BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037441
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 213/363 (58%), Gaps = 40/363 (11%)
Query: 1 MDASSAKWLAELGMDEYNIIHQCHMESVADLFSSKQDITAALGGNLKQSLSTSESYSSYP 60
M S +W +E ++E +II Q HM S+ Q I S +T
Sbjct: 1 MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQEAQYI-------FPHSFTT-------- 45
Query: 61 NNNNNGKSQTSFDERPNKLLKTYSWKSTTTTDRASADHSSPTPQPHFLNFDQKPISSNPN 120
NN+ + +P K+L+T T + + H P +PH ++ + S +
Sbjct: 46 --NNDPSYDDLIEMKPPKILET--------TYISPSSHLPPNSKPHHIH--RHSSSRILS 93
Query: 121 KQLYGNLNMYSCSLKPKVEAPPSTGNTTSPPPFPPLGSQNYETVINPNHGTKRSYPVTRT 180
+ YG+ +M + E P+ N+ P + ++ GTKR+ P +R
Sbjct: 94 FEDYGSNDM-------EHEYSPTYLNSIFSPKLEAQVQPHQKSDEFNRKGTKRAQPFSRN 146
Query: 181 PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
+ AQDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDA++++K LQERV LEE
Sbjct: 147 QSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEE 206
Query: 241 QTKKRTVESVVYVKKSQLVVSGTDDE-SSSCDDNSEISTSDATLPEIEARVSDKDVLIRI 299
Q K+R +ES+V VKKS+L++ + SSSC+D SD LPEIE R SD+DVLI+I
Sbjct: 207 QKKERRLESMVLVKKSKLILDDNNQSFSSSCEDG----FSDLDLPEIEVRFSDEDVLIKI 262
Query: 300 HCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKDIR 359
CEKQKG L K+++++E LH+ ITN+SVL FG TLDITIIA K ++F T+ D+VK +R
Sbjct: 263 LCEKQKGHLAKIMAEIEKLHILITNSSVLNFG-PTLDITIIAKKESDFDMTLMDVVKSLR 321
Query: 360 LAF 362
A
Sbjct: 322 SAL 324
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
GTKR+ +TR+ + AQDHI+AERKRREKL+QRF+ALSA++PGLKKMDKASVLGDAI+++K
Sbjct: 110 GTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIK 169
Query: 230 ELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEAR 289
LQE VK EEQ K++T+ESVV VKKS LV+ SSS + ++S + LPEIE R
Sbjct: 170 YLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVR 229
Query: 290 VSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCT 349
VS KDVLI+I CEKQKG + K++ ++E L LSITN++VLPFG T DI+IIA KN F
Sbjct: 230 VSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFG-PTFDISIIAQKNNNFDM 288
Query: 350 TMKDLVKDIRLAFLKL 365
++D+VK++ KL
Sbjct: 289 KIEDVVKNLSFGLSKL 304
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 9/200 (4%)
Query: 169 HGTKRSYPV--TRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIR 226
GTKR TR+P LA++H++AERKRREKLS++FIALSA+LPGLKK DK ++L DAI
Sbjct: 100 RGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 227 YVKELQERVKVL-EEQTKKRTVESVVYVKKSQLVVSGTDDESS-SCDDNSEISTSDATLP 284
+K+LQE+++ L EE+ R +ES++ VKKS++ D+E + SC + I D LP
Sbjct: 160 RMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFF---DEEPNLSCSPSVHIEF-DQALP 215
Query: 285 EIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKN 344
EIEA++S D+LIRI CEK KG + +++ +E L I N+ VLPFG+STLDIT++A +
Sbjct: 216 EIEAKISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMD 275
Query: 345 AEF-CTTMKDLVKDIRLAFL 363
+F + +KDLV+++RLA +
Sbjct: 276 KDFSMSILKDLVRNLRLAMV 295
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 139/207 (67%), Gaps = 14/207 (6%)
Query: 170 GTKRSYPVT----RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAI 225
G+KR V R P L ++H++AERKRR+KL++R IALSA+LPGLKK DKA+VL DAI
Sbjct: 112 GSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAI 171
Query: 226 RYVKELQERVKVLEEQ--TKKRTVESVVYVKKSQLVVSGTDDESSSCDDN--------SE 275
+++K+LQERVK LEE+ K+ +S++ VK+SQ+ + SS E
Sbjct: 172 KHLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDE 231
Query: 276 ISTSDATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTL 335
+S T+P IEARVSD+D+LIR+HCEK KG + K++S LE L + N+ LPFGNSTL
Sbjct: 232 VSIFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTL 291
Query: 336 DITIIALKNAEFCTTMKDLVKDIRLAF 362
ITI+ + +F ++++VK+IR+A
Sbjct: 292 VITILTKMDNKFSRPVEEVVKNIRVAL 318
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 95/160 (59%), Gaps = 8/160 (5%)
Query: 172 KRSYPVTRTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
