BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037435
(583 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHS0|CAP10_ARATH Putative clathrin assembly protein At5g35200 OS=Arabidopsis
thaliana GN=At5g35200 PE=1 SV=1
Length = 544
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/532 (48%), Positives = 345/532 (64%), Gaps = 46/532 (8%)
Query: 11 IRKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRA 70
+R+ + A+KDTT V L +NS+ K LDIAIVKATNH E KE++I I A+ A+RPRA
Sbjct: 11 LRRYLGAIKDTTTVSLAKVNSDYKELDIAIVKATNHVERPSKERYIRAIFMAISATRPRA 70
Query: 71 DVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHF 130
DVAYCI +LA+RL++TH+W VALKTLIVIHRALREVD +F EE+INYSR R+ M N+SHF
Sbjct: 71 DVAYCIHALARRLSRTHNWAVALKTLIVIHRALREVDQTFHEEVINYSRSRSHMLNMSHF 130
Query: 131 RDESSPVAWDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSIPDLLDQLPSLQQ 190
+D+S P AW +SAW+R YAL+LEER+ECFR+L+YDVE + L PDLL+QLP+LQ+
Sbjct: 131 KDDSGPNAWAYSAWVRFYALFLEERLECFRVLKYDVEVDPPRTKDLDTPDLLEQLPALQE 190
Query: 191 LLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRT 250
LLFR+L C+P+GAA+ N++I ALS++ SES K+Y ++TDGI LVDK+F+M R+DAV+
Sbjct: 191 LLFRVLDCQPEGAAVQNHIIQLALSMVISESTKIYQALTDGIDNLVDKFFDMQRNDAVKA 250
Query: 251 LEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYVKVAPHIFMLQ 310
L++YR++ QA L+ FE+C+ ++ GRG+++IKIE+PP SF+ AME+YVK AP
Sbjct: 251 LDMYRRAVKQAGRLSEFFEVCKSVNVGRGERFIKIEQPPTSFLQAMEEYVKEAP------ 304
Query: 311 CTAFSPDFSKTKRCNGDQNVARIEAPKLDDAPGANVSTDRQDSDQPGAAPEPASNDRREA 370
+Q V ++ APK + + ++ A+PEP + +
Sbjct: 305 ---------LAAGVKKEQVVEKLTAPK--EILAIEYEIPPKVVEEKPASPEPVKAEAEKP 353
Query: 371 VATQQLIDTEDTQQRTDQSEAAASQQITDLLGLEELTQQVSEMDEKNSLALAIV-TSENQ 429
V Q DLL +++ VSE++EKN+LALAIV S Q
Sbjct: 354 VEKQ-----------------------PDLLSMDDPAPMVSELEEKNALALAIVPVSVEQ 390
Query: 430 PNSENSFTMACQTMSWELALVTAPSSNVAAVAGSKLAGGLDKLTLDSLYDDAIARNAKRN 489
P+S FT T WELALVTAPSSN A A SKLAGGLDKLTLDSLY+DAI + ++N
Sbjct: 391 PHSTTDFTNGNST-GWELALVTAPSSNEGAAADSKLAGGLDKLTLDSLYEDAIRVSQQQN 449
Query: 490 SSNTVGQQVGSNPFEADSLNQDPFSASSGVTPPANAQMSDMIQQQNFMTQQQ 541
S +Q NP + PF AS+GV P QM++ Q F Q Q
Sbjct: 450 RSYNPWEQ---NPVHNGHMMHQPFYASNGVAAPQPFQMANQ-NHQTFGYQHQ 497
>sp|Q8LBH2|CAP8_ARATH Putative clathrin assembly protein At2g01600 OS=Arabidopsis
thaliana GN=At2g01600 PE=2 SV=2
Length = 571
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/588 (42%), Positives = 348/588 (59%), Gaps = 86/588 (14%)
Query: 9 QPIRKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRP 68
Q RKA ALKD+TKVGLV +NSE LD+AIVKATNH E PK++H+ KI A +R
Sbjct: 5 QSWRKAYGALKDSTKVGLVRVNSEYADLDVAIVKATNHVECPPKDRHLRKIFAATSVTRA 64
Query: 69 RADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYS-RGRALMFNL 127
RADVAYCI +L++RL KT +WTVALKTLIVIHR LRE D +F EEL+N+S RGR L L
Sbjct: 65 RADVAYCIHALSRRLHKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSQRGRILQ--L 122
Query: 128 SHFRDESSPVAWDHSAWIRNYALYLEERVECFRILRYDVE-----KSHMGSGR------- 175
S+F+D+SSP+AWD SAW+R YAL+LEER+ECFR+L+YD E KS+ G +
Sbjct: 123 SNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDTEAERLPKSNPGQDKGYSRTRD 182
Query: 176 LSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKL 235
L +LL+QLP+LQQLL+RL+GC+P+GAA +N++I YAL+++ ES K+Y +I DGI+ L
Sbjct: 183 LDGEELLEQLPALQQLLYRLIGCRPEGAANHNHVIQYALALVLKESFKVYCAINDGIINL 242
Query: 236 VDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTA 295
+DK+FEM +H+A+ +LEIY+++ QA SL+ +E C+ L+ R ++ + +PP SF+T
Sbjct: 243 IDKFFEMAKHEAITSLEIYKRAGQQARSLSDFYEACKGLELARNFQFPVLREPPQSFLTT 302
Query: 296 MEDYVKVAPHIFMLQCTAFSPDFSKTKRCNGDQNVARIEAPKLDDAPGAN-VSTDRQDSD 354
ME+Y+K EAP++ D P + T R D
Sbjct: 303 MEEYIK--------------------------------EAPRVVDVPAEPLLLTYRPDDG 330
Query: 355 QPGAAPEPASNDRREAVATQQLIDTEDTQQRTDQSEAAASQQ----ITDLLGLEELTQQV 410
EP S++ RE + + ++ + + + +A+ Q DL GL
Sbjct: 331 LTTEDTEP-SHEEREMLPSDDVVVVSEETEPSPPPPPSANAQNFIDTDDLWGLNTGAPDT 389
Query: 411 SEMDEKNSLALAIVTSE--------NQPNSENSFTMACQTMSWELALVTAPSSNVAAVAG 462
S ++++N+LALAIV+++ QPN+ + WELALVTAPSS+++A
Sbjct: 390 SVIEDQNALALAIVSTDADPPTPHFGQPNNYDP-------TGWELALVTAPSSDISASTE 442
Query: 463 SKLAGGLDKLTLDSLYDDAIARNAKRNSSNTVGQQVGSNPFEADSLNQDPFSASSGVTPP 522
KLAGGLD LTL SLYDD A S V NPF + DPF++S+G PP
Sbjct: 443 RKLAGGLDTLTLSSLYDDG----AYIASQRPVYGAPAPNPFAS----HDPFASSNGTAPP 494
Query: 523 ANAQMSD---MIQQQNFMTQQQQQEQKQEQEPQMIGQNATSSSNPFLD 567
Q + QQ + Q Q Q Q P T++SNPF D
Sbjct: 495 PQQQAVNNPFGAYQQTYQHQPQPTYQHQSNPP-------TNNSNPFGD 535
>sp|P94017|CAP9_ARATH Putative clathrin assembly protein At1g14910 OS=Arabidopsis
thaliana GN=At1g14910 PE=2 SV=2
Length = 692
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/536 (44%), Positives = 333/536 (62%), Gaps = 64/536 (11%)
Query: 9 QPIRKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRP 68
Q R+A ALKDTTKVGLV +NS+ LD+AIVKATNH E PK++H+ KI A A RP
Sbjct: 5 QSWRRAYGALKDTTKVGLVRVNSDYAELDVAIVKATNHVECPPKDRHLRKIFLATSAIRP 64
Query: 69 RADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYS-RGRALMFNL 127
RADVAYCI +L++RL KT +WTVALK L+VIHR LR+ D +F EEL+N+S +GR + +
