Citrus Sinensis ID: 037444

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Secondary Structure (PSIPRED)
cccccccEEEEEEEEcccccccccccccEEEEEEEccccccccccEEEEEcEEEEcccccccccccccccccccccccccEEEEEEcccccccccEEEEccccEEEEEEccccccccccccccccHHHcccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEcccccccHHHHHHHHcccccEEEccccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHccEEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEHHHccccHHHHHHHccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEcccccccccccccEEEEEEEEEccccccccEEEEEEEEEEccccccccccccccccccccccccEEEEEcccccccccccEEEEcccccEEEEEcccccEEccccccccHHHHHHHcccccHHHHHHHHHccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccHHHcccccccHHHHHHHHcccccEEEEEcccHHHHHHHHHHHcccccEEEHHHHEccccccccccHHHHHHHHHHHEEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHccHHHHHHHHccccccEEEEEEc
Coil and Loop (DISEMBL)
MAAEQEAVSNKRVILsnyvtgfpkesdmkitsGSIKlkvaegskdTVLLKNLYLSCDPYMrwrmskldrpsfvdsfhpgeLKFWILHIQNYAkddlvwgstgweeyslvtapQLLIkiqhtdvplsyytgilgmpgvtayaglyevcspkkgeYVYVSAASGAVGQLVGQFAKLAGCyvvgsagskeKVDLLKnkfgfddafnykeepdldAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIsqynlekpegvhNLEQLIGKRIRlegflagdyyhlYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Flexible Loop (DISEMBL)
maaeqeavsnkrvilsnyvtgfpkesdmkiTSGSIKlkvaegskdtvlLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Low Complexity Region (SEG)
MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Disordered region (IsUnstruct)
************VILSNYVTGFP******ITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQL****
Disordered Region (DISOPRED)
******A***KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Disordered Region (DISEMBL)
*********NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Disordered Region (DISPRO)
********SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q39173	343	NADP-dependent alkenal do	no	no	0.976	0.965	0.686	1e-133
Q39172	345	NADP-dependent alkenal do	no	no	0.973	0.956	0.674	1e-130
Q6WAU0	342	(+)-pulegone reductase OS	N/A	no	0.976	0.967	0.632	1e-125
O34812	339	Putative NADP-dependent o	yes	no	0.955	0.955	0.405	3e-61
Q9C0Y6	349	Zinc-type alcohol dehydro	yes	no	0.970	0.942	0.415	3e-60
P76113	345	NADPH-dependent curcumin	N/A	no	0.932	0.915	0.389	2e-57
Q91YR9	329	Prostaglandin reductase 1	yes	no	0.932	0.960	0.418	1e-54
Q3SZJ4	329	Prostaglandin reductase 1	yes	no	0.941	0.969	0.404	7e-54
P97584	329	Prostaglandin reductase 1	yes	no	0.943	0.972	0.411	1e-53
Q9EQZ5	329	Prostaglandin reductase 1	yes	no	0.941	0.969	0.405	5e-53

>sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2

 Score =  473 bits (1218), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/341 (68%), Positives = 275/341 (80%), Gaps = 10/341 (2%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
            +NK+VI  ++V+GFPKESD   T+ +++L+V EGSK +VL+KNLYLSCDPYMR RM K 
Sbjct: 2   TTNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSK-SVLVKNLYLSCDPYMRSRMGKP 60

Query: 68  DRPS-FVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIKI 118
           D  S    ++ PG+    + +  +      +Y K DL+WG  GWEEYS++T    +  KI
Sbjct: 61  DPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKI 120

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
           QHTDVPLSYYTG+LGMPG+TAYAG YEVCSPKKGE VYVSAASGAVGQLVGQFAK+ GCY
Sbjct: 121 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP+GID+YFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           LNM   GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  YPKFLELV+P
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I+EGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V +A
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIA 341

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4

>sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1

 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/341 (67%), Positives = 270/341 (79%), Gaps = 11/341 (3%)

Query: 9   SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           +NK+VIL +YV+GFP ESD   T+ +++L+V EG+ ++VL+KNLYLSCDPYMR RM K D
Sbjct: 4   TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGKPD 62

Query: 69  --RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIKI 118
               +   ++ PG+    + +  I      +Y K DL+WG   WEEYS++T       KI
Sbjct: 63  PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
           QHTDVPLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQ AK+ GCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP GIDIYFENVGGKMLDAVL
Sbjct: 183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVL 242

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           +NM + GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  Y KFLE V+P
Sbjct: 243 VNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLP 302

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            IREGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V VA
Sbjct: 303 HIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343

Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/340 (63%), Positives = 276/340 (81%), Gaps = 9/340 (2%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           V NK+++L+NY+ G  K+SD+ + + +I +++ +G    +L+KNLYLS +PY+  RM KL
Sbjct: 2   VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKL 61

Query: 68  DRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGS-TGWEEYSLVTAPQLLIKIQ 119
           D P F DS  PG   + + +  +      +Y K +L+WGS  GWEEY+L+  P  L KIQ
Sbjct: 62  DIPQF-DSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120

Query: 120 HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV 179
             DVPLSYY GILGMPG+TAYAG +E+CSPKKGE V+V+AA+G+VGQLVGQFAK+ GCYV
Sbjct: 121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180

Query: 180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
           VGSAGSKEKVDLLKNKFGFDDAFNYKEE D D ALKR FP+GIDIYF+NVGGKML+AV+ 
Sbjct: 181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240

Query: 240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
           NMR+ GRIAVCGM+SQY+L++PEGVHNL +LI K+IR++GF+  DYYHLYPKFLE+V+P 
Sbjct: 241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           I+EGK+ YVEDI+EGLE+AP+AL+G++ GRNVG Q+VAV+
Sbjct: 301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVS 340

Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 1

>sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1

 Score =  235 bits (600), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 191/340 (56%), Gaps = 16/340 (4%)

Query: 9   SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           S +++ L+    G P   D +  +    + V E  +  VL+K LY+S DPYMR RM   D
Sbjct: 4   SQQQIQLARRPQGIPVHEDFRFET----IPVPEPKQGEVLVKTLYVSVDPYMRGRMQ--D 57

Query: 69  RPSFVDSF------HPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTD 122
             S+V+ F        G +   +    +  K D+V G+  W+E+S V+   L  KI  + 
Sbjct: 58  TKSYVEPFALDKALSGGVIAEVVSDGNHLKKGDIVIGNLSWQEFSAVSESALR-KIDTSL 116

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
            P S Y GILGM G+TAY GL ++  PK+GE V VS A+GAVG  VGQ AK+ G  VVG 
Sbjct: 117 APASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGI 176

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AGS EK+D LK +  FD+A NYK   D+  AL+   P G+D+YF+NVGG + DAV+  + 
Sbjct: 177 AGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLN 236

Query: 243 LRGRIAVCGMISQYNLEKPE---GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
              RI VCG IS YN E      G     +LI  +  ++GF+  DY   + +  + +   
Sbjct: 237 EFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEW 296

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++ GK+ Y E I EG EN P A +GLF G N GKQL+ V+
Sbjct: 297 LKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336

Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1

 Score =  232 bits (592), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/349 (41%), Positives = 199/349 (57%), Gaps = 20/349 (5%)

Query: 8   VSNKRVILSNYV---TGFPKESD-MKITSGSIKLKVAEGSKDT-VLLKNLYLSCDPYMRW 62
           VSN  VI+  Y+    G+P   + +        L+ A+  ++T VLLKN+Y S DPY+R 
Sbjct: 2   VSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDEETPVLLKNIYTSVDPYLRM 61

Query: 63  RMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDL--------VWGSTGWEEYSLVTAPQL 114
           RM      S++     G+  F+   +    K  L        V   +GWEEY+ V+   L
Sbjct: 62  RMQSPKHASYIPPLELGK-PFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFVSKQAL 120

Query: 115 --LIKIQHT-DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQF 171
             L  I +   +PL  + G LGMP  TAY GL  +  PK GE +Y+SAASGAVGQ+ GQ 
Sbjct: 121 GFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQMAGQL 180

Query: 172 AKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG 231
           AK  G +VVGS GS EK  +  +  G+D  FNYK+E    A L R  P+GIDIYFENVGG
Sbjct: 181 AKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPFKA-LPRLCPKGIDIYFENVGG 238

Query: 232 KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY-P 290
           + +DAVL NM L+GRI  CG ISQYN   P  V NL  ++ K + ++GF+  +    Y  
Sbjct: 239 ETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANILPQYQE 298

Query: 291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++ E +   I EGK+ Y  D+ +GLE+AP A +G+  G+N GK +V +A
Sbjct: 299 QYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIA 347

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3

 Score =  222 bits (566), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 192/359 (53%), Gaps = 43/359 (11%)

Query: 5   QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRM 64
           Q+   N+R +L++   G P   + ++        VA   +  VLL+ +YLS DPYMR RM
Sbjct: 3   QQKQRNRRWVLASRPHGAPVPENFRLEEDD----VATPGEGQVLLRTVYLSLDPYMRGRM 58

Query: 65  SKLDRPSF------------------VDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEY 106
           S  D PS+                  V+S HP           +Y   D V G +GW++Y
Sbjct: 59  S--DEPSYSPPVDIGGVMVGGTVSRVVESNHP-----------DYQSGDWVLGYSGWQDY 105

Query: 107 SLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQ 166
            + +   L+    H   P S+  G+LGMPG TAY GL ++  PK+GE + V+AA+G VG 
Sbjct: 106 DISSGDDLVKLGDHPQNP-SWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGA 164

Query: 167 LVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF 226
            VGQ  KL GC VVG AG  EK        GFD   ++  + D    L +  P+GIDIY+
Sbjct: 165 TVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKGIDIYY 223

Query: 227 ENVGGKMLDAVLLNMRLRGRIAVCGMISQYN-LEKPEGVHNLEQLIG----KRIRLEGF- 280
           ENVGGK+ DAVL  +    RI VCG++S YN  E P G   L  L+     KRIRL+GF 
Sbjct: 224 ENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFI 283

Query: 281 LAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           +A DY H   +F   +   ++E K+ Y E+I +GLENAP   +GL  G+N GK ++ VA
Sbjct: 284 IAQDYGHRIHEFQREMGQWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342

Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 3

>sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2

 Score =  213 bits (542), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/339 (41%), Positives = 192/339 (56%), Gaps = 23/339 (6%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEG---SKDTVLLKNLYLSCDPYMRWRM 64
           V  K   L  +  GFP       T G+ +LK  E    +   VLL+ L+LS DPYMR   
Sbjct: 2   VQAKSWTLKKHFEGFP-------TDGNFELKTTELPPLNNGEVLLEALFLSVDPYMRVAA 54

Query: 65  SKLDRPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQLL-IKIQHT 121
            KL     +     GE    ++  +N A  K  +V    GW  +S+     L  + ++  
Sbjct: 55  KKLKEGDRMM----GEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWP 110

Query: 122 D-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV 180
           D +PLS   G +GMPG+TAY GL ++C  K GE V VSAA+GAVG +VGQ AKL GC VV
Sbjct: 111 DKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVV 170

Query: 181 GSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLN 240
           G+AGS EKV  LK K GFD AFNYK    L+ AL+   P G D YF+NVGG+  +AV+L 
Sbjct: 171 GTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQ 229

Query: 241 MRLRGRIAVCGMISQYNLEK--PEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVI 297
           M+  GRIA+CG ISQYN     P+G    E +I +++R+EGF+   +   +  K L  ++
Sbjct: 230 MKTFGRIAICGAISQYNRTGPCPQGPAP-EVVIYQQLRMEGFIVNRWQGEVRQKALTELM 288

Query: 298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
             + EGK+   E + EG E  PAA +G+  G N+GK +V
Sbjct: 289 NWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1

 Score =  211 bits (537), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 186/336 (55%), Gaps = 17/336 (5%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSK 66
           V  K   L  +  G+P  SD ++ +  +  LK  E     VLL+ LYL+ DPYMR     
Sbjct: 2   VHAKSWTLKKHFVGYPTNSDFELKTVELPPLKDGE-----VLLEALYLTVDPYMRIMAKS 56

Query: 67  LDRPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTD 122
           L     +     GE    ++  +N A     +V   +GW  +S+    +L  ++      
Sbjct: 57  LKEGDMMM----GEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEWPDT 112

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           +PLS   G +GMPG+TAY GL ++C  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 113 LPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGT 172

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AGS EKV  LK K GFD A NYK    L+ ALK   P+G D YF+NVGG+  +  +  M+
Sbjct: 173 AGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMK 231

Query: 243 LRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAI 300
             GRIA+CG IS YN   P     + E +I K + L+GF+   +   +  K L  ++  +
Sbjct: 232 KFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALRDLLKWV 291

Query: 301 REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
            EGK+ Y E + EG EN PAA +GL  G N+GK +V
Sbjct: 292 SEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3

 Score =  210 bits (535), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 189/335 (56%), Gaps = 15/335 (4%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           V  K   L  +  GFP +S+ ++ +     ++   +   VLL+ L+LS DPYMR    KL
Sbjct: 2   VQAKTWTLKKHFEGFPTDSNFELRT----TELPPLNNGEVLLEALFLSVDPYMRVAAKKL 57

Query: 68  DRPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDV 123
                 DS   GE    ++  +N A     +V    GW  +S+     L  L       +
Sbjct: 58  KEG---DSMM-GEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKL 113

Query: 124 PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA 183
           PLS   G +GMPG+TAY GL ++C  K GE V V+AA+GAVG +VGQ AKL GC VVG+A
Sbjct: 114 PLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTA 173

Query: 184 GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRL 243
           GS EKV  LK K GFD AFNYK    L+ AL+   P G D YF+NVGG+  + V+L M+ 
Sbjct: 174 GSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKT 232

Query: 244 RGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIR 301
            GRIA+CG ISQYN   P     + E +I +++R+EGF+   +   +  K L  ++  + 
Sbjct: 233 FGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVS 292

Query: 302 EGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           EGK+ Y E I EG E  PAA +G+  G N+GK +V
Sbjct: 293 EGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIV 327

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

>sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1

 Score =  208 bits (529), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 192/338 (56%), Gaps = 19/338 (5%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSK 66
           V  K   L  +  G P +SD ++ +  +  LK  E     VLL+ L+LS DPYMR    +
Sbjct: 2   VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGE-----VLLEALFLSVDPYMRIASKR 56

Query: 67  LDRPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTD 122
           L   + +     G+    ++  +N A     +V   +GW  + +     L  L+      
Sbjct: 57  LKEGAVM----MGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDK 112

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           +PLS   G +GMPG+TAY GL EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 113 LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 172

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AGS EK+  LK + GFD AFNYK    L+ ALK+  P G D YF+NVGG+ L+ VL  M+
Sbjct: 173 AGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 231

Query: 243 LRGRIAVCGMISQYNL--EKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPA 299
             G+IA+CG IS YN   + P G  + E +I K++R+EGF+   +   +  K L  ++  
Sbjct: 232 DFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKW 290

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA 337
           + EGK+ Y E + +G EN PAA + +  G N+GK +V 
Sbjct: 291 VLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 328

Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
255577891	345	alcohol dehydrogenase, putative [Ricinus	0.985	0.968	0.771	1e-154
225434189	345	PREDICTED: NADP-dependent alkenal double	0.988	0.971	0.720	1e-140
224092856	345	predicted protein [Populus trichocarpa]	0.958	0.942	0.700	1e-139
308943732	347	alcohol dehydrogenase [Camellia sinensis	0.997	0.974	0.690	1e-138
225434197	345	PREDICTED: NADP-dependent alkenal double	0.988	0.971	0.709	1e-138
6692816	343	allyl alcohol dehydrogenase [Nicotiana t	0.979	0.967	0.727	1e-138
444302246	351	Chain A, X-ray Crystal Structure Of A Do	0.979	0.945	0.727	1e-137
255577881	368	alcohol dehydrogenase, putative [Ricinus	0.994	0.915	0.701	1e-136
224117858	348	predicted protein [Populus trichocarpa]	0.982	0.956	0.700	1e-136
342898879	348	ketone/zingerone synthase 1 [Rubus idaeu	0.976	0.951	0.707	1e-136