KR R PA ++ H+ AER+RREKL+QRF AL A++P + KMDKAS+LGDAI Y
Sbjct: 434 KRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAY 493
Query: 228 VKELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIE 287
+ EL + KV++ +++K +++ +++ +L ++G +S D +S S+ EIE
Sbjct: 494 INEL--KSKVVKTESEKLQIKN--QLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIE 549
Query: 288 ARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
++ D +IR+ K+ +L+S L L L + + S+
Sbjct: 550 VKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASM 589
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 27/132 (20%)
Query: 172 KRSYPVTRTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRY 227
KR R PA ++ H+ AER+RREKL+QRF AL +++P + KMDKAS+LGDAI Y
Sbjct: 377 KRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISY 436
Query: 228 VKELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIE 287
+KELQE+VK++E++ GTD S +++ I+ ++ PE++
Sbjct: 437 IKELQEKVKIMEDER------------------VGTD---KSLSESNTITVEES--PEVD 473
Query: 288 ARVSDKDVLIRI 299
+ +++V++R+
Sbjct: 474 IQAMNEEVVVRV 485
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 179 RTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
R PA ++ H+ AER+RREKL+QRF +L A++P + KMDKAS+LGDAI Y+ EL+ +
Sbjct: 405 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSK 464
Query: 235 VKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIE--ARVSD 292
++ E + K ++ + V + + SS D ++ + L E+E ++
Sbjct: 465 LQKAE--SDKEELQKQIDVMNKE-----AGNAKSSVKDRKCLNQESSVLIEMEVDVKIIG 517
Query: 293 KDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEF 347
D +IRI C K+ K + L+ L L + + S+ + + + + N F
Sbjct: 518 WDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGNQFF 572
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 179 RTPALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQER 234
R PA ++ H+ AER+RREKL+QRF +L A++P + KMDKAS+LGDAI Y+ EL+ +
Sbjct: 404 RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSK 463
Query: 235 VKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKD 294
++ E K+ + + + K G + +++ ST+ + EI+ ++ D
Sbjct: 464 LQQAESD-KEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWD 522
Query: 295 VLIRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
V+IR+ C K+ + + L+ L L + + S+
Sbjct: 523 VMIRVQCGKKDHPGARFMEALKELDLEVNHASL 555
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 20/156 (12%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE--EQT 242
++H+M+ERKRREKL++ F+ L ++LP + +++KAS+L + I Y+KELQ RV+ LE +
Sbjct: 415 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREP 474
Query: 243 KKRTVESVVY------------VKKSQLVVSGTDDESSSCD-DNSE---ISTSDATLPEI 286
R E+ V+K V +G+ +S D+ E + T DA +
Sbjct: 475 ASRPSETTTRLITRPSRGNNESVRKE--VCAGSKRKSPELGRDDVERPPVLTMDAGTSNV 532
Query: 287 EARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSI 322
VSDKDVL+ + C ++ L+ ++ ++ LHL +
Sbjct: 533 TVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDV 568
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 88/156 (56%), Gaps = 20/156 (12%)
Query: 185 QDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE--EQT 242
++H+M+ERKRREKL++ F+ L ++LP + +++KAS+L + I Y+KELQ RV+ LE +
Sbjct: 417 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREP 476
Query: 243 KKRTVESVVY------------VKKSQLVVSGTDDESSSCD-DNSE---ISTSDATLPEI 286
R E+ V+K V +G+ +S D+ E + T DA +
Sbjct: 477 ASRPSETTTRLITRPSRGNNESVRKE--VCAGSKRKSPELGRDDVERPPVLTMDAGSSNV 534
Query: 287 EARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSI 322
VSDKDVL+ + C ++ L+ ++ ++ LHL +
Sbjct: 535 TVTVSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDV 570
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 37/154 (24%)
Query: 179 RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
R P H++AER+RREKL+++FI L +++P + KMDK S+LGD I YV L++RV L