Sbjct: 65 RADVAYCIHALSRRLHKTRNWTVALKALLVIHRLLRDGDPTFREELLNFSQKGR--IMQI 122
Query: 128 SHFRDESSPVAWDHSAWIRNYALYLEERVECFRILRYDVE------------KSHMGSGR 175
S+F+D+SSPVAWD S W+R YAL+LEER+ECFR+L+YD+E K + +
Sbjct: 123 SNFKDDSSPVAWDCSGWVRTYALFLEERLECFRVLKYDIEAERLPKVSPGQEKGYSKTRD 182
Query: 176 LSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKL 235
L LL+QLP+LQQLL RL+GCKP+GAA +N++I YALS++ ES K+Y +I +GI+ L
Sbjct: 183 LDGEKLLEQLPALQQLLHRLIGCKPEGAAKHNHIIQYALSLVLKESFKVYCAINEGIINL 242
Query: 236 VDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTA 295
V+K+FEMPRH+A++ LEIY+++ QA +L++ +E+C+ L+ R ++ + +PP SF+T
Sbjct: 243 VEKFFEMPRHEAIKALEIYKRAGLQAGNLSAFYEVCKGLELARNFQFPVLREPPQSFLTT 302
Query: 296 MEDYVKVAPHIFMLQCTA------FSPDFSKTKRCNGDQNVARIEAPKLDDAPGANVSTD 349
ME+Y++ AP M+ T+ ++PD T G + + D A S +
Sbjct: 303 MEEYMRDAPQ--MVDVTSGPLLLTYTPDDGLTSEDVGPSHEEHETSSPSDSA--VVPSEE 358
Query: 350 RQDSDQPGAAPEPASNDRREAVATQQLIDTEDTQQRTDQSEAAASQQITDLLGLEELTQQ 409
Q S Q P S + Q IDT+ DLLGL + T
Sbjct: 359 TQLSSQ-----SPPSVE-----TPQNFIDTD------------------DLLGLHDDTPD 390
Query: 410 VSEMDEKNSLALAIVTSENQPNSENSFTMA--CQTMSWELALVTAPSSNVAAVAGSKLAG 467
+ ++N+LALA+V+++ +S SF A WELALVT PS++++A +LAG
Sbjct: 391 PLAILDQNALALALVSNDVD-SSPFSFGQARDLDPSGWELALVTTPSNDISAATERQLAG 449
Query: 468 GLDKLTLDSLYDDAIARNAKRNSSNTVGQQVGSNPFEADSLNQDPFSASSGVTPPA 523
GLD LTL+SLYDD R A++ + SNPFE QD F+ S V+PP+
Sbjct: 450 GLDTLTLNSLYDDGALRAAQQPAYGV----PASNPFEV----QDLFAFSDSVSPPS 497
>sp|Q8VYT2|CAP6_ARATH Putative clathrin assembly protein At4g25940 OS=Arabidopsis
thaliana GN=At4g25940 PE=2 SV=1
Length = 601
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/548 (41%), Positives = 321/548 (58%), Gaps = 61/548 (11%)
Query: 11 IRKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRA 70
RKA+ A+KD+T V + +NSE K LD+AIVKATNH E PKE+HI +I A +PRA
Sbjct: 7 FRKAVGAIKDSTTVSIAKVNSEFKDLDVAIVKATNHVESAPKERHIRRIFSATSVVQPRA 66
Query: 71 DVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHF 130
DVAYCI +LAKRL+KT +W VA+K LIVIHR LRE D +F EEL+NYS R + +S+F
Sbjct: 67 DVAYCIHALAKRLSKTRNWVVAIKVLIVIHRTLREGDPTFREELLNYSH-RGHILRISNF 125
Query: 131 RDESSPVAWDHSAWIRNYALYLEERVECFRILRYDVEKSHM--GSG-------------- 174
+D++SP+AWD SAWIR YAL+LEER+EC+R+L+YD+E + GSG
Sbjct: 126 KDDTSPLAWDCSAWIRTYALFLEERLECYRVLKYDIEAERLPKGSGASSKNVDFNASQTY 185
Query: 175 ---RLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDG 231
LS +LL+QLP+LQQLL+RL+GC+P+G+A N LI YAL+++ ES K+Y +I DG
Sbjct: 186 RTRMLSDEELLEQLPALQQLLYRLIGCQPEGSAYSNYLIQYALALVLKESFKIYCAINDG 245
Query: 232 ILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPAS 291
I+ LVD +FEM RHDAV+ L IY+++ QA++L +E C+ L+ R ++ + +PP S
Sbjct: 246 IINLVDMFFEMSRHDAVKALNIYKRAGQQAENLADFYEYCKGLELARNFQFPTLRQPPPS 305
Query: 292 FMTAMEDYVKVAPHIFMLQCTAFSPDFSKTKRCNGDQNVARIEAPKLDDAPGANVSTDRQ 351
F+ MEDY+K AP +Q K+ + + +
Sbjct: 306 FLATMEDYIKEAPQSGSVQ-----------KKLEYQEKEEE-----------EQEEEEAE 343
Query: 352 DSDQPGAAPEPASNDRREAVATQQLIDTEDTQQRTDQSEAAASQQIT---DLLGLEELTQ 408
S QP P A N + + Q LI+ E+ Q + E A + DLLGL E+
Sbjct: 344 HSVQP-EEPAEADNQKENSEGDQPLIEEEEEDQEKIEEEDAKPSFLIDTDDLLGLNEINP 402
Query: 409 QVSEMDEKNSLALAIVTSENQ-PNSENSFTMACQTMS-WELALVT----APSSNVAAVAG 462
+ +E++++N+LALAI ++ P N ++ S WELALVT ++N
Sbjct: 403 KAAEIEDRNALALAIYPPGHEAPGPSNILSLIETGGSGWELALVTPQNNNNNNNPRPAPN 462
Query: 463 SKLAGGLDKLTLDSLYDDAIAR------NAKRNSSNTVGQQVGSNPFEADSLNQDPFSAS 516
+KLAGG D L LDSLY+D AR NA NPF+ + QDPF+ S
Sbjct: 463 TKLAGGFDNLLLDSLYEDDSARRQIQLTNAGYGHGGIDTTAAPPNPFQ---MQQDPFAMS 519
Query: 517 SGVTPPAN 524
+ + PP N
Sbjct: 520 NNIAPPTN 527
>sp|Q9LVD8|CAP7_ARATH Putative clathrin assembly protein At5g57200 OS=Arabidopsis
thaliana GN=At5g57200 PE=3 SV=1
Length = 591
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/305 (54%), Positives = 222/305 (72%), Gaps = 12/305 (3%)
Query: 11 IRKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRA 70
RKA ALKDTT VGL +NSE K LDIAIVKATNH E PKE+H+ KI A +PRA
Sbjct: 7 FRKAYGALKDTTTVGLAKVNSEFKDLDIAIVKATNHVESPPKERHVRKIFSATSVIQPRA 66
Query: 71 DVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHF 130
DVAYCI +L+KRL+KT +W VA+K LIVIHR LRE D +F EEL+NYS R ++ +S+F
Sbjct: 67 DVAYCIHALSKRLSKTRNWVVAMKVLIVIHRTLREGDPTFREELLNYSHRRHIL-RISNF 125
Query: 131 RDESSPVAWDHSAWIRNYALYLEERVECFRILRYDVEKSHM--GSG---------RLSIP 179
+D++SP+AWD SAW+R YAL+LEER+EC+R+L+YD+E + SG LS
Sbjct: 126 KDDTSPLAWDCSAWVRTYALFLEERLECYRVLKYDIEAERLPKASGAASKTHRTRMLSGE 185
Query: 180 DLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKY 239
DLL+QLP+LQQLL+RL+GC+P+GAA N LI YAL+++ ES K+Y +I DGI+ LVD +
Sbjct: 186 DLLEQLPALQQLLYRLIGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMF 245
Query: 240 FEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDY 299
FEM RHDAV+ L IY+++ QA++L ++ C+ L+ R ++ + +PP SF+ ME+Y
Sbjct: 246 FEMSRHDAVKALNIYKRAGQQAENLAEFYDYCKGLELARNFQFPTLRQPPPSFLATMEEY 305
Query: 300 VKVAP 304
+K AP
Sbjct: 306 IKEAP 310
>sp|Q9SA65|CAP4_ARATH Putative clathrin assembly protein At1g03050 OS=Arabidopsis