>gi|255577891|ref|XP_002529818.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530695|gb|EEF32567.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/341 (77%), Positives = 299/341 (87%), Gaps = 7/341 (2%)

Query: 6   EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS 65
           E VSNK+V+L NYVTGFP+ESDM+I + SIKL+V EG+ D VL+KNLYLSCDPYMR RM+
Sbjct: 3   EEVSNKQVVLKNYVTGFPEESDMEIITSSIKLQVPEGTTDAVLVKNLYLSCDPYMRGRMT 62

Query: 66  KLDRPSFVDSFHPGE-------LKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKI 118
           K D PSFV SF PG+       +K       NY K DL WG TGWEEYS++ +P+LLIKI
Sbjct: 63  KRDSPSFVSSFEPGKPLGGYGVVKVLESTHPNYKKGDLAWGFTGWEEYSVIVSPKLLIKI 122

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
           +HTD+PLSYYTGILGM GVTAYAG +EVCSPKKGE+VYVSAASGAVGQLVGQFAK++GCY
Sbjct: 123 EHTDLPLSYYTGILGMHGVTAYAGFFEVCSPKKGEFVYVSAASGAVGQLVGQFAKVSGCY 182

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVD+LKNKFGFDDAFNYKEEPDLDAALKR FP+GIDIYFENVGG+MLDAVL
Sbjct: 183 VVGSAGSKEKVDMLKNKFGFDDAFNYKEEPDLDAALKRYFPEGIDIYFENVGGEMLDAVL 242

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           LNMR+RGRIAVCGMISQYNL+KPEGVHNL  +IGKRIR+EGFLAGD+YHLYP  L++VIP
Sbjct: 243 LNMRIRGRIAVCGMISQYNLDKPEGVHNLSAIIGKRIRMEGFLAGDFYHLYPNLLDMVIP 302

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I+EGK+VYVED+AEGLENAP AL+G+F GRNVGKQLV VA
Sbjct: 303 YIKEGKIVYVEDVAEGLENAPTALIGIFRGRNVGKQLVVVA 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera]

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/344 (72%), Positives = 288/344 (83%), Gaps = 9/344 (2%)

Query: 3   AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW 62
           A+ EAVSNK+VI  +YV+GFPKESDM +T+ +I LKV EGS + VL+KNLYLSCDPYMR 
Sbjct: 2   ADGEAVSNKQVIFRDYVSGFPKESDMYVTTSTISLKVPEGS-EAVLVKNLYLSCDPYMRS 60

Query: 63  RMSKLDRPSFVDSFHPGE-------LKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLL 115
           RM  + + S+V+ F PG         K       ++   DLVWG TGWEEYSL+T  + L
Sbjct: 61  RMRNI-QGSYVEPFKPGSPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDERL 119

Query: 116 IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA 175
            KIQHTDVPLSYYTGILGM G+TAY+G YE+CSPKKGEYV++SAASGAVGQLVGQFAKL 
Sbjct: 120 FKIQHTDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLL 179

Query: 176 GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLD 235
           GCYVVGSAG+KEKVDLLKNKFGFD+AFNYKEE DL+A LKR FP+GIDIYFENVGGKMLD
Sbjct: 180 GCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKMLD 239

Query: 236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLEL 295
           AVL+NMRL GRIAVCGMISQYNLE+PEGV NL  ++ KRIR+EGFL  DYYHLYPKFL+L
Sbjct: 240 AVLVNMRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLDL 299

Query: 296 VIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++P IREGK+VYVEDIAEGLE+AP AL+GL++GRNVGKQ+V VA
Sbjct: 300 IMPYIREGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092856|ref|XP_002309725.1| predicted protein [Populus trichocarpa] gi|222852628|gb|EEE90175.1| predicted protein [Populus trichocarpa]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/354 (70%), Positives = 289/354 (81%), Gaps = 29/354 (8%)

Query: 3   AEQEAVSNKRVILSNYVTGFPKESDMKI-TSGSIKLKVAEGSKDTVLLKNLYLSCDPYMR 61
           ++QE VSNK+V L NYVTGFPKESDM+I T+ +IKL+V EG+KD VL+KNLYLSCDPYMR
Sbjct: 2   SDQE-VSNKQVALKNYVTGFPKESDMQIITTNTIKLRVPEGTKDAVLVKNLYLSCDPYMR 60

Query: 62  WRMS---------KLDRP-------SFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEE 105
            RMS         +L +P         +DS HP           NY K DL WG TGWEE
Sbjct: 61  ERMSAGDGGFSSFELGKPLTGYGVAKILDSTHP-----------NYKKGDLAWGFTGWEE 109

Query: 106 YSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVG 165
           YSL+ +P++LIKI+H DVPLSYYTGILGMPG+TAYAG YE+C+PKKGEYVY+SAASGAVG
Sbjct: 110 YSLIVSPRILIKIEHADVPLSYYTGILGMPGMTAYAGFYEICTPKKGEYVYISAASGAVG 169

Query: 166 QLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIY 225
           Q+VGQFAKL+GCYVVGSAGSKEKVDLLKNKFGFD+AFNYKEEPDL AALKR FP+GIDIY
Sbjct: 170 QIVGQFAKLSGCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEPDLTAALKRYFPEGIDIY 229

Query: 226 FENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY 285
           FENVGGKMLDAVL NMR  GRIA CGMISQYNLEK EGVHNL  ++ K+IR++GFLA  Y
Sbjct: 230 FENVGGKMLDAVLANMRTLGRIAACGMISQYNLEKHEGVHNLTLIVWKQIRMQGFLAASY 289

Query: 286 YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           YHLYPKFLE+ +P I++GK+VYVED AEGLE+ P +L+ LFTG+NVGK+L+ VA
Sbjct: 290 YHLYPKFLEMALPYIKQGKIVYVEDKAEGLESGPTSLLSLFTGQNVGKKLLVVA 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis]

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/346 (69%), Positives = 287/346 (82%), Gaps = 8/346 (2%)

Query: 1   MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYM 60
           M   +E V NK++IL  YV+GFPK SDM + +G+I L++ EGSK+ +L+KNLYLSCDPYM
Sbjct: 1   MEVVEEEVGNKQIILKEYVSGFPKGSDMVVKTGTIHLQLPEGSKNAILVKNLYLSCDPYM 60

Query: 61  RWRMSKLDRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQ 113
             RM KL+  S+V+SF PG     F +  +      N+ K DL+WG TGWEEY+++T P 
Sbjct: 61  CRRMRKLED-SYVESFTPGSPITGFGVARVLDSGHPNFKKGDLIWGRTGWEEYTIITEPA 119

Query: 114 LLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAK 173
            + KIQ+TDVPLSYYTGILGM G+TAY G YE+CSPK+G+YV++SAASGAVGQLVGQFAK
Sbjct: 120 NVFKIQNTDVPLSYYTGILGMHGMTAYVGFYEICSPKQGDYVFISAASGAVGQLVGQFAK 179

Query: 174 LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM 233
           L GCYVVGSAG+KEKVDLLKNKFGFD+AFNYKEE DL+AALKR FP GI+IYFENVGGKM
Sbjct: 180 LLGCYVVGSAGTKEKVDLLKNKFGFDEAFNYKEEKDLEAALKRYFPNGINIYFENVGGKM 239

Query: 234 LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL 293
           LDAVL NMRL  RIAVCGMISQYNLE+PEGVHNL  LI KR+R+EGF+  DYYHLYPKFL
Sbjct: 240 LDAVLANMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKFL 299

Query: 294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           E+++P I+ GK+ YVED+AEGLE+APAAL+GLF+GRNVGKQ+V VA
Sbjct: 300 EMILPCIKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVVVA 345

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera]

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/344 (70%), Positives = 287/344 (83%), Gaps = 9/344 (2%)

Query: 3   AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW 62
           A+ E VSNK+VI  +YV+GFPKESDM +T+ +I LKV EGSK  V++KNLYLSCDPYMR 
Sbjct: 2   ADAEEVSNKQVIFRDYVSGFPKESDMYMTTSTISLKVPEGSK-AVVVKNLYLSCDPYMRP 60

Query: 63  RMSKLDRPSFVDSFHPGEL-------KFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLL 115
           RMS     S++ SF PG +       K       N++K DLVWG TGWEEY+L+TAP+ L
Sbjct: 61  RMS-YTTDSYIHSFKPGSVISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPESL 119

Query: 116 IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA 175
            KI + DVPLSYY GILGMPG+TAYAG YE+CSPKKGEYVYVSAASGAVGQLVGQFAKL 
Sbjct: 120 FKIPNNDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLI 179

Query: 176 GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLD 235
           GCYVVGSAGSKEKVDLLKNKFGFD+AFNYKEE DL A LKR FP+GIDIYFENVGG MLD
Sbjct: 180 GCYVVGSAGSKEKVDLLKNKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPMLD 239

Query: 236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLEL 295
           AVL NMR++GRIA CGMISQYNL+KP GV+NL  +I K+I+++GF+AG Y+HLYPKFLE+
Sbjct: 240 AVLANMRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLEM 299

Query: 296 VIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++P ++EGK+VYVEDIAEGLE+AP AL+GLF+GRNVGKQ+V VA
Sbjct: 300 ILPHVKEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVLVA 343

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/341 (72%), Positives = 285/341 (83%), Gaps = 9/341 (2%)

Query: 6   EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS 65
           E VSNK+VIL NYVTG+PKESDM+I + +IKLKV EGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61

Query: 66  KLDRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQLLIKI 118
           K++  S+V+SF PG     + +  +       + K DLVWG TGWEEYS++T  Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
              DVPLSYYTGILGMPG+TAYAG +EVCSPKKGE V+VSAASGAVGQLVGQFAK+ GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK+KFGFD+AFNYKEE DL AALKR FP GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           +NM+L GRIAVCGMISQYNLE+ EGVHNL  LI KRIR+EGFL  DYYHLYPK+LE+VIP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I+ GK+VYVED+A GLE+AP ALVGLF+GRN+GKQ+V V+
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/341 (72%), Positives = 285/341 (83%), Gaps = 9/341 (2%)

Query: 6   EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS 65
           E VSNK+VIL NYVTG+PKESDM+I + +IKLKV EGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61

Query: 66  KLDRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQLLIKI 118
           K++  S+V+SF PG     + +  +       + K DLVWG TGWEEYS++T  Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
              DVPLSYYTGILGMPG+TAYAG +EVCSPKKGE V+VSAASGAVGQLVGQFAK+ GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK+KFGFD+AFNYKEE DL AALKR FP GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           +NM+L GRIAVCGMISQYNLE+ EGVHNL  LI KRIR+EGFL  DYYHLYPK+LE+VIP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I+ GK+VYVED+A GLE+AP ALVGLF+GRN+GKQ+V V+
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577881|ref|XP_002529813.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223530690|gb|EEF32562.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/348 (70%), Positives = 284/348 (81%), Gaps = 11/348 (3%)

Query: 1   MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYM 60
           MA+E E VSNK+VI   YV+GFPKESDM +T+ S+KL+V EGS  +VL+KNLYLSCDPYM
Sbjct: 21  MASEAEVVSNKQVIFKEYVSGFPKESDMYMTTSSVKLQVEEGST-SVLVKNLYLSCDPYM 79

Query: 61  RWRMSKL--DRPSFVDSFHPGELKFWILHIQ-------NYAKDDLVWGSTGWEEYSLVTA 111
           R RM     D P F    HPG   F +   +        + K DLVWGST WEEY+L+TA
Sbjct: 80  RGRMRNTPSDDPEF-SPLHPGSPVFGLGVAKVVDSGHPGFKKGDLVWGSTRWEEYTLITA 138

Query: 112 PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQF 171
           P+ L KI HTD+PLSYYTG+LGMPG+TAY GL ++C+PKKGE VYVSAASGAVGQLVGQF
Sbjct: 139 PEGLFKIHHTDIPLSYYTGLLGMPGITAYFGLNDICTPKKGERVYVSAASGAVGQLVGQF 198

Query: 172 AKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG 231
           AKL GCYVVGSAGSKEKVDLLKNKFGFD+AFNY+EE D +AALKR FP+GIDIYFENVGG
Sbjct: 199 AKLMGCYVVGSAGSKEKVDLLKNKFGFDEAFNYREEHDWNAALKRYFPEGIDIYFENVGG 258

Query: 232 KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK 291
           KMLDAVLLNMR  GRIA CGMISQYNLE P+GVHNL  ++ KRIR++GF++ DY+  Y K
Sbjct: 259 KMLDAVLLNMRTHGRIAACGMISQYNLEHPDGVHNLIVVVHKRIRIQGFISFDYFGQYSK 318

Query: 292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           FL+ V+P IREGK+ YVEDIAEG+E+APAALVGLF+GRNVGKQ+VAVA
Sbjct: 319 FLDFVLPYIREGKITYVEDIAEGIESAPAALVGLFSGRNVGKQVVAVA 366

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa]

 Score =  489 bits (1260), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 239/341 (70%), Positives = 278/341 (81%), Gaps = 8/341 (2%)

Query: 6   EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS 65
           E VSNK+VI  +YV G  KESDM IT+ +IKLKV E   + VL+KNLYLSCDPYMR RM 
Sbjct: 7   EVVSNKQVIFKDYVPGVLKESDMYITTSTIKLKVPEDCTNGVLVKNLYLSCDPYMRNRMR 66

Query: 66  KLDRPSFVDSFHPGE-------LKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKI 118
              + S++    PG         K       +Y K D +WG TGWEEYSL+TA + L KI
Sbjct: 67  NF-QGSYISPLKPGSPISGRGVAKVLDSRHPDYKKGDFIWGMTGWEEYSLITATETLFKI 125

Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
              DVPLSYYTGILGMPG+TAYAG YE+CSPKKGE+V++SAASGAVGQLVGQFAKL GCY
Sbjct: 126 HDKDVPLSYYTGILGMPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCY 185

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSK+KVDLLKNKFGFDDAFNYKEE DLDAALKR FP GIDIYFENVGGKMLDAV+
Sbjct: 186 VVGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVV 245

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           LNMR+RGRI+VCGM+SQYNLE+PEGVHNL  L+ KRI +EGFL  D++HL+PK+L++V+P
Sbjct: 246 LNMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLP 305

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I++GK+VYVEDIAEGLENAPAAL GLF GRN+GKQ+VAV+
Sbjct: 306 YIKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVS 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342898879|gb|AEL78825.1| ketone/zingerone synthase 1 [Rubus idaeus]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/339 (70%), Positives = 282/339 (83%), Gaps = 8/339 (2%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           VSNK+VI  +YVTGFPKESDM++T+ SI LK+ +GS   +LLKNLYLSCDPYMR RM+  
Sbjct: 9   VSNKQVIFRDYVTGFPKESDMELTTRSITLKLPQGSTG-LLLKNLYLSCDPYMRARMTNH 67

Query: 68  DRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQH 120
            R S+VDSF PG   + + +  +       +   DLVWG TGWEEYS++TA + L KI +
Sbjct: 68  HRLSYVDSFKPGSPIIGYGVARVLESGNPKFNPGDLVWGFTGWEEYSVITATESLFKIHN 127

Query: 121 TDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV 180
           TDVPLSYYTG+LGMPG+TAYAG YE+CSPKKGE VYVSAASGAVGQLVGQFAKL GCYVV
Sbjct: 128 TDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVYVSAASGAVGQLVGQFAKLTGCYVV 187

