BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037442
(180 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
GN=AGL62 PE=1 SV=1
Length = 299
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 3/154 (1%)
Query: 2 GRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHPS 61
GR+KIEM +K+ ++ QVTFSKRR+GLFKKA+EL TLC A +AIVVFSPG K FSFGHP+
Sbjct: 7 GRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPN 66
Query: 62 VDVVVQRLLNWEMDPKDETNSHV--DAEQEAKVEQLNEQLIDLVNQLEIEKKRGEMLDKA 119
VD V+ R +N P + N+ + + + V+ LN L +++QLE EKK+ + L K
Sbjct: 67 VDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYDELKKI 126
Query: 120 L-KAKGLSKYCKKSINDLGLDELLHMKASLEKLR 152
K K L + + + +L L +L K +LE L+
Sbjct: 127 REKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 105/167 (62%), Gaps = 15/167 (8%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR+KI M +K + RQVTFSKRR GLFKKA+EL TLC A I I+VFSP KPFSFGHP
Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHP 121
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQE-----AKVEQLNEQLIDLVNQLEIEKKRGEM 115
SV+ V+ R ++ N + Q+ A +LN QL +++++E EKK+G+
Sbjct: 122 SVESVLDRYVS-------RNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQA 174
Query: 116 LDKALKA---KGLSKYCKKSINDLGLDELLHMKASLEKLRENLKSHI 159
+++ K + + + +K + ++ + +L MK +LE+LR+ + +++
Sbjct: 175 MEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNM 221
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KI +K + +S SRQVTFSKRRNGL KKA ELA LC A + +++FS G+ + F
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ 94
S+ V++R D K ET+S D E + Q
Sbjct: 61 SMKSVIERY----SDAKGETSSENDPASEIQFWQ 90
>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
GN=AGL19 PE=1 SV=1
Length = 219
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 9/121 (7%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R K EMK ++++ SRQVTFSKRRNGL KKA EL+ LC A +A+V+FSP K + F
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHV--DAEQEAKVEQLNEQLIDLVNQLEIEKKR--GEML 116
S+ ++R ++ K+ N+H D Q+A+ E L + QLEI K++ GE +
Sbjct: 61 SIAATIER---YQRRIKEIGNNHKRNDNSQQARDE--TSGLTKKIEQLEISKRKLLGEGI 115
Query: 117 D 117
D
Sbjct: 116 D 116
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++NSRQVTFSKRR GL KKA+EL+ LC A +A++VFS GK F F
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60
Query: 61 SVDVVVQRLLNWEM 74
S+ + R N+++
Sbjct: 61 SMKKTLLRYGNYQI 74
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K + ++ SRQVTFSKRR+GLFKKA EL+ LC A + ++VFS + + F
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASS 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDA---EQEAKVEQLNEQLIDL 102
S+ +++R + DP N+ +A +QEA L +QL +L
Sbjct: 61 SMKSIIERYNETKEDPHQTMNASSEAKLWQQEAA--SLRQQLHNL 103
>sp|Q655V4|MAD30_ORYSJ MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica
GN=MADS30 PE=2 SV=1
Length = 221
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 4/129 (3%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MG+ KIEMK ++D+ RQVTFSKRR G KKANELA LC A + +VVFS GK F F P
Sbjct: 1 MGQGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSP 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQLNEQLIDLVNQLE--IEKKRGEMLDK 118
V ++++ +E+ ++ + + E V ++ +L + ++QLE + ++ GE L
Sbjct: 61 PV-ILMELFHRYEITTRNTRLQETNRDDEQMVMEIT-RLRNEIDQLEASLRRQTGEDLSS 118
Query: 119 ALKAKGLSK 127
LS+
Sbjct: 119 VSTVDELSQ 127
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 99/172 (57%), Gaps = 16/172 (9%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGH- 59
M R + E+K +++ SRQVTFSKRRNGL KKA EL+ LC A +A++VFSP G+ + F
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 60 PSVDVVVQRLLNWEMDPKDETNSHVDAEQ-EAKVEQLNEQLIDLVNQLE-IEKKRGEMLD 117
PS+ + R K T HV+ + + ++Q+ + + L +LE +++ R ++L
Sbjct: 61 PSLQKTIDRY-------KAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILG 113