thaliana GN=At1g03050 PE=2 SV=1
Length = 599
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 278/600 (46%), Gaps = 98/600 (16%)
Query: 7 GTQPIRKAIAALKDTTKVGLVNLNSENKGL---DIAIVKATNHDEVLPKEKHISKILEAV 63
G+ ++AI A+KD T VGL +N + L D+AIVKAT H+E +EK+I +IL
Sbjct: 2 GSSKFKRAIGAVKDQTSVGLAKVNGRSASLSELDVAIVKATRHEEFPAEEKYIREILS-- 59
Query: 64 LASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRAL 123
L S R+ + C+ +L++RL KT WTVALKTLI+I R L E D ++ +E+ +R
Sbjct: 60 LTSYSRSYINACVSTLSRRLNKTKCWTVALKTLILIQRLLGEGDQAYEQEIFFATRRGTR 119
Query: 124 MFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECFRILRY------------DVEKSHM 171
+ N+S FRD S +WD+SA++R YALYL+ER++ R+ D E+
Sbjct: 120 LLNMSDFRDVSRSNSWDYSAFVRTYALYLDERLDFRMQARHGKRGVYCVGGEADEEEQDQ 179
Query: 172 GSGRLSIPDLLDQLP--------------SLQQLLFRLLGCKPQGAALYNNLIHYALSII 217
+ LS ++ P LQQLL R L C+P G A N ++ AL I
Sbjct: 180 AAADLSTAIVVRSQPIAEMKTEQIFIRIQHLQQLLDRFLACRPTGNARNNRVVIVALYPI 239
Query: 218 ASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFG 277
ES ++Y +T+ + L++++ E+ D+++ +I+ + Q + L + C+ +
Sbjct: 240 VKESFQIYYDVTEIMGILIERFMELDIPDSIKVYDIFCRVSKQFEELDQFYSWCKNMGIA 299
Query: 278 RGQKYIKIEKPPASFMTAMEDYVKVAPHIFMLQCTAFSPDFSKTKRCNGDQNVARIEAPK 337
R +Y +IEK + M+++++ D S + ++V
Sbjct: 300 RSSEYPEIEKITQKKLDLMDEFIR---------------DKSALEHTKQSKSVKSEADED 344
Query: 338 LDDAPGANVSTDRQDSDQPGAAPEPASND----RREAVATQQLIDTEDTQQRTDQSEAAA 393
D+A V+ +++D + A PEP + + E A +++I E Q+
Sbjct: 345 DDEARTEEVNEEQEDMNAIKALPEPPPKEEDDVKPEEEAKEEVI-IEKKQE--------- 394
Query: 394 SQQITDLLGLEELTQQVSEMDEKNSLALAIVTSENQPNSENSFTMACQTMS-----WELA 448
++ DLL L T +SLALA+ S + + WE A
Sbjct: 395 --EMGDLLDLGN-TNGGEAGQAGDSLALALFDGPYASGSGSESGPGWEAFKDDSADWETA 451
Query: 449 LVTAPSSNVAAVAGSKLAGGLDKLTLDSLYDDAIARNAKRNSSNTVGQQVGSNPF----- 503
LV ++N++ S+L GG D L L+ +Y A NA +S G ++
Sbjct: 452 LVQT-ATNLSG-QKSELGGGFDMLLLNGMYQHG-AVNAAVKTSTAYGASGSASSMAFGSA 508
Query: 504 ------------------EADSLN----QDPFSASSGVTPPANAQMSDMIQQQNFMTQQQ 541
A ++N DPF+AS V PPA QM+DM ++Q + ++Q
Sbjct: 509 GRPAATMLALPAPSTANGNAGNINSPVPMDPFAASLEVAPPAYVQMNDMEKKQRMLMEEQ 568
>sp|Q8GX47|CAP3_ARATH Putative clathrin assembly protein At4g02650 OS=Arabidopsis
thaliana GN=At4g02650 PE=2 SV=2
Length = 611
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 162/598 (27%), Positives = 271/598 (45%), Gaps = 92/598 (15%)
Query: 7 GTQPIRKAIAALKDTTKVGLVNLNSENKGL---DIAIVKATNHDEVLPKEKHISKILEAV 63
G+ +++AI A+KD T VGL + + L +IA+VKAT HD+ ++K+I +IL
Sbjct: 2 GSSKLKRAIGAVKDQTSVGLAKVGGRSSSLTELEIAVVKATRHDDYPAEDKYIREIL--C 59
Query: 64 LASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRAL 123
L S R V+ C+ +L++RL KT +W+VALKTLI+I R L + D ++ +E+ +R
Sbjct: 60 LTSYSRNYVSACVATLSRRLNKTKNWSVALKTLILIQRLLTDGDRAYEQEIFFATRRGTR 119
Query: 124 MFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECFRI----------------LRYDVE 167
+ N+S FRD S +WD+SA++R YALYL+ER++ +R+ E
Sbjct: 120 LLNMSDFRDASQSDSWDYSAFVRTYALYLDERLD-YRMQGRRGKKKSGGGGGGDGDSGEE 178
Query: 168 KSHMGS----------------GRLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIH 211
H G+ + + +++ LQQLL R L C+P G A N ++
Sbjct: 179 DDHRGTSNDIRSKAIVVKSKPVAEMKTEKIFNRVQHLQQLLDRFLACRPTGNAKNNRVVI 238
Query: 212 YALSIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEIC 271
A+ I ES +LY +IT+ + L++++ E+ HD+++ EI+ + Q D L + C
Sbjct: 239 VAMYPIVKESFQLYYNITEIMGVLIERFMELDIHDSIKVYEIFCRVSKQFDELDPFYGWC 298
Query: 272 RELDFGRGQKYIKIEKPPASFMTAMEDYVKVAPHIFMLQCTAFSPDFSKTKRCNGDQNVA 331
+ + R +Y ++EK + M+++++ D S +
Sbjct: 299 KNMAVARSSEYPELEKITQKKLDLMDEFIR---------------DKSALAAQTTKSSSK 343
Query: 332 RIEAPKLDDAPGANVSTDRQDSDQPGAAPEP-ASNDRREAVATQQLIDTEDTQQRTDQSE 390
R + +++ + +++D + A P P + E + D E+ R DQ
Sbjct: 344 RSNKSEEEESKTEYIQENQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEVVSRQDQE- 402
Query: 391 AAASQQITDLLGLEELTQQVSEMDEKNSLALAI---VTSENQPNSENSFTMACQTMSWEL 447
DLL L + V+ +SLALA+ V + + WE
Sbjct: 403 -------GDLLDLTD-EAGVTAGTVGDSLALALFDGVVGTESASGPGWEAFNDNSADWET 454
Query: 448 ALVTAPSSNVAAVAGSKLAGGLDKLTLDSLYDDAIARNAKRNSS-------------NTV 494
LV S+ + S+L GG D L LD +Y A + S+ +
Sbjct: 455 DLVR--SATRLSGQKSELGGGFDTLLLDGMYQYGAVNAAVKTSTAYGSSGSASSVAFGSA 512
Query: 495 GQQVGS-----------NPFEADSLNQDPFSASSGVTPPANAQMSDMIQQQNFMTQQQ 541
G S N + DPF+AS V PPA QM+DM ++Q + ++Q
Sbjct: 513 GSPAASMLALPAPPPTANGNRNSPVMVDPFAASLEVAPPAYVQMNDMEKKQRLLMEEQ 570
>sp|Q9ZVN6|AP180_ARATH Clathrin coat assembly protein AP180 OS=Arabidopsis thaliana
GN=AP180 PE=1 SV=1
Length = 653
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 175/324 (54%), Gaps = 34/324 (10%)
Query: 11 IRKAIAALKDTTKVGLVNLNSENKG------LDIAIVKATNHDEVLPKEKHISKILEAVL 64
++KAI A+KD T + L + + G L++AI+KAT+HDE +P + + + ++
Sbjct: 5 LKKAIGAVKDQTSISLAKVANGATGGGDLTTLEVAILKATSHDEEVPIDDRLVTEILGII 64
Query: 65 ASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALM 124
+S+ ++ A C ++ +R+ +T +W VALK+L+++ R ++ D F E+++ + A +
Sbjct: 65 SSK-KSHAASCAAAIGRRIGRTRNWIVALKSLVLVLRIFQDGDPYFPREVLHAMKRGAKI 123
Query: 125 FNLSHFRDESSPVAWDHSAWIRNYALYLEERVECF----------------RI------- 161