Query: 181 GSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLN 240
           GSAGSKEKVDLLKNKFGFD+AFNYKEE DLDAAL+R FP GIDIYFENVGGKMLDAVL N
Sbjct: 188 GSAGSKEKVDLLKNKFGFDEAFNYKEEADLDAALRRYFPDGIDIYFENVGGKMLDAVLPN 247

Query: 241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAI 300
           MR +GRIAVCGMISQYNLE+PEGV NL  LI K++R+EGF+   YYHLY KFLE V+P I
Sbjct: 248 MRPKGRIAVCGMISQYNLEQPEGVRNLMALIVKQVRMEGFMVFSYYHLYGKFLETVLPYI 307

Query: 301 REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++GK+ YVED+ +GL+NAPAAL+GL++GRNVGKQ+V V+
Sbjct: 308 KQGKITYVEDVVDGLDNAPAALIGLYSGRNVGKQVVVVS 346

Source: Rubus idaeus

Species: Rubus idaeus

Genus: Rubus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2097795	350	AT3G03080 [Arabidopsis thalian	0.997	0.965	0.693	4.9e-124
TAIR|locus:2148166	343	AT5G16990 [Arabidopsis thalian	0.973	0.962	0.688	9.2e-123
TAIR|locus:2148131	345	AER "alkenal reductase" [Arabi	0.970	0.953	0.678	2.3e-119
TAIR|locus:2148186	345	AT5G17000 [Arabidopsis thalian	0.970	0.953	0.666	7.7e-119
TAIR|locus:2148116	346	AT5G16960 [Arabidopsis thalian	0.970	0.950	0.673	9.8e-119
TAIR|locus:2028736	351	AT1G26320 [Arabidopsis thalian	0.991	0.957	0.668	6.9e-118
UNIPROTKB|Q6WAU0	342	Q6WAU0 "(+)-pulegone reductase	0.976	0.967	0.632	2.7e-116
TAIR|locus:2153759	353	AT5G37980 [Arabidopsis thalian	0.973	0.934	0.652	2.4e-115
TAIR|locus:2153799	353	AT5G37940 [Arabidopsis thalian	0.973	0.934	0.640	1.2e-113
TAIR|locus:2154041	353	AT5G38000 [Arabidopsis thalian	0.973	0.934	0.637	6.6e-113

TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)]

 Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
 Identities = 242/349 (69%), Positives = 278/349 (79%)

Query:     1 MAAEQEA-VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPY 59
             MA    A V+NK+VIL +YVTGFPKESD+  T  +I LK+ EGSK TVL+KNLYLSCDPY
Sbjct:     1 MATSGNATVANKQVILRDYVTGFPKESDLIFTDSTIDLKIPEGSK-TVLVKNLYLSCDPY 59

Query:    60 MRWRMSKLD--RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVT 110
             MR RM K D    +    + PGE    F +  +      +Y K DL+WG  GW EYSL+T
Sbjct:    60 MRIRMGKPDPGTAALAPHYIPGEPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLIT 119

Query:   111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQ 170
                   KIQHTDVPLSYYTG+LGMPG+TAYAG YE+CSPKKGE V+VSAASGAVGQLVGQ
Sbjct:   120 PDFSHYKIQHTDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQ 179

Query:   171 FAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG 230
             FAK+ GCYVVGSAGS EKVDLLKNKFGFDDAFNYK EPDL+AALKRCFP+GIDIYFENVG
Sbjct:   180 FAKIMGCYVVGSAGSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVG 239

Query:   231 GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP 290
             GKMLDAVLLNM+L GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  DY+  + 
Sbjct:   240 GKMLDAVLLNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHL 299

Query:   291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             KFL+ V+P IREGK+ YVED+ EGLEN P+AL+GLF G+NVGKQL+AVA
Sbjct:   300 KFLDFVLPYIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVA 348

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)]

 Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
 Identities = 234/340 (68%), Positives = 275/340 (80%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +NK+VI  ++V+GFPKESD   T+ +++L+V EGSK +VL+KNLYLSCDPYMR RM K D
Sbjct:     3 TNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSK-SVLVKNLYLSCDPYMRSRMGKPD 61

Query:    69 RPS-FVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQ 119
               S    ++ PG+    + +  +      +Y K DL+WG  GWEEYS++T    +  KIQ
Sbjct:    62 PSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKIQ 121

Query:   120 HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV 179
             HTDVPLSYYTG+LGMPG+TAYAG YEVCSPKKGE VYVSAASGAVGQLVGQFAK+ GCYV
Sbjct:   122 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYV 181

Query:   180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
             VGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP+GID+YFENVGGKMLDAVLL
Sbjct:   182 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLL 241

Query:   240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
             NM   GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  YPKFLELV+P 
Sbjct:   242 NMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLPR 301

Query:   300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             I+EGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V +A
Sbjct:   302 IKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIA 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
 Identities = 232/342 (67%), Positives = 271/342 (79%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +NK+VIL +YV+GFP ESD   T+ +++L+V EG+ ++VL+KNLYLSCDPYMR RM K D
Sbjct:     4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGKPD 62

Query:    69 RPS---FVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIK 117
              PS      ++ PG+    + +  I      +Y K DL+WG   WEEYS++T       K
Sbjct:    63 -PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFK 121

Query:   118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             IQHTDVPLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQ AK+ GC
Sbjct:   122 IQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC 181

Query:   178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV 237
             YVVGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP GIDIYFENVGGKMLDAV
Sbjct:   182 YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAV 241

Query:   238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
             L+NM + GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF+  D+Y  Y KFLE V+
Sbjct:   242 LVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVL 301

Query:   298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             P IREGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V VA
Sbjct:   302 PHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP;IMP

GO:0032440 "2-alkenal reductase [NAD(P)

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1170 (416.9 bits), Expect = 7.7e-119, P = 7.7e-119
 Identities = 228/342 (66%), Positives = 269/342 (78%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +NK+V+L NYV+GFPKESD    + +++ K+  GS ++VL+KNLYLSCDPYMR RM K D
Sbjct:     4 TNKQVVLKNYVSGFPKESDFDFKTTTVEFKLPGGS-NSVLVKNLYLSCDPYMRIRMGKPD 62

Query:    69 RPS---FVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIK 117
              PS      ++ PG+    + +  +      +Y K DL+WG  GWEEYS++T    +  K
Sbjct:    63 -PSTAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMTHMHFK 121

Query:   118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             IQHTD+PLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQFAK+ GC
Sbjct:   122 IQHTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGC 181

Query:   178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV 237
             YVVGSAGS EKVDLLK KFGFDDAFNYKEEPDL AALKRCFP GIDIYFENVGGKMLDAV
Sbjct:   182 YVVGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAV 241

Query:   238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
             LLNM   GRIAVCGMISQYNLE  EGVHNL  +I KRIR++GF   D+Y  Y KFL+ V+
Sbjct:   242 LLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVL 301

Query:   298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             P I+EGK+ YVED+A+GLE  P ALVGLF G+NVGKQ+V +A
Sbjct:   302 PHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIA 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)]

 Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
 Identities = 229/340 (67%), Positives = 272/340 (80%)

Query:    10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD- 68
             NK+V+L +YVTGF KESD+ ITS +I L+V +GS  T L+KNLYLSCDPYMR RM K D 
Sbjct:     6 NKQVVLLDYVTGFAKESDLVITSTTIDLRVLKGSM-TALVKNLYLSCDPYMRNRMRKPDP 64

Query:    69 -RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQ 119
               P+   SF PG+    F +  +      +Y + DL+WG+ GWEEYS++T  P L  KI 
Sbjct:    65 LSPATAQSFTPGKPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIH 124

Query:   120 HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV 179
             HT+ PLSYYTG+LGMPG+TAY G YE+C+PKKG+ V+VSAASGAVGQLVGQFAKL GCYV
Sbjct:   125 HTNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYV 184

Query:   180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
             VGSAGSKEKVDLLKNKFGFDDAFNYKEE +L  ALKRCFP+GIDIYFENVGGKMLDAV+L
Sbjct:   185 VGSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVIL 244

Query:   240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
             NMR  GRIA CGMISQYNL+ PEG++ L  +  KRIR+EGF   DY+H Y +FLE V+P 
Sbjct:   245 NMRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPY 304

Query:   300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             I+EGK+ YVED+A+GLE+APAALVGLF G+NVGKQLV V+
Sbjct:   305 IKEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVS 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1161 (413.8 bits), Expect = 6.9e-118, P = 6.9e-118
 Identities = 232/347 (66%), Positives = 271/347 (78%)

Query:     3 AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW 62
             AE   V+NK++I  +YVTGFPKESD+KIT+ +I L++ EGS  +VL+KNLYLSCDPYMR 
Sbjct:     4 AEAVTVTNKQIIFPDYVTGFPKESDLKITTTTIDLRLPEGST-SVLVKNLYLSCDPYMRI 62

Query:    63 RMSKLD--RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQ 113
              M K D    S V  +  G   +   +  +      +Y K DL+WG  GWEEYS++T   
Sbjct:    63 CMGKPDPLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTT 122

Query:   114 LL-IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFA 172
                 KI+HTDVPLSYYTG+LGMPG+TAYAG YEVCSPKKGE V+VSAASGAVGQLVGQFA
Sbjct:   123 YSHFKIEHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFA 182

Query:   173 KLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK 232
             KL GCYVVGSAGSKEKV LLK KFGFDDAFNYKEE D  AALKR FP+GIDIYFENVGGK
Sbjct:   183 KLMGCYVVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGK 242

Query:   233 MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF 292
             MLDAVL+NM+L GR+AVCGMISQYNL  PEGVHNL  ++ KRI+L+GF   D+Y  YPKF
Sbjct:   243 MLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKF 302

Query:   293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             L+ V+P IREGK+ YVEDIAEG E+ P+AL+GLF G+NVGKQL  VA
Sbjct:   303 LDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVA 349

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)]

 Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
 Identities = 215/340 (63%), Positives = 276/340 (81%)

Query:     8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
             V NK+++L+NY+ G  K+SD+ + + +I +++ +G    +L+KNLYLS +PY+  RM KL
Sbjct:     2 VMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGKL 61

Query:    68 DRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGS-TGWEEYSLVTAPQLLIKIQ 119
             D P F DS  PG   + + +  +      +Y K +L+WGS  GWEEY+L+  P  L KIQ
Sbjct:    62 DIPQF-DSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120

Query:   120 HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV 179
               DVPLSYY GILGMPG+TAYAG +E+CSPKKGE V+V+AA+G+VGQLVGQFAK+ GCYV
Sbjct:   121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180

Query:   180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
             VGSAGSKEKVDLLKNKFGFDDAFNYKEE D D ALKR FP+GIDIYF+NVGGKML+AV+ 
Sbjct:   181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240

Query:   240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
             NMR+ GRIAVCGM+SQY+L++PEGVHNL +LI K+IR++GF+  DYYHLYPKFLE+V+P 
Sbjct:   241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300

Query:   300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             I+EGK+ YVEDI+EGLE+AP+AL+G++ GRNVG Q+VAV+
Sbjct:   301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVS 340

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052579 "(+)-pulegone reductase, (+)-isomenthone as substrate, activity" evidence=IDA

GO:0052580 "(+)-pulegone reductase, (-)-menthone as substrate, activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)]

 Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
 Identities = 223/342 (65%), Positives = 269/342 (78%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +N +VIL NYV+GFPKESD+ I + ++ L+V  GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSM-AVLVKNLYLSCDPFSRIRMEKPD 69

Query:    69 --RPSFVD-SFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVT-APQLLIK 117
                P+ V  ++  G+    F +         NY   DL+WG  GWEEYS++T  P    K
Sbjct:    70 PSSPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             I HTDVPLS+YTG+LG+PG+TAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+AGC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV 237
             YVVGSA SKEKVDLLK KFG+D+AFNYKEE DL AALKRCFP+GIDIYFENVGGKMLDAV
Sbjct:   190 YVVGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAV 249

Query:   238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
             L NMR  GRIA CGMISQYNL++PEGVHNL  ++ KRIR++GF A +++  Y KFL+ ++
Sbjct:   250 LENMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFIL 309

Query:   298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             P +REGK+ YVEDIA+GLEN P+AL+GLF G+NVGKQLVAVA
Sbjct:   310 PYVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)]

 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 219/342 (64%), Positives = 265/342 (77%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +N +VIL +YV+GFPK+SD+ I + +I L+V  GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVILRDYVSGFPKQSDLYIATTTIDLRVPPGSM-AVLVKNLYLSCDPHSRTRMGKPD 69

Query:    69 ---RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVT-APQLLIK 117
                + S   +F  G+    F +         NY   DL+WG  GWEEYS++T  P    K
Sbjct:    70 PSSQASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             I HTDVPLS+YTG+LG+PG+TAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+AGC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV 237
             YVVGSA SKEKVDLLK KFG+DDAFNYKEE DL AALKRCFP+GIDIYFENVGGKMLDAV
Sbjct:   190 YVVGSASSKEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDAV 249

Query:   238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
             L NMR  GRIA CGMISQYNL++PEG+HN   ++ KRIR++ F A +++  Y KFL+ ++
Sbjct:   250 LQNMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFIL 309

Query:   298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             P +REGK+ YVEDIA+GLEN P+AL+GLF G+NVGKQLV VA
Sbjct:   310 PHVREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
 Identities = 218/342 (63%), Positives = 263/342 (76%)

Query:     9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
             +N +VI  NYV GFPKESD+ I + ++ L+V  GS   VL+KNLYLSCDP+ R RM K D
Sbjct:    11 TNNQVIFRNYVNGFPKESDLYIAASTVDLRVPPGSM-AVLVKNLYLSCDPHSRTRMGKPD 69

Query:    69 --RP-SFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVT-APQLLIK 117
                P S   +F  G+    F +         NY   DL+WG  GWEEYS++T  P    K
Sbjct:    70 PSSPASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFK 129

Query:   118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             I HTDVPLS+YTG+LG+PG+TAY G YE+CSPKKGE V+VSAASGAVGQLVGQFAK+AGC
Sbjct:   130 IHHTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGC 189

Query:   178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV 237
             YVVGSA S+EKVDLLK KFG+DDAFNYKEE DL AALKRCFP+GIDIYFENVGGKML+AV
Sbjct:   190 YVVGSASSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAV 249

Query:   238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
             L NMR  GRIA CGMISQYNL+KPE +HN   ++ KRIR++GF A +++  Y KFL+ ++
Sbjct:   250 LENMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFIL 309

Query:   298 PAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             P +REGK+ YVEDI++GLEN P+AL+GLF G+NVGKQLV VA
Sbjct:   310 PHVREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVA 351

