Your job contains 1 sequence.
>037441
MDASSAKWLAELGMDEYNIIHQCHMESVADLFSSKQDITAALGGNLKQSLSTSESYSSYP
NNNNNGKSQTSFDERPNKLLKTYSWKSTTTTDRASADHSSPTPQPHFLNFDQKPISSNPN
KQLYGNLNMYSCSLKPKVEAPPSTGNTTSPPPFPPLGSQNYETVINPNHGTKRSYPVTRT
PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE
QTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKDVLIRIH
CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKDIRL
AFLKLM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037441
(366 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 523 1.1e-54 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 525 1.6e-53 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 535 1.5e-51 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 432 1.4e-44 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 433 9.6e-41 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 366 1.2e-33 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 361 4.1e-33 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 344 2.6e-31 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 288 2.2e-25 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 217 2.8e-16 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 215 2.0e-15 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 201 5.7e-14 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 167 3.4e-13 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 196 5.5e-13 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 194 9.6e-13 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 184 1.3e-12 2
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 188 1.5e-12 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 161 2.7e-11 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 144 9.2e-11 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 173 1.1e-10 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 175 1.1e-10 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 154 1.1e-10 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 174 1.2e-10 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 174 1.3e-10 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 149 2.1e-10 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 169 4.0e-10 2
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 168 4.4e-10 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 170 5.8e-10 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 166 7.0e-10 2
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 126 8.9e-10 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 122 1.9e-09 2
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 121 2.2e-09 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 161 3.6e-09 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 161 5.2e-09 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 154 5.8e-09 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 159 8.3e-09 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 143 8.4e-09 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 155 1.2e-08 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 134 1.6e-08 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 151 2.5e-08 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 132 5.1e-08 2
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 149 6.6e-08 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 146 7.3e-08 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 146 9.0e-08 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 146 9.9e-08 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 144 3.4e-07 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 118 6.4e-07 2
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 127 6.6e-07 3
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 141 7.4e-07 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 123 8.5e-07 2
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 140 8.7e-07 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 114 1.1e-06 2
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 137 1.1e-06 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 114 1.5e-06 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 112 1.7e-06 2
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 132 1.9e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 129 2.3e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 136 2.3e-06 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 138 2.4e-06 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 128 4.1e-06 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 131 4.6e-06 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 133 5.5e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 122 5.7e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 127 6.2e-06 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 132 8.0e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 130 1.3e-05 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 131 1.4e-05 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 106 1.9e-05 2
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 125 1.9e-05 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 129 1.9e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 126 2.0e-05 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 127 2.4e-05 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 126 2.5e-05 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 127 2.9e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 128 3.2e-05 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 123 3.4e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 127 3.7e-05 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 125 4.4e-05 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 120 4.6e-05 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 122 5.0e-05 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 125 5.0e-05 1
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 118 6.6e-05 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 119 6.8e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 117 7.0e-05 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 112 8.9e-05 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 120 9.3e-05 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 122 0.00011 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 121 0.00012 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 118 0.00013 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 115 0.00013 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 117 0.00014 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 122 0.00016 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 117 0.00018 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 116 0.00019 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 114 0.00023 1
TAIR|locus:2158392 - symbol:BHLH92 "AT5G43650" species:37... 114 0.00026 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 115 0.00031 1
UNIPROTKB|Q7XZF8 - symbol:OSJNBb0033J23.9 "Helix-loop-hel... 100 0.00034 2
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 116 0.00035 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 116 0.00037 1
WARNING: Descriptions of 18 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 523 (189.2 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 111/192 (57%), Positives = 143/192 (74%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
GTKR+ P +R + AQDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDA++++K
Sbjct: 136 GTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIK 195
Query: 230 ELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEAR 289
LQERV LEEQ K+R +ES+V VKKS+L++ D LPEIE R
Sbjct: 196 YLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFS---DLDLPEIEVR 252
Query: 290 VSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCT 349
SD+DVLI+I CEKQKG L K+++++E LH+ ITN+SVL FG TLDITIIA K ++F
Sbjct: 253 FSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFG-PTLDITIIAKKESDFDM 311
Query: 350 TMKDLVKDIRLA 361
T+ D+VK +R A
Sbjct: 312 TLMDVVKSLRSA 323
Score = 59 (25.8 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 MDASSAKWLAELGMDEYNIIHQCHMESV 28
M S +W +E ++E +II Q HM S+
Sbjct: 1 MSILSTRWFSEQEIEENSIIQQFHMNSI 28
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 525 (189.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 111/196 (56%), Positives = 142/196 (72%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
GTKR+ +TR+ + AQDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAI+++K
Sbjct: 110 GTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIK 169
Query: 230 ELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEAR 289
LQE VK EEQ K++T+ESVV VKKS LV+ + LPEIE R
Sbjct: 170 YLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVR 229