Query: 118 KALKA------KGLSKYCKKSINDLGLDELLHMKASLEKLRENLKSHIDDME 163
+ L+ +GL +KS++++ L + ++ + KL+E ++ + D E
Sbjct: 114 ENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNE 165
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 32/197 (16%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ-----LNEQLIDLVNQLEIEKKRGEM 115
SV ++R ++ D +N+ AE A+ Q L Q+ +L NQ
Sbjct: 77 SVKATIER---YKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQ------NRNF 127
Query: 116 LDKALKA--------------KGLSKYCKKSINDLGLDELLHMKASLEKLREN---LKSH 158
L ++L A KG+SK K N+L E+ +M+ L N L++
Sbjct: 128 LGESLAALNLRDLRNLEQKIEKGISKIRAKK-NELLFAEIEYMQKREIDLHNNNQYLRAK 186
Query: 159 IDDMEASSSLLLLKGAT 175
I + E S + L+ G++
Sbjct: 187 IAETERSQQMNLMPGSS 203
>sp|Q8VWM8|M17_MAIZE MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1
Length = 259
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 23/151 (15%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K +++S +RQVTFSKRR GL KKANELA LC A + +V+FS GK F + P
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQLN--EQLIDLVNQLEIEKKRGEMLDK 118
+ ++ L+ + TNSH E++N +Q++ LE+ + + EM +
Sbjct: 61 ACS--LRELIEQY---QHATNSH--------FEEINHDQQIL-----LEMTRMKNEM--E 100
Query: 119 ALKAKGLSKYCKKSINDLGLDELLHMKASLE 149
L+ G+ +Y ++ L LD++ ++ LE
Sbjct: 101 KLET-GIRRYTGDDLSSLTLDDVSDLEQQLE 130
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 98/172 (56%), Gaps = 16/172 (9%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGH- 59
M R + E+K +++ SRQVTFSKRRNGL KKA EL+ LC A +A++VFSP G+ + F
Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASA 60
Query: 60 PSVDVVVQRLLNWEMDPKDETNSHVDAEQ-EAKVEQLNEQLIDLVNQLE-IEKKRGEMLD 117
PS+ + R K T HV+ + + ++Q+ + + L +LE +++ R ++L
Sbjct: 61 PSLQKTIDRY-------KAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILG 113
Query: 118 KALKA------KGLSKYCKKSINDLGLDELLHMKASLEKLRENLKSHIDDME 163
+ L+ +GL +KS++ + L + ++ + KL+E ++ + D E
Sbjct: 114 ENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNE 165
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 18/151 (11%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + +
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAK-VEQLNEQLIDLVNQLEIEKKRGEMLDKA 119
SV V+R ++ D +NS AE A+ +Q + +L ++ L+ R + D
Sbjct: 61 SVKSTVER---YKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGD-- 115
Query: 120 LKAKGLSKYCKKSINDLGLDELLHMKASLEK 150
SIN + L +L ++ LEK
Sbjct: 116 ------------SINTMSLRDLKQVENRLEK 134
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++NSRQVTFSKRR+GL KKA EL+ LC A +A++VFS GK F +
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQE-AKVEQLNEQLIDL 102
+ + R N +++S AE++ A+V+ L +QL L
Sbjct: 61 GMKQTLSRYGNH------QSSSASKAEEDCAEVDILKDQLSKL 97
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGH- 59
MGR KIE+K +++ SRQVTF KRRNGL KKA ELA LC A IA++VFS G+ + F +
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNV 60
Query: 60 PSVDVVVQRLLNWEMD-----PKDETNSHVDAEQEAKVEQLNEQLIDLVNQLEIEKKRGE 114
S ++R P + NSH +QEA + Q + N+ I + G
Sbjct: 61 NSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGN 120
Query: 115 MLDKALKA------KGLSKYCKKSINDLGLDELLHMK 145
M K LK+ KG+S+ K ++L E+ +M+
Sbjct: 121 MTAKELKSLENRLEKGISRIRSKK-HELLFSEIEYMQ 156
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 76
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ-----LNEQLIDLVNQ 105
SV ++R ++ D +N+ +E A+ Q L Q+ +L NQ
Sbjct: 77 SVKATIER---YKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQ 123
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K +++S +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + +
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ 94
++ ++R ++ D TN+ E A Q
Sbjct: 61 NIRSTIER---YKKACSDSTNTSTVQEINAAYYQ 91
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 8/110 (7%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A+VVFS G+ + + +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANN 76