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q28719	PTGR1_RABIT	1, ., 3, ., 1, ., 7, 4	0.3963	0.9321	0.9054	yes	no
Q3SZJ4	PTGR1_BOVIN	1, ., 3, ., 1, ., 7, 4	0.4047	0.9410	0.9696	yes	no
Q6WAU0	PULR_MENPI	1, ., 3, ., 1, ., 8, 1	0.6323	0.9764	0.9678	N/A	no
P97584	PTGR1_RAT	1, ., 3, ., 1, ., 7, 4	0.4119	0.9439	0.9726	yes	no
Q9C0Y6	YKM8_SCHPO	1, ., -, ., -, ., -	0.4154	0.9705	0.9426	yes	no
Q9EQZ5	PTGR1_CAVPO	1, ., 3, ., 1, ., 7, 4	0.4053	0.9410	0.9696	yes	no
O34812	YFMJ_BACSU	1, ., -, ., -, ., -	0.4058	0.9557	0.9557	yes	no
Q14914	PTGR1_HUMAN	1, ., 3, ., 1, ., 7, 4	0.4011	0.9321	0.9604	yes	no
Q29073	PTGR1_PIG	1, ., 3, ., 1, ., 7, 4	0.4017	0.9410	0.9696	yes	no
Q91YR9	PTGR1_MOUSE	1, ., 3, ., 1, ., 7, 4	0.4188	0.9321	0.9604	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.976
3rd Layer	1.3.1.74	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	0.0
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	1e-165
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	1e-145
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-118
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	1e-101
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	1e-70
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	2e-63
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	6e-48
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-27
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	9e-26
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	2e-23
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-22
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-20
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-19
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	7e-19
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-18
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	4e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-16
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-15
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-15
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	8e-15
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	9e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	6e-14
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	9e-14
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	1e-13
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-13
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	4e-12
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-11
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-10
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-10
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	6e-10
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	9e-10
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-09
smart00829	287	smart00829, PKS_ER, Enoylreductase	4e-09
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	6e-09
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	3e-08
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	7e-08
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-07
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-07
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	3e-07
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	9e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-07
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	9e-07
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-06
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-06
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	6e-06
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-06
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	1e-05
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-05
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	3e-05
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-05
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	5e-05
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	6e-05
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	6e-05
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	6e-05
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	8e-05
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	8e-04

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score =  567 bits (1463), Expect = 0.0
 Identities = 231/338 (68%), Positives = 261/338 (77%), Gaps = 7/338 (2%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           V NK+VIL  YVTGFPKESD+++ +  + LKV  G    VL+KNLYLSCDPYMR RM   
Sbjct: 1   VRNKQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGH 60

Query: 68  DRPSFVDSFHPGEL-------KFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQH 120
           D   ++  F PGE+       K       ++   DLVWG TGWEEYSL+   Q L KI H
Sbjct: 61  DDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDH 120

Query: 121 TDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV 180
           TDVPLSYY G+LGMPG+TAYAG YEVC PKKGE V+VSAASGAVGQLVGQ AKL GCYVV
Sbjct: 121 TDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVV 180

Query: 181 GSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLN 240
           GSAGS EKVDLLKNK GFDDAFNYKEEPDLDAALKR FP GIDIYF+NVGGKMLDAVLLN
Sbjct: 181 GSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLN 240

Query: 241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAI 300
           M L GRIA CGMISQYNLE PEGV NL  +I KR++++GFL GDY H YP+FLE +   I
Sbjct: 241 MNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYI 300

Query: 301 REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
           +EGK+ YVEDIA+GLE+AP A VGLFTG N+GKQ+V V
Sbjct: 301 KEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score =  463 bits (1193), Expect = e-165
 Identities = 215/346 (62%), Positives = 263/346 (76%), Gaps = 12/346 (3%)

Query: 4   EQEAVSNKRVILSNYVTGFPKESDMKITSG-SIKLKVAEGSKDTVLLKNLYLSCDPYMRW 62
           E + V NK+VIL NY+ G PKE+DM++  G  I+LK  +GS    L+KNLYLSCDPYMR 
Sbjct: 3   EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGS-GAFLVKNLYLSCDPYMRG 61

Query: 63  RMSKLDRPSFVDSFHPGEL--KFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQL- 114
           RM      S++  F PG+    F +  +      N+   DL+ G TGWEEYSL+ +    
Sbjct: 62  RMRDF-HDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQ 120

Query: 115 LIKIQ-HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAK 173
           L KIQ   D+PLSY+ G+LGM G TAYAG YEVCSPKKG+ V+VSAASGAVGQLVGQ AK
Sbjct: 121 LRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK 180

Query: 174 LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM 233
           L GCYVVGSAGS +KVDLLKNK GFD+AFNYKEEPDLDAALKR FP+GIDIYF+NVGG M
Sbjct: 181 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDM 240

Query: 234 LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL 293
           LDA LLNM++ GRIAVCGM+S  +L   +G+HNL  LI KRIR++GFL  DY HL+P+FL
Sbjct: 241 LDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFL 300

Query: 294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           E V    ++GK+VY+ED++EGLE+APAALVGLF+G+NVGKQ++ VA
Sbjct: 301 ENVSRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346

Length = 348

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score =  413 bits (1063), Expect = e-145
 Identities = 154/340 (45%), Positives = 200/340 (58%), Gaps = 23/340 (6%)

Query: 9   SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           SN++V+L+    G P   D ++        + E     VL++ LYLS DPYMR  MS  D
Sbjct: 1   SNRQVVLAKRPEGPPPPDDFELVEV----PLPELKDGEVLVRTLYLSVDPYMRGWMS--D 54

Query: 69  RPSFVDSFHPGELKFWILH-----------IQNYAKDDLVWGSTGWEEYSLVTAPQLLIK 117
             S+      GE     +              ++   DLV G  GW+EY++V     L K
Sbjct: 55  AKSYSPPVQLGE----PMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRK 110

Query: 118 IQHTD-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG 176
           +  +  +PLS Y G+LGM G+TAY GL E+  PK GE V VSAA+GAVG +VGQ AKL G
Sbjct: 111 LDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLG 170

Query: 177 CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDA 236
             VVG AGS EK   L  + GFD A NYK  PDL  ALK   P GID+YF+NVGG++LDA
Sbjct: 171 ARVVGIAGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDA 229

Query: 237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELV 296
            L  +   GRIA+CG ISQYN  +P G  NL  +I KR+ ++GF+  DY   +P+ L  +
Sbjct: 230 ALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAEL 289

Query: 297 IPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
              + EGK+ Y ED+ EGLENAP A +GLFTG+N GK +V
Sbjct: 290 AKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score =  344 bits (885), Expect = e-118
 Identities = 155/340 (45%), Positives = 207/340 (60%), Gaps = 17/340 (5%)

Query: 9   SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
            N+R++L++   G P   D ++     ++ V E  +  VLL+ LYLS DPYMR RMS  D
Sbjct: 8   VNRRIVLASRPEGAPVPDDFRL----EEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS--D 61

Query: 69  RPSFVDSFHPGEL-------KFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHT 121
            PS+      GE+       K    +   +   D+V G +GW+EY++    + L K+  +
Sbjct: 62  APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISD-GEGLRKLDPS 120

Query: 122 DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVG 181
             PLS Y G+LGMPG+TAY GL ++  PK GE V VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 121 PAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVG 180

Query: 182 SAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM 241
            AG  EK D L  + GFD   +YK E D   ALK   P+GID+YFENVGG++LDAVL  +
Sbjct: 181 IAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLL 239

Query: 242 RLRGRIAVCGMISQYN-LEKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPA 299
            L  RI VCG ISQYN  E P G   L  L+ KR+R++GF+    Y   +P+ L  +   
Sbjct: 240 NLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGW 299

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           ++EGK+ Y E I +GLENAP A +GL +G+N GK +V VA
Sbjct: 300 VKEGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339

Length = 340

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score =  301 bits (772), Expect = e-101
 Identities = 137/347 (39%), Positives = 191/347 (55%), Gaps = 34/347 (9%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSI-KLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK 66
           V  K  +L  +  G PKESD ++    +  LK  E     VL + L+LS DPYMR    +
Sbjct: 1   VKAKTWVLKKHFDGKPKESDFELVEEELPPLKDGE-----VLCEALFLSVDPYMRPYSKR 55

Query: 67  LDR---------PSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLV---TAPQL 114
           L+             ++S +             +    +V  S GW  +++      P L
Sbjct: 56  LNEGDTMIGTQVAKVIESKNS-----------KFPVGTIVVASFGWRTHTVSDGKDQPDL 104

Query: 115 --LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFA 172
             L      D+P S   G+LGMPG+TAY GL E+C PK GE V V+ A+GAVG LVGQ A
Sbjct: 105 YKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIA 164

Query: 173 KLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK 232
           K+ GC V+G AGS +KV  LK + GFD  FNYK    L+ ALK   P GID YF+NVGG+
Sbjct: 165 KIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGE 222

Query: 233 MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGDYYHLYPK 291
               VL +M   GR+AVCG IS YN ++P+    + E +I K++++EGF+   +   +P+
Sbjct: 223 FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPE 282

Query: 292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
            L+ ++  I+EGK+ Y E + EG EN P A +G+  G N GK +V V
Sbjct: 283 ALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score =  222 bits (568), Expect = 1e-70
 Identities = 137/334 (41%), Positives = 189/334 (56%), Gaps = 19/334 (5%)

Query: 11  KRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR 69
           K   L  +  G+P +SD ++ +  +  L   E     VLL+ L+LS DPYMR    +L  
Sbjct: 2   KTWTLKKHFVGYPTDSDFELKTVELPPLNNGE-----VLLEALFLSVDPYMRVAAKRLKE 56

Query: 70  PSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVPL 125
              +     G+    ++  +N A  K  +V  S GW  +S+     L  L+      +PL
Sbjct: 57  GDTM----MGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDTLPL 112

Query: 126 SYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS 185
           S   G +GMPG+TAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS
Sbjct: 113 SLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGS 172

Query: 186 KEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRG 245
            EKV  LK K GFD AFNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  G
Sbjct: 173 DEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFG 231

Query: 246 RIAVCGMISQYNL--EKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIRE 302
           RIA+CG IS YN     P G    E +I + +R+EGF+   +   +  K L+ ++  + E
Sbjct: 232 RIAICGAISTYNRTGPLPPG-PPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLE 290

Query: 303 GKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           GK+ Y E + EG EN PAA +G+  G N+GK +V
Sbjct: 291 GKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score =  204 bits (521), Expect = 2e-63
 Identities = 126/362 (34%), Positives = 188/362 (51%), Gaps = 52/362 (14%)

Query: 10  NKRVILSNY--VTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           NKRV+L++     G P   + ++   ++  ++ EG    VL++ LYLS DPYMR RM++ 
Sbjct: 3   NKRVVLNSRPGKNGNPVAENFRVEECTLPDELNEG---QVLVRTLYLSVDPYMRCRMNE- 58

Query: 68  DRPSFVDSFHPGELKFWILH---------------IQNYAKDDLV----WGSTGWEEYSL 108
              +  D   P     W L                 Q +A  D+V    W    W+ Y++
Sbjct: 59  --DTGTDYLAP-----WQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWP---WQTYAV 108

Query: 109 VTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKKGEYVYVSAASGAV 164
           +     L K+  Q  D  LSY+ G +G+PG+TA  G+ E    +P   + + VS A+GA 
Sbjct: 109 LD-GSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGAC 167

Query: 165 GQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID 223
           G L GQ  +L GC  VVG  GS EK  LLK++ GFD A NYK + ++   L+   P+G+D
Sbjct: 168 GSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVD 226

Query: 224 IYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP------EGVHNLEQLIGKR-IR 276
           +YF+NVGG++ D V+  M     I +CG ISQYN + P      E     E ++ +R I 
Sbjct: 227 VYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEAT---EAILKERNIT 283

Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
            E FL  +Y   + + +  +   ++EGK+   E + EGLENA  A   +  G N+GKQ+V
Sbjct: 284 RERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIV 343

Query: 337 AV 338
            V
Sbjct: 344 KV 345

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  163 bits (416), Expect = 6e-48
 Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 8/207 (3%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+TA   L EV   K GE V V+AA+G  GQ   Q AKLAGC+V+G+  S EK + LK+ 
Sbjct: 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS- 182

Query: 196 FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQ 255
            G D   NYK E DL   LK+ +P+G+D+ +E+VGG+M D  + N+ L+GR+ V G IS 
Sbjct: 183 LGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISG 241

Query: 256 YNLEK---PEGVHNL-EQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDI 311
           Y       P     L  +L+ K   + GF    Y  L P+ L+ ++   + GK+V   D 
Sbjct: 242 YQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP 301

Query: 312 AE--GLENAPAALVGLFTGRNVGKQLV 336
               GLE+   A+  L++G+N+GK +V
Sbjct: 302 TRFRGLESVADAVDYLYSGKNIGKVVV 328

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  109 bits (274), Expect = 2e-27
 Identities = 80/269 (29%), Positives = 113/269 (42%), Gaps = 21/269 (7%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSY-YTGI 131
           V  F  G+                  G  G+ EY +V A  L+         LS+     
Sbjct: 76  VTGFKVGDRVA-------ALGGVGRDG--GYAEYVVVPADWLVPLPDG----LSFEEAAA 122

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L + G+TA+  L++    K GE V V  A+G VG    Q AK  G  VV    S EK++L
Sbjct: 123 LPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLEL 182

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           LK + G D   NY+EE  ++   +    +G+D+  + VGG    A L  +   GR+   G
Sbjct: 183 LK-ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIG 241

Query: 252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH-LYPKFLELVIPAIREGKMVYVED 310
            +S      P    NL  L+GKR+ L G   G        + L  +   +  GK+  V D
Sbjct: 242 ALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVID 297

Query: 311 IAEGLENAPAALVGLF-TGRNVGKQLVAV 338
               L  APAA   L    R  GK ++ V
Sbjct: 298 RVYPLAEAPAAAAHLLLERRTTGKVVLKV 326

Length = 326

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  104 bits (262), Expect = 9e-26
 Identities = 78/258 (30%), Positives = 108/258 (41%), Gaps = 33/258 (12%)

Query: 95  DLVW-GSTGWE-------EYSLVTAPQLLIKIQHTDVPL----SYYTGI-LGMPGVTAYA 141
           D VW  + GW        EY +V A QL        VPL    S+  G  LG+P +TAY 
Sbjct: 83  DRVWLTNLGWGRRQGTAAEYVVVPADQL--------VPLPDGVSFEQGAALGIPALTAYR 134

Query: 142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA 201
            L+     K GE V V   SGAVG    Q A+ AG  V+ +A S E  +L++   G D  
Sbjct: 135 ALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQA-GADAV 193

Query: 202 FNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 261
           FNY+ E   D  L     QG+D+  E +    L   L  +   GRI V      Y     
Sbjct: 194 FNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVV------YGSGGL 247

Query: 262 EGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF---LELVIPAIREGKMVYVEDIAEGLENA 318
            G   +  L+ K   + G L   Y     +     E +   + +G +  V      LE A
Sbjct: 248 RGTIPINPLMAKEASIRGVLL--YTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEA 305

Query: 319 PAALVGLFTGRNVGKQLV 336
            AA   + +G  +GK ++
Sbjct: 306 AAAHEAVESGGAIGKVVL 323

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 97.0 bits (242), Expect = 2e-23
 Identities = 64/197 (32%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL-GMPGVTAYAGLYEVCSPKKGEYVYVSAA 160
           G+ EY +V A  L+         LS     L   P  TAY  L      K G+ V V  A
Sbjct: 88  GFAEYVVVPADNLVPLPDG----LSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGA 143

Query: 161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ 220
            G VG L  Q AK AG  V+ +  S EK++L K + G D   +YKEE DL+  L+     
Sbjct: 144 GG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELRLTGGG 200

Query: 221 GIDIYFENVGGKM-LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG 279
           G D+  + VGG   L   L  +R  GRI V G  S            L +L+ K + + G
Sbjct: 201 GADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDD-----LRRLLFKELTIIG 255

Query: 280 FLAGDYYHLYPKFLELV 296
              G     + + L+L+
Sbjct: 256 STGGTRED-FEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 95.2 bits (238), Expect = 2e-22
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 27/209 (12%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TA+  L+++   K GE V +   +  VG    Q AK  G  V+ +AGS+EK++  +   G
Sbjct: 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALG 184

Query: 198 FDDAFNYKEEPDLDAALKRCF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQY 256
            D A NY+ E D    +K     +G+D+  + VGG  L   L  +   GR+ + G++   
Sbjct: 185 ADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGA 243

Query: 257 NLEKPEGVHNLEQLIGKRIRLEGF------------LAGDYYHLYPKFLELVIPAIREGK 304
             E      +L  L+ KR+ L G             LA         F E V P    G+
Sbjct: 244 KAEL-----DLAPLLRKRLTLTGSTLRSRSLEEKAALAAA-------FREHVWPLFASGR 291