Query: 290 VSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCT 349
VS KDVLI+I CEKQKG + K++ ++E L LSITN++VLPFG T DI+IIA KN F
Sbjct: 230 VSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDM 288
Query: 350 TMKDLVKDIRLAFLKL 365
++D+VK++ KL
Sbjct: 289 KIEDVVKNLSFGLSKL 304
Score = 46 (21.3 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 73 DERPNKLLKTYSWKSTTTTDRASADHSSPTPQP--HFLNFDQ 112
+ERP+K+LKT + S +S++ P QP L+F++
Sbjct: 34 EERPSKILKT-THISPNLHPFSSSNPPPPKHQPSSRILSFEK 74
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 137/365 (37%), Positives = 194/365 (53%)
Query: 5 SAKWLAELGMDEYNIIHQCHMESVADLFSSKQDITAALGGNLKQXXXXXXXXXXXXXXXX 64
+ +W + + MDE + HQ + + + ++ +Q I A G
Sbjct: 2 ATQWFSNMVMDEPSFFHQWQSDGLLEQYTEQQ-IAVAFGQ--AGEADAAAAAAAMMVQQQ 58
Query: 65 XXXXQTSFDERPNKLLKTY-SWKSTTTTDRASADHSSPTPQPHFLNFDQKP---ISSNPN 120
+ + RP K K SW S T + AD SSPT + D +S
Sbjct: 59 QYAAAAAAEHRPRKAAKVNTSWDSCITEQGSPADSSSPTILSFGGHADAAAAAAFASAGQ 118
Query: 121 KQ---LYGNLNMYSCSLKPKVEAXXXXXXXXXXXXXXXXXXQNYETVINPNHGTKRSYPV 177
Q YG + + +LKPK E ++Y+ ++ + +
Sbjct: 119 AQSAPYYGGAS--AAALKPKQELDAAAAPFSQARPVK----RSYDAMVAADVAKAPAAAA 172
Query: 178 TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKV 237
+R + Q+HI+AERKRREKLSQRFIALS I+PGLKKMDKASVLGDAI+YVK+LQ++VK
Sbjct: 173 SRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKG 232
Query: 238 LEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLI 297
LEE+ ++R VE+ V VKKSQL S A LPEIEARVS++ VL+
Sbjct: 233 LEEEARRRPVEAAVLVKKSQL--SADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLV 290
Query: 298 RIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKD 357
+IHCE +KG L +S++E + L+I NT+VLPF +S+LDITI+A F ++KD+VK
Sbjct: 291 KIHCENRKGALITALSEVETIGLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKK 350
Query: 358 IRLAF 362
+ AF
Sbjct: 351 LNQAF 355
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 432 (157.1 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 90/193 (46%), Positives = 130/193 (67%)
Query: 179 RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
R P L ++H++AERKRR+KL++R IALSA+LPGLKK DKA+VL DAI+++K+LQERVK L
Sbjct: 125 REPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
Query: 239 EEQ--TKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDA--------TLPEIEA 288
EE+ K+ +S++ VK+SQ+ + + T+P IEA
Sbjct: 185 EEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEA 244
Query: 289 RVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFC 348
RVSD+D+LIR+HCEK KG + K++S LE L + N+ LPFGNSTL ITI+ + +F
Sbjct: 245 RVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFS 304
Query: 349 TTMKDLVKDIRLA 361
++++VK+IR+A
Sbjct: 305 RPVEEVVKNIRVA 317
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 65/159 (40%), Positives = 93/159 (58%)
Query: 115 ISSNPNKQLYGNLNMYSCSLKPKVEAXXXXXXXXXXXXXXXXXXQN-YETVINPNH---- 169
++ P KQ+ N NM S S P + N ET +N ++
Sbjct: 48 LAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSM 107
Query: 170 ----GTKRSYPVT----RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVL 221
G+KR V R P L ++H++AERKRR+KL++R IALSA+LPGLKK DKA+VL
Sbjct: 108 DQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVL 167
Query: 222 GDAIRYVKELQERVKVLEEQ--TKKRTVESVVYVKKSQL 258
DAI+++K+LQERVK LEE+ K+ +S++ VK+SQ+
Sbjct: 168 EDAIKHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQV 206
Score = 54 (24.1 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 74 ERPNKLLKTYS-WKSTTTTDRASADHSSPTPQPHFLNFDQKPISSNP 119
ERP K +KT + ST+++ +S+ S T Q ++F +NP
Sbjct: 50 ERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQ--VISFGSPDTKTNP 94
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 94/198 (47%), Positives = 135/198 (68%)
Query: 170 GTKRSYPV--TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
GTKR TR+P LA++H++AERKRREKLS++FIALSA+LPGLKK DK ++L DAI
Sbjct: 101 GTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISR 160
Query: 228 VKELQERVKVL-EEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEI 286
+K+LQE+++ L EE+ R +ES++ VKKS++ D LPEI
Sbjct: 161 MKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFD---EEPNLSCSPSVHIEFDQALPEI 217
Query: 287 EARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAE 346
EA++S D+LIRI CEK KG + +++ +E L I N+ VLPFG+STLDIT++A + +
Sbjct: 218 EAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKD 277
Query: 347 FCTT-MKDLVKDIRLAFL 363
F + +KDLV+++RLA +
Sbjct: 278 FSMSILKDLVRNLRLAMV 295
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 80/161 (49%), Positives = 109/161 (67%)
Query: 181 PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
P QDHI+AER+RREK++QRFI LS ++PGLKKMDKA++LGDA++YVKELQE+VK LEE
Sbjct: 162 PGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEE 221
Query: 241 QTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIH 300
+ ++V V+KS SG + +PEIE RV ++ VL+R+
Sbjct: 222 EDGGGRPAAMV-VRKSSC--SGRQSAAGDGDG-------EGRVPEIEVRVWERSVLVRVQ 271
Query: 301 CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA 341
C +GLL +L+S++E L L IT+TSV+PF ST+ ITI A
Sbjct: 272 CGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTVIITITA 312
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 78/163 (47%), Positives = 109/163 (66%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTK 243
AQ+HI+AERKRREK++QRFI LS ++PGLKKMDKA++L DA+RYVKE+QE++ LE Q +
Sbjct: 190 AQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE-QHQ 248
Query: 244 KRTVESVVYVKKSQLVVS----GXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRI 299
VES + +KK + S G ++LPEIEA++S +V++RI
Sbjct: 249 NGGVESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTARSSLPEIEAKISHGNVMVRI 308
Query: 300 HCEKQ-KGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA 341
H E KG L +L++ +E LHL IT+T+V+PF T ITI+A
Sbjct: 309 HGENNGKGSLVRLLAAVEGLHLGITHTNVMPFSACTAIITIMA 351
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 71/164 (43%), Positives = 105/164 (64%)
Query: 178 TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKV 237
+R PA AQ+H++AERKRREKL Q+F+AL+ I+PGLKK DK S+LG I YVK+L+E+VK
Sbjct: 279 SRPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKA 338
Query: 238 LEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLI 297
LEE +++ + + K ++ V + P +EA + VL+
Sbjct: 339 LEEGSRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSS--PTVEASIHGNTVLL 396
Query: 298 RIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA 341
+I C++++GLL ++S+LE LSI NTSV+PF +S L+ITI A
Sbjct: 397 KICCKERRGLLVMILSELEKQGLSIINTSVVPFTDSCLNITITA 440
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 67/165 (40%), Positives = 102/165 (61%)
Query: 182 ALAQ-DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
A AQ +H++AERKRREK++QRF+ LSA++P LKKMDKA++L DA Y++ELQE++K LEE
Sbjct: 125 AYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEE 184
Query: 241 QTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKD--VLIR 298
Q R E+ + ++ PEIE R S + V++R
Sbjct: 185 QAAARVTEAAMATPSPARAMNHL-----------------PVPPEIEVRCSPTNNVVMVR 227
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITNTSVLPF--GNSTLDITIIA 341
IHCE +G++ ++++++E +HL I N +V+PF +T+ ITI A
Sbjct: 228 IHCENGEGVIVRILAEVEEIHLRIINANVMPFLDQGATMIITIAA 272
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 217 (81.4 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 65/227 (28%), Positives = 107/227 (47%)
Query: 108 LNF-DQ-KPISSNPNKQLYGNLNMYSCSLKPKVEAXXXXXXXXXXXXXXXXXXQNYE-TV 164
LNF D+ K S NP+ Y + K + + E +V
Sbjct: 367 LNFGDEGKRSSGNPDPSSYSGQTQFENKRKRSMVLNEDKVLSFGDKTAGESDHSDLEASV 426
Query: 165 INPNHGTKRSYPVTRTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASV 220
+ KR R PA ++ H+ AER+RREKL+QRF AL A++P + KMDKAS+
Sbjct: 427 VKEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 486
Query: 221 LGDAIRYVKELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXD 280
LGDAI Y+ EL+ KV++ +++K +++ +++ +L ++G
Sbjct: 487 LGDAIAYINELKS--KVVKTESEKLQIKN--QLEEVKLELAGRKASASGGDMSSSCSSIK 542
Query: 281 ATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
EIE ++ D +IR+ K+ +L+S L L L + + S+
Sbjct: 543 PVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASM 589
Score = 40 (19.1 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 85 WKSTTTTDRASADHSSPTPQ---PHFLNFDQKPI 115
W +TT + ++PTP P F+Q+ +
Sbjct: 35 WPPASTTTTTATTETTPTPAMEIPAQAGFNQETL 68
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 215 (80.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 70/249 (28%), Positives = 108/249 (43%)
Query: 89 TTTDRASADHSSPTPQPHFLNFDQKPISSNPNKQLYGNLNMYSCSLKPKVE------AXX 142
T T A+A+ + Q + + ++N + N M S S P A
Sbjct: 417 TPTLTAAANDAKSNNQKRSMEATSRASNTNNHPAATANEGMLSFSSAPTTRPSTGTGAPA 476
Query: 143 XXXXXXXXXXXXXXXXQNYETVINPNHGTKRSYPVTRTPALAQD----HIMAERKRREKL 198
++ V P KR R PA ++ H+ AER+RREKL