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ-----LNEQLIDLVNQ 105
SV ++R ++ D +N+ +E A+ Q L Q+ +L+NQ
Sbjct: 77 SVKATIER---YKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQ 123
>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
GN=MADS50 PE=2 SV=1
Length = 230
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R K +MK +++ SRQVTFSKRRNGL KKA EL+ LC A +A++VFSP GK + F
Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60
Query: 61 SVDVVVQRLLNW 72
S ++R +
Sbjct: 61 STQKTIERYRTY 72
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K +++S++RQVT+SKRRNG+ KKA E++ LC AH+++++F+ GK F P
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 61 SVDVV 65
S +V
Sbjct: 61 STTLV 65
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Query: 2 GRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHPS 61
GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + + S
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
Query: 62 VDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ-----LNEQLIDLVN 104
V ++R ++ D +N+ AE A+ Q L +Q+I + N
Sbjct: 78 VKGTIER---YKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQN 122
>sp|Q9M2K8|AGL18_ARATH Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana
GN=AGL18 PE=2 SV=1
Length = 256
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR +IE+K +++ NSRQVTFSKRRNGL KKA EL+ LC A +A+++FS GK + F
Sbjct: 1 MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60
Query: 61 SVDVVVQR 68
++ ++ R
Sbjct: 61 CMEQILSR 68
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 50/69 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR ++EMK +++ +RQVTFSKRRNGL KKA EL+ LC A +A+++FS GK + FG
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 61 SVDVVVQRL 69
++ ++R
Sbjct: 61 GIESTIERY 69
>sp|Q6H711|MAD29_ORYSJ MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica
GN=MADS29 PE=2 SV=1
Length = 260
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++ +RQVTFSKRR GL KKANELA LC A + +V+FS GK F + P
Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP 60
Query: 61 SVDV 64
+ +
Sbjct: 61 TCSL 64
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KI ++ + +S SRQVTFSKRRNGL KKA EL+ LC A + +VVFS G+ + F
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSST 60
Query: 61 SVDVVVQRLLN 71
++ V+ R N
Sbjct: 61 NMKTVIDRYTN 71
>sp|O82794|AGL24_ARATH MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1
Length = 220
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 12/123 (9%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R KI +K + + +RQVTFSKRR G+FKKA+EL+ LC A +A+++FS GK F F
Sbjct: 1 MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60
Query: 61 SVDVVVQRL------LNWEMDPKDETNSHVDAEQEAKVEQLNEQLIDLVNQLEIEKKRGE 114
+ ++ R +N MDP ++H+ E + +L++++ D QL K RGE
Sbjct: 61 RMRDILGRYSLHASNINKLMDP---PSTHLRLEN-CNLSRLSKEVEDKTKQL--RKLRGE 114
Query: 115 MLD 117
LD
Sbjct: 115 DLD 117
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 8/108 (7%)
Query: 2 GRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHPS 61
GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + + S
Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 77
Query: 62 VDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ-----LNEQLIDLVN 104
V ++R ++ D +N+ AE A+ Q L +Q+I + N
Sbjct: 78 VKGTIER---YKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQN 122
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R KI++K + +S +RQVTFSKRR GLFKKA EL+ LC A +A+++FS GK F +
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60
Query: 61 SVDVVVQR 68
S+ +++R
Sbjct: 61 SMKQILER 68
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 8/115 (6%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R K +MK ++++ SRQVTFSKRRNGL KKA EL+ LC A +++++FSP GK + F