Query: 305 MVYVEDIAEGLENAPAALVGLFTGRNVGK 333
           +  V D    LE A  A   + +  ++GK
Sbjct: 292 IRPVIDKVFPLEEAAEAHRRMESNEHIGK 320

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 85.1 bits (211), Expect = 2e-20
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 11/138 (7%)

Query: 163 AVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP-Q 220
            VG    Q AK  G   V+    S+EK++L K + G D   NY++E D    ++     +
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58

Query: 221 GIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG 279
           G+D+  + VG    L+  L  +R  GR+ V G+     +  P     L  L+ K + + G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILG 113

Query: 280 FLAGDYYHLYPKFLELVI 297
            L G     + + LEL+ 
Sbjct: 114 SLGGGREE-FEEALELLA 130

Length = 131

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 86.8 bits (216), Expect = 2e-19
 Identities = 65/258 (25%), Positives = 103/258 (39%), Gaps = 45/258 (17%)

Query: 90  NYAKDDLVWGSTGWE------EYSLVTAPQLLIK---IQHTD---VPLSYYTGILGMPGV 137
            +   D V+G T +       EY +V A +L +K   +   +   +PL+         G+
Sbjct: 80  GFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLA---------GL 130

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TA+  L+E+   K G+ V +  A+G VG    Q AK  G  V+ +A S    D L+   G
Sbjct: 131 TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATA-SAANADFLR-SLG 188

Query: 198 FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIA-VCGMISQY 256
            D+  +Y +     AA     P G+D   + VGG+ L   L  ++  GR+  + G     
Sbjct: 189 ADEVIDYTKGDFERAAA----PGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAE 244

Query: 257 NLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM-VYVEDIAEGL 315
              K  GV           R              + L  +   +  GK+   V+ +   L
Sbjct: 245 QAAKRRGV-----------RAGFVFV----EPDGEQLAELAELVEAGKLRPVVDRVFP-L 288

Query: 316 ENAPAALVGLFTGRNVGK 333
           E+A  A   L +G   GK
Sbjct: 289 EDAAEAHERLESGHARGK 306

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 85.6 bits (213), Expect = 7e-19
 Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 12/201 (5%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TAY  L      + GE V V  A+G VG    Q AK  G  V+ +A S+EK+ L +   G
Sbjct: 126 TAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALG 184

Query: 198 FDDAFNYKEEPDLDAALK-RCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQY 256
            D   +Y  +PDL   +K     +G+D+ ++ VGG + +A L ++   GR+ V G  S  
Sbjct: 185 ADHVIDY-RDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASG- 242

Query: 257 NLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK----FLELVIPAIREGKMVYVEDIA 312
             E P+   NL  L+ K I + G   G Y    P+     L  +   + EGK+       
Sbjct: 243 --EIPQIPANL--LLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAV 298

Query: 313 EGLENAPAALVGLFTGRNVGK 333
             LE A  AL  L   +  GK
Sbjct: 299 FPLEQAAEALRALADRKATGK 319

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 209
           + GE V V  A   VG    Q AKL G  V+ +AGS++K++  K   G D   +Y++E  
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223

Query: 210 LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQ 269
           +    +    +G+D+  E+VG    +  L ++   GR+  CG  + Y     E   +L  
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278

Query: 270 LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGR 329
           +  +++ + G   G         L+  +  +  GK+  V D    LE A  A   L +  
Sbjct: 279 VFWRQLSILGSTMGT-----KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESRE 333

Query: 330 NVGK 333
             GK
Sbjct: 334 QFGK 337

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.4 bits (207), Expect = 4e-18
 Identities = 55/221 (24%), Positives = 85/221 (38%), Gaps = 50/221 (22%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTG--------WEEYSLVTAPQLLIK---IQHT 121
           V  F  G               D V+G  G          EY++V A  L +K   +   
Sbjct: 76  VTRFRVG---------------DEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMR 120

Query: 122 D---VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
           +   +PL          G+TA+ GL +  + + G+ V +   +G VG +  Q AK AG  
Sbjct: 121 EAAALPL---------VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR 171

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           V  +A S EK    +   G D    Y+E    +   +    +G D+ F+ VGG+ LDA  
Sbjct: 172 VYATASS-EKAAFAR-SLGADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASF 228

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG 279
             + L GR+      +          H+L  L  +     G
Sbjct: 229 EAVALYGRVVSILGGAT---------HDLAPLSFRNATYSG 260

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 79.1 bits (196), Expect = 1e-16
 Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 13/199 (6%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+TA+  L+ +   K G+ V V    G V     QFAK AG  V+ ++ S EK++  K  
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202

Query: 196 FGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
            G D   NY+  PD    + +    +G+D   E  G   L   +  +   G I++ G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262

Query: 255 QYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEG 314
                  E    L  L+ K   L G   G        F  +   AI   ++  V D    
Sbjct: 263 -----GFEAPVLLLPLLTKGATLRGIAVGSRAQ----FEAMNR-AIEAHRIRPVIDRVFP 312

Query: 315 LENAPAALVGLFTGRNVGK 333
            E A  A   L +G + GK
Sbjct: 313 FEEAKEAYRYLESGSHFGK 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 22/241 (9%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTGILGMPGV--TAYAGLYEVCSPKKGEYVYV 157
           G+ EY  V A Q+L       VP  LS       +P    T ++ L++    K GE V +
Sbjct: 93  GYAEYVAVPAGQVL------PVPEGLSLVEAA-ALPETFFTVWSNLFQRGGLKAGETVLI 145

Query: 158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 217
              +  +G    Q AK  G  V  +AGS EK        G D A NY+EE  ++      
Sbjct: 146 HGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEALGADIAINYREEDFVEVVKAET 204

Query: 218 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
             +G+D+  + VGG  L+  +  + L GRI   G          +   +L  L+ KR+ +
Sbjct: 205 GGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGF-----QGGRKAELDLGPLLAKRLTI 259

Query: 278 EGFL-----AGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVG 332
            G         +   +  +  E V P +  G++  V D    LE+A  A   + +G ++G
Sbjct: 260 TGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIG 319

Query: 333 K 333
           K
Sbjct: 320 K 320

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 15/205 (7%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L + G+TA   L +    K G+ V ++ ASG VG    Q AK  G +V G   ++   +L
Sbjct: 124 LPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTR-NAEL 182

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV--LLNMRLRGR-IA 248
           +++  G D+  +Y  E   D        +  D+ F+ VG          L ++  GR ++
Sbjct: 183 VRS-LGADEVIDYTTE---DFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVS 238

Query: 249 VCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV 308
           V G  S   L        L    G R RL+ FLA        + LE +   + EGK+  V
Sbjct: 239 VGGGPSGLLLVLLLLPLTL--GGGGR-RLKFFLAKP----NAEDLEQLAELVEEGKLKPV 291

Query: 309 EDIAEGLENAPAALVGLFTGRNVGK 333
            D    LE+AP A   L +GR  GK
Sbjct: 292 IDSVYPLEDAPEAYRRLKSGRARGK 316

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 73.6 bits (182), Expect = 8e-15
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK 193
           + G+TA+  L E    K G+ V V AA+G VG L+ Q+AK  G  V+G+  S+EK +L +
Sbjct: 119 LQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178

Query: 194 NKFGFDDAFNYKEEPDLDAALKR-CFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGM 252
              G D   NY++E D    ++     +G+D+ ++ VG    +  L ++R RG +   G 
Sbjct: 179 AA-GADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGN 236

Query: 253 IS 254
            S
Sbjct: 237 AS 238

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 9e-15
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 11/208 (5%)

Query: 137 VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF 196
           +TA+  L +    KKG+ V + A +  VG    Q A+  G   + +  S+EKVD  K   
Sbjct: 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-L 184

Query: 197 GFDDAFNYKEEPDLDAALKRCF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQ 255
                  Y +E      +K+    +G+++  + VGG  L      + + G+  V G +  
Sbjct: 185 AAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGG 244

Query: 256 YNLEKPEGVHNLEQLIGKRIRLEGFL---AGDYY--HLYPKFLELVIPAIREGKMVYVED 310
             +EK     NL  L+ KR  +         D Y   L   F   V+P + EG++  + D
Sbjct: 245 AKVEKF----NLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVD 300

Query: 311 IAEGLENAPAALVGLFTGRNVGKQLVAV 338
               LE    A   L   +N+GK ++ V
Sbjct: 301 RTYPLEEVAEAHTFLEQNKNIGKVVLTV 328

Length = 334

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.2 bits (175), Expect = 6e-14
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN 194
            G+TAY  L++    + G  + ++  +G VG    Q AK AG  V+ +  SK   + +K 
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182

Query: 195 KFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
             G D   +Y +E   +   +    +G+D   + VGG+   A+   +   G +  
Sbjct: 183 SLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN 194
            +TAY  L+E+ + + G+ V V +A+G VG   GQ  K      VVG+A S  K + LK 
Sbjct: 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTA-SASKHEALKE 181

Query: 195 KFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
             G     +Y+ + D    +K+  P+G+DI  + +GG+        ++  GR+ V G  +
Sbjct: 182 N-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAAN 239

Query: 255 QYNLEKPEGVH-----------NLEQLIGKRIRLEGF----LAGDYYHLYPKFLELVIPA 299
               EK                +  +LI +   + GF    L  +   L     +L +  
Sbjct: 240 LVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKL-LKL 298

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGK 333
             EGK+    D     E    A+  L + +N+GK
Sbjct: 299 YEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGK 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 22/236 (9%)

Query: 102 GWEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAA 160
           G+ EY  V  P+  L+K+   +V       +      TA   L +    KKG+ V V+ A
Sbjct: 117 GFAEY--VKVPERSLVKL-PDNVSDESAA-LAACVVGTAVHAL-KRAGVKKGDTVLVTGA 171

Query: 161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ 220
            G VG    Q AK  G  V+    S EK+ +LK           K   D+          
Sbjct: 172 GGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLG------ 225

Query: 221 GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF 280
           G D+  E VG   ++  L ++   GR+ + G     N+           LI K IR+ G 
Sbjct: 226 GADVVIELVGSPTIEESLRSLNKGGRLVLIG-----NVTPDPAPLRPGLLILKEIRIIGS 280

Query: 281 LAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           ++          +E  +  ++EGK+  V D    LE+   AL  L +G+ VG+ ++
Sbjct: 281 ISAT-----KADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 1/123 (0%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L M  +TAY  L E+   + G+ V ++AAS +VG    Q A  AG  V+ +  + EK D 
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           L    G        EE  +   L+    +G+D+ F+ VGG     +   +   G + V G
Sbjct: 185 LLAL-GAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYG 243

Query: 252 MIS 254
            +S
Sbjct: 244 ALS 246

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 65.6 bits (161), Expect = 4e-12
 Identities = 62/228 (27%), Positives = 93/228 (40%), Gaps = 49/228 (21%)

Query: 131 ILGMPGVTAYAGLYE----VCSPKKGEYVYVSAASGAVGQL-VGQFAKLAGCYVVGSAGS 185
           ILG  G TA   ++       +P+ G  V V+ A+G VG + V   AKL G  VV   G 
Sbjct: 123 ILGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKL-GYTVVALTGK 180

Query: 186 KEKVDLLKNKFGFDDAFNYKE-EPDLDAAL-KRCFPQGIDIYFENVGGKMLDAVLLNMRL 243
           +E+ D LK   G  +  + ++   +    L K  +   ID     VGG +L  +L   + 
Sbjct: 181 EEQADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID----TVGGDVLANLLKQTKY 235

Query: 244 RGRIAVCGMISQYNLEK---P---EGVHNLEQLIG---------KRIRLEGFLAGDYYHL 288
            G +A CG  +   L     P    GV     L+G          R ++   LA +    
Sbjct: 236 GGVVASCGNAAGPELTTTVLPFILRGVS----LLGIDSVNCPMELRKQVWQKLATE---W 288

Query: 289 YPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
            P  LE+V+  I              LE  P A+  L  G++ G+ +V
Sbjct: 289 KPDLLEIVVREI-------------SLEELPEAIDRLLAGKHRGRTVV 323

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 2/123 (1%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           +   G TA  GL ++ +   G+ V V+AA+G +G L+ Q AK AG  VVG+AG   K  L
Sbjct: 124 VVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           ++   G D A +Y      D   +     G+ +  + VGG +  A L  +   GR    G
Sbjct: 183 VR-ALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYG 241

Query: 252 MIS 254
             S
Sbjct: 242 WAS 244

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           +P++Y         +TAY  L ++   +KGE V + AA+G VGQ   Q A+  G  V  +
Sbjct: 89  LPVAY---------LTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFAT 139

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF-PQGIDIYFENVGGKMLDA 236
            GS+EK + L+   G  D      +      + R    +G+D+   ++ G++L A
Sbjct: 140 VGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRA 194

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 68/274 (24%), Positives = 99/274 (36%), Gaps = 45/274 (16%)

Query: 90  NYAKDDLVWGSTG----WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE 145
           +    D V         W  +++V A  L IK+   DV        L +   TAY  L +
Sbjct: 84  SLKPGDWVIPLRPGLGTWRTHAVVPADDL-IKVP-NDVDPEQA-ATLSVNPCTAYRLLED 140

Query: 146 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAF 202
               + G++V  + A+ AVGQ V Q AKL G   +     +  ++ LK      G D   
Sbjct: 141 FVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL 200

Query: 203 NYKEEPDLDAA--LKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVC---GMISQYN 257
             +E   L A   LK        +    VGGK   +     RL          G +S   
Sbjct: 201 TEEELRSLLATELLKSAPGGRPKLALNCVGGK---SATELARLLSPGGTMVTYGGMSGQP 257

Query: 258 LEKPEGVHNLEQLIGKRIRLEGFLAGDYY---------HLYPKFLELVIPAIREGKMVYV 308
           +  P        LI K I L GF    +           +  +  EL    IREGK+   
Sbjct: 258 VTVPTS-----LLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAEL----IREGKLKAP 308

Query: 309 ------EDIAEGLENAPAALVGLFTGRNVGKQLV 336
                 +D  E  ++A A  +    G   GKQ++
Sbjct: 309 PVEKVTDDPLEEFKDALANALKGGGG---GKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 59.0 bits (143), Expect = 6e-10
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 10/191 (5%)

Query: 150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD 209
            KGE++ +  A+G  G +  Q A+L G  +  +A S +K++ LK + G     NY EE D
Sbjct: 119 AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLK-QLGVPHVINYVEE-D 176

Query: 210 LDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGR---IAVCGMISQYNLEKPEGVH 265
            +  + R    +G+D+    + G+ +   L  +   GR   IA+  + S  +++    + 
Sbjct: 177 FEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDL-SVLS 235

Query: 266 NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGL 325
           N +      + L   L  D   +     E+V   + EG++          ++   A   L
Sbjct: 236 NNQSFHS--VDLRKLLLLDPEFIADYQAEMV-SLVEEGELRPTVSRIFPFDDIGEAYRYL 292

Query: 326 FTGRNVGKQLV 336
               N+GK +V
Sbjct: 293 SDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 58.8 bits (143), Expect = 9e-10
 Identities = 61/247 (24%), Positives = 96/247 (38%), Gaps = 23/247 (9%)

Query: 99  GSTG-WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGV---TAYAGLYEVCSPKKGEY 154
           G  G W+EY +  A  L+       VP S       M  +   TA+  L E      G++
Sbjct: 88  GGEGTWQEYVVAPADDLI------PVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDW 141

Query: 155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL 214
           V  +AA+ AVG+++ Q AKL G   +      E+V+ LK   G D+  +     DL   +
Sbjct: 142 VIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKAL-GADEVIDS-SPEDLAQRV 199

