BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037439
(154 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 3 GQFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKH--WRDGTPLQLLDSNL 60
G+ S K+DV+ +GV+ LE ITG++ + D++ W ++ L+D +L
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 269
Query: 61 TDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
+Y +EV + I V LLC P +RP M+ V L
Sbjct: 270 QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 3 GQFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKH--WRDGTPLQLLDSNL 60
G+ S K+DV+ +GV+ LE ITG++ + D++ W ++ L+D +L
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 277
Query: 61 TDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
+Y +EV + I V LLC P +RP M+ V L
Sbjct: 278 QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNL 60
+ G+ + KSDVYSFGV+ E + + +L ++ + +G Q++D NL
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
Query: 61 TDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALN 98
D + + + + C+ DRPSM + L
Sbjct: 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNL 60
+ G+ + KSDVYSFGV+ E + + +L ++ + +G Q++D NL
Sbjct: 214 IKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL 273
Query: 61 TDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALN 98
D + + + + C+ DRPSM + L
Sbjct: 274 ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MHGQFSVKSDVYSFGVIALETITG 24
+ G+ + KSD+YSFGV+ LE ITG
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MHGQFSVKSDVYSFGVIALETITG 24
+ G+ + KSD+YSFGV+ LE ITG
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MHGQFSVKSDVYSFGVIALETITG 24
+ G+ + KSD+YSFGV+ LE ITG
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 1 MHGQFSVKSDVYSFGVIALETITG 24
+ G+ + KSD+YSFGV+ LE ITG
Sbjct: 198 LRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 264
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 VYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTP--LQLLDSNLTDSYSRDE 68
V FGV L K +R ++TD +G L+ Y G P ++LL+ D + DE
Sbjct: 133 VRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDE 192
Query: 69 VIRCIHVGLLCVHED 83
+ L +ED
Sbjct: 193 GLELAITALTKANED 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNL 60
++G+F++KSDV+SFG++ E +T K Y ++L + +R P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVT--KGRVPYPGMNNREVLEQVERGYRMPCP-------- 228
Query: 61 TDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSY 100
+D I + + C +DP +RP+ L Y
Sbjct: 229 -----QDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDY 263
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE------LLEKDYRMERPEGCPE 237
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 238 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 280
Query: 114 LVVEKRG 120
L KRG
Sbjct: 281 L--GKRG 285
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE------LLEKDYRMERPEGCPE 237
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 238 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 280
Query: 114 LVVEKRG 120
L KRG
Sbjct: 281 L--GKRG 285
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 3 GQFSVKSDVYSFGVIALETIT 23
G F++KSDV+SFG++ +E +T
Sbjct: 187 GSFTIKSDVWSFGILLMEIVT 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 3 GQFSVKSDVYSFGVIALETIT 23
G F++KSDV+SFG++ +E +T
Sbjct: 344 GSFTIKSDVWSFGILLMEIVT 364
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 3 GQFSVKSDVYSFGVIALETIT 23
G F++KSDV+SFG++ +E +T
Sbjct: 360 GSFTIKSDVWSFGILLMEIVT 380
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ FS+KSDV++FGV+ E T G DLL ++ + +G P ++
Sbjct: 205 YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVY--- 261
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C PADRPS A T A +
Sbjct: 262 --------ELMRA------CWKWSPADRPSFAETHQAFET 287
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 186 YGTFTIKSDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 193 YGTFTIKSDVWSFGILLTEIVT 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 185 YGTFTIKSDVWSFGILLTEIVT 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 31/106 (29%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE------LLEKDYRMERPEGCPE 237
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
++ E++R C +P+DRPS A A +
Sbjct: 238 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFET 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVT 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 190 YGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 189 YGTFTIKSDVWSFGILLTEIVT 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 192 YGTFTIKSDVWSFGILLTEIVT 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 194 YGTFTIKSDVWSFGILLTEIVT 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 180 YGTFTIKSDVWSFGILLTEIVT 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G F++KSDV+SFG++ E +T
Sbjct: 179 YGTFTIKSDVWSFGILLTEIVT 200
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 239
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 240 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
Query: 114 LVVEKRG 120
L KRG
Sbjct: 283 L--GKRG 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTT 203
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 239
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 240 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
Query: 114 LVVEKRG 120
L KRG
Sbjct: 283 L--GKRG 287
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTT 200
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTT 199
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 244
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 245 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
Query: 114 LVVEKRG 120
L KRG
Sbjct: 288 L--GKRG 292
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTT 377
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
FS SDV+SFGV+ E +L+Y + + + T ++ S++ + Y
Sbjct: 231 FSSASDVWSFGVVMWE------------------VLAYGERPYWNMTNRDVI-SSVEEGY 271
Query: 65 SRDEVIRCIH----VGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSLVV 116