Sbjct: 477 KSESDHSDLEASVREVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRREKL 536
Query: 199 SQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTVESVVYVKKSQL 258
+QRF AL A++P + KMDKAS+LGDAI Y+ EL+ ++ LE T K T++S + K +
Sbjct: 537 NQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALE--TDKETLQSQMESLKKE- 593
Query: 259 VVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEML 318
EIEA++ + +IR+ C K+ +L++ L L
Sbjct: 594 ----RDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMIRVQCHKRNHPAARLMTALREL 649
Query: 319 HLSITNTSV 327
L + + SV
Sbjct: 650 DLDVYHASV 658
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 76 PNKLLKTYSWKSTTTTDRASADHSSPTP-QP 105
P+++ + ++T T+ S +PTP QP
Sbjct: 301 PHQIQHFENGSTSTLTENPSPSVHAPTPSQP 331
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 201 (75.8 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 41/75 (54%), Positives = 59/75 (78%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQ---T 242
+H+ AER+RREKL+QRF AL +++P + KMDKAS+LGDAI Y+KELQE+VK++E++ T
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGT 454
Query: 243 KKRTVES-VVYVKKS 256
K ES + V++S
Sbjct: 455 DKSLSESNTITVEES 469
Score = 40 (19.1 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 10/61 (16%), Positives = 27/61 (44%)
Query: 284 PEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALK 343
PE++ + +++V++R+ ++I + ++S+ L T+ T +
Sbjct: 470 PEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAK-LSLAEDTMFHTFVIKS 528
Query: 344 N 344
N
Sbjct: 529 N 529
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 167 (63.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 36/72 (50%), Positives = 49/72 (68%)
Query: 179 RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
R P H++AER+RREKL+++FI L +++P + KMDK S+LGD I YV L++RV L
Sbjct: 356 RLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 239 E----EQTKKRT 246
E EQ KRT
Sbjct: 416 ENTHHEQQHKRT 427
Score = 73 (30.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 282 TLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLH-LSITNTSV 327
T E+E + + DVL+ + CE + GLL + L++LH L I T+V
Sbjct: 434 TSEEVEVSIIENDVLLEMRCEYRDGLL---LDILQVLHELGIETTAV 477
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 196 (74.1 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 45/142 (31%), Positives = 76/142 (53%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKR 245
+H+ AER+RREKL+QRF +L A++P + KMDKAS+LGDAI Y+ EL+ +++ E K+
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESD-KEE 473
Query: 246 TVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQK 305
+ + + K G + EI+ ++ DV+IR+ C K+
Sbjct: 474 IQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKD 533
Query: 306 GLLPKLISQLEMLHLSITNTSV 327
+ + L+ L L + + S+
Sbjct: 534 HPGARFMEALKELDLEVNHASL 555
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 194 (73.4 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKR 245
+H+ AER+RREKL+QRF +L A++P + KMDKAS+LGDAI Y+ EL+ +++ E K
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESD--KE 473
Query: 246 TVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQK 305
++ + V + +G E++ ++ D +IRI C K+
Sbjct: 474 ELQKQIDVMNKE---AGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRN 530
Query: 306 GLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEF 347
K + L+ L L + + S+ + + + + N F
Sbjct: 531 HPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFF 572
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 184 (69.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 36/77 (46%), Positives = 53/77 (68%)
Query: 168 NHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
N KR A A +H+ AER+RREKL+QRF AL +++P + KMDKAS+LGDA+ Y
Sbjct: 415 NRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSY 474
Query: 228 VKELQERVKVLEEQTKK 244
+ EL ++KV+E + ++
Sbjct: 475 INELHAKLKVMEAERER 491
Score = 49 (22.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 285 EIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKN 344
+I + S +DV +RI+C + ++ E + + N++ L T+ T + +K+
Sbjct: 505 DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSN-LEVSQDTVLHTFV-VKS 562
Query: 345 AE 346
E
Sbjct: 563 EE 564
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 188 (71.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 51/166 (30%), Positives = 89/166 (53%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTK 243
+HI ER RR ++++ +L A+LP +++ D+AS++G AI YVK L++ ++ LE Q
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQ-- 236
Query: 244 KRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDAT-LPEIEARVSDKDVLIRIHCE 302
KRT + S++V + D T +P+IEA V V +++ CE
Sbjct: 237 KRTQQQ----SNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCE 292
Query: 303 KQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFC 348
K++G L K I LE L L++ + ++ +S++ + LK + C
Sbjct: 293 KKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSF-NLKMEDEC 337
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 161 (61.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 29/60 (48%), Positives = 47/60 (78%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR+KL+ R AL +++P + K+D+AS+LGDAI YVKELQ K L+++ ++ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Score = 63 (27.2 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 11/44 (25%), Positives = 27/44 (61%)
Query: 284 PEIE-ARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTS 326
P+++ A++ ++ +++ CE + G +L+ L+ L L +TN +
Sbjct: 428 PQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNAN 471
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 144 (55.7 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 27/65 (41%), Positives = 50/65 (76%)
Query: 180 TPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
+PA +++ +++ER RR+KL+QR AL +++P + K+DKASV+ D+I Y++EL ++ K LE
Sbjct: 49 SPASSKN-VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLE 107
Query: 240 EQTKK 244
+ ++
Sbjct: 108 AEIRE 112
Score = 63 (27.2 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 290 VSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITI 339
+ +K V++ I C K++ + +L LE L+L+I T+ F S L T+
Sbjct: 174 MGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF-TSRLSTTL 222
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/146 (26%), Positives = 77/146 (52%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
++H+M+ER+RREKL++ F+ L +++P + K+DKAS+L + I Y+KEL+ RV+ LE + K
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELE--SGK 244
Query: 245 RTVESVVYVKKSQLVVSGXXXXXXXXXXXXX-----XXXXDATLPEIEARVSDKDVL-IR 298
+ S+ ++ G + T ++ V DKD L +
Sbjct: 245 KVSRPAKRKPCSETIIGGGGGGGGAGAVKEHHHWVLSESQEGTPSDVRVIVMDKDELHLE 304
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITN 324
+ C ++ ++ ++ ++ L L + +
Sbjct: 305 VQCRWKELMMTRVFDAIKSLRLDVVS 330
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/64 (53%), Positives = 50/64 (78%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE--EQ 241
A +H+ AER+RREKL+QRF AL A++P + KMDKAS+L DAI Y+ ++Q++++V E +Q
Sbjct: 318 ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
Query: 242 TKKR 245
KR
Sbjct: 378 IMKR 381
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 43/192 (22%), Positives = 93/192 (48%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ +L ++ P +K+ D+AS++G I ++KELQ+ V+VLE + ++
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 245 RTVESVVYVKKSQLVVSGXXXXXXXXX--XXXXXXXXDATLPEI-----------EARVS 291
+T+ + Q + +T E+ EA++S
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKIS 122
Query: 292 DKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTM 351
+V++R+ + G L K+IS LE L + + ++ + L ++ + E ++
Sbjct: 123 GSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI-GLECHLSL 181
Query: 352 KDLVKDIRLAFL 363
++L +++ +F+
Sbjct: 182 EELTLEVQKSFV 193
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 52/158 (32%), Positives = 80/158 (50%)
Query: 175 YPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
+P ++ ++MAER+RR++L+ R L +I+P + KMD+ S+LGD I YVKEL ER
Sbjct: 171 HPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTER 230
Query: 235 VKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKD 294
+K LEE+ T E + + + SG ++T ++E R S +
Sbjct: 231 IKTLEEEIGV-TPEELDLLNTMKDSSSGNNNEMLVR---------NSTKFDVENRGSG-N 279
Query: 295 VLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGN 332
I I C G+L +S LE+L L I V F +
Sbjct: 280 TRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSD 317
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 174 (66.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 33/78 (42%), Positives = 55/78 (70%)
Query: 168 NHGTKRSYPVTRTPAL-AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIR 226
N + S +T TP + H+M+ER+RREKL++ F+ L ++LP ++K+DKAS+L + I
Sbjct: 359 NIDDRGSVAITTTPGSNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETIT 418