Query: 215 K-RCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGK 273
           K      G  +  + VGG+    +  ++R  G +   G++S   +  P  V      I K
Sbjct: 200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSV-----FIFK 254

Query: 274 RIRLEGFLAGDYYH-----LYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTG 328
            I + GF    + H        +    VI  +  G +         LE+   A+      
Sbjct: 255 DITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQP 314

Query: 329 RNVGKQL 335
              GK L
Sbjct: 315 GRGGKVL 321

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 58.2 bits (141), Expect = 2e-09
 Identities = 52/229 (22%), Positives = 82/229 (35%), Gaps = 30/229 (13%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM---PGVTAYAGLYEVCSPKKGEYVYVS 158
           G+ EY +       +      +              P  TAY G  E  + + G  V V 
Sbjct: 122 GFAEY-VRVPADFNLAKLPDGIDE-----EAAALTEPLATAYHGHAERAAVRPGGTVVVV 175

Query: 159 AASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 217
            A G +G L    AKL G   V+    S E+++L K   G D   N  E+      L+  
Sbjct: 176 GA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234

Query: 218 FPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIR 276
             +G D+  E VG    LD  L  +R  G + V G+         +       ++ K + 
Sbjct: 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGV-----YGGEDIPLPAGLVVSKELT 289

Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKM---------VYVEDIAEGLE 316
           L G L       + +     +  +  GK+         + ++D AE  E
Sbjct: 290 LRGSLRPSGREDFER----ALDLLASGKIDPEKLITHRLPLDDAAEAYE 334

Length = 350

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 56.6 bits (138), Expect = 4e-09
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 137 VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF 196
           +TAY  L ++   + GE V + AA+G VGQ   Q A+  G  V  +AGS EK D L+   
Sbjct: 89  LTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-L 147

Query: 197 GFDDA 201
           G  D 
Sbjct: 148 GIPDD 152

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 56.0 bits (136), Expect = 6e-09
 Identities = 64/229 (27%), Positives = 92/229 (40%), Gaps = 48/229 (20%)

Query: 131 ILGMPGVTAYAGLYEV----CSPKKGEYVYVSAASGAVGQL-VGQFAKLAGCYVVGSAGS 185
            LG  G TA   +  +     +P+ G  V V+ A+G VG L V   +KL G  VV S G 
Sbjct: 122 ALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILSKL-GYEVVASTGK 179

Query: 186 KEKVDLLKNKFGFDDAFNYKE-EPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR 244
            E+ D LK + G  +  + ++  P      K  +   +D     VGG  L  VL  ++  
Sbjct: 180 AEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAVD----TVGGHTLANVLAQLKYG 234

Query: 245 GRIAVCGMISQYNLEK---P---EGVHNLEQLIG---------KRIRLEGFLAGDYYHLY 289
           G +A CG+    +L     P    GV     L+G          R      LA D   L 
Sbjct: 235 GAVAACGLAGGPDLPTTVLPFILRGVS----LLGIDSVYCPMALREAAWQRLATD---LK 287

Query: 290 PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
           P+ LE +   I              LE  P AL  +  G++ G+ +V V
Sbjct: 288 PRNLESITREI-------------TLEELPEALEQILAGQHRGRTVVDV 323

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score = 54.1 bits (131), Expect = 3e-08
 Identities = 65/242 (26%), Positives = 102/242 (42%), Gaps = 26/242 (10%)

Query: 97  VWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY 156
             G  G+ EY +V A + ++KI    + L      L   G+T Y  L +  + K G++V 
Sbjct: 118 TDG--GYAEYVVVPA-RYVVKIPE-GLDL-AEAAPLLCAGITTYRAL-KKANVKPGKWVA 171

Query: 157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR 216
           V  A G +G +  Q+AK  G  V+    S+EK++L K K G D   N  +   L  A+K 
Sbjct: 172 VVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDSDAL-EAVKE 228

Query: 217 CFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIR 276
                 D   + VG   L+  L  +R  G + + G+        P  +     LI K I 
Sbjct: 229 IA----DAIIDTVGPATLEPSLKALRRGGTLVLVGLP----GGGPIPLLPAFLLILKEIS 280

Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE--GLENAPAALVGLFTGRNVGKQ 334
           + G L G    L  + L+       EGK     +I E   L+    A   +  G+  G+ 
Sbjct: 281 IVGSLVGTRADL-EEALDFA----AEGK--IKPEILETIPLDEINEAYERMEKGKVRGRA 333

Query: 335 LV 336
           ++
Sbjct: 334 VI 335

Length = 339

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 53.1 bits (128), Expect = 7e-08
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TA   + E      GE V V+ ASG VG  + Q AK  G  V+  AG   K + ++   G
Sbjct: 165 TAE-NMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-ALG 221

Query: 198 FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI 253
             D    ++ P L  A K    + +D+  + VGG +   +L  +R  GR    G I
Sbjct: 222 -ADTVILRDAPLLADA-KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI 275

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG-MP--GVTAYAGLYEVCSPKKGEYVYVS 158
            + EY+LV   Q+       D  LS+    L  +P    TA+  L+     + G+ + + 
Sbjct: 96  SYAEYTLVPNEQV----YAIDSDLSW--AELAALPETYYTAWGSLFRSLGLQPGDTLLIR 149

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF 218
             + +VG    + AK  G  V  +  S E+  LLK + G D+     ++  +   L+   
Sbjct: 150 GGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVV--IDDGAIAEQLRA-A 205

Query: 219 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
           P G D   E VG   L   L ++R  G + + G++ 
Sbjct: 206 PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 21/186 (11%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           T Y  +      K GE V V    G +G    Q AK  G  V+     +EK++L K + G
Sbjct: 152 TPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELG 209

Query: 198 FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGMISQ 255
            D+  N  ++   D         G D+ F+ VG +    DA    ++  GRI V G    
Sbjct: 210 ADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKA-VKPGGRIVVVG---- 263

Query: 256 YNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI-----PAIREGKMVYVED 310
             L + +   +L  LI + +R+ G   G      P+ L+L+      P +    +   ++
Sbjct: 264 --LGRDKLTVDLSDLIARELRIIGSFGGT-PEDLPEVLDLIAKGKLDPQVETRPL---DE 317

Query: 311 IAEGLE 316
           I E LE
Sbjct: 318 IPEVLE 323

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 49/204 (24%), Positives = 69/204 (33%), Gaps = 19/204 (9%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L + GVTA   L     P  G  V V+ ASG VG+   Q A LAG +VV   GS  + + 
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           L+     +            +         +D+  ++VGG  L   L  +   G +   G
Sbjct: 173 LRELGAAEVV----VGGSELS------GAPVDLVVDSVGGPQLARALELLAPGGTVVSVG 222

Query: 252 MISQYNLEKPEGVHNLEQL--IGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVE 309
             S         V N       G   RL  F   D   L    L  ++  +  G++    
Sbjct: 223 SSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAAD-LARLLGLVAAGRLDPRI 276

Query: 310 DIAEGLENAPAALVGLFTGRNVGK 333
                      A   L   R  GK
Sbjct: 277 GWRGSWTEIDEAAEALLARRFRGK 300

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 49.5 bits (119), Expect = 9e-07
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           GVT Y  L +    K G++V +S A G +G L  Q+AK  G  V+      EK++L K +
Sbjct: 151 GVTVYKAL-KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208

Query: 196 FGFDDAFNYKEEPDLDAALKRC 217
            G D   ++K+  D++A  +  
Sbjct: 209 LGADAFVDFKKSDDVEAVKELT 230

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 49.6 bits (119), Expect = 9e-07
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 24/154 (15%)

Query: 87  HIQNYAKDDLVWGST---GWEEY------SLVTAPQLLIKIQHTDVPLSYYTGILGMPGV 137
            +  +   D V   T   G  EY       LV  P+ +   +   + L+Y         V
Sbjct: 75  GVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNY---------V 125

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TAY  L+       G+ V +  ASG VGQ + + A LAG  V G+A S+     L+    
Sbjct: 126 TAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALRELGA 184

Query: 198 FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG 231
                +Y+ +  L A L    P G+D+ F+ VGG
Sbjct: 185 T--PIDYRTKDWLPAMLT---PGGVDVVFDGVGG 213

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 26/182 (14%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGI---LGMPGVTAYAGLYEV-CSPKKGEYVYV 157
           G+ EY +V    L  KI     P S    +   L +  +TAY  L      P  GE V V
Sbjct: 117 GYAEYIVVPEKNL-FKI-----PDSISDELAASLPVAALTAYHALKTAGLGP--GETVVV 168

Query: 158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 217
             ASG  G    Q AK+ G  V+  +      D LK +FG D+  +Y E  +    + + 
Sbjct: 169 FGASGNTGIFAVQLAKMMGAEVIAVSRK----DWLK-EFGADEVVDYDEVEEKVKEITKM 223

Query: 218 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
                D+   ++G    D  L  +   GR+   G      L   E   +L  L  K+I +
Sbjct: 224 A----DVVINSLGSSFWDLSLSVLGRGGRLVTFGT-----LTGGEVKLDLSDLYSKQISI 274

Query: 278 EG 279
            G
Sbjct: 275 IG 276

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 12/85 (14%)

Query: 132 LGMPGVTAYAGLY----------EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVG 181
           L +  VTA   L+          +     KG+ V +   S +VG L  Q AKLAG  V+ 
Sbjct: 125 LPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVIT 184

Query: 182 SAGSKEKVDLLKNKFGFDDAFNYKE 206
           +A S +  DL+K   G D  F+Y +
Sbjct: 185 TA-SPKNFDLVK-SLGADAVFDYHD 207

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 71/286 (24%), Positives = 110/286 (38%), Gaps = 49/286 (17%)

Query: 73  VDSFHPGELKFWILHI------------QNYAKDDLVWGST---GWEEYSLVTAPQLLIK 117
           V  F PG+    +L+             + Y K+ L +G      + EY+ V    L +K
Sbjct: 73  VKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSL-VK 131

Query: 118 IQHTDVP---LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKL 174
           +   +V          + GM     Y GL      KKGE V V+ A G VG    Q AK 
Sbjct: 132 VP-PNVSDEGAVIVPCVTGM----VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKA 185

Query: 175 AGCYVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK 232
            G  V+    S+ K  ++  K+         + EE      +K+    G DI  E VG  
Sbjct: 186 LGAKVIAVTSSESKAKIVS-KYADYVIVGSKFSEE------VKKI--GGADIVIETVGTP 236

Query: 233 MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE--QLIGKRIRLEGFLAGDYYHLYP 290
            L+  L ++ + G+I   G +       P   ++L    +I K I + G ++        
Sbjct: 237 TLEESLRSLNMGGKIIQIGNV------DPSPTYSLRLGYIILKDIEIIGHISAT-----K 285

Query: 291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           + +E  +  + EGK+  V      L     AL  L     +GK LV
Sbjct: 286 RDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILV 331

Length = 334

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 131 ILGMPGVTAYAGLYEV----CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK 186
           ILG  G TA   ++ +     +P++G  V V+ A+G VG L        G  VV S G  
Sbjct: 123 ILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAVSILAKLGYEVVASTGKA 181

Query: 187 EKVDLLKNKFGFDDAFNYKEEPD--LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR 244
           +  D LK K G  +    +E  +  +    K+ +   +D     VGGK L  +L  ++  
Sbjct: 182 DAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGAVD----PVGGKTLAYLLSTLQYG 236

Query: 245 GRIAVCGM 252
           G +AV G+
Sbjct: 237 GSVAVSGL 244

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 59/251 (23%), Positives = 86/251 (34%), Gaps = 27/251 (10%)

Query: 87  HIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVP--LSYYTGILGMPGVTAYAGLY 144
            +  +   D V+      E  +V A  L+       +P  L      L     TA  G+ 
Sbjct: 38  GVTGFKPGDRVFCFGPHAERVVVPANLLVP------LPDGLPPERAALTALAATALNGV- 90

Query: 145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFN 203
               P+ GE V V    G VG L  Q AK AG   VVG       VD    +    +A  
Sbjct: 91  RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVG-------VDPDAARRELAEALG 142

Query: 204 YKEEPDLDAALKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPE 262
              +P           +G D+  E  G    L+  L  +R RGR+ + G      L   E
Sbjct: 143 -PADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGE 201

Query: 263 GVH-NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDI---AEGLENA 318
             H     +   ++   G           + LE  +  + EG+   +E +       E+A
Sbjct: 202 EFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGR---LEALITHRVPFEDA 258

Query: 319 PAALVGLFTGR 329
           P A   LF   
Sbjct: 259 PEAYRLLFEDP 269

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 7/147 (4%)

Query: 142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA 201
           G+ E    +  + V  +AA+ A+G+++ +  K  G  V+     KE+VDLLK K G +  
Sbjct: 134 GMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYV 192

Query: 202 FNYKEEPDLDAALKR-CFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEK 260
            N   +PD    LK         I+F+ VGG +   +LL M     + V G +S    + 
Sbjct: 193 LN-SSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSG---KL 248

Query: 261 PEGVHNLEQLIGKRIRLEGFLAGDYYH 287
            E + +   LI K   +EGF    +  
Sbjct: 249 DEPI-DPVDLIFKNKSIEGFWLTTWLQ 274

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 7/153 (4%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS 161
           G  EY++V A  L   +    +     + +LG  G TAY  L      + GE V V    
Sbjct: 141 GLAEYAVVPATAL-APLP-ESLDY-TESAVLGCAGFTAYGALKHAADVRPGETVAVIGV- 196

Query: 162 GAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ 220
           G VG    Q AK  G   + +     EK+   K + G     N  +E  + A  +    +
Sbjct: 197 GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKEDAVAAIREITGGR 255

Query: 221 GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGM 252
           G+D+  E +G  +     L  +R  GR  V G+
Sbjct: 256 GVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 44/195 (22%), Positives = 71/195 (36%), Gaps = 39/195 (20%)

Query: 97  VWG-STGW---EEYSLVTAPQLLIKIQHTDVPLSYY-TGILGMPGVTAYAGLYEVCSP-- 149
           +WG  T +    +++LV A QL+ K +H    LS+       + G TAY  L+       
Sbjct: 136 IWGYETNYGSFAQFALVQATQLMPKPKH----LSWEEAAAYMLVGATAYRMLF---GWNP 188

Query: 150 ---KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK------------- 193
              K G+ V +  ASG +G +  Q A+ AG   V    S+EK +  +             
Sbjct: 189 NTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDF 248

Query: 194 -NKFGFDDAFNYKEEPDLDAAL---KRCFP-----QGIDIYFENVGGKMLDAVLLNMRLR 244
            +     D  +         A    K  +      +  DI FE+ G       +      
Sbjct: 249 DHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRG 308

Query: 245 GRIAVCGMISQYNLE 259
           G + +C   + YN  
Sbjct: 309 GMVVICAGTTGYNHT 323

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 10/177 (5%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE 207
              G+ V V  A G +G L  Q+ K+ G   V+      EK+ + + + G DD  N KEE
Sbjct: 157 ITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE 214

Query: 208 PDLDAALKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN 266
            D++   +    +G D+  E  G    ++  L   R  G++ + G+   Y          
Sbjct: 215 -DVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGI--PYGDVTLSEEA- 270

Query: 267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE--GLENAPAA 321
            E+++ K + ++G                 +  +  GK+     I     LE+ PAA
Sbjct: 271 FEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAA 327

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 44.4 bits (105), Expect = 5e-05
 Identities = 58/270 (21%), Positives = 97/270 (35%), Gaps = 42/270 (15%)

Query: 97  VWGST----GWEEYSLVTAPQLLIKIQHTDVPLSYY-TGILGMPGVTAYAGL--YEVCSP 149
           +WG       + E++LV   QL+ K +H    L++      G+ G TAY  L  +   + 
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKH----LTWEEAACPGLTGATAYRQLVGWNPAAV 187