NLS FRD+S+ WD +A++R +ALYL+ER++CF RI
Sbjct: 124 LNLSSFRDDSNSCPWDFTAFVRTFALYLDERLDCFLTGKLQRRYTNREQTGRISTNSTTR 183
Query: 162 LRYDVE---KSHMGSGRLSIPD-LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSII 217
R++ + KSH + R P LLD++ Q+LL R + +P G A N L+ +L +
Sbjct: 184 SRFNPKAGIKSHEPAVRDMKPVMLLDKITYWQKLLDRAIATRPTGDAKANRLVKMSLYAV 243
Query: 218 ASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFG 277
ES LY I+DG+ L+D +F + + + ++ Q + L + +++ + + G
Sbjct: 244 MQESFDLYRDISDGLALLLDSFFHLQYQSCINAFQACVRASKQFEELNAFYDLSKSIGIG 303
Query: 278 RGQKYIKIEKPPASFMTAMEDYVK 301
R +Y I+K + +++++K
Sbjct: 304 RTSEYPSIQKISLELLETLQEFLK 327
>sp|Q8LF20|CAP2_ARATH Putative clathrin assembly protein At2g25430 OS=Arabidopsis
thaliana GN=At2g25430 PE=1 SV=2
Length = 653
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Query: 11 IRKAIAALKDTTKVGLVNLNSE-NKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPR 69
IRKAI A+KD T +G+ + S L++AIVKAT+HD+ EK+I +IL L S R
Sbjct: 5 IRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYIREILN--LTSLSR 62
Query: 70 ADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSH 129
+ C+ S+++RL+KT W VALK L+++HR L E D F EE++ +R M N+S
Sbjct: 63 GYILACVTSVSRRLSKTRDWVVALKALMLVHRLLNEGDPIFQEEILYSTRRGTRMLNMSD 122
Query: 130 FRDESSPVAWDHSAWIRNYALYLEERVE 157
FRDE+ +WDHSA++R YA YL++R+E
Sbjct: 123 FRDEAHSSSWDHSAFVRTYAGYLDQRLE 150
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%)
Query: 181 LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKYF 240
+ ++ LQ+LL R L +P G A + +I AL + ES KLY I + + L+DK+F
Sbjct: 254 IFGKMGHLQRLLDRFLSLRPTGLAKNSRMILIALYPVVRESFKLYADICEVLAVLLDKFF 313
Query: 241 EMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYV 300
+M D V+ + Y + Q D L + + C+E R +Y ++++ + + +E++V
Sbjct: 314 DMEYSDCVKAFDAYASAAKQIDELIAFYNWCKETGVARSSEYPEVQRITSKLLETLEEFV 373
Query: 301 K 301
+
Sbjct: 374 R 374
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 395 QQITDLLGLEELTQQVSEMDEKNSLALAIVTSENQPN------SENSFTMACQT------ 442
Q DL+ L E +V+ D+ N ALA+ N S N T A Q
Sbjct: 432 QFTEDLVNLRE--DEVTADDQGNKFALALFAGPPGNNGKWEAFSSNGVTSAWQNPAAEPG 489
Query: 443 -MSWELALVTAPSSNVAAVAGSKLAGGLDKLTLDSLYDDAIARNAKRNSSNTVG------ 495
WELALV S+ A L GG D L L+ +YD + R S T G
Sbjct: 490 KADWELALVETTSNLEKQTAA--LGGGFDNLLLNGMYDQGMVRQHVSTSQLTGGSASSVA 547
Query: 496 --------QQVGSNPF---EADSLNQDPFSASSGVTPPANAQMSDMIQQQNFMT 538
QV + P + +NQDPF+AS + PP+ QM++M ++Q ++
Sbjct: 548 LPLPGKTNNQVLALPAPDGTVEKVNQDPFAASLTIPPPSYVQMAEMEKKQYLLS 601
>sp|Q8S9J8|CAP1_ARATH Probable clathrin assembly protein At4g32285 OS=Arabidopsis
thaliana GN=At4g32285 PE=1 SV=2
Length = 635
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 11 IRKAIAALKDTTKVGLVNLNSE-NKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPR 69
+RKAI +KD T +G+ + S L++AIVKAT+HD+ +K+I +IL L S R
Sbjct: 5 MRKAIGVVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDQSSDKYIREILS--LTSLSR 62
Query: 70 ADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSH 129
V C+ S+++RL KT W VALK L+++HR L E D F EE++ +R + N+S
Sbjct: 63 GYVHACVTSVSRRLKKTRDWIVALKALMLVHRLLNEGDPLFQEEILYATRRGTRILNMSD 122
Query: 130 FRDESSPVAWDHSAWIRNYALYLEERVE 157
FRDE+ +WDHSA++R YA YL++R+E
Sbjct: 123 FRDEAHSSSWDHSAFVRTYASYLDQRLE 150
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 66/121 (54%)
Query: 181 LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKYF 240
+ ++ LQ+LL R L C+P G A + +I A+ + ES +LY I + + L+DK+F
Sbjct: 234 IFGKMGHLQRLLDRFLSCRPTGLAKNSRMILIAMYPVVKESFRLYADICEVLAVLLDKFF 293
Query: 241 EMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYV 300
+M D V+ + Y + Q D L + + C++ R +Y ++++ + + +E++V
Sbjct: 294 DMEYTDCVKAFDAYASAAKQIDELIAFYHWCKDTGVARSSEYPEVQRITSKLLETLEEFV 353
Query: 301 K 301
+
Sbjct: 354 R 354
>sp|Q05140|AP180_RAT Clathrin coat assembly protein AP180 OS=Rattus norvegicus GN=Snap91
PE=1 SV=1
Length = 915
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 39 AIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIV 98
A+ KAT H+ + PK+KH+ +++A + ++ +L +R A SW V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQAT--NETNVNIPQMADTLFER-ATNSSWVVVFKALVT 81
Query: 99 IHRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVEC 158
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+
Sbjct: 82 THHLMVHGN----ERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFS 137
Query: 159 FRILRYD---VEKSHMGSGRLSIPD-LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYAL 214
+R + +D V+K G R +P+ LL +P LQ + LL L N +I+ A
Sbjct: 138 YRQMAFDFARVKKGADGVMRTMVPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAF 197
Query: 215 SIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICREL 274
++ + +KL+ DG++ L++K+FEM + LEIY++ ++ ++ ++ E+
Sbjct: 198 MLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVADEV 257
Query: 275 DFGRGQKYIKIEKPPASFMTAMEDYV 300
+G + + P+S M +E ++
Sbjct: 258 GIDKGD-IPDLTQAPSSLMETLEQHL 282
>sp|Q61548|AP180_MOUSE Clathrin coat assembly protein AP180 OS=Mus musculus GN=Snap91 PE=1
SV=1
Length = 901