Query: 227 YVKELQERVKVLEEQTKK 244
Y+K L++RVK LE +++
Sbjct: 419 YLKVLEKRVKELESSSRE 436
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 149 (57.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 27/63 (42%), Positives = 45/63 (71%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR+KL+ R L +++P + KMD+AS+LGDAI Y+KEL +++ L+ + +
Sbjct: 337 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSP 396
Query: 247 VES 249
S
Sbjct: 397 ATS 399
Score = 67 (28.6 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 284 PEIEARVSD-KDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDI 337
P +E R+ + + V I + C ++ GLL + +E L L + + F TLDI
Sbjct: 439 PRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNGFTLDI 493
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 169 (64.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 38/144 (26%), Positives = 77/144 (53%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE--QT 242
++H+M+ER+RREKL + F+ L +++P + K+DKAS+L + I Y+KEL++RV+ LE Q
Sbjct: 243 KNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQP 302
Query: 243 KKRTVESV---VYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSD-KDVLIR 298
R +E+ + V +G + + + D K++L+
Sbjct: 303 SPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNKELLLE 362
Query: 299 IHCEKQKGLLPKLISQLEMLHLSI 322
+ C+ ++ L+ ++ ++ + L +
Sbjct: 363 LQCQWKELLMTRVFDAIKGVSLDV 386
Score = 39 (18.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 9 LAELGMDEYNIIHQCHMESVADLFSSKQDI 38
+AE + +N + Q M+ + +L+S +++
Sbjct: 106 VAECESNAHNDLEQITMDDIGELYSLCEEL 135
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 168 (64.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 181 PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
P ++MAER+RR++L+ R L +++P + KMD+ S+LGD I YVKEL +R+K L+
Sbjct: 191 PGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQV 250
Query: 241 QTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIH 300
+ S S L ++ ++T E+E R + I +
Sbjct: 251 EAATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERR-ENGSTRIEMA 309
Query: 301 CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITII 340
C LLP ++ LE L + I + F + + + +
Sbjct: 310 CAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCL 349
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 170 (64.9 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 36/138 (26%), Positives = 76/138 (55%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
++H+++ER+RREKL++ F+ L +I+P + K+DKAS+L + I Y+K L++RVK LE ++
Sbjct: 391 KNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSEP 450
Query: 245 RTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQ 304
+ ++ + ++G + + V+DK VL+ + C +
Sbjct: 451 SHQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHH--HVNVTVTDKVVLLEVQCRWK 508
Query: 305 KGLLPKLISQLEMLHLSI 322
+ ++ ++ ++ L L +
Sbjct: 509 ELVMTRVFDAIKSLCLDV 526
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 166 (63.5 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 31/76 (40%), Positives = 52/76 (68%)
Query: 180 TPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
TP +H ++E+KRREKL++RF+ L +I+P + K+DK S+L D I Y+++LQ+RV+ LE
Sbjct: 399 TPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
Query: 240 EQTKKRTVESVVYVKK 255
+ E+ + + K
Sbjct: 459 SCRESADTETRITMMK 474
Score = 44 (20.5 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 15/65 (23%), Positives = 34/65 (52%)
Query: 289 RVSD--KDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL-KNA 345
R+S +V+I + C ++G+L +++ + L+L +++ G+ L +T+ K
Sbjct: 519 RISSLGNEVVIELRCAWREGILLEIMDVISDLNLD-SHSVQSSTGDGLLCLTVNCKHKGT 577
Query: 346 EFCTT 350
+ TT
Sbjct: 578 KIATT 582
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 126 (49.4 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 25/60 (41%), Positives = 44/60 (73%)
Query: 182 ALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVK-VLEE 240
A + +I ER RR++L+++ AL A++P + KMDKAS++ DAI ++++LQE + +L+E
Sbjct: 93 AASSKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDE 152
Score = 78 (32.5 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 284 PEIE-ARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL 342
P+++ ++V +K V + I C K +G + K+ +E L+L + + SV + + + +
Sbjct: 232 PQLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDGTIVHTMFVEV 291
Query: 343 KN 344
N
Sbjct: 292 TN 293
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 122 (48.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/61 (36%), Positives = 44/61 (72%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++PG +++ D+AS++G AI +V+EL++ ++ LE Q ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 245 R 245
R
Sbjct: 259 R 259
Score = 85 (35.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 283 LPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL 342
L ++E ++ D +I+I ++ G L K I+ LE LHLSI +T++ +T++ T++
Sbjct: 315 LADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNI-----TTMEQTVLYS 369
Query: 343 KNAEFCTTMKDLVKDI 358
N + + + +DI
Sbjct: 370 FNVKITSETRFTAEDI 385
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 121 (47.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR +++ L ++ P +K+ D+AS++G AI ++KELQ ++ LE Q K+
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKKR 62
Query: 245 RTVESVVYVKKSQLVVSG 262
R + + + SG
Sbjct: 63 RQQPQAHLISPASISASG 80
Score = 74 (31.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 22/88 (25%), Positives = 49/88 (55%)
Query: 280 DATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITI 339
++ + ++EAR+S +VL+R + + ++I+ LE LHL + + ++ +T+D T+
Sbjct: 134 NSPMADVEARISGANVLLRTLSRRAPPV--RIIALLESLHLEVLHLNI-----TTMDDTV 186
Query: 340 I---ALKNAEFC-TTMKDLVKDIRLAFL 363
+ LK C ++ DL ++ +F+
Sbjct: 187 LYSFVLKIGLDCHLSVDDLAMEVHQSFM 214
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 161 (61.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 42/138 (30%), Positives = 69/138 (50%)
Query: 181 PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
PA+ H+ AE++RREKL+ RF AL AI+P + +MDKAS+L DA+ Y++ L+ ++ LE
Sbjct: 245 PAVLS-HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLET 303
Query: 241 QTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIH 300
+ KK + + S S E++ ++ ++ +IR+
Sbjct: 304 EIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDL--EVQVKIVGEEAIIRVQ 361
Query: 301 CEKQKGLLPKLISQL-EM 317
E L+S L EM
Sbjct: 362 TENVNHPTSALMSALMEM 379
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 161 (61.7 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 48/168 (28%), Positives = 81/168 (48%)
Query: 164 VINPNHGTKRSYPVTRTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKAS 219
++ G KR R PA +D H+ AER RREKL+ RF AL A++P + KMDK S
Sbjct: 321 MLEKKKGKKRG----RKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTS 376
Query: 220 VLGDAIRYVKELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXX 279
+L DA+ Y+ EL+ + + +E +K +E ++ ++L
Sbjct: 377 LLEDAVCYINELKSKAENVE--LEKHAIE----IQFNELKEIAGQRNAIPSVCKYEEKAS 430
Query: 280 DATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
+ E++ SD D ++R+ K +L++ L L L + + S+
Sbjct: 431 EMMKIEVKIMESD-DAMVRVESRKDHHPGARLMNALMDLELEVNHASI 477
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 154 (59.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
H+ AER+RREKL++RF L A +P + +MDKAS+L DA+ Y+ EL+ RV+ LE + ++
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAEARR 152
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 159 (61.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR+KL+ R L +++P + KMD+AS+LGDAI Y+KEL +R+ L + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 247 VESVVYVKKS--QLVVSGXXXXXXXXXXX--XXXXXXDATLPEIEARVSD-KDVLIRIHC 301
S+ S L + +E R+ + + V I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 302 EKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKD 357
++ GLL + L+ L L + + F LD+ AE C ++++ D
Sbjct: 428 GRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVF-----RAEQCQEGQEILPD 478
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 143 (55.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
++MAER+RR++L+ R L +I+P + KMD+ S+LGDAI Y+KEL +++ L+E ++
Sbjct: 152 NLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQE 209
Score = 50 (22.7 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 285 EIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKN 344
E++ R + + I I C + GL+ +S LE L L I + F + +L + +
Sbjct: 233 EVDQR--EVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGE 290
Query: 345 AEFCTT 350
+ T
Sbjct: 291 QRYMVT 296
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 155 (59.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/149 (28%), Positives = 75/149 (50%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR++L+ R L +I+P + KMD+ S+LGDAI Y+KEL +++ L+++ ++