Sbjct: 356 RLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 239 E----EQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKD 294
E EQ KRT +C T E+E + + D
Sbjct: 416 ENTHHEQQHKRT---------------------RTCKRK--------TSEEVEVSIIEND 446
Query: 295 VLIRIHCEKQKGLLPKLISQLEMLH-LSITNTSV 327
VL+ + CE + GLL + L++LH L I T+V
Sbjct: 447 VLLEMRCEYRDGLLLDI---LQVLHELGIETTAV 477
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 31/175 (17%)
Query: 157 GSQNYETVINPNHGTKRSYPVTRTPA----LAQDHIMAERKRREKLSQRFIALSAILPGL 212
G + + V G R R PA A +H+ AER+RREKL+QRF AL +++P +
Sbjct: 400 GGEWADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNI 459
Query: 213 KKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDD 272
KMDKAS+LGDA+ Y+ EL ++KV+E + ++ S
Sbjct: 460 SKMDKASLLGDAVSYINELHAKLKVMEAERERLGYSS----------------------- 496
Query: 273 NSEISTSDATLPEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
N IS +I + S +DV +RI+C + ++ E + + N+++
Sbjct: 497 NPPISLDS----DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNL 547
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 88/161 (54%), Gaps = 17/161 (10%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR+KL+ R AL +++P + K+D+AS+LGDAI YVKELQ K L+++ ++ +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
Query: 247 -VESVVYVKKSQLVVSGTD----DESSSCDDNSEISTSDATL-----------PEIE-AR 289
E + + ++GT SC+ N D L P+++ A+
Sbjct: 375 ETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQ 434
Query: 290 VSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPF 330
+ ++ +++ CE + G +L+ L+ L L +TN + +
Sbjct: 435 LDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRY 475
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 30/184 (16%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKR- 245
++MAER+RR+KL+ R L +++P + KMD+AS+LGDAI Y+KEL +R+ L + +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTP 327
Query: 246 -----------TVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSD-K 293
T +++ Y K +L S S + + P +E R+ + K
Sbjct: 328 PSSSSLHPLTPTPQTLSYRVKEELCPS------------SSLPSPKGQQPRVEVRLREGK 375
Query: 294 DVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKD 353
V I + C ++ GLL + L+ L L + + F LD+ AE C D
Sbjct: 376 AVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVF-----RAEQCQEDHD 430
Query: 354 LVKD 357
++ +
Sbjct: 431 VLPE 434
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 12/177 (6%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR+KL+ R L +++P + KMD+AS+LGDAI Y+KEL +R+ L + +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 247 VESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPE-----IEARVSD-KDVLIRIH 300
S+ S ++ T ++ SC E+ S P+ +E R+ + + V I +
Sbjct: 368 PGSLPPTSSSFHPLTPT-PQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMF 426
Query: 301 CEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKD 357
C ++ GLL + L+ L L + + F LD+ AE C ++++ D
Sbjct: 427 CGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVF-----RAEQCQEGQEILPD 478
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 88/155 (56%), Gaps = 15/155 (9%)
Query: 180 TPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
TP +H ++E+KRREKL++RF+ L +I+P + K+DK S+L D I Y+++LQ+RV+ LE
Sbjct: 399 TPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
Query: 240 EQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIE------ARVSD- 292
+ E+ + + K + + S++C NS+ SD + E E A ++D
Sbjct: 459 SCRESADTETRITMMKRKKPDDEEERASANC-MNSKRKGSDVNVGEDEPADIGYAGLTDN 517
Query: 293 -------KDVLIRIHCEKQKGLLPKLISQLEMLHL 320
+V+I + C ++G+L +++ + L+L
Sbjct: 518 LRISSLGNEVVIELRCAWREGILLEIMDVISDLNL 552
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 100/192 (52%), Gaps = 25/192 (13%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++PG +++ D+AS++G AI +V+EL++ ++ LE Q ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 245 RTVESV-----------------VYVKKSQLVVSGTDDESSSCDD-NSEISTSDATLPEI 286
R + V + L+++G E E + + + L ++