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 39 AIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIV 98
A+ KAT H+ + PK+KH+ +++A + ++ +L +R A SW V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQAT--NETNVNIPQMADTLFER-ATNSSWVVVFKALVT 81
Query: 99 IHRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVEC 158
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+
Sbjct: 82 THHLMVHGN----ERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFS 137
Query: 159 FRILRYD---VEKSHMGSGRLSIPD-LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYAL 214
+R + +D V+K G R +P+ LL +P LQ + LL L N +I+ A
Sbjct: 138 YRQMAFDFARVKKGADGVMRTMVPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAF 197
Query: 215 SIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICREL 274
++ + +KL+ DG++ L++K+FEM + LEIY++ ++ ++ ++ ++
Sbjct: 198 MLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQV 257
Query: 275 DFGRGQKYIKIEKPPASFMTAMEDYV 300
+G + + P+S M +E ++
Sbjct: 258 GIDKGD-IPDLTQAPSSLMETLEQHL 282
>sp|O60641|AP180_HUMAN Clathrin coat assembly protein AP180 OS=Homo sapiens GN=SNAP91 PE=1
SV=2
Length = 907
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 39 AIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIV 98
A+ KAT H+ + PK+KH+ +++A + ++ +L +R A SW V K L+
Sbjct: 25 AVCKATTHEVMGPKKKHLDYLIQAT--NETNVNIPQMADTLFER-ATNSSWVVVFKALVT 81
Query: 99 IHRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVEC 158
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+
Sbjct: 82 THHLMVHGN----ERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFS 137
Query: 159 FRILRYD---VEKSHMGSGRLSIPD-LLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYAL 214
+R + +D V+K G R P+ LL +P LQ + LL L N +I+ A
Sbjct: 138 YRQMAFDFARVKKGADGVMRTMAPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAF 197
Query: 215 SIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICREL 274
++ + +KL+ DG++ L++K+FEM + LEIY++ ++ ++ ++ ++
Sbjct: 198 MLLFKDLIKLFACYNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQV 257
Query: 275 DFGRGQKYIKIEKPPASFMTAMEDYV 300
+G + + P+S M +E ++
Sbjct: 258 GIDKGD-IPDLTQAPSSLMETLEQHL 282
>sp|Q13492|PICAL_HUMAN Phosphatidylinositol-binding clathrin assembly protein OS=Homo
sapiens GN=PICALM PE=1 SV=2
Length = 652
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 135/265 (50%), Gaps = 12/265 (4%)
Query: 40 IVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVI 99
+ KAT H+ + PK+KH+ +++ + ++ SL +R + SW V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCT--NEMNVNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 100 HRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECF 159
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+ +
Sbjct: 83 HHLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSY 138
Query: 160 RILRYDVEKSHMGSG----RLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALS 215
R + +D K G+ ++ LL +P +Q + LL L N +I+ A
Sbjct: 139 RQVAFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 216 IIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELD 275
++ ++++L+ + +GI+ L++KYF+M ++ L+IY+K ++ ++ ++ ++
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 276 FGRGQKYIKIEKPPASFMTAMEDYV 300
RG + + P+S + A+E ++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|Q7M6Y3|PICA_MOUSE Phosphatidylinositol-binding clathrin assembly protein OS=Mus
musculus GN=Picalm PE=1 SV=1
Length = 660
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 135/265 (50%), Gaps = 12/265 (4%)
Query: 40 IVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVI 99
+ KAT H+ + PK+KH+ +++ + ++ SL +R + SW V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCT--NEMNVNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 100 HRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECF 159
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+ +
Sbjct: 83 HHLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSY 138
Query: 160 RILRYDVEKSHMGSG----RLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALS 215
R + +D K G+ ++ LL +P +Q + LL L N +I+ A
Sbjct: 139 RQVAFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 216 IIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELD 275
++ ++++L+ + +GI+ L++KYF+M ++ L+IY+K ++ ++ ++ ++
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 276 FGRGQKYIKIEKPPASFMTAMEDYV 300
RG + + P+S + A+E ++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|O55012|PICA_RAT Phosphatidylinositol-binding clathrin assembly protein OS=Rattus
norvegicus GN=Picalm PE=1 SV=1
Length = 640
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 135/265 (50%), Gaps = 12/265 (4%)
Query: 40 IVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVI 99
+ KAT H+ + PK+KH+ +++ + ++ SL +R + SW V K+LI
Sbjct: 26 VCKATTHEIMGPKKKHLDYLIQCT--NEMNVNIPQLADSLFERTTNS-SWVVVFKSLITT 82
Query: 100 HRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECF 159
H + + E I Y R +FNLS+F D+S +D S +IR Y+ YL E+ +
Sbjct: 83 HHLMVYGN----ERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSY 138