Sbjct: 179 NLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELG 238
Query: 247 VESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQKG 306
+ + K + G P+ E D+D + I C + G
Sbjct: 239 NSNNSHHSK----LFGDLKDLNANEPLVRNS------PKFEIDRRDEDTRVDICCSPKPG 288
Query: 307 LLPKLISQLEMLHLSITNTSVLPFGNSTL 335
LL ++ LE L L I + F + +L
Sbjct: 289 LLLSTVNTLETLGLEIEQCVISCFSDFSL 317
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 134 (52.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 163 TVINPNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLG 222
T N N GT++ T+T +++ER+RR ++ + AL +++P + KMDKAS++G
Sbjct: 115 TTTN-NDGTRK----TKTDRSRT--LISERRRRGRMKDKLYALRSLVPNITKMDKASIVG 167
Query: 223 DAIRYVKELQERVKVLE 239
DA+ YV+ELQ + K L+
Sbjct: 168 DAVLYVQELQSQAKKLK 184
Score = 58 (25.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 289 RVSDKDVLIRIHCEKQKGLLPKLISQLEML-HLSITNTSV 327
+V +K +R+ C K +G+ P L LE L + N+++
Sbjct: 231 QVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNL 270
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 151 (58.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKR 245
+H + E+KRREKL++RF+ L I+P + K+DK S+L D I Y++EL+ RV+ LE +
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST 500
Query: 246 TVES 249
E+
Sbjct: 501 DTET 504
Score = 47 (21.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/46 (23%), Positives = 27/46 (58%)
Query: 294 DVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITI 339
+V+I + C ++G+L +++ + LHL +++ G+ L +T+
Sbjct: 567 EVVIELRCAWREGVLLEIMDVISDLHLD-SHSVQSSTGDGLLCLTV 611
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 132 (51.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQ-ERVKVLEE 240
A +I+ ER RR KL+++ AL +++P + KMDKAS++ DAI Y++ LQ E ++L E
Sbjct: 91 ANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLRE 148
Score = 55 (24.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 11/69 (15%), Positives = 32/69 (46%)
Query: 288 ARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEF 347
+ V D+ +++ + C K++ + ++ LE L L + ++ + + + + +
Sbjct: 225 SEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMHTLFVEVDHMD- 283
Query: 348 CTTMKDLVK 356
MK +V+
Sbjct: 284 SVQMKQMVE 292
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 149 (57.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 49/167 (29%), Positives = 85/167 (50%)
Query: 171 TKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYV 228
TK + + + HI ER RR +++ +L +I+P +++ D+AS++G AI +V
Sbjct: 179 TKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFV 238
Query: 229 KELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEA 288
K L+++++ LE Q KR+ +S K Q+ ++ +IEA
Sbjct: 239 KILEQQLQSLEAQ--KRSQQSDD--NKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEA 294
Query: 289 RVSDKDVLIRIHCEKQKGLLPKLISQLE-----MLHLSIT---NTSV 327
V + V ++I C +++G L + I LE +LHL+IT NTSV
Sbjct: 295 TVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSV 341
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 146 (56.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 176 PVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERV 235
P R H+ AER+RREKL++RF L A +P + +MDKAS+L DA Y+ EL+ RV
Sbjct: 101 PGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARV 160
Query: 236 KVLEEQTKK 244
LE ++
Sbjct: 161 ARLESDARQ 169
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 146 (56.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 48/176 (27%), Positives = 83/176 (47%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++P ++ D+AS++G AI YVKEL+ +L+ K
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEH---ILQSMEPK 173
Query: 245 RT-VESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXD----ATLP-EIEARVSDKDVLIR 298
RT K S + G D ++ P EIE V++ I+
Sbjct: 174 RTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIK 233
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDL 354
I +K+ L KLI+ L+ L L++ + +V NS L + ++ T+ D+
Sbjct: 234 IMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDI 289
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 146 (56.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 44/172 (25%), Positives = 83/172 (48%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ +L +++P L++ D+AS++G AI ++KEL++ ++ LE + +K
Sbjct: 117 HIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRK 176
Query: 245 ----RTVESVVYVKKSQLVV--SGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIR 298
T ++ S L S E+EA V V ++
Sbjct: 177 DGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVSLK 236
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA--LKNAEFC 348
+ C++ K + K I +E L L+I + ++ +S+ D I + LK + C
Sbjct: 237 VRCKRGKRQILKAIVSIEELKLAILHLTI----SSSFDFVIYSFNLKMEDGC 284
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 43/197 (21%), Positives = 90/197 (45%)
Query: 162 ETVINPNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVL 221
+ V+ + +K + + T ++ +ERKRRE+++Q L A++P + K++K +
Sbjct: 240 DVVVQNANDSKANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIF 299
Query: 222 GDAIRYVKELQERVKVLEEQTKK-RTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXD 280
DA+ Y+ EL + LE++ K +E + Q ++ +
Sbjct: 300 SDAVDYINELLVEKQKLEDELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNE 359
Query: 281 ATLPEIEARVSDKDVLIRIHCE-KQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDI-T 338
+ E+ ++D LIR+ E KQ G +LI +++ L I + + + + +
Sbjct: 360 VKI-EVH-ETGERDFLIRVVQEHKQDGF-KRLIEAVDLCELEIIDVNFTRLDLTVMTVLN 416
Query: 339 IIALKNAEFCTTMKDLV 355
+ A K+ C ++DL+
Sbjct: 417 VKANKDGIACGILRDLL 433
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 118 (46.6 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
++ AER+RREKL R +AL + +P + M KAS++ DAI Y+ ELQ VK L E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLE 86
Score = 51 (23.0 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 16/76 (21%), Positives = 35/76 (46%)
Query: 289 RVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFC 348
++ ++ ++I EK+ G+ K + + L I + S L N + I+ +++ E C
Sbjct: 133 KIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDIS-LTTSNGAILISA-SVQTQELC 190
Query: 349 TTMKDLVKDIRLAFLK 364
+ KD L ++
Sbjct: 191 DV--EQTKDFLLEVMR 204
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 127 (49.8 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 182 ALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
A ++ H AER+RRE+++ L +ILP K DKAS+L + I++VKEL+ V+ E
Sbjct: 173 AASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISE 231
Score = 49 (22.3 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 301 CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITII 340
CE + LLP +I L+ + L + G ++ +
Sbjct: 265 CEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFV 304
Score = 37 (18.1 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 92 DRASADHSSPTPQPHFLNFDQKPISSNPNKQLYGN 126
D S S P P FDQ P S+ YG+
Sbjct: 67 DSVSPIWSLPPPTSIQPPFDQFPPPSSSPASFYGS 101
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 141 (54.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
H+++ERKRREKL+ F+AL A+LP K DK S+L A YVK L+ ++ LEE K R
Sbjct: 255 HMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEE--KNRE 312
Query: 247 VES 249
+E+
Sbjct: 313 LEA 315
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 123 (48.4 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 26/69 (37%), Positives = 44/69 (63%)
Query: 176 PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
P R ++ D + R+RRE++S++ L I+PG KMD AS+L +AIRY K L+ +
Sbjct: 111 PNRRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQ 170
Query: 235 VKVLEEQTK 243
V++L+ ++
Sbjct: 171 VRILQPHSQ 179
Score = 41 (19.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 69 QTSFDERPNKLLKTYSWKSTTTTDRASADHSSPTPQPHFLNFDQKP 114
++ + +P+ LL W D + +H++ PH L D P
Sbjct: 28 RSMMEPQPHHLLM--DWNKAN--DLLTQEHAAFLNDPHHLMLDPPP 69
Score = 37 (18.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 87 STTTTDRASADHSSPTPQPHFLNFD 111
S+ + S S PQPH L D
Sbjct: 17 SSKSRSNHSPKRSMMEPQPHHLLMD 41
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 140 (54.3 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
H+++ERKRREKL+ F+AL A+LP K DKAS+L A ++K L+ ++ LEE K R
Sbjct: 185 HMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEE--KNRE 242
Query: 247 VES 249
+E+
Sbjct: 243 LEA 245
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 114 (45.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 182 ALAQDHIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLE 239
A HI ER RR+++++ L +++P +K+ D+AS++G + Y+KELQ+ ++ LE
Sbjct: 129 AAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLE 188
Query: 240 -EQTKKRTVESVVYVKKS 256
++ +K + V+ + S
Sbjct: 189 AKKNRKAYADQVLSPRPS 206