+ C H + L C H+D A RP + V L++ + P+SL + V
Sbjct: 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL---IRSPESLRATATV 324
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
FS SDV+SFGV+ E +L+Y + + + T ++ S++ + Y
Sbjct: 231 FSSASDVWSFGVVMWE------------------VLAYGERPYWNMTNRDVI-SSVEEGY 271
Query: 65 SRDEVIRCIH----VGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSLVV 116
+ C H + L C H+D A RP + V L++ + P+SL + V
Sbjct: 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL---IRSPESLRATATV 324
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
++G+F++KSDV+SFG++ E T
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTT 459
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 199 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 255
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSL 114
E++R C +P+DRPS A A + + D + L
Sbjct: 256 --------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 296
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 241
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 242 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 284
Query: 114 L 114
L
Sbjct: 285 L 285
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 244
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSL 114
E++R C +P+DRPS A A + + D + L
Sbjct: 245 --------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 247
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 248 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 244
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 245 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 287
Query: 114 L 114
L
Sbjct: 288 L 288
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 242
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 243 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 33/127 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 446
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 447 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 489
Query: 114 LVVEKRG 120
L KRG
Sbjct: 490 L--GKRG 494
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 239
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 240 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
Query: 114 L 114
L
Sbjct: 283 L 283
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 242
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 243 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 244
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSL 114
E++R C +P+DRPS A A + + D + L
Sbjct: 245 --------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 285
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 240
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 241 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 283
Query: 114 L 114
L
Sbjct: 284 L 284
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y+ LL ++ R +G P
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE------LLEKDYRMERPEGCPE 239
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 240 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 282
Query: 114 L 114
L
Sbjct: 283 L 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 243
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCSL 114
E++R C +P+DRPS A A + + D + L
Sbjct: 244 --------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 284
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 247
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 248 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 247
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 248 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 19/100 (19%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPLQLLDSN 59
+ +FS+KSDV++FGV+ E T G +LL ++ R +G P ++
Sbjct: 190 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY--- 246
Query: 60 LTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNS 99
E++R C +P+DRPS A A +
Sbjct: 247 --------ELMRA------CWQWNPSDRPSFAEIHQAFET 272
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 5 FSVKSDVYSFGVIALETIT-GKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDS 63
+S KSDV+S+GV+ E + G Q D D S R+G ++
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD--EDFCS----RLREGMRMR------APE 325
Query: 64 YSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALN 98
YS E+ + + L C H DP +RP A V L
Sbjct: 326 YSTPEIYQIM---LDCWHRDPKERPRFAELVEKLG 357
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRF 30
M+ +F+ +SDV+SFGVI E T K F
Sbjct: 208 MYRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 31/124 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y +LL ++ R +G P
Sbjct: 390 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ELLEKDYRMERPEGCPE 443
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 444 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 486
Query: 114 LVVE 117
L E
Sbjct: 487 LGKE 490
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 31/124 (25%)
Query: 2 HGQFSVKSDVYSFGVIALETIT-------GKKNSRFYQTDGAGDLLSYSWKHWR-DGTPL 53
+ +FS+KSDV++FGV+ E T G S+ Y +LL ++ R +G P
Sbjct: 432 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY------ELLEKDYRMERPEGCPE 485
Query: 54 QLLDSNLTDSYSRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDSLNCS 113
++ E++R C +P+DRPS A A + + D +
Sbjct: 486 KVY-----------ELMRA------CWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKE 528
Query: 114 LVVE 117
L E
Sbjct: 529 LGKE 532
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
M+G+FS+ SD++S+GV+ E +
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 1 MHGQFSVKSDVYSFGVIALETIT 23
M+G+FS+ SD++S+GV+ E +
Sbjct: 220 MYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query: 3 GQFSVKSDVYSFGVIALETIT-------GKKN-------SRFYQ-------TDGAGDLLS 41
G F++KSDV+SFG++ E +T G+ N S+ Y+ D D++
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMK 245
Query: 42 YSWKHWRDGTP-LQLLDSNLTDSYSRDE 68
WK + P L S L D Y+ E
Sbjct: 246 MCWKEKAEERPTFDYLQSVLDDFYTATE 273
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