Query: 160 RILRYDVEKSHMGSG----RLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALS 215
R + +D K G+ ++ LL +P +Q + LL L N +I+ A
Sbjct: 139 RQVAFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFM 198
Query: 216 IIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELD 275
++ ++++L+ + +GI+ L++KYF+M ++ L+IY+K ++ ++ ++ ++
Sbjct: 199 LLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVG 258
Query: 276 FGRGQKYIKIEKPPASFMTAMEDYV 300
RG + + P+S + A+E ++
Sbjct: 259 IDRGD-IPDLSQAPSSLLDALEQHL 282
>sp|Q9VI75|PICA_DROME Phosphatidylinositol-binding clathrin assembly protein LAP
OS=Drosophila melanogaster GN=lap PE=1 SV=3
Length = 468
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 24/284 (8%)
Query: 33 NKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVA 92
+GL ++ KAT + + PK+KH+ ++ + P + + L +R ++ +W V
Sbjct: 21 GQGLAKSVCKATTEECIGPKKKHLDYLVHCT--NEPNVSIPHLANLLIER-SQNANWVVV 77
Query: 93 LKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHFRDESSP-----------VAWDH 141
K+LI H + + F + L + + FNLS F D+ + + +D
Sbjct: 78 YKSLITTHHLMAYGNERFMQYLASSNS----TFNLSSFLDKGTVQDGGMGVPGGRMGYDM 133
Query: 142 SAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSI-----PDLLDQLPSLQQLLFRLL 196
S +IR YA YL E+ +R + +D K G S+ LL LP LQ L LL
Sbjct: 134 SPFIRRYAKYLNEKSLSYRAMAFDFCKVKRGKEEGSLRSMNAEKLLKTLPVLQAQLDALL 193
Query: 197 GCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRK 256
Q L N +I+ + ++ + ++L+ DGI+ L++KYF+M + A L++Y+K
Sbjct: 194 EFDCQSNDLSNGVINMSFMLLFRDLIRLFACYNDGIINLLEKYFDMNKKHARDALDLYKK 253
Query: 257 SESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYV 300
+ D + ++ + +G + K P+S + A+E ++
Sbjct: 254 FLVRMDRVGEFLKVAENVGIDKGD-IPDLTKAPSSLLDALEQHL 296
>sp|Q9XZI6|PICA_CAEEL Phosphatidylinositol-binding clathrin assembly protein unc-11
OS=Caenorhabditis elegans GN=unc-11 PE=1 SV=1
Length = 586
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 28/292 (9%)
Query: 36 LDIAIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKT 95
L I KAT + + PK+KH+ +L + P + L +R + +WTV K
Sbjct: 37 LGKTICKATTEEVMAPKKKHLDYLLHCT--NEPNVSIPSMANLLIER-TQNPNWTVVYKA 93
Query: 96 LIVIHRALREVDHSFCEELINYSRGRALMFNLSHFRDE-SSPVAWDHSAWIRNYALYLEE 154
LI IH + + F + L + + FNL+ F D+ +D S +R YA Y+ E
Sbjct: 94 LITIHNIMCYGNERFSQYLASCNT----TFNLTAFVDKVGGAGGYDMSTHVRRYAKYIGE 149
Query: 155 RVECFRILRYDVEKSHMGS-----GRLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNL 209
++ +R+ +D K G + LL +P LQ + LL + L N +
Sbjct: 150 KINTYRMCAFDFCKVKRGREDGLLRTMHTDKLLKTIPILQNQIDALLEFSVTTSELNNGV 209
Query: 210 IHYALSIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFE 269
I+ + ++ + ++L+ DGI+ +++KYF+M + L+ Y+ ++ D +
Sbjct: 210 INCSFILLFRDLIRLFACYNDGIINVLEKYFDMNKKQCRDALDTYKSFLTRLDKVAEFLR 269
Query: 270 ICRELDFGRGQKYIKIEKPPASFMTAMEDYV--------------KVAPHIF 307
+ + RG+ + + PAS + A+E ++ VAPH F
Sbjct: 270 VAESVGIDRGE-IPDLTRAPASLLEALEAHLIHLEGGKAPPPTQQHVAPHQF 320
>sp|Q9C502|CAP11_ARATH Putative clathrin assembly protein At1g33340 OS=Arabidopsis
thaliana GN=At1g33340 PE=2 SV=1
Length = 374
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 140/302 (46%), Gaps = 23/302 (7%)
Query: 11 IRKAIAALKDTTKVGLVNLNSENKG----LDIAIVKATNHDEVLPKEKHISKILEAVLAS 66
R+ + KD +G + + N+ +++A+V+AT+HD+ +K + +IL L S
Sbjct: 9 FRQVLGLAKDHASIGRAIVQNYNEKAFFDIEVAVVRATSHDDCPVDDKTMHEIL--FLVS 66
Query: 67 RPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEEL-INYSRGRALMF 125
+ + + +++RLAKT VA KTL++ HR LR S ++L I ++ G L
Sbjct: 67 NTPGSIPFLAEQISRRLAKTRDCLVAGKTLLLFHRLLRGSSRSIEQQLHIAHTSGH-LQI 125
Query: 126 NLSHFR---DESSPVAWDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLS----- 177
S F D S V +++NY YL+ERV +E G + S
Sbjct: 126 GCSWFMMSLDSRSFV------FLQNYVAYLQERVGWIINQAGKLEPVMSGGTKFSRYKEK 179
Query: 178 -IPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLV 236
+ + LP Q+ + ++L C P A +NL+ A I ES ++Y++ +DG+ LV
Sbjct: 180 SMDLVFHILPKCQEFIAQVLKCSPVDAWPIDNLVQAATGNILKESFQVYMTYSDGMTALV 239
Query: 237 DKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAM 296
F++ R + RK+ Q L L++ CR + Y ++ + A+
Sbjct: 240 SMLFDLSRPARDLACGMLRKASQQIQDLRILYDKCRGFAGMKSLDYPSVQAISMDHIVAL 299
Query: 297 ED 298
E+
Sbjct: 300 EE 301
>sp|Q9FRH3|CAP13_ARATH Putative clathrin assembly protein At1g25240 OS=Arabidopsis
thaliana GN=At1g25240 PE=3 SV=1
Length = 376
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 19/296 (6%)
Query: 12 RKAIAALKDTTKVGLVNLNSE----NKGLDIAIVKATNHDEVLPKEKHISKILEAVLASR 67
++A ALKD + + + + N LD AI+ AT+HD+ + ++ + + +S
Sbjct: 5 KRASGALKDRKTLFTIGFSRKTSFRNPDLDSAIIHATSHDDSSVDYHNAHRVYKWIRSSP 64
Query: 68 PRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNL 127
A++ + +L+ R+ +T SW VALK L+++H L C ++ + R L F+L
Sbjct: 65 --ANLKPLVHALSSRVNRTRSWIVALKALMLVHGVL-------CCKVTSLQEIRRLPFDL 115
Query: 128 SHFRD-ESSPV-AWDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSIPDLLDQL 185
S F D S P W +A+IR Y +L++ L + + H S+ L+++
Sbjct: 116 SDFSDGHSRPSKTWGFNAFIRAYFSFLDQYS---FFLSDQIRRRHKKPQLDSVNQELERI 172