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADV 318
Query: 287 EARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAE 346
E ++ D +I+I ++ G L K I+ LE LHLSI +T++ +T++ T++ N +
Sbjct: 319 EVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNI-----TTMEQTVLYSFNVK 373
Query: 347 FCTTMKDLVKDI 358
+ + +DI
Sbjct: 374 ITSETRFTAEDI 385
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL--EEQ 241
A +H+ AER+RREKL+QRF AL A++P + KMDKAS+L DAI Y+ ++Q++++V E+Q
Sbjct: 318 ALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQ 377
Query: 242 TKKR 245
KR
Sbjct: 378 IMKR 381
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 86/147 (58%), Gaps = 16/147 (10%)
Query: 186 DHIMAERKRREKLSQRFIALSAILP--GLKKMDKASVLGDAIRYVKELQERVKVLEEQ-- 241
+HI ER RR ++++ +L A+LP +++ D+AS++G AI YVK L++ ++ LE Q
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKR 238
Query: 242 TKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKDVLIRIHC 301
T++++ VV + L ++D ++ +D + +P+IEA V V +++ C
Sbjct: 239 TQQQSNSEVVENALNHLSGISSNDLWTTLEDQT-------CIPKIEATVIQNHVSLKVQC 291
Query: 302 EKQKGLLPKLISQLE-----MLHLSIT 323
EK++G L K I LE +LHL+IT
Sbjct: 292 EKKQGQLLKGIISLEKLKLTVLHLNIT 318
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTK 243
A +I++ER RR+KL+QR AL +++P + KMDKAS++ DAI Y++ LQ K LE + +
Sbjct: 53 ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIR 112
Query: 244 --KRTVESVVYVKKS---QLVVSGTDDESSSCDDNSEISTSDATLPEIEAR-VSDKDVLI 297
+ T +S + K L+V T + D S STS + E++ + ++ +++
Sbjct: 113 ELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGS--STSLIEVLELKVTFMGERTMVV 170
Query: 298 RIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITII 340
+ C K+ + KL E L+L I +++ F I
Sbjct: 171 SVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFI 213
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%), Gaps = 22/155 (14%)
Query: 186 DHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE---EQT 242
+H + E+KRREKL++RF+ L I+P + K+DK S+L D I Y++EL+ RV+ LE E T
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST 500
Query: 243 KKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEI-EARVSD--------- 292
T + +K+ + +G + S++C +N + ++ + EA +D
Sbjct: 501 DTET-RGTMTMKRKKPCDAG-ERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDN 558
Query: 293 -------KDVLIRIHCEKQKGLLPKLISQLEMLHL 320
+V+I + C ++G+L +++ + LHL
Sbjct: 559 LRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHL 593
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 12/114 (10%)
Query: 143 STGNTTSPPPFPPLGSQNYETVINPNHGT----KRSYPVTRTPALAQD--------HIMA 190
+T +T +P ++ N G+ +R TR A ++ H+ A
Sbjct: 194 TTKHTNQTGSYPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPAVLSHVEA 253
Query: 191 ERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
E++RREKL+ RF AL AI+P + +MDKAS+L DA+ Y++ L+ ++ LE + KK
Sbjct: 254 EKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 181 PALAQD----HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVK 236
PA +D H+ AER RREKL+ RF AL A++P + KMDK S+L DA+ Y+ EL+ + +
Sbjct: 334 PAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
Query: 237 VLEEQTKKRTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKDVL 296
+E +K +E + + + + + S C E S+ E++ SD D +
Sbjct: 394 NVE--LEKHAIE--IQFNELKEIAGQRNAIPSVC--KYEEKASEMMKIEVKIMESD-DAM 446
Query: 297 IRIHCEKQKGLLPKLISQLEMLHLSITNTSV 327
+R+ K +L++ L L L + + S+
Sbjct: 447 VRVESRKDHHPGARLMNALMDLELEVNHASI 477
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++++ER RR+KL+QR AL +++P + K+DKASV+ D+I Y++EL ++ K LE + ++
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 247 VESVV-----------YVKKSQLVVSGTDDESSSCDDNSEISTSDATLP--EIEARVS-- 291
S + + + S +D S + ST P +E +V+
Sbjct: 115 SRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWM 174
Query: 292 -DKDVLIRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPF 330
+K V++ I C K++ + +L LE L+L+I T+ F