Score = 67 (28.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 283 LPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNST-LDITIIA 341
+P++ + +++++ + G K+I+ LE L L I + S+ ++T L TI
Sbjct: 336 VPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKI 395
Query: 342 LKNAEFCTTMKDLVKDIRLAFL 363
E + ++LV++I+ FL
Sbjct: 396 GIECEL--SAEELVQEIQQTFL 415
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/176 (23%), Positives = 83/176 (47%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGL--KKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++P ++ D+AS++G AI Y+KEL+ ++ +E K
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 245 RTVESVV---YVKKSQLVVSGXXXXXXXXXXXXXXXXXDAT---LPEIEARVSDKDVLIR 298
T ++ K + SG A + EIE + + ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHASLK 246
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDL 354
I +K+ L KL+S ++ L L++ + +V +S L + ++ T++D+
Sbjct: 247 ILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDI 302
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 114 (45.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/67 (29%), Positives = 44/67 (65%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
H+ ER RR+++++ L +++P +K+ D+AS++G + Y+ ELQ+ ++ LE + ++
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQR 163
Query: 245 RTVESVV 251
+T V+
Sbjct: 164 KTYAEVL 170
Score = 64 (27.6 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 281 ATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITII 340
+ L ++E + S +VL++ K G + K+I+ LE L L I ++ + L+ I
Sbjct: 283 SALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTI 342
Query: 341 ALKNAEFCTTMKDLVKDIRLAF 362
+ E + ++L + I+ F
Sbjct: 343 KI-GIECQLSAEELAQQIQQTF 363
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 112 (44.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/63 (38%), Positives = 44/63 (69%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ L +++P +++ D+AS++G AI +VKEL+++++ LE Q K
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQ--K 149
Query: 245 RTV 247
RT+
Sbjct: 150 RTL 152
Score = 66 (28.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 283 LPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL 342
L +IE + + +R+ ++ G L K+I+ L+ L L++ + +V +L + +++
Sbjct: 258 LADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTL--DSLVLYTLSV 315
Query: 343 KNAEFC--TTMKDL 354
K E C TT+ D+
Sbjct: 316 KVEEGCSLTTVDDI 329
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 132 (51.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 176 PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
P R +++D +A R RRE++S+R L ++PG KMD AS+L +AI YVK L+++
Sbjct: 121 PKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQ 180
Query: 235 VKVLEEQ 241
V+ LEEQ
Sbjct: 181 VQSLEEQ 187
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 129 (50.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
AQ H ++E+KRR K++++ AL ++P K DKAS+L +AI Y+K+LQ +V+ L
Sbjct: 95 AQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
G K S R+ A A H +ERKRR+K++QR L ++P K DKAS+L + I Y+K
Sbjct: 202 GGKSSVSTKRSRAAAI-HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK 260
Query: 230 ELQERVKVLEEQTKKRTVESVVYVKKSQLVVS 261
+LQ +V ++ + + ++ QL +S
Sbjct: 261 QLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMS 292
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 138 (53.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++ AERKRR+KL+ L +++P + KMD+AS+LGDAI Y+ LQ++VK L+++ +
Sbjct: 286 NLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELEDNH 345
Query: 247 V 247
V
Sbjct: 346 V 346
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 176 PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
P R ++ D +A R RRE++S+R L ++PG KMD AS+L +AIRYVK L+ +
Sbjct: 118 PKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQ 177
Query: 235 VKVLEEQT 242
+++L T
Sbjct: 178 IRLLNNNT 185
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 25/68 (36%), Positives = 47/68 (69%)
Query: 171 TKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKE 230
T+ + P + A+ H ++E++RR +++++ AL +++P K DKAS+L DAI Y+K+
Sbjct: 21 TRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQ 80
Query: 231 LQERVKVL 238
LQ +V++L
Sbjct: 81 LQLQVQML 88
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 133 (51.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 164 VINPNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGD 223
V + +KR RT A A+ H ++ER+RR++++++ AL ++P K DKAS+L +
Sbjct: 211 VADETRPSKRPAAKRRTRA-AEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDE 269
Query: 224 AIRYVKELQERVKVL 238
AI Y+K LQ +V+++
Sbjct: 270 AIEYLKSLQMQVQIM 284
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 122 (48.0 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 172 KRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKEL 231
+R P TR A+ H +ER+RR++++++ AL +LP K DK S+L +AI Y+K L
Sbjct: 4 RRPTP-TRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSL 62
Query: 232 QERVKVL 238
Q ++++L
Sbjct: 63 QLQLQML 69
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 127 (49.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 164 VINPNHGTKRSY--PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASV 220
V+ P H S P + +++D +A R RRE++S+R L ++PG KMD AS+
Sbjct: 104 VMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 163
Query: 221 LGDAIRYVKELQERVKVLEE 240
L +AI YVK L+++V+ LEE
Sbjct: 164 LDEAIHYVKFLKKQVQSLEE 183
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 132 (51.5 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 27/71 (38%), Positives = 49/71 (69%)
Query: 168 NHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
N ++RS R+ A A+ H ++ER+RR+++++R AL ++P + DKAS+L +AI Y
Sbjct: 243 NKSSQRSGSTRRSRA-AEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDY 301
Query: 228 VKELQERVKVL 238
+K LQ +++V+
Sbjct: 302 LKSLQMQLQVM 312
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 168 NHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
N +RS R+ A A+ H ++ER+RR+++++R AL ++P K DKAS+L +AI Y
Sbjct: 244 NKSNQRSGSNRRSRA-AEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDY 302
Query: 228 VKELQERVKVL 238
+K LQ +++V+
Sbjct: 303 LKSLQLQLQVM 313
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 162 ETVINPNHGTKRSYPVT-RTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKAS 219
E I GT+ ++ T R + A D H ++ER+RRE++++R L +LP +K DK S
Sbjct: 335 EETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVS 394
Query: 220 VLGDAIRYVKELQERVKVL 238
+L D I YVK LQ +++++
Sbjct: 395 MLEDVIEYVKSLQLQIQMM 413
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 106 (42.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/63 (38%), Positives = 42/63 (66%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ L +++P + + D+AS++G AI +VKEL++ ++ LE Q K
Sbjct: 97 HIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQ--K 154
Query: 245 RTV 247
RT+
Sbjct: 155 RTL 157
Score = 62 (26.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 281 ATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTL 335
A + +IE + + IR+ ++ G L K+++ L+ L L++ + +V G+ L
Sbjct: 232 AGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLAL 286
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 125 (49.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 28/81 (34%), Positives = 54/81 (66%)
Query: 162 ETVINPNHGTKRSYPVTRTPA----LAQDHIMAERKRREKLSQRFIALSAILPGLKKMDK 217
E V++ +K S P +R+ + A+ H ++E++RR +++++ AL +++P K DK
Sbjct: 174 EAVVDEAPSSK-SGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDK 232
Query: 218 ASVLGDAIRYVKELQERVKVL 238
AS+L +AI Y+K+LQ +V++L
Sbjct: 233 ASMLDEAIEYLKQLQLQVQML 253
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 72 FDERPNKLLKTYSWKSTTTTDRASADHSSPTPQPHFLNFDQKPISSNP 119
FD R + L YS +TTTT H S PH N + +S +P
Sbjct: 57 FD-RSSPLPSYYSPATTTTTASLIGVHGSG--DPHADN-SRSLVSHHP 100
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 178 TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKV 237
T+ A+ H ++ERKRR+++++R AL ++P K DKAS+L +AI Y+K LQ ++++
Sbjct: 280 TKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQM 339
Query: 238 L 238
+
Sbjct: 340 M 340
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/55 (41%), Positives = 42/55 (76%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
A+ H ++E++RR K++++ AL +++P K DKAS+L +AI Y+K+LQ +V++L
Sbjct: 105 AEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/65 (50%), Positives = 41/65 (63%)
Query: 176 PVTRTP-ALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQE 233
P TR A D H +AER RREK+S+R L ++P K DKAS+L + I YVK LQ
Sbjct: 237 PRTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQL 296
Query: 234 RVKVL 238
+VKVL
Sbjct: 297 QVKVL 301
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 126 (49.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 170 GTKRSYPVTRTPALAQ-----D-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGD 223