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAE---QEAKVEQLNEQLIDLVNQLEIEKKR 112
++ + R L KD ++ +E Q K E N ++ + QLE K++
Sbjct: 61 NMQDTIDRYLR---HTKDRVSTKPVSEENMQHLKYEAAN--MMKKIEQLEASKRK 110
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 55/82 (67%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR ++E+K +++ +RQVTFSKRRNGL KKA EL+ LC A +A+++FS GK + FG
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SVDVVVQRLLNWEMDPKDETNS 82
+ ++R + + +D N+
Sbjct: 61 GITKTLERYQHCCYNAQDSNNA 82
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KI ++ + DS SRQVTFSKRR GL KKA ELA LC A + +++FS GK + F
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60
Query: 61 SVDVVVQR 68
S+ V+ R
Sbjct: 61 SMKSVIDR 68
>sp|Q07472|MADS1_PETHY Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2
SV=1
Length = 231
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R KI++K +++ +RQVT+SKRRNGLFKKANEL LC A ++I++ S GK F P
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISP 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEA--KVEQLNEQLIDLVNQLEIEKKRGEMLD 117
S+ L + D NSH + QE K++++N L + EI ++ GE L+
Sbjct: 61 SITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNL-----RKEIRQRMGESLN 114
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R KI+++ + ++ +RQVTFSKRR GLFKKA EL+ LC A +A+++FS GK F F
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60
Query: 61 SVDVVVQR 68
S+ V++R
Sbjct: 61 SMKEVLER 68
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 10/124 (8%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSF-GH 59
M R K EMK ++++ SRQVTFSKRRNGL KKA EL+ LC A +A+++FSP GK + F
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 60 PSVDVVVQRLLNWEMDPKDETNSHV--DAEQEAKVEQLNEQLIDLVNQLEIEKKR--GEM 115
S+ V+R ++ +D ++H D Q++K E L + LEI ++ GE
Sbjct: 61 SSIPKTVER---YQKRIQDLGSNHKRNDNSQQSKDETYG--LARKIEHLEISTRKMMGEG 115
Query: 116 LDKA 119
LD +
Sbjct: 116 LDAS 119
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A++VFS G+ + + +
Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQ 94
SV ++R ++ D N+ +E A+ Q
Sbjct: 77 SVKGTIER---YKKACTDSPNTSSVSEANAQFYQ 107
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A+V+FS G+ + + +
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SVDVVVQRL---LNWEMDPKDETNSHVDAEQEAKVEQLNEQLIDLVN 104
SV ++R + ++P T ++ Q+ + +L Q+ D+ N
Sbjct: 76 SVRGTIERYKKACSDAVNPPSVTEANTQYYQQ-EASKLRRQIRDIQN 121
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KI ++ + +S SRQVTFSKRRNG+FKKA ELA LC A + +++FS G+ + +
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60
Query: 61 SVDVVVQR 68
S+ V+ R
Sbjct: 61 SMKSVIDR 68
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KI ++ + DS SRQVTFSKRR GL KKA ELA LC A + +++FS K + F
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASS 60
Query: 61 SVDVVVQRLLNWEMDPKDETN 81
SV ++R +M+ ++ N
Sbjct: 61 SVKSTIERFNTAKMEEQELMN 81
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
+GR KIE+K ++++ +RQVTF KRRNGL KKA EL+ LC A +A+V+FS G+ + + +
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75
Query: 61 SVDVVVQRL---LNWEMDPKDETNSHVDAEQEAKVEQLNEQLIDLVN 104
SV ++R + ++P T ++ Q+ + +L Q+ D+ N
Sbjct: 76 SVRGTIERYKKACSDAVNPPTITEANTQYYQQ-EASKLRRQIRDIQN 121
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++N+R VTFSKRRNGL KKA E+ LC A +A+++F+ GK + P
Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60
Query: 61 SVDV 64
S+D+
Sbjct: 61 SMDL 64
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR KIE+K ++++ +RQVT+SKRR G+ KKA EL LC A +AI++FS GK F P
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSP 60
Query: 61 SVDV 64
S D+
Sbjct: 61 STDI 64
>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
GN=MADS22 PE=2 SV=1
Length = 228
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 25/129 (19%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
