BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037431
(93 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 5 QASSLCIAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLID-EDLRSITAS 63
++ +L I V+GA+G+LA++K F ALF LY +G LP + I+ Y+R + D E + T +
Sbjct: 51 RSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARSTMEDVEKWKKDTLA 110
Query: 64 VLSCRID 70
R+D
Sbjct: 111 GFFTRLD 117
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate
Dehydrogenase (Variant Canton R459l) Complexed With
Structural Nadp+
Length = 514
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 4 NQASSLCIAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLR 58
+Q+ + ++GA+G+LA++KI+ ++ L+ G LPEN IV Y+R L D+R
Sbjct: 26 HQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIR 80
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose
6- Phosphate Dehydrogenase Complexed With Structural
And Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate
Dehydrogenase (Deletion Variant) Complexed With
Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate
Dehydrogenase (Deletion Variant) Complexed With
Glucose-6-Phosphate
Length = 489
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 5 QASSLCIAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLR 58
Q+ + ++GA+G+LA++KI+ ++ L+ G LPEN IV Y+R L D+R
Sbjct: 2 QSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIR 55
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1E7Y|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides Complexed
With Substrate And Nadph
Length = 485
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 11 IAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLRSI 60
+ G TG+LA+RK++ ++F LY G+L ++ IV +R+ L D++ + +
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL 57
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
pdb|1DPG|B Chain B, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
Length = 485
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 11 IAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLRSI 60
+ G TG+LA+RK++ ++F LY G+L ++ IV +R+ L D++ + +
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL 57
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides With Nadp+
Length = 485
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 11 IAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLRSI 60
+ G TG+LA+RK++ ++F LY G+L ++ IV +R+ L D++ + +
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL 57
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides With Substrate
pdb|1H9A|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose
6-Phosphate Dehydrogenase From L. Mesenteroides With
Coenzyme Nadp
pdb|1H9B|A Chain A, Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
Length = 485
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 11 IAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLRSI 60
+ G TG+LA+RK++ ++F LY G+L ++ IV +R+ L D++ + +
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL 57
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1H94|A Chain A, Complex Of Active Mutant (S215->c) Of Glucose
6-Phosphate Dehydrogenase From L.Mesenteroides With
Coenzyme Nad
Length = 485
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 11 IAVIGATGELARRKIFQALFALYYSGFLPENAGIVSYSRKNLIDEDLRSI 60
+ G TG+LA+RK++ ++F LY G+L ++ IV +R+ L D++ + +
Sbjct: 8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQL 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.136 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,278,021
Number of Sequences: 62578
Number of extensions: 70898
Number of successful extensions: 218
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 210
Number of HSP's gapped (non-prelim): 8
length of query: 93
length of database: 14,973,337
effective HSP length: 60
effective length of query: 33
effective length of database: 11,218,657
effective search space: 370215681
effective search space used: 370215681
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)