GT + P +RT A+ D H +AER RRE++++R AL ++P K DKAS+L +
Sbjct: 126 GTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 185
Query: 224 AIRYVKELQERVKVL 238
I YVK LQ +VKVL
Sbjct: 186 IIDYVKFLQLQVKVL 200
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/70 (38%), Positives = 42/70 (60%)
Query: 169 HGTKRSYPVT--RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIR 226
HGT+ + T + A+ H +AER+RREK++++ L ++P K K S L DAI
Sbjct: 240 HGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIE 299
Query: 227 YVKELQERVK 236
YVK LQ +++
Sbjct: 300 YVKSLQSQIQ 309
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 24/65 (36%), Positives = 45/65 (69%)
Query: 178 TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKV 237
T+ A+ H ++ER+RR++++++ AL ++P K+DKAS+L +AI Y+K LQ +V++
Sbjct: 308 TKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQM 367
Query: 238 LEEQT 242
+ T
Sbjct: 368 MSMGT 372
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 191 ERKRREKLSQRFIALSAIL-PG-LKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTVE 248
ER RREKL++RF+ LS++L PG K DK ++L DAIR + +L++ LEE T ++ +E
Sbjct: 139 ERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE-TNQKLLE 197
Query: 249 SVVYVK--KSQL 258
+ +K K++L
Sbjct: 198 EIKSLKAEKNEL 209
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 22/55 (40%), Positives = 42/55 (76%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
A+ H ++ER+RR++++++ AL ++P K+DKAS+L +AI Y+K LQ +V+++
Sbjct: 345 AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 169 HGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYV 228
H R PVT+ + H + ERKRR++ +++ AL +LP K DKAS+L +AI+Y+
Sbjct: 217 HARTRK-PVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYM 275
Query: 229 KELQERVKVL 238
+ LQ +V+++
Sbjct: 276 RTLQLQVQMM 285
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 120 (47.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 176 PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
P R +++D +A R RRE++S+R L ++PG KMD AS+L +AI YVK L+ +
Sbjct: 140 PKRRNVRISKDPQSVAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQ 199
Query: 235 VKVLE 239
V+ LE
Sbjct: 200 VQSLE 204
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H +AER RRE++++R +L ++P K DKAS+L + I YV+ LQ +VKVL
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
H+M+ERKRREKL+ F L ++LP K DK +VL +A +Y+K L+ + LE K
Sbjct: 267 HMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELEGTNTK 324
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 118 (46.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 180 TPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
+PA+ + H AERKRR++++ L ++P +MDKA++LG+ +R+V+EL+ R
Sbjct: 17 SPAV-RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 165 INPNHGTKRSYPVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGD 223
+N + T R P R ++ D +A R RRE++S+R L ++PG KMD AS+L +
Sbjct: 140 VNIDPETVRP-PKRRNVRISTDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDE 198
Query: 224 AIRYVKELQERVKVLE 239
AI YVK L+ +V+ LE
Sbjct: 199 AIHYVKFLKTQVQSLE 214
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 117 (46.2 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 189 MAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
+A R RRE++SQR AL ++PG ++D AS+L +AIRYVK L+ V+ LE
Sbjct: 127 VAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGHVQSLE 177
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 112 (44.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 180 TPALAQDHIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKV 237
TP A HI ER RR+++++ L +++P +K+ D+AS++G + Y+KELQ+ +
Sbjct: 134 TPKTA--HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHS 191
Query: 238 LEEQTKKRTV 247
LE + K+R V
Sbjct: 192 LEAK-KQRKV 200
Score = 50 (22.7 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 14/80 (17%), Positives = 40/80 (50%)
Query: 283 LPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL 342
LP+++ + +++++ ++ G K+I+ LE L I + + ++ ++ + +
Sbjct: 317 LPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKI 376
Query: 343 KNAEFCTTMKDLVKDIRLAF 362
E + ++LV+ I+ F
Sbjct: 377 -GIECELSAEELVQVIQQTF 395
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 120 (47.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H +AER RRE++++R +L ++P K DKAS+L + I YVK LQ +VKVL
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 178 TRTPALAQ-DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVK 236
T P+ Q H+++ERKRREKL++ F AL ++LP K DKASVL A + LQ +
Sbjct: 280 TSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEIS 339
Query: 237 VLEEQTKKRTVES 249
L E + R VE+
Sbjct: 340 KLLE--RNREVEA 350
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 162 ETVINPNHGTKRSYPVT--RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKAS 219
ET + N GT+ + T + A H ++ER+RR+K+++ AL +LP K D++S
Sbjct: 256 ETNVE-NQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSS 314
Query: 220 VLGDAIRYVKELQERVKV 237
+L D I YVK LQ ++++
Sbjct: 315 MLDDVIEYVKSLQSQIQM 332
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKM-DKASVLGDAIRYVKELQERVKVL 238
H +AER RREK+S++ AL I+PG K+ KA VL + I Y++ LQ +V+ L
Sbjct: 164 HSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQ 232
+ H AERKRRE+++ L ++P +MDKA++LG+ +RYV++L+
Sbjct: 30 RSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 167 PNHGTKRSYPVTRTP-ALAQD-HIMAERKRREKLSQRFIALSAILPGLKKM-DKASVLGD 223
P K+ Y R A D H +AER RREK+S+R L ++PG K+ KASVL +
Sbjct: 125 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 184
Query: 224 AIRYVKELQERVKVL 238
I Y++ LQ +V+ L
Sbjct: 185 IINYIQALQRQVEFL 199
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 122 (48.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
H +AER RREK+S R L ++P K +KAS+L + I YVK LQ +VKVL ++
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVLS-MSRLGA 383
Query: 247 VESVV 251
E+VV
Sbjct: 384 AEAVV 388
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 174 SYPVTRTPALAQDHIMA 190
+YP T +PA ++D + A
Sbjct: 5 AYPFTPSPAWSRDAVFA 21
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 101 PTPQPHFLNFD 111
P+ QPH LN D
Sbjct: 204 PSSQPHHLNDD 214
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 40/171 (23%), Positives = 77/171 (45%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++ +L +++P + + D+A+V+G AI YVK+L++++ L+ +
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 245 RTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHCEKQ 304
R+ V V + S E A V V +R+ +
Sbjct: 179 RS--GVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEATAAVGGH-VRVRVAGRRW 235
Query: 305 KGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLV 355
G L + ++ +E L L++ + +V G+ + + LK + TT+ L+
Sbjct: 236 TGRLVRAVAAMEDLRLTVLHLAVTSVGHDAV-VYCFNLK-VKTTTTLHHLL 284
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 167 PNHGTKRSYPVTRTP-ALAQD-HIMAERKRREKLSQRFIALSAILPGLKKM-DKASVLGD 223
P K+ Y R A D H +AER RREK+S+R L ++PG K+ KASVL +
Sbjct: 117 PPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDE 176
Query: 224 AIRYVKELQERVKVL 238
I Y++ LQ +V+ +
Sbjct: 177 IINYIQSLQHQVEFM 191
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQ 241
++ AER+RR +L+ AL A++P + KM K + L DAI ++K LQ V L+ Q
Sbjct: 66 NLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQ 120
>TAIR|locus:2158392 [details] [associations]
symbol:BHLH92 "AT5G43650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB016875 EMBL:AY065390 EMBL:AY096718 IPI:IPI00529613
RefSeq:NP_199178.1 UniGene:At.28504 ProteinModelPortal:Q9FIX5
SMR:Q9FIX5 PRIDE:Q9FIX5 EnsemblPlants:AT5G43650.1 GeneID:834385
KEGG:ath:AT5G43650 TAIR:At5g43650 eggNOG:NOG311504
HOGENOM:HOG000090799 InParanoid:Q9FIX5 OMA:QSYLALH PhylomeDB:Q9FIX5
ProtClustDB:CLSN2686830 Genevestigator:Q9FIX5 Uniprot:Q9FIX5
Length = 247
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAI-------RYVKELQERVKVLE 239
H++ ER RREK Q ++AL ++LP K DK S++ A+ R KEL R+KV+E
Sbjct: 90 HMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAVDEIAKLQRLKKELVRRIKVIE 149
Query: 240 EQTKK 244
E++ K
Sbjct: 150 EKSAK 154
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 165 INPNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDA 224
+ P R R H +AER RRE++++R AL ++P K D+A++L +
Sbjct: 122 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEI 181
Query: 225 IRYVKELQERVKVL 238
+ YVK L+ +VKVL
Sbjct: 182 LDYVKFLRLQVKVL 195
>UNIPROTKB|Q7XZF8 [details] [associations]
symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
Length = 268
Score = 100 (40.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 179 RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
R A +++H AE++RRE++ L A+L K+DKAS+L A+ V++L++R+ +
Sbjct: 63 RALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKAVERVRDLKQRMAGI 122
