALVAGG------SRKRWIIATENMQAGDTILNSNHIGR 171
Query: 93 KATLM-VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLP 151
A G+ P+ ++P G ++ NVE G RA+G V++ N T ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 152 SGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG 183
S + + C A +G+V+ ++ + KAG
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAG 261
>UNIPROTKB|E2RCD7 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002171
InterPro:IPR022666 InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691 CTD:51069
GeneTree:ENSGT00390000000189 OMA:GNRPRSG EMBL:AAEX03008332
RefSeq:XP_532143.2 Ensembl:ENSCAFT00000002798 GeneID:474908
KEGG:cfa:474908 Uniprot:E2RCD7
Length = 306
Score = 116 (45.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 44/175 (25%), Positives = 76/175 (43%)
Query: 28 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQF 87
+FR + + G + V + +DP R A +A V +K +A E M G
Sbjct: 111 RFRP-ELETKPGPFEEKVIMVRYDPCRSADIALVAGG------SRKRWIVATENMQAGDI 163
Query: 88 V----YCGKKATLM-VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPD 142
+ + G+ A G+ P+ ++P G ++ NVE G RA+G V++
Sbjct: 164 ILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 221
Query: 143 NDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCW 196
N T ++LPS + + C A +G+V+ ++ + KAG N + R W
Sbjct: 222 NGTAIIQLPSKRQMQVLETCMATVGRVSNVDHNKRVIGKAGRNRWLGKRPSSGLW 276
>UNIPROTKB|F1RRN2 [details] [associations]
symbol:MRPL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR002171 InterPro:IPR022666 InterPro:IPR022669
Pfam:PF00181 Pfam:PF03947 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 Gene3D:4.10.950.10 InterPro:IPR014726
PANTHER:PTHR13691 CTD:51069 GeneTree:ENSGT00390000000189
OMA:GNRPRSG EMBL:CR956433 RefSeq:NP_001171996.1 UniGene:Ssc.21783
Ensembl:ENSSSCT00000001849 GeneID:100151914 KEGG:ssc:100151914
Uniprot:F1RRN2
Length = 306
Score = 116 (45.9 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 46/177 (25%), Positives = 78/177 (44%)
Query: 28 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQF 87
+FR + + G + V + +DP R A +A V + +K IA E M G
Sbjct: 111 RFRP-EHESKPGPFEEKVIAVRYDPCRSADIALVAGGN------RKRWIIATENMKAGDT 163
Query: 88 V----YCGKKATLM-VGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPD 142
V + G+ A G+ P+ ++P G ++ NVE G RA+G V++
Sbjct: 164 VLNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKV 221
Query: 143 NDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPK 198
N T ++LPS + + C A +G+V+ ++ + KAG N + R W +
Sbjct: 222 NGTAIIQLPSKRQMQVLETCIATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGLWQR 278
>UNIPROTKB|Q2TA12 [details] [associations]
symbol:MRPL2 "39S ribosomal protein L2, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR008991 SUPFAM:SSF50104
Gene3D:4.10.950.10 InterPro:IPR014726 PANTHER:PTHR13691
eggNOG:COG0090 PDB:2FTC PDBsum:2FTC EMBL:BC111173 IPI:IPI00760520
RefSeq:NP_001035617.2 UniGene:Bt.9362 ProteinModelPortal:Q2TA12
STRING:Q2TA12 PRIDE:Q2TA12 Ensembl:ENSBTAT00000016951 GeneID:514403
KEGG:bta:514403 CTD:51069 GeneTree:ENSGT00390000000189
HOGENOM:HOG000046229 HOVERGEN:HBG057412 InParanoid:Q2TA12
OMA:GNRPRSG OrthoDB:EOG4H19WF EvolutionaryTrace:Q2TA12
NextBio:20871316 Uniprot:Q2TA12
Length = 306
Score = 112 (44.5 bits), Expect = 0.00021, P = 0.00021
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 45 VAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFV----YCGKKATLM-VG 99
V + +DP R A +A V + +K IA E M G + + G+ A G
Sbjct: 127 VIVVRYDPCRSADIALVAGGN------RKRWIIATENMKAGDTILNSDHIGRMAVAAREG 180
Query: 100 NVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIP 159
+ P+ ++P G ++ NVE G RA+G V++ N T ++LPS + +
Sbjct: 181 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 238
Query: 160 SGCRAMIGQVAGGGRTEKPLLKAG 183
C A +G+V+ ++ + KAG
Sbjct: 239 ETCTATVGRVSNVDHNKRVIGKAG 262
>WB|WBGene00018932 [details] [associations]
symbol:mrpl-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040039 "inductive
cell migration" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] InterPro:IPR002171 InterPro:IPR022666
InterPro:IPR022669 Pfam:PF00181 Pfam:PF03947 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0032940
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0040039
GO:GO:0040015 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR13691 eggNOG:COG0090
GeneTree:ENSGT00390000000189 HOGENOM:HOG000046229 OMA:GNRPRSG
HSSP:P04257 EMBL:FO081484 PIR:A88633 RefSeq:NP_499987.2
ProteinModelPortal:O45110 SMR:O45110 STRING:O45110 PaxDb:O45110
EnsemblMetazoa:F56B3.8 GeneID:176903 KEGG:cel:CELE_F56B3.8
UCSC:F56B3.8 CTD:176903 WormBase:F56B3.8 InParanoid:O45110
NextBio:894522 Uniprot:O45110
Length = 321
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 46/173 (26%), Positives = 75/173 (43%)
Query: 2 GRVIRAQRKGAGSVFKSHT--HHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLA 59
GR + Q G G F HR+GPA + + ER + EI DP R +A
Sbjct: 71 GRKVN-QHIGGGVKFDYFMIDFHRRGPAD-QGATYDER-------ILEIRRDPNRTCHIA 121
Query: 60 RVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMV-GNVLPVRSIPEGAVVCNVEH 118
+ R++ E A + + T + + + V GN P+ S+ G V+ ++E
Sbjct: 122 LCAGINGKRWILATENMKAGDVISTSG--HLSENPVIGVEGNAYPIGSLAAGTVINSIER 179
Query: 119 H-VGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVA 170
+ D +A+G A I+ H D T VKLP + + C A +G+++
Sbjct: 180 YPTMDSETFVKAAGTSATIVRHQ--GDFTVVKLPHKHEFSLHRTCMATVGRLS 230
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 198 0.00083 111 3 11 22 0.44 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 81
No. of states in DFA: 596 (63 KB)
Total size of DFA: 162 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.00u 0.09s 17.09t Elapsed: 00:00:01
Total cpu time: 17.01u 0.09s 17.10t Elapsed: 00:00:01
Start: Sat May 11 13:20:35 2013 End: Sat May 11 13:20:36 2013