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF 214
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 110/242 (45%), Gaps = 25/242 (10%)
Query: 121 KQLYGNLNMYSCSLKPKVEAPPSTGNTTSPPPFPPLGSQNYETVINPNHGTKRSYPVTRT 180
+ L+GN SC + E P + ++ + V+ + +K + + T
Sbjct: 210 QNLFGNYPNASCVEILREEQTPCL-----------IMNKEKDVVVQNANDSKANKKLLPT 258
Query: 181 PALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEE 240
++ +ERKRRE+++Q L A++P + K++K + DA+ Y+ EL + LE+
Sbjct: 259 ENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLED 318
Query: 241 QTKK-RTVESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKDVLIRI 299
+ K +E + Q ++ + E S N + ++ + E ++D LIR+
Sbjct: 319 ELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHET--GERDFLIRV 376
Query: 300 HCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAE------FCTTMKD 353
E ++ +LI +++ L I + + + LD+T++ + N + C ++D
Sbjct: 377 VQEHKQDGFKRLIEAVDLCELEIIDVNF-----TRLDLTVMTVLNVKANKDGIACGILRD 431
Query: 354 LV 355
L+
Sbjct: 432 LL 433
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 89/174 (51%), Gaps = 38/174 (21%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ +L ++ P +K+ D+AS++G I ++KELQ+ V+VLE + ++
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 245 RTVE---------------------SVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATL 283
+T+ V + + ++ + T E +C ++
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH-------- 114
Query: 284 PEIEARVSDKDVLIRIHCEKQKGLLPKLISQLE-----MLHLSITNT--SVLPF 330
+EA++S +V++R+ + G L K+IS LE +LHL+I++ +VL F
Sbjct: 115 ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYF 168
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 16/152 (10%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR++L+ R L +I+P + KMD+ S+LGDAI Y+KEL +++ L+++
Sbjct: 179 NLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDE----- 233
Query: 247 VESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATL---PEIEARVSDKDVLIRIHCEK 303
+ +L S S D +++ ++ + P+ E D+D + I C
Sbjct: 234 --------EQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSP 285
Query: 304 QKGLLPKLISQLEMLHLSITNTSVLPFGNSTL 335
+ GLL ++ LE L L I + F + +L
Sbjct: 286 KPGLLLSTVNTLETLGLEIEQCVISCFSDFSL 317
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 188 IMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTV 247
+++ER+RR ++ + AL +++P + KMDKAS++GDA+ YV+ELQ + K L+
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK-------- 184
Query: 248 ESVVYVKKSQLVVSGTDDESSSCDDNSEIS-----TSDATLPEIEARVSDKDVLIRIHCE 302
+ ++ S G + + S + +V +K +R+ C
Sbjct: 185 SDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCN 244
Query: 303 KQKGLLPKLISQLEML 318
K +G+ P L LE L
Sbjct: 245 KGEGVAPSLYKSLESL 260
>sp|O81037|BH070_ARATH Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2
SV=1
Length = 371
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 34/161 (21%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR +++ +L +I+P +++ D+AS++G AI +VK L+++++ LE Q +
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 245 RTVE----------SVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKD 294
+ + S+ + ++L S +++SS +IEA V +
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKL--------------KIEATVIESH 300
Query: 295 VLIRIHCEKQKGLLPKLISQLE-----MLHLSI---TNTSV 327
V ++I C +++G L + I LE +LHL+I TNTSV
Sbjct: 301 VNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSV 341
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 25/169 (14%)
Query: 167 PNHGTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIR 226
P TKR +P ++ L QD RK EK F L ++P + ++DK S+L + I+
Sbjct: 323 PLMHTKRMFP-SQNSGLNQDDPSDRRKENEK----FSVLRTMVPTVNEVDKESILNNTIK 377
Query: 227 YVKELQERVKVLEE--------QTKKRTVESV---VYVKKSQLVVSGTDDESSSCDDNSE 275
Y++EL+ RV+ LE + +++T E++ V ++++ SG D+S+ DDNS
Sbjct: 378 YLQELEARVEELESCMGSVNFVERQRKTTENLNDSVLIEET----SGNYDDSTKIDDNSG 433