Query: 186 PSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVDKYFEMP-R 244
LQ LL LL +P + LI A+ + E +Y I I KL+ K +
Sbjct: 173 EKLQSLLHMLLQIRPMADNMKKTLILEAMDCVVIEIFDIYGRICSAIAKLLIKIHPAAGK 232
Query: 245 HDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYV 300
+AV L+I +K+ SQ + L FE C+E K P + A+E +
Sbjct: 233 AEAVIALKIVKKATSQGEDLALYFEFCKEFGVSNAHDIPKFVTIPEEDIKAIEKVI 288
>sp|O60167|YHC3_SCHPO ENTH domain-containing protein C19F8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC19F8.03c PE=1
SV=1
Length = 649
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 39 AIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIV 98
A+ KAT PK KH+ ILEA + + IQ+L +RL K SWT+ KTLIV
Sbjct: 13 AVKKATKVKLAAPKYKHVEIILEAT--TEDPETLENVIQALCERL-KEQSWTIVFKTLIV 69
Query: 99 IHRALREVDHSFCEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVEC 158
H L+E + ++ R R L SS +A + I NY+ +L ER +
Sbjct: 70 FHVMLKEGAPNTTIVALS-QRPRIL-----EVLKASSLLAQGKN--IYNYSRFLSERAKQ 121
Query: 159 FRILRYDVEKSHMGSG------RLSIPD-LLDQLPSLQQLLFRLLGCKPQGAALYNNLIH 211
+ R V+ + +G + + + LL + +Q L RL+ C+ + N++
Sbjct: 122 YG--RLGVDYAQVGDAPKKKIREMKLENGLLRNVEGIQAQLRRLIKCQFVAEEIDNDIAI 179
Query: 212 YALSIIASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEIC 271
A ++ + + L+ ++ G++ +++ YFEM HDA ++L IY+ +Q + + +
Sbjct: 180 TAFRLLVGDLLVLFKAVNIGVINVLEHYFEMGHHDAAQSLRIYKTFVNQTEDIINYLSTA 239
Query: 272 RELDFGRGQKYIKIEKPPASFMTAMEDYV 300
R L+F I+ P S ++E+Y+
Sbjct: 240 RSLEFVTKFPVPNIKHAPISLTASLEEYL 268
>sp|Q8L936|CAP16_ARATH Putative clathrin assembly protein At4g40080 OS=Arabidopsis
thaliana GN=At4g40080 PE=2 SV=2
Length = 365
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 22/196 (11%)
Query: 15 IAALKDT---TKVGLVNLNSENKGLD--IAIVKATNHD-EVLPKEKHISKILEAVLASRP 68
I +KD +K LV+ N+++K L +++++AT HD P +H++ IL A SR
Sbjct: 11 IGRIKDKASQSKAALVSSNTKSKTLSFHLSVLRATTHDPSTPPGNRHLAVILSAGTGSRA 70
Query: 69 RADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINY--SRGRALMFN 126
A A ++S+ +RL T VALK+LI+IH ++ ++L + S GR +
Sbjct: 71 TASSA--VESIMERLHTTGDACVALKSLIIIHHIVKHGRFILQDQLSVFPASGGRNYL-K 127
Query: 127 LSHFRDESSPVAWDHSAWIRNYALYLEERVECFRILRYDV----------EKSHMGSGRL 176
LS FRDE SP+ W+ S+W+R YALYLE + RI+ + + E M S L
Sbjct: 128 LSAFRDEKSPLMWELSSWVRWYALYLEHLLSTSRIMGFFISSTSSTIHKEEYEEMVSS-L 186
Query: 177 SIPDLLDQLPSLQQLL 192
+ DLL ++ +L LL
Sbjct: 187 TNSDLLREIDALVGLL 202
>sp|P38856|AP18A_YEAST Clathrin coat assembly protein AP180A OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1801 PE=1 SV=1
Length = 637
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 51 PKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSF 110
PK+K++ IL L + D ++ L R+ T +WT+ K+L+V+H +RE
Sbjct: 19 PKQKYLDPIL---LGTSNEEDFYEIVKGLDSRINDT-AWTIVYKSLLVVHLMIREGSKDV 74
Query: 111 CEELINYSRGRALMFNLSHFRDESSPVAWDHSAWIRNYALYLEERVECFRILRYD----- 165
L YSR F++ + R + + D A R Y YL+ R F ++ D
Sbjct: 75 A--LRYYSRNLEF-FDIENIRGSNGSASGDMRALDR-YDNYLKVRCREFGKIKKDYVRDG 130
Query: 166 -----VEKSHMGSGR---LSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSII 217
+ + GS R SI LD + SL+ + L+ K L N LI + ++
Sbjct: 131 YRTLKLNSGNYGSSRNKQHSINIALDHVESLEVQIQALIKNKYTQYDLSNELIIFGFKLL 190
Query: 218 ASESVKLYVSITDGILKLVDKYFEMPRHDAVRTLEIYR 255
+ + LY ++ +GI+ L++ +FE+ H+A RTL++Y+
Sbjct: 191 IQDLLALYNALNEGIITLLESFFELSHHNAERTLDLYK 228
>sp|Q9C9X5|CAP12_ARATH Putative clathrin assembly protein At1g68110 OS=Arabidopsis
thaliana GN=At1g68110 PE=2 SV=1
Length = 379
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 139/306 (45%), Gaps = 35/306 (11%)
Query: 12 RKAIAALKDTTK---VGLVNLNS--ENKGLDIAIVKATNHDEVLPKEKHISKILEAVLAS 66
++A AA+KD VG NS N L+ AI+KAT+HD+ + ++ + + +S
Sbjct: 5 KRAAAAIKDRKSLLAVGFSRRNSSYRNADLEAAIIKATSHDDSSVDYSNAHRVYKWIRSS 64
Query: 67 RPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFN 126
P ++ + +++ R+ T SW VALK+L+++H L C+ R L F+
Sbjct: 65 -P-LNLKTLVYAISSRVNHTRSWIVALKSLMLLHGVL------CCKVPSVVGEFRRLPFD 116
Query: 127 LSHFRDESSPVA--WDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSIPDL--- 181
LS F D S ++ W + ++R Y +L + D G+ R S+
Sbjct: 117 LSDFSDGHSCLSKTWGFNVFVRTYFAFLHH----YSSFLSDQIHRLRGNNRRSLEKTSDS 172
Query: 182 ----LDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVD 237
L+++ LQ LL +L +P + LI A+ + ES+ +Y I ++K+
Sbjct: 173 VIQELERIQKLQSLLDMILQIRPVADNMKKTLILEAMDCLVIESINIYGRICGAVMKV-- 230
Query: 238 KYFEMP---RHDAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMT 294
+P + +A L+I K+ SQ + L FE C+ ++ + + P +
Sbjct: 231 ----LPLAGKSEAATVLKIVNKTTSQGEDLIVYFEFCKGFGVSNAREIPQFVRIPEEEVE 286
Query: 295 AMEDYV 300
A+E +
Sbjct: 287 AIEKMI 292
>sp|P53309|AP18B_YEAST Clathrin coat assembly protein AP180B OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1802 PE=1 SV=1
Length = 568
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 51 PKEKHISKILEAVLASRPRADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSF 110
PK+K++ IL ++R ++ + L RL+ T +WT+ K LIV+H +++ +
Sbjct: 20 PKQKYVDPILSGTSSARGLQEITHA---LDIRLSDT-AWTIVYKALIVLHLMIQQGEKDV 75