M R + E+K ++ + +RQVTFSKRR GLFKKA EL+ LC A +A++VFS GK F
Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60
Query: 61 SVDVVVQRLLNWEMDPKDETNSHVD----AEQ--------EAKVEQLNEQLIDLVNQLEI 108
S++ ++ D+ N+H + AEQ +K LNEQL + L +
Sbjct: 61 SMNEII-----------DKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEA--SLRL 107
Query: 109 EKKRGEMLD 117
+ RGE L+
Sbjct: 108 RQMRGEELE 116
>sp|Q38837|AGL13_ARATH Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana
GN=AGL13 PE=2 SV=2
Length = 244
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR K+E+K +++ +RQVTFSKR++GL KKA EL+ LC A +++++FS GGK + F +
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNV 60
Query: 61 SVDVVVQR 68
V ++R
Sbjct: 61 GVGRTIER 68
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 18/121 (14%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSF-GH 59
MGR ++++ +++ +RQVTFSKRRNGL KKA+E++ LC A +A++VFS GK + F H
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 PSVDVVVQRLLNWEMDPK--------DETN---------SHVDAEQEAKVEQLNEQLIDL 102
S++ +++R + D + D+ N S +DA Q+++ + L EQL L
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 120
Query: 103 V 103
Sbjct: 121 T 121
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 18/121 (14%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSF-GH 59
MGR ++++ +++ +RQVTFSKRRNGL KKA+E++ LC A +A++VFS GK + F H
Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSH 60
Query: 60 PSVDVVVQRLLNWEMDPK--------DETN---------SHVDAEQEAKVEQLNEQLIDL 102
S++ +++R + D + D+ N S +DA Q+++ + L EQL L
Sbjct: 61 SSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTL 120
Query: 103 V 103
Sbjct: 121 T 121
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR K+++K +++ +RQVTFSKRRNGL KKA+E++ LC A +A +VFSP GK + +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD 60
Query: 61 S-VDVVVQR 68
S +D +++R
Sbjct: 61 SRMDKILER 69
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR K+E+K +++ SRQVTF+KRRNGL KKA EL+ LC A +A+++FS G+ F F
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 SV 62
S
Sbjct: 61 SC 62
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR K+E+K +++ SRQVTF+KRRNGL KKA EL+ LC A +A+++FS G+ F F
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTS 60
Query: 61 SV 62
S
Sbjct: 61 SC 62
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR ++E+K +++ +RQVTFSKRRNGL KKA EL+ LC A +A+++FS GK + FG
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 60
Query: 61 SVDVVVQR 68
++ +++
Sbjct: 61 GINKTLEK 68
>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
GN=MADS47 PE=1 SV=2
Length = 246
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 3 RRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHPSV 62
R +I ++ + + +RQVTFSKRR GLFKKA EL+ LC A + +VVFS GK F F S+
Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81
Query: 63 DVVVQRLLNWEMDPKDETNSHVDAEQEAKVEQLNEQ 98
+ ++ D NSH Q A+ QL+ Q
Sbjct: 82 EQII-----------DRYNSHSKTLQRAEPSQLDLQ 106
>sp|Q84NC2|MAD31_ORYSJ MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica
GN=MADS31 PE=2 SV=1
Length = 178
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 1 MGRRKIEMKMVKDSNSRQVTFSKRRNGLFKKANELATLCAAHIAIVVFSPGGKPFSFGHP 60
MGR ++E+K +++ +RQVTFSKRR GL KKANELA LC A I ++VFS GK + + P
Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSP 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,840,596
Number of Sequences: 539616
Number of extensions: 2594994
Number of successful extensions: 9728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 9325
Number of HSP's gapped (non-prelim): 594
length of query: 180
length of database: 191,569,459
effective HSP length: 110
effective length of query: 70
effective length of database: 132,211,699
effective search space: 9254818930
effective search space used: 9254818930
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)