Query: 150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----------VDLLKNKFGFD 199
           K G+ V +  A+G +G    Q A+  G   V    S EK            + +N FG  
Sbjct: 188 KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDFGHW 247

Query: 200 DAF------NYKEEPDLDAALKRCFPQ-----GIDIYFENVGGKMLDAVLLNMRLRGRIA 248
                      KE         +   +       DI FE+ G       +   R  G + 
Sbjct: 248 GRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGGMVV 307

Query: 249 VCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV 308
           +CG  + YN +     ++   L  ++ R++G    +    Y +   LV     +G++   
Sbjct: 308 ICGGTTGYNHD-----YDNRYLWMRQKRIQGSHFANLREAY-EANRLVA----KGRIDPT 357

Query: 309 EDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
                 LE    A   +    + G   V V
Sbjct: 358 LSKTYPLEEIGQAHQDVHRNHHQGNVAVLV 387

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 20/148 (13%)

Query: 95  DLVWGSTGWE------EYSLVTAPQLLIKIQHTDVPLSYYTGI-LGMPGVTAYAGLYEVC 147
           D VWG+          EY +V   ++  K ++    LS+     L   G+TA++ L  V 
Sbjct: 99  DEVWGAVPPWSQGTHAEYVVVPENEVSKKPKN----LSHEEAASLPYAGLTAWSALVNVG 154

Query: 148 ----SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFN 203
                   G+ V +   SG VG    Q  K  G +V  +  S + + L+K   G DD  +
Sbjct: 155 GLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPLVK-SLGADDVID 212

Query: 204 YKEEPDLDAALKRCFPQGIDIYFENVGG 231
           Y  E   +   +R      D+  + VGG
Sbjct: 213 YNNEDFEEELTERG---KFDVILDTVGG 237

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 6/133 (4%)

Query: 99  GSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
           G + + EY++V    L +KI   D PL     +LG    T    +      + G+ V V 
Sbjct: 136 GCSTFAEYTVVHEISL-VKIDP-DAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVF 192

Query: 159 AASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 217
              G VG    Q AK AG   ++    + EK++L K KFG     N KE  D+  A+   
Sbjct: 193 GL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVEL 250

Query: 218 FPQGIDIYFENVG 230
              G D  FE VG
Sbjct: 251 TDGGADYAFECVG 263

Length = 366

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+T Y  L +    K  E     AA+G VG +  Q+AK  G  ++G+ GS +K    K  
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184

Query: 196 FGFDDAFNYKEE 207
            G     NY+EE
Sbjct: 185 -GAWQVINYREE 195

Length = 327

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 43.8 bits (104), Expect = 8e-05
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 26/191 (13%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKL--AGCYVVGSAGSKEKVDLLKNK 195
           T + G  E+   K G  V V   +G VG      A+L  A   +   + + E++DL K +
Sbjct: 155 TGFHGA-ELAGIKPGSTVAV-IGAGPVGLCAVAGARLLGAARIIAVDS-NPERLDLAK-E 210

Query: 196 FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM-RLRGRIAVCGMIS 254
            G  D  N K    ++  L+    +G+D   E VG +      + + R  G IA  G+  
Sbjct: 211 AGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGV-- 268

Query: 255 QYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM---VYV--- 308
                KP+ +  L +  GK +  +  L           +  ++  I EGK+     +   
Sbjct: 269 ---YGKPDPLPLLGEWFGKNLTFKTGLVPV-----RARMPELLDLIEEGKIDPSKLITHR 320

Query: 309 ---EDIAEGLE 316
              +DI +   
Sbjct: 321 FPLDDILKAYR 331

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
           LS     L  P   A   + E    + G+ V V    G +G L  Q AKL G  VV    
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGT 196

Query: 185 SKEKVDL-LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMR 242
            K++V L +  + G D   N  EE   +   +     G D+  E  G    L+  L  +R
Sbjct: 197 EKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLR 255

Query: 243 LRGRIAVCGM 252
             GRI   G+
Sbjct: 256 KGGRIVQVGI 265

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.95
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.8
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.59
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.58
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.34
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.3
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.59
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.48
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.46
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.25
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.24
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.13
PLN02494	477	adenosylhomocysteinase	98.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.11
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.08
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.05
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.99
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.99
PRK12742	237	oxidoreductase; Provisional	97.96
PRK08324	681	short chain dehydrogenase; Validated	97.95
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.94
PRK05693	274	short chain dehydrogenase; Provisional	97.94
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.93
PRK05993	277	short chain dehydrogenase; Provisional	97.93
PRK06182	273	short chain dehydrogenase; Validated	97.87
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.85
PRK08265	261	short chain dehydrogenase; Provisional	97.79
PLN03209	576	translocon at the inner envelope of chloroplast su	97.72
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.72
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.71
PRK05872	296	short chain dehydrogenase; Provisional	97.7
PRK08339	263	short chain dehydrogenase; Provisional	97.67
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.66
PRK07109	334	short chain dehydrogenase; Provisional	97.64
PRK06500	249	short chain dehydrogenase; Provisional	97.64
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.62
PRK06057	255	short chain dehydrogenase; Provisional	97.6
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.59
PRK06139	330	short chain dehydrogenase; Provisional	97.59
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.57
PRK07060	245	short chain dehydrogenase; Provisional	97.55
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.55
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.55
PRK12939	250	short chain dehydrogenase; Provisional	97.54
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.53
PRK08267	260	short chain dehydrogenase; Provisional	97.52
PRK07825	273	short chain dehydrogenase; Provisional	97.51
PRK07806	248	short chain dehydrogenase; Provisional	97.51
PRK06484	520	short chain dehydrogenase; Validated	97.51
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.5
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.5
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.5
PRK07576	264	short chain dehydrogenase; Provisional	97.49
PRK12829	264	short chain dehydrogenase; Provisional	97.48
PLN02780	320	ketoreductase/ oxidoreductase	97.46
PRK06196	315	oxidoreductase; Provisional	97.45
PRK08177	225	short chain dehydrogenase; Provisional	97.45
PRK08017	256	oxidoreductase; Provisional	97.44
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.42
PRK07062	265	short chain dehydrogenase; Provisional	97.41
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.4
PRK05866	293	short chain dehydrogenase; Provisional	97.39
PRK06949	258	short chain dehydrogenase; Provisional	97.39
PRK05867	253	short chain dehydrogenase; Provisional	97.38
PRK07814	263	short chain dehydrogenase; Provisional	97.38
PRK07063	260	short chain dehydrogenase; Provisional	97.37
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.37
PRK07831	262	short chain dehydrogenase; Provisional	97.37
PRK05854	313	short chain dehydrogenase; Provisional	97.36
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.36
PRK06180	277	short chain dehydrogenase; Provisional	97.36
PRK07832	272	short chain dehydrogenase; Provisional	97.34
PRK06841	255	short chain dehydrogenase; Provisional	97.34
PRK07478	254	short chain dehydrogenase; Provisional	97.32
PRK07890	258	short chain dehydrogenase; Provisional	97.3
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.28
PRK09291	257	short chain dehydrogenase; Provisional	97.28
PRK12828	239	short chain dehydrogenase; Provisional	97.27
PRK09186	256	flagellin modification protein A; Provisional	97.27
PRK07326	237	short chain dehydrogenase; Provisional	97.27
PRK05884	223	short chain dehydrogenase; Provisional	97.26
PRK05717	255	oxidoreductase; Validated	97.26
PRK06194	287	hypothetical protein; Provisional	97.26
PRK05876	275	short chain dehydrogenase; Provisional	97.26
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.26
PRK06953	222	short chain dehydrogenase; Provisional	97.25
PRK07453	322	protochlorophyllide oxidoreductase; Validated	97.25
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.25
PRK06128	300	oxidoreductase; Provisional	97.25
PRK07024	257	short chain dehydrogenase; Provisional	97.23
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.22
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.21
PRK07677	252	short chain dehydrogenase; Provisional	97.2
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.2
PRK10538	248	malonic semialdehyde reductase; Provisional	97.2
PRK06197	306	short chain dehydrogenase; Provisional	97.19
PRK08703	239	short chain dehydrogenase; Provisional	97.19
PRK09242	257	tropinone reductase; Provisional	97.18
PLN02253	280	xanthoxin dehydrogenase	97.18
PRK06484	520	short chain dehydrogenase; Validated	97.18
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.15
PRK07067	257	sorbitol dehydrogenase; Provisional	97.14
PRK07904	253	short chain dehydrogenase; Provisional	97.14
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.14
PRK06482	276	short chain dehydrogenase; Provisional	97.13
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.13
PRK12367	245	short chain dehydrogenase; Provisional	97.13
PRK06138	252	short chain dehydrogenase; Provisional	97.13
PRK08589	272	short chain dehydrogenase; Validated	97.12
PRK09072	263	short chain dehydrogenase; Provisional	97.12
PRK08643	256	acetoin reductase; Validated	97.11
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.11
PRK06181	263	short chain dehydrogenase; Provisional	97.11
PRK06914	280	short chain dehydrogenase; Provisional	97.11
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.1
PRK07774	250	short chain dehydrogenase; Provisional	97.1
PRK08251	248	short chain dehydrogenase; Provisional	97.1
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.1
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.09
PRK06483	236	dihydromonapterin reductase; Provisional	97.08
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.08
PRK05875	276	short chain dehydrogenase; Provisional	97.08
PRK06172	253	short chain dehydrogenase; Provisional	97.07
PRK08263	275	short chain dehydrogenase; Provisional	97.07
PRK08862	227	short chain dehydrogenase; Provisional	97.07
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.06
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.06
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.06
PRK07035	252	short chain dehydrogenase; Provisional	97.05
PRK06720	169	hypothetical protein; Provisional	97.04
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
CHL00194	317	ycf39 Ycf39; Provisional	97.03
PRK06125	259	short chain dehydrogenase; Provisional	97.02
PRK06179	270	short chain dehydrogenase; Provisional	97.01
PRK07454	241	short chain dehydrogenase; Provisional	97.01
PRK06198	260	short chain dehydrogenase; Provisional	97.01
PRK07074	257	short chain dehydrogenase; Provisional	97.01
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.01
KOG0725	270	consensus Reductases with broad range of substrate	97.0
PRK07985	294	oxidoreductase; Provisional	97.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.0
PRK12937	245	short chain dehydrogenase; Provisional	96.99
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.99
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.98
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.98
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.97
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.97
PRK08628	258	short chain dehydrogenase; Provisional	96.97
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.97
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.96
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.96
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.92
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	96.92
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.91
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.9
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.89
PRK08226	263	short chain dehydrogenase; Provisional	96.88
PRK07791	286	short chain dehydrogenase; Provisional	96.86
PRK12747	252	short chain dehydrogenase; Provisional	96.86
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.86
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.85
PRK07856	252	short chain dehydrogenase; Provisional	96.84
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.83
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.83
PRK06114	254	short chain dehydrogenase; Provisional	96.82
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.82
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	96.81
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.8
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.79
PRK06398	258	aldose dehydrogenase; Validated	96.78
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.78
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.77
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.77
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.77
PRK06101	240	short chain dehydrogenase; Provisional	96.76
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.75
PRK04148	134	hypothetical protein; Provisional	96.75
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.75
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.75
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.73
PRK05650	270	short chain dehydrogenase; Provisional	96.73
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.72
PRK06940	275	short chain dehydrogenase; Provisional	96.71
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.69
PRK08303	305	short chain dehydrogenase; Provisional	96.68
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.68
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.67
PRK07577	234	short chain dehydrogenase; Provisional	96.66
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.66
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.65
PRK07775	274	short chain dehydrogenase; Provisional	96.65
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.63
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.61
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.61
PRK09135	249	pteridine reductase; Provisional	96.61
PRK07069	251	short chain dehydrogenase; Validated	96.61
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.6
PRK12743	256	oxidoreductase; Provisional	96.6
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.6
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.6
PRK08278	273	short chain dehydrogenase; Provisional	96.59
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.59
PRK08264	238	short chain dehydrogenase; Validated	96.59
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.56
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.56
COG2910	211	Putative NADH-flavin reductase [General function p	96.54
PRK06523	260	short chain dehydrogenase; Provisional	96.54
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.52
PRK07102	243	short chain dehydrogenase; Provisional	96.52
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	96.5
PRK08219	227	short chain dehydrogenase; Provisional	96.5
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.49
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	96.49
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.49
COG4122	219	Predicted O-methyltransferase [General function pr	96.48
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.47
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.47
PRK05599	246	hypothetical protein; Provisional	96.47
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.46
PRK09134	258	short chain dehydrogenase; Provisional	96.46
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.46
PRK12746	254	short chain dehydrogenase; Provisional	96.46
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.46
PLN00015	308	protochlorophyllide reductase	96.46
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.46
TIGR00438	188	rrmJ cell division protein FtsJ.	96.45
KOG1208	314	consensus Dehydrogenases with different specificit	96.44
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.41
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.4
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.4
PRK07201	657	short chain dehydrogenase; Provisional	96.39
PRK05855	582	short chain dehydrogenase; Validated	96.38
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	96.35
PLN02476	278	O-methyltransferase	96.33
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.33
PRK06701	290	short chain dehydrogenase; Provisional	96.32
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.3
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	96.29
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.28
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.28
PRK08309	177	short chain dehydrogenase; Provisional	96.28
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.27
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.26
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	96.23
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.23
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.22
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	96.18
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.17
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.17
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.15
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	96.15
PRK00811	283	spermidine synthase; Provisional	96.13
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.13
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.12
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.11
PLN00016	378	RNA-binding protein; Provisional	96.1
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.09
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.09
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.09
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.08
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.03
PRK11207	197	tellurite resistance protein TehB; Provisional	96.03
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.02
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.02
PLN02366	308	spermidine synthase	96.02
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.01
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.0
PRK07041	230	short chain dehydrogenase; Provisional	96.0
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.0
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.99
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.98
PLN03075	296	nicotianamine synthase; Provisional	95.96
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.95
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	95.94
PRK07402	196	precorrin-6B methylase; Provisional	95.94
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.94
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.93
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.93
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.93
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	95.91
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.91
COG3963	194	Phospholipid N-methyltransferase [Lipid metabolism	95.91
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.89
PRK12744	257	short chain dehydrogenase; Provisional	95.89
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.88
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.87
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	95.85
KOG1252	362	consensus Cystathionine beta-synthase and related	95.84
PRK07578	199	short chain dehydrogenase; Provisional	95.84
PLN02244	340	tocopherol O-methyltransferase	95.83
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.81
PRK12824	245	acetoacetyl-CoA reductase; Provisional	95.81
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.79
PRK12827	249	short chain dehydrogenase; Provisional	95.78
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.77
PRK07023	243	short chain dehydrogenase; Provisional	95.77
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.77
PLN00203	519	glutamyl-tRNA reductase	95.76
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.76
PLN02653	340	GDP-mannose 4,6-dehydratase	95.75
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.74
PRK06123	248	short chain dehydrogenase; Provisional	95.72
PRK14982	340	acyl-ACP reductase; Provisional	95.72
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.72
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	95.71
PRK01581	374	speE spermidine synthase; Validated	95.69
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.67
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.67
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.66
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	95.65
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.59
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.55
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	95.55
PRK04457	262	spermidine synthase; Provisional	95.54
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.53
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.53
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	95.51
PRK08655	437	prephenate dehydrogenase; Provisional	95.49
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.44
PRK08618	325	ornithine cyclodeaminase; Validated	95.41
PRK14967	223	putative methyltransferase; Provisional	95.38
PLN02214	342	cinnamoyl-CoA reductase	95.37
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	95.35
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.34
PLN02686	367	cinnamoyl-CoA reductase	95.32
COG1028	251	FabG Dehydrogenases with different specificities (	95.32
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.32
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.28
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	95.27
PRK06924	251	short chain dehydrogenase; Provisional	95.25
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.25
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	95.24
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.16
PRK08317	241	hypothetical protein; Provisional	95.16
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.15
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.13
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	95.11
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.11
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	95.11
PLN02240	352	UDP-glucose 4-epimerase	95.11
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.11
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.1
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.09
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.06
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	94.99
PRK07574	385	formate dehydrogenase; Provisional	94.98
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.95
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	94.91
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	94.89
PLN02427	386	UDP-apiose/xylose synthase	94.88
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	94.88
PRK13255	218	thiopurine S-methyltransferase; Reviewed	94.87
PLN03139	386	formate dehydrogenase; Provisional	94.85
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	94.84
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.84
PRK06849	389	hypothetical protein; Provisional	94.84
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.82
PLN00198	338	anthocyanidin reductase; Provisional	94.8
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	94.8
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.78
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	94.77
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	94.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.74
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.73
PRK13243	333	glyoxylate reductase; Reviewed	94.7
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.7
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	94.69
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.69
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.65