Query: 111 CEELINYSRGRALMFNLSHFRDESSPVAWDHSAW--IRNYALYLEERVECF-RI----LR 163
L +YS ++ R S W + ++ Y YL+ R E + R+ LR
Sbjct: 76 T--LRHYSHN----LDVFQLRKISHTTKWSSNDMRALQRYDEYLKTRCEEYGRLGMDHLR 129
Query: 164 YDVEKSHMGS-GRLSIPDLLDQLPSLQQLLFRLLGCKPQGAALYNNLIHYALSIIASESV 222
+ +GS +LS+ + LD + SL+ + L+ K + L N+L+ YA ++ + +
Sbjct: 130 DNYSSLKLGSKNQLSMDEELDHVESLEIQINALIRNKYSVSDLENHLLLYAFQLLVQDLL 189
Query: 223 KLYVSITDGILKLVDKYFEMPRHDAVRTLEIYRKSESQADSLTSLFEICRELDFGR--GQ 280
LY ++ +G++ L++ +FE+ A RTL++Y+ D + + R L G+ G
Sbjct: 190 GLYNALNEGVITLLESFFELSIEHAKRTLDLYK------DFVDMTEYVVRYLKIGKAVGL 243
Query: 281 KYIKIEKPPASFMTAMEDYVK 301
K I+ + ++E++++
Sbjct: 244 KIPVIKHITTKLINSLEEHLR 264
>sp|Q9LQW4|CAP15_ARATH Putative clathrin assembly protein At1g14686 OS=Arabidopsis
thaliana GN=At1g14686 PE=3 SV=1
Length = 339
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 23/296 (7%)
Query: 12 RKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRAD 71
++A LKD +L + + L A+VKAT+HDE+ + I VL+S +
Sbjct: 5 KRAAVVLKDGP-----SLIAADDILTAAVVKATSHDELSIDTESAQFIYRHVLSSP--SS 57
Query: 72 VAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHFR 131
+ + ++ R+ +T SW VALK L+++H C+ + S GR L F+LS F
Sbjct: 58 LKPLVSLISSRVKRTRSWAVALKGLMLMHGFF------LCKSTVAESIGR-LPFDLSSFG 110
Query: 132 DESSPV---AWDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSIPDLLDQLPSL 188
+ +S + + + ++R Y +L+ R IL +D + H + S+ L + +
Sbjct: 111 EGNSRIMSKSGGFNLFVRAYFAFLDRR----SILFHDGNR-HRYNEESSVLIRLVIIRKM 165
Query: 189 QQLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLV-DKYFEMPRHDA 247
Q ++ L+ KP G + +I+ A+ + SE +++Y I I +++ + + ++ + +A
Sbjct: 166 QIIVDSLIRIKPIGENMMIPVINEAMENVVSEIMEIYGWICRRIAEVLPNVHSKIGKTEA 225
Query: 248 VRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYVKVA 303
L+I KS Q L FE C++L Q+ + P + + +++ V+ A
Sbjct: 226 DLALKIVAKSMKQGGELKKYFEFCKDLGVSNAQEIPNFVRIPEADVIHLDELVRTA 281
>sp|Q9SHV5|CAP14_ARATH Putative clathrin assembly protein At2g01920 OS=Arabidopsis
thaliana GN=At2g01920 PE=2 SV=3
Length = 312
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 136/301 (45%), Gaps = 37/301 (12%)
Query: 12 RKAIAALKDTTKVGLVNLNSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRAD 71
R+ A+KD K+ L+ E A++KAT+H++V +++ I + S P +
Sbjct: 9 RRVSGAIKD--KLSLITATDEK--FTAAVIKATSHNDVSMDIENVQFIYRYI-QSNP-SS 62
Query: 72 VAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSHFR 131
I++++ R+ T +WTVALK L+++H F + S GR L F+LS F
Sbjct: 63 FKPIIRAVSLRVEHTRNWTVALKCLMLLHGLF------FSGIMTVDSIGR-LPFDLSGFG 115
Query: 132 DESSPVA--WDHSAWIRNYALYLEERVECFRILRYDVEKSHMGSGRLSIPDLLDQLPSLQ 189
S + + ++R Y ++L+ER IL Y+ K+ + RL I + +Q
Sbjct: 116 RRKSRFSRTGRFNIFVRAYFMFLDER----SILYYN--KNMI---RLEI------IVKMQ 160
Query: 190 QLLFRLLGCKPQGAALYNNLIHYALSIIASESVKLYVSITDGILKLVD----KYFEMPRH 245
+++ L+ KP G L+ A+ + SE V + I G + E+
Sbjct: 161 RIVDSLMRIKPIGE---TPLVIEAMEYVISEVVLINGHICRGFAGFLSDVQSNMLEISSA 217
Query: 246 DAVRTLEIYRKSESQADSLTSLFEICRELDFGRGQKYIKIEKPPASFMTAMEDYVKVAPH 305
+A + I KS SQ + L FE CR Q+ I + S M ++ + +AP
Sbjct: 218 EADLAMNIVAKSLSQREKLFKYFEFCRGFGVTNAQETSNILRITESQMIVLDKLLHIAPE 277
Query: 306 I 306
+
Sbjct: 278 L 278
>sp|Q8H0W9|CAP17_ARATH Putative clathrin assembly protein At5g10410 OS=Arabidopsis
thaliana GN=At5g10410 PE=2 SV=2
Length = 338
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 15 IAALKDTTKVGLVNL-----NSENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPR 69
I KD +G L ++ K + +A++K+T P + S + AV++
Sbjct: 9 IGKFKDKASIGKARLVHSFGSTAVKYIHLALLKSTTRT---PNKPPNSDYVSAVISYSNS 65
Query: 70 ADVAYCIQSLAKRLAKTHSWTVALKTLIVIHRALREVDHSFCEELINYSRGRALMFNLSH 129
+ RL T + VA K+LIVIH+ ++ F E + + R L+
Sbjct: 66 RYAPAAFSAALWRLRVTKNAIVATKSLIVIHKLIKSSRDKF--EGLGHGRNN---LKLNE 120
Query: 130 FRDESSPVAWDHSAWIRNYALYLE 153
F D+SS + + S WIR Y YL+
Sbjct: 121 FSDKSSNLTLELSQWIRWYGQYLD 144
>sp|Q9FKQ2|CAP18_ARATH Putative clathrin assembly protein At5g65370 OS=Arabidopsis
thaliana GN=At5g65370 PE=3 SV=1
Length = 295
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 23 KVGLVNLNS--ENKGLDIAIVKATNHDEVLPKEKHISKILEAVLASRPRADVAYCIQSLA 80
K+ +V+L S K +D+A++KAT+H P L++ + + D + ++
Sbjct: 19 KLNVVHLCSSVNAKTIDLALLKATSHTSNNPPSDKYVTFLQSTIDTCYGPDT---VDAIL 75
Query: 81 KRLAKTHSWTVALKTLIVIHRALR-EVDHSFCEELINYSRGRALMFN-------LSHFRD 132
RL T VA K LI++H+ ++ E ++ + L N R L++ L+
Sbjct: 76 HRLRVTTDVCVAAKCLILLHKMVKSESGYNGEDSLRNNINHRTLIYTQGGSNLKLNDLNV 135
Query: 133 ESSPVAWDHSAWIRNYALYLE 153
SS + + W++ Y YL+
Sbjct: 136 NSSRFTRELTPWVQWYKQYLD 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,819,292
Number of Sequences: 539616
Number of extensions: 8299058
Number of successful extensions: 52240
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 36069
Number of HSP's gapped (non-prelim): 9206
length of query: 583
length of database: 191,569,459
effective HSP length: 123
effective length of query: 460
effective length of database: 125,196,691
effective search space: 57590477860
effective search space used: 57590477860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)