Query: 276 ISTSDATL----PEIEARVSDKDVLIRIHCEKQKGLLPKLISQLEMLHL 320
T T+ + ++ + +V+I + C + ++ ++ L LH+
Sbjct: 434 -ETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRDYIVADIMETLSNLHM 481
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVK 236
A+ H AER+RR +++ +F L ILP L K DKASVLG+ +RY EL++ V+
Sbjct: 93 AKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 145
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
++MAER+RR++L+ R L +I+P + KMD+ S+LGDAI Y+KEL +++ L+E ++
Sbjct: 152 NLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQEL- 210
Query: 247 VESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIEARVSDKDVLIRIHCEKQKG 306
G++ S+ N + + E++ R + + I I C + G
Sbjct: 211 ---------------GSNSHLSTLITNESMVRNSLKF-EVDQR--EVNTHIDICCPTKPG 252
Query: 307 LLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTT 350
L+ +S LE L L I + F + +L + + + T
Sbjct: 253 LVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
>sp|Q9SK91|BH094_ARATH Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2
SV=2
Length = 304
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 187 HIMAERKRREKLSQRFIALSAILPG--LKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++P ++ D+AS++G AI YVKEL+ ++ +E + +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 245 RTVESVVYVKKSQLVVSGTDDES---SSCDDNSEISTSDATLPEIEARVSDKDVLIRIHC 301
S LV TD S S +S++ S ++ EIE V++ I+I
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVAESHANIKIMT 236
Query: 302 EKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDL 354
+K+ L KLI+ L+ L L++ + +V NS L + ++ T+ D+
Sbjct: 237 KKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDI 289
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 20/175 (11%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRT 246
H +AER RRE++++R +L ++P K DKAS+L + I YVK LQ +VKVL
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL-------- 192
Query: 247 VESVVYVKKSQLVVSGTDDESSSCDDNSEISTSDATLPEIE-ARVSDKDVLIRIHCEKQK 305
S+ + + S +++ +N+ S+ +A + E + A++ ++D+ + + K
Sbjct: 193 --SMSRLGGAASASSQISEDAGGSHENTS-SSGEAKMTEHQVAKLMEEDMGSAMQYLQGK 249
Query: 306 GLLPKLISQLEMLHLSITNTSVLPFGNST-------LDITIIALKNAEFCTTMKD 353
GL IS L + T S PF T L TI+A N T+KD
Sbjct: 250 GLCLMPIS-LATTISTATCPSRSPFVKDTGVPLSPNLSTTIVANGNGSSLVTVKD 303
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 170 GTKRSYPVTRTPALAQD------HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGD 223
GT + P +RT A+ H +AER RRE++++R AL ++P K DKAS+L +
Sbjct: 126 GTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 185
Query: 224 AIRYVKELQERVKVL 238
I YVK LQ +VKVL
Sbjct: 186 IIDYVKFLQLQVKVL 200
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 89/180 (49%), Gaps = 8/180 (4%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGL--KKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR+++++ L +++P ++ D+AS++G AI Y+KEL+ ++ +E K
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 245 RTVESVV---YVKKSQLVVSGTDDESSSCDDNSEISTSDAT---LPEIEARVSDKDVLIR 298
T ++ K + SG + + S TS A + EIE + + ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHASLK 246
Query: 299 IHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKDI 358
I +K+ L KL+S ++ L L++ + +V +S L + ++ T++D+ +
Sbjct: 247 ILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAV 306
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 7/69 (10%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
G+KRS A+ H ++ER+RR++++++ AL ++P K+DKAS+L +AI Y+K
Sbjct: 338 GSKRSRS-------AEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 230 ELQERVKVL 238
LQ +V+++
Sbjct: 391 SLQLQVQIM 399
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
AQ H ++E+KRR K++++ AL ++P K DKAS+L +AI Y+K+LQ +V+ L
Sbjct: 95 AQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 170 GTKRSYPVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVK 229
G K S R+ A A H +ERKRR+K++QR L ++P K DKAS+L + I Y+K