FS +SDVYS+G++ E +TG+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGE 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDS 63
+F+ KSDV+SFGV+ E +T + + Y+ DL + + R P
Sbjct: 204 RFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLTHFLAQGRRLPQP----------E 251
Query: 64 YSRDEVIRCIHVGLLCVHEDPADRPSMATTV 94
Y D + + + C DPA RP+ V
Sbjct: 252 YCPDSLYQVMQQ---CWEADPAVRPTFRVLV 279
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
+S K DV+S+G+I E IT +K F + G + ++ + ++ L +
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 65 SRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDS 109
+R C +DP+ RPSM V + P D
Sbjct: 238 TR------------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
+S K DV+S+G+I E IT +K F + G + ++ + ++ L +
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKP--FDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 65 SRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLPVPDS 109
+R C +DP+ RPSM V + P D
Sbjct: 239 TR------------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 271
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
+ K+D++SFG+ A+E TG + Y +L + ++ + D + Y
Sbjct: 199 YDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY 255
Query: 65 SRDEVIRCIHVGLLCVHEDPADRPSMA 91
+ + I LC+ +DP RP+ A
Sbjct: 256 GKS-FRKMIS---LCLQKDPEKRPTAA 278
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
++ KSDV++FGV E T + Y ++ Y R P LD Y
Sbjct: 226 YTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMY 283
Query: 65 SRDEVIRCIHVGLLCVHEDPADRPSMATTVLALNSYSVTLP 105
S C DP DRP+ + L L +LP
Sbjct: 284 S-------------CWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPLQLLDSNLTDSY 64
+ K+D++SFG+ A+E TG + Y +L + ++ + D + Y
Sbjct: 204 YDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY 260
Query: 65 SRDEVIRCIHVGLLCVHEDPADRPSMA 91
+ + I LC+ +DP RP+ A
Sbjct: 261 GKS-FRKMIS---LCLQKDPEKRPTAA 283
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 5 FSVKSDVYSFGVIALETITGK 25
+S +SDVY+FG++ E +TG+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 4 QFSVKSDVYSFGVIALETIT-GKKNSR 29
+FS KSDV+SFGV+ E + G+K R
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G++S +SDV+SFG++ ET +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 2 HGQFSVKSDVYSFGVIALETIT 23
+G++S +SDV+SFG++ ET +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQ 32
++ +F+ +SDV+SFGV+ E T K +YQ
Sbjct: 210 LYRKFTTESDVWSFGVVLWEIFTYGKQP-WYQ 240
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 22/88 (25%)
Query: 3 GQFSVKSDVYSFGVIALETIT-------GKKN-------SRFYQ-------TDGAGDLLS 41
G F++KS+V+SFG++ E +T G+ N S+ Y+ D D++
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMK 244
Query: 42 YSWKHWRDGTP-LQLLDSNLTDSYSRDE 68
WK + P L S L D Y+ E
Sbjct: 245 MCWKEKAEERPTFDYLQSVLDDFYTATE 272
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQ 32
++ +F+ +SDV+SFGV+ E T K +YQ
Sbjct: 204 LYRKFTTESDVWSFGVVLWEIFTYGKQP-WYQ 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSK 222
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSK 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 191 KFSVASDVWSFGVVLYELFTYIEKSK 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSK 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSK 224
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSK 249
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSK 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSK 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSK 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSK 236
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 198 KFSVASDVWSFGVVLYELFTYIEKSK 223
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 4 QFSVKSDVYSFGVIALETITGKKNSR 29
+FSV SDV+SFGV+ E T + S+
Sbjct: 200 KFSVASDVWSFGVVLYELFTYIEKSK 225
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKKNSRFYQ 32
++ +F+ +SDV+SFGV+ E T K +YQ
Sbjct: 233 LYRKFTTESDVWSFGVVLWEIFTYGKQP-WYQ 263
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MHGQFSVKSDVYSFGVIALETITGKK--NSRFYQTDGA 36
M+ +FS KSD+++FGV+ E + K RF ++ A
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 222
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 232 KFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 210 KFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 205 KFTTKSDVWSFGVLLWELMT 224
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 231 KFTTKSDVWSFGVLLWELMT 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 208 KFTTKSDVWSFGVLLWELMT 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 4 QFSVKSDVYSFGVIALETIT 23
+F+ KSDV+SFGV+ E +T
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|3NGB|H Chain H, Crystal Structure Of Broadly And Potently Neutralizing
Antibody Vrc01 In Complex With Hiv-1 Gp120
pdb|3NGB|B Chain B, Crystal Structure Of Broadly And Potently Neutralizing
Antibody Vrc01 In Complex With Hiv-1 Gp120
pdb|3NGB|E Chain E, Crystal Structure Of Broadly And Potently Neutralizing
Antibody Vrc01 In Complex With Hiv-1 Gp120
pdb|3NGB|J Chain J, Crystal Structure Of Broadly And Potently Neutralizing
Antibody Vrc01 In Complex With Hiv-1 Gp120
Length = 224
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1 MHGQFSVKSDVYS-FGVIALETITGKKNSRFYQTDGAGDLLSYSWKHWRDGTPL 53
+ G+ ++ DVYS + L ++T + ++ T G ++ ++HW GTP+
Sbjct: 64 LQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPV 117
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 5 FSVKSDVYSFGVIALETITGKKNSR 29
FS SDV+S+GV+ E +TG+ R
Sbjct: 191 FSKGSDVWSYGVLLWELLTGEVPFR 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,508,466
Number of Sequences: 62578
Number of extensions: 180401
Number of successful extensions: 770
Number of sequences better than 100.0: 157
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 161
length of query: 154
length of database: 14,973,337
effective HSP length: 90
effective length of query: 64
effective length of database: 9,341,317
effective search space: 597844288
effective search space used: 597844288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)