Query: 239 EE 240
E
Sbjct: 123 GE 124
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 301 CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA 341
C+ + LLP+LI L L L + G ++ ++A
Sbjct: 164 CDDRCDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLA 204
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 39/185 (21%), Positives = 70/185 (37%)
Query: 171 TKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKE 230
T R + A ++ H AER+RR++++ L ++LP K DKAS+L + I +VKE
Sbjct: 94 TAREIMDAKALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKE 153
Query: 231 LQERVKVLEEQTKKRTVESVVYVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARV 290
L+ + + +V DA + + E ++
Sbjct: 154 LKRQTTAIAAAAAAGDYHGNDEDDDDAVVGRRSAAAQQLLPTEADELAVDAAV-DAEGKL 212
Query: 291 SDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIAL--KNAEFC 348
V + CE + L+P + L L L + G + +I + + C
Sbjct: 213 V---VRASLCCEDRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLITADEQQQQHC 269
Query: 349 TTMKD 353
+ D
Sbjct: 270 DDVDD 274
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 176 PVTRTPALAQD-HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
P + ++ D +A R+RRE++S++ L ++PG KMD AS+L +A Y+K L+ +
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 327
Query: 235 VKVLEEQTKK 244
VK LE K
Sbjct: 328 VKALENLRPK 337
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 114 (45.2 bits), Expect = 0.00038, P = 0.00038
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMD-KASVLGDAIRYVKELQERVKVLEEQTKKR 245
H +AER RREK+S+R L ++PG K+ KA +L + I YV+ LQ +V+ L K
Sbjct: 147 HSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLS--MKLT 204
Query: 246 TVESVVY 252
++ VVY
Sbjct: 205 SISPVVY 211
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 104 (41.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQ 241
HI ER RR +++Q L +++P K D+AS++G AI ++KEL+ ++ LE Q
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQ 146
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 308 LPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFC 348
L KL++ L+ L LSI + SV N I I+ K E C
Sbjct: 242 LSKLVASLQSLSLSILHLSVTTLDNYA--IYSISAKVEESC 280
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 113 (44.8 bits), Expect = 0.00041, P = 0.00041
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 179 RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
R P A+ H + E++RR +++++F L ++PG K ++S L I Y+K LQ++++ +
Sbjct: 149 RNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTIHYMKSLQQQLQAM 208
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
Identities = 40/142 (28%), Positives = 64/142 (45%)
Query: 101 PTPQPHFLNFDQKP-ISS---NPNKQLYGNLNMYSCSLKPKVEAXXXXXXXXXXXXXXXX 156
P P PH F Q+ +SS +P +Q Y +Y+ + P ++
Sbjct: 62 PPPLPHQNLFIQEDEMSSWPHHPLRQDYLCSELYASTPAPHPQSSVSLAPPPPKPPSSAP 121
Query: 157 XXQNYETVINPN-HGTKRSYPVT--RTPALAQDHIMAERKRREKLSQRFIALSAILPGLK 213
Q P GT+ + T + A+ H +AER+RREK+++R L ++P
Sbjct: 122 YGQIIAPRSAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCN 181
Query: 214 KMDKASVLGDAIRYVKELQERV 235
K K S+L D I YVK L+ ++
Sbjct: 182 KSTKVSMLEDVIEYVKSLEMQI 203
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 111 (44.1 bits), Expect = 0.00044, P = 0.00044
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 164 VINPNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGD 223
V N + KR R A + A RKRRE+++ R L +++P K+D +++L D
Sbjct: 121 VSNTSKSLKRKAKANRGIASDPQSLYA-RKRRERINDRLKTLQSLVPNGTKVDISTMLED 179
Query: 224 AIRYVKELQERVKVLEEQ 241
A+ YVK LQ ++K+L +
Sbjct: 180 AVHYVKFLQLQIKLLSSE 197
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 191 ERKRREKLSQRFIALSAIL-PG-LKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTVE 248
E+ RREKL+ +F+ LS++L PG K DK+++L DAIR V +L+ L+E T ++ +E
Sbjct: 171 EKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQE-TNQKLLE 229
Query: 249 SVVYVK--KSQL 258
+ +K K++L
Sbjct: 230 EIKSLKADKNEL 241
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 112 (44.5 bits), Expect = 0.00049, P = 0.00049
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 177 VTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
+ + +L++ H +AE++RR++++ AL ++P K+DKA++L I VKEL+++
Sbjct: 57 IEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQK 114
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 23/73 (31%), Positives = 48/73 (65%)
Query: 189 MAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE-EQTKKRTV 247
+A RKRR +++++ L ++PG +K + A + A +YVK LQ ++++L+ +QTK +T+
Sbjct: 141 IAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKMQTL 200
Query: 248 ESVVYVKKSQLVV 260
+S ++ Q ++
Sbjct: 201 DSSKVGREMQFLL 213
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 114 (45.2 bits), Expect = 0.00054, P = 0.00054
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 182 ALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
A ++ H AER+RRE+++ L +ILP K DKAS+L + I+++KEL+ + + +
Sbjct: 131 AASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITD 189
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00054
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 182 ALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
A ++ H AER+RR++++ L ++LP K DKAS+L + I +VKEL+ + + E
Sbjct: 120 AASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMME 178
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 113 (44.8 bits), Expect = 0.00057, P = 0.00057
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H +AER RRE++++R AL ++P + K D+A+++ + + YVK L+ +VKVL
Sbjct: 157 HSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 208
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 170 GTKRSYPVTRTPA--LAQDHIMAERKRREKLSQRFIALSAILPGLKKMD-KASVLGDAIR 226
GTK Y R H +AER RR+K+S+R L ++PG K+ KA +L + I
Sbjct: 139 GTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIIN 198
Query: 227 YVKELQERVKVL 238
YV+ LQ +V+ L
Sbjct: 199 YVQSLQRQVEFL 210
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 112 (44.5 bits), Expect = 0.00072, P = 0.00072
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMD-KASVLGDAIRYVKELQERVKVL 238
H +AER RREK+S++ L I+PG K+ KA +L + I YV+ LQ++V+ L
Sbjct: 152 HSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 171 TKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKE 230
TKR +P ++ L QD RK EK S L ++P + ++DK S+L + I+Y++E
Sbjct: 327 TKRMFP-SQNSGLNQDDPSDRRKENEKFS----VLRTMVPTVNEVDKESILNNTIKYLQE 381
Query: 231 LQERVKVLEE--------QTKKRTVE----SVVYVKKSQLVVSGXXXXXXXXXXXXXXXX 278
L+ RV+ LE + +++T E SV+ + S
Sbjct: 382 LEARVEELESCMGSVNFVERQRKTTENLNDSVLIEETSGNYDDSTKIDDNSGETEQVTVF 441
Query: 279 XDATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHL 320
D T + ++ + +V+I + C + ++ ++ L LH+
Sbjct: 442 RDKT--HLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHM 481
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 191 ERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERV---KVLEEQ--TKKR 245
ER+RR RF L ++P K D+AS++G+AI Y+KEL + K+L E+ K+R
Sbjct: 221 ERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEFKLLVEKKRVKQR 280
Query: 246 TVES--VV--YVKKSQLVVSGXXXXXXXXXXXXXXXXXDATLPEIEARVSDKDVLIRIHC 301
E VV K VV + +++ R+ D +V I+I
Sbjct: 281 NREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTDVDVRIIDDEVTIKIVQ 340
Query: 302 EKQKGLL---PKLISQLEM-LH 319
+K+ L K++ QLE+ LH
Sbjct: 341 KKKINCLLFVSKVVDQLELDLH 362
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H +ER+RR++++QR L +LP K DK S+L D I ++K+LQ +V+ +
Sbjct: 171 HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFM 222
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 191 ERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
ER+RRE+L+ +F L + P K D+AS++GDAI Y+ EL VK L+
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELK 318
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 108 (43.1 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++P +++ D+AS++G AI YVKE+++ ++ LE
Sbjct: 142 HIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEAHRHA 201
Query: 245 R 245
R
Sbjct: 202 R 202
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 14/76 (18%), Positives = 40/76 (52%)
Query: 281 ATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITII 340
+++ +IE + + +++ ++ L ++++ L+ L++ + +V G+ L +
Sbjct: 266 SSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVASAGHMAL--YSL 323
Query: 341 ALKNAEFC--TTMKDL 354
+LK E C T++ D+
Sbjct: 324 SLKVEEDCQLTSVDDI 339
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 366 311 0.00080 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 118
No. of states in DFA: 605 (64 KB)
Total size of DFA: 202 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.38u 0.09s 25.47t Elapsed: 00:00:01
Total cpu time: 25.39u 0.09s 25.48t Elapsed: 00:00:01
Start: Sat May 11 13:47:33 2013 End: Sat May 11 13:47:34 2013
WARNINGS ISSUED: 1