Sbjct: 202 GGKSSVSTKRSRAAAI-HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLK 260
Query: 230 ELQERVKVL 238
+LQ +V ++
Sbjct: 261 QLQAQVSMM 269
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 41/55 (74%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
A+ H ++ERKRR+++++R AL ++P K DKAS+L +AI Y+K LQ +++++
Sbjct: 286 AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H +AER RRE++++R +L ++P K DKAS+L + I YV+ LQ +VKVL
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
Length = 198
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 192 RKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTK 243
R+RRE++S++ L I+PG KMD AS+L +AIRY K L+ +V++L+ ++
Sbjct: 128 RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQ 179
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 176 PVTRTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERV 235
PVT+ + H + ERKRR++ +++ AL +LP K DKAS+L +AI+Y++ LQ +V
Sbjct: 223 PVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQV 282
Query: 236 KVL 238
+++
Sbjct: 283 QMM 285
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 190 AERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLEEQTKKRTVES 249
AER+RREKL R +AL + +P + M KAS++ DAI Y+ ELQ VK L E T E+
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLE-TFHEMEEA 94
Query: 250 VVYVKKSQLVVSGTD----DESSSCDDNSEISTSDATLPEIEARVSDKDVLIRIHCEKQK 305
+ + Q TD E + D N E+ ++ ++ ++I EK+
Sbjct: 95 PPEIDEEQ-----TDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKRD 149
Query: 306 GLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIALKNAEFCTTMKDLVKDIRLAFLK 364
G+ K + + L I + S L N + I+ +++ E C + KD L ++
Sbjct: 150 GIFTKFMEVMRFLGFEIIDIS-LTTSNGAILIS-ASVQTQELCDV--EQTKDFLLEVMR 204
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 187 HIMAERKRREKLSQRFIALSAILP--GLKKMDKASVLGDAIRYVKELQERVKVLEEQTKK 244
HI ER RR ++++ +L +++P L++ D+AS++G AI ++KEL++ ++ LE + +K
Sbjct: 117 HIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRK 176
Query: 245 ----RTVESVVYVKKSQLVVSGTDDESSSCDDN----SEISTSDATLPEIEARVSDKDVL 296
T ++ S L + + S S + D T E+EA V V
Sbjct: 177 DGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTT--EVEATVIQNHVS 234
Query: 297 IRIHCEKQKGLLPKLISQLEMLHLSITNTSVLPFGNSTLDITIIA--LKNAEFC 348
+++ C++ K + K I +E L L+I + ++ +S+ D I + LK + C
Sbjct: 235 LKVRCKRGKRQILKAIVSIEELKLAILHLTI----SSSFDFVIYSFNLKMEDGC 284
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 42/55 (76%)
Query: 184 AQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
A+ H ++E++RR +++++ AL +++P K DKAS+L +AI Y+K+LQ +V++L
Sbjct: 199 AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 169 HGTKRSYPVT--RTPALAQDHIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIR 226
HGT+ + T + A+ H +AER+RREK++++ L ++P K K S L DAI
Sbjct: 240 HGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIE 299
Query: 227 YVKELQERVKVL 238
YVK LQ +++ +
Sbjct: 300 YVKSLQSQIQGM 311
>sp|Q9LV17|BH079_ARATH Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2
SV=1
Length = 281
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKK-MDKASVLGDAIRYVKELQERVKVL 238
H +AER RREK+S++ AL I+PG K + KA VL + I Y++ LQ +V+ L
Sbjct: 164 HSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 189 MAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVLE 239
+A R+RRE++S++ L ++PG KMD AS+L +A Y+K L+ +VK LE
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 187 HIMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAIRYVKELQERVKVL 238
H ++ER+RR+K+++ AL +LP K D++S+L D I YVK LQ ++++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMF 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,074,434
Number of Sequences: 539616
Number of extensions: 5554022
Number of successful extensions: 23754
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 22764
Number of HSP's gapped (non-prelim): 1240
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)