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6e-55  Score=376.65  Aligned_cols=302  Identities=25%  Similarity=0.292  Sum_probs=269.3

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      +++|||+++.++  ++|    +++.+  +|.| ++++ +||+|+|+|+|+|++|++.+.|.++.. .+|++||||.+|+ 
T Consensus         1 ~~~mkA~~~~~~--~~p----l~i~e--~~~p-~p~~-~eVlI~v~~~GVChsDlH~~~G~~~~~-~~P~ipGHEivG~V   69 (339)
T COG1064           1 MMTMKAAVLKKF--GQP----LEIEE--VPVP-EPGP-GEVLIKVEACGVCHTDLHVAKGDWPVP-KLPLIPGHEIVGTV   69 (339)
T ss_pred             CcceEEEEEccC--CCC----ceEEe--ccCC-CCCC-CeEEEEEEEEeecchhhhhhcCCCCCC-CCCccCCcceEEEE
Confidence            368999999998  777    35554  5555 4588 999999999999999999999988753 3899999999999 


Q ss_pred             ----eCCCCCCCCCEEEe-c------------------------------cceeeEEEecCccceeeccCCCCCcccccc
Q 037444           86 ----LHIQNYAKDDLVWG-S------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTG  130 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~-~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa  130 (339)
                          ++|++|++||||.. +                              |+|+||+++++++ ++++ |+++++. ++|
T Consensus        70 ~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~-~~~i-P~~~d~~-~aA  146 (339)
T COG1064          70 VEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARY-VVKI-PEGLDLA-EAA  146 (339)
T ss_pred             EEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHH-eEEC-CCCCChh-hhh
Confidence                89999999999976 2                              7999999999999 9999 9996665 799


Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      .+.+++.|+|++| +..+++||++|+|+|+ |++|++++|+|+++|++|+++++++++.+.++ ++|++++++.++. +.
T Consensus       147 pllCaGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-~~  222 (339)
T COG1064         147 PLLCAGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DA  222 (339)
T ss_pred             hhhcCeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-hh
Confidence            9999999999999 4599999999999997 79999999999999999999999999999999 9999999998765 77


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      .+.+++.    +|++||+++..+++.+++.|+++|+++.+|.+...    .....+.+.+..+++++.|+...+     +
T Consensus       223 ~~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~----~~~~~~~~~li~~~~~i~GS~~g~-----~  289 (339)
T COG1064         223 LEAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGG----PIPLLPAFLLILKEISIVGSLVGT-----R  289 (339)
T ss_pred             hHHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCc----ccCCCCHHHhhhcCeEEEEEecCC-----H
Confidence            7777764    99999999977999999999999999999986411    223456788899999999999988     8


Q ss_pred             HHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .++++++++..+|++++.+.+.++++++++|++.|.+++..|++|+++.
T Consensus       290 ~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         290 ADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            8999999999999999999777999999999999999999999999863

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.6e-51  Score=364.33  Aligned_cols=312  Identities=29%  Similarity=0.407  Sum_probs=268.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  ++|+  .  ++..+.|.|. +++ +||||||+++|+|+.|.....|......++|+++|.|++|+    
T Consensus         1 mka~~~~~~--g~~~--~--l~~~e~~~P~-p~~-geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~av   72 (326)
T COG0604           1 MKAVVVEEF--GGPE--V--LKVVEVPEPE-PGP-GEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAV   72 (326)
T ss_pred             CeEEEEecc--CCCc--e--eEEEecCCCC-CCC-CeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEe
Confidence            689999998  8885  2  5555677674 488 99999999999999999999997444556899999999999    


Q ss_pred             -eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           86 -LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                       ++|+.|++||||+++      |+|+||+.++++. ++++ |++++.. ++|++++.++|||++|.+..++++|++|||+
T Consensus        73 G~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~-~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~  149 (326)
T COG0604          73 GSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADW-LVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLVH  149 (326)
T ss_pred             CCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence             789999999999987      6899999999999 9999 9996555 7999999999999999999999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHH
Q 037444          159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAV  237 (339)
Q Consensus       159 ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~  237 (339)
                      ||+|++|.+++|+||++|+++++++.++++.+.++ ++|++++++|+++ ++.+++++++.+ ++|+|||++|++.+..+
T Consensus       150 gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~  227 (326)
T COG0604         150 GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAAS  227 (326)
T ss_pred             cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHH
Confidence            99999999999999999988888887888888888 9999999999997 899999999998 99999999999999999


Q ss_pred             HHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCcc
Q 037444          238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGLE  316 (339)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~  316 (339)
                      +++|+++|+++.+|..++    ......+...++.+.+...+...... ++...+.++++.+++++|.+++.++.+|+++
T Consensus       228 l~~l~~~G~lv~ig~~~g----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~  303 (326)
T COG0604         228 LAALAPGGRLVSIGALSG----GPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLA  303 (326)
T ss_pred             HHHhccCCEEEEEecCCC----CCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechh
Confidence            999999999999998763    11223346677778888777766532 2445677888999999999999999999999


Q ss_pred             cHHHHHHHhHc-CCccceEEEEe
Q 037444          317 NAPAALVGLFT-GRNVGKQLVAV  338 (339)
Q Consensus       317 ~~~~a~~~~~~-~~~~gkvvv~~  338 (339)
                      +..++...... ++..||+|+++
T Consensus       304 e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         304 EAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             hhHHHHHHHHcccCCcceEEEeC
Confidence            96555554444 58899999974

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.9e-49  Score=317.48  Aligned_cols=314  Identities=20%  Similarity=0.249  Sum_probs=273.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      -|+..|.+++++.  |++  +++++++.+.  | ++.| +|++||..|+|+|..|.....|.+. ..+.|++||.|.+|+
T Consensus         5 ~p~~~k~i~v~e~--Ggy--dvlk~ed~pv--~-~pap-gel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGv   75 (336)
T KOG1197|consen    5 SPPLLKCIVVTEF--GGY--DVLKLEDRPV--P-PPAP-GELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGV   75 (336)
T ss_pred             CCchheEEEEecc--CCc--ceEEEeeecC--C-CCCC-CceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceE
Confidence            4688999999999  888  5666665544  5 5578 9999999999999999998888774 356799999999999


Q ss_pred             -----eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           86 -----LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                           ++++++++||||..+   |.|+|+..+|... ++++ |+.+++. ++|++...++|||..+++..++++|++||+
T Consensus        76 VvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~k-v~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlv  152 (336)
T KOG1197|consen   76 VVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVK-VFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLV  152 (336)
T ss_pred             EEEecCCccccccccEEEEeccchhhheecccccee-eccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence                 899999999999987   7899999999998 9999 9997766 788999999999999999999999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHH
Q 037444          158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDA  236 (339)
Q Consensus       158 ~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~  236 (339)
                      +.|+|++|++++|++|..|+++|++.++.++++.++ +.|+++.++++.+ |+.+++..++.| |+|+++|.+|.+++..
T Consensus       153 haAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~  230 (336)
T KOG1197|consen  153 HAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAK  230 (336)
T ss_pred             EeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHH
Confidence            999999999999999999999999999999999999 9999999999998 999999999988 9999999999999999


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc---cchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ++.+|++.|.+|.+|..++..     .+.++..+..+++.+....+..|   +........++..++-+|.+++.+..+|
T Consensus       231 sl~~Lk~~G~mVSfG~asgl~-----~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~y  305 (336)
T KOG1197|consen  231 SLAALKPMGKMVSFGNASGLI-----DPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVY  305 (336)
T ss_pred             HHHHhccCceEEEeccccCCC-----CCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeec
Confidence            999999999999999877642     22334445555555544333333   2223345667888889999999999999


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ||+++.+|+..++++++.||+++.+
T Consensus       306 pls~vadA~~diesrktvGkvlLlp  330 (336)
T KOG1197|consen  306 PLSKVADAHADIESRKTVGKVLLLP  330 (336)
T ss_pred             chHHHHHHHHHHHhhhccceEEEeC
Confidence            9999999999999999999999865

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.9e-47  Score=316.94  Aligned_cols=322  Identities=47%  Similarity=0.804  Sum_probs=288.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      .+.+++...+.|.|..+.|++++.++|.|   ++ +|||+|+.|.+++|..+..+....  .+.+|+-+|..++|-    
T Consensus         9 ~~~~~la~rP~g~p~~d~F~lee~~vp~p---~~-GqvLl~~~ylS~DPymRgrm~d~~--SY~~P~~lG~~~~gg~V~~   82 (340)
T COG2130           9 NRRIVLASRPEGAPVPDDFRLEEVDVPEP---GE-GQVLLRTLYLSLDPYMRGRMSDAP--SYAPPVELGEVMVGGTVAK   82 (340)
T ss_pred             hheeeeccCCCCCCCCCCceeEeccCCCC---Cc-CceEEEEEEeccCHHHeecccCCc--ccCCCcCCCceeECCeeEE
Confidence            48899999999999989999988777643   88 999999999999998776666543  467788888887665    


Q ss_pred             ---eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCc
Q 037444           86 ---LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG  162 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g  162 (339)
                         ++...|++||.|.+..+|++|..++.+. +.|++|...++++....|.+++.|||.+|.+.+..++|++|+|.+|+|
T Consensus        83 Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~-l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaG  161 (340)
T COG2130          83 VVASNHPGFQPGDIVVGVSGWQEYAISDGEG-LRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAG  161 (340)
T ss_pred             EEecCCCCCCCCCEEEecccceEEEeechhh-ceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEeccc
Confidence               6788899999999999999999999998 999976667777778899999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhc
Q 037444          163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR  242 (339)
Q Consensus       163 ~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~  242 (339)
                      ++|..+.|+||..|++|+.++.++++.+++++.+|.|.++||+.+ ++.+.+.+.++.|+|+.||++|++.+...+..|.
T Consensus       162 aVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln  240 (340)
T COG2130         162 AVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLN  240 (340)
T ss_pred             ccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhc
Confidence            999999999999999999999999999999966999999999998 9999999999999999999999999999999999


Q ss_pred             cCCEEEEEecccccCCCC-CccccchHHHHhccccccceec-ccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHH
Q 037444          243 LRGRIAVCGMISQYNLEK-PEGVHNLEQLIGKRIRLEGFLA-GDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPA  320 (339)
Q Consensus       243 ~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~  320 (339)
                      .++|++.||..+.+|... +..+.....++.+.+++.|+.. .++.....+.++++..|+.+|+|+...+.+-+||++|+
T Consensus       241 ~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~  320 (340)
T COG2130         241 LFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPE  320 (340)
T ss_pred             cccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHH
Confidence            999999999999987653 3344556777888999999998 55455666899999999999999999887779999999


Q ss_pred             HHHHhHcCCccceEEEEeC
Q 037444          321 ALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       321 a~~~~~~~~~~gkvvv~~~  339 (339)
                      ||..+.+|+..||+|+++.
T Consensus       321 Af~gLl~G~N~GK~vvKv~  339 (340)
T COG2130         321 AFIGLLSGKNFGKLVVKVA  339 (340)
T ss_pred             HHHHHhcCCccceEEEEec
Confidence            9999999999999999874

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.3e-48  Score=322.08  Aligned_cols=311  Identities=19%  Similarity=0.176  Sum_probs=269.3

Q ss_pred             CcccccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCC
Q 037444            1 MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGE   80 (339)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~   80 (339)
                      |.+...|.++++|.+...  .++.    ..+..++|.| ++++ +||+|+|++||||++|++.+.|.|+. ..+|.++||
T Consensus         1 ~~~~~~p~k~~g~~~~~~--~G~l----~p~~~~~~~~-~~g~-~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GH   71 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDP--SGVL----SPEVFSFPVR-EPGE-NDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGH   71 (360)
T ss_pred             CCcccCchhhEEEEEECC--CCCC----CcceeEcCCC-CCCC-CcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCc
Confidence            455556788999999887  5541    2333345555 5588 99999999999999999999999986 789999999


Q ss_pred             eeEEe-----eCCCCCCCCCEEEe-c-------------------------------------cceeeEEEecCccceee
Q 037444           81 LKFWI-----LHIQNYAKDDLVWG-S-------------------------------------TGWEEYSLVTAPQLLIK  117 (339)
Q Consensus        81 e~~G~-----~~v~~~~~Gd~V~~-~-------------------------------------g~~~~~~~v~~~~~~~~  117 (339)
                      |.+|+     ++|++|++||||=. +                                     |+|++|+++++.+ +++
T Consensus        72 EiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~-a~k  150 (360)
T KOG0023|consen   72 EIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVF-AIK  150 (360)
T ss_pred             eeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeee-EEE
Confidence            99999     89999999999932 0                                     5799999999999 999


Q ss_pred             ccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 037444          118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG  197 (339)
Q Consensus       118 i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g  197 (339)
                      | |+++|+. .||.|.+++.|+|.+| ...++.||+++.|.|+ |++|.+++|+||++|.+|++++++..+.+.+-+.||
T Consensus       151 I-P~~~pl~-~aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG  226 (360)
T KOG0023|consen  151 I-PENLPLA-SAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG  226 (360)
T ss_pred             C-CCCCChh-hccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence            9 9998887 7999999999999999 5578899999999998 559999999999999999999999855555544899


Q ss_pred             CCeeeeCC-ChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccc
Q 037444          198 FDDAFNYK-EEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIR  276 (339)
Q Consensus       198 ~~~v~~~~-~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  276 (339)
                      ++..++.. ++ ++.+++...+++++|-|.+. ....++.++.+++.+|++|++|.+..      ....+.+.+..+.++
T Consensus       227 Ad~fv~~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~  298 (360)
T KOG0023|consen  227 ADVFVDSTEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKS  298 (360)
T ss_pred             cceeEEecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEE
Confidence            99888877 55 99999999988888888877 44688999999999999999998754      245677888999999


Q ss_pred             ccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       277 ~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +.|+.++.     +.+.++++++...+.+++.+.. .+++++++||+++.++..++|.|++++
T Consensus       299 I~GS~vG~-----~ket~E~Ldf~a~~~ik~~IE~-v~~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  299 IKGSIVGS-----RKETQEALDFVARGLIKSPIEL-VKLSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             EEeecccc-----HHHHHHHHHHHHcCCCcCceEE-EehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            99999999     8889999999999999998877 699999999999999999999999863

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-47  Score=341.10  Aligned_cols=330  Identities=64%  Similarity=1.099  Sum_probs=270.2

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEee-cccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCC--eeE
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSG-SIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGE--LKF   83 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~-~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~--e~~   83 (339)
                      ..++|.+++.++++|.|.+++|++... +.+.|.++++ +||||||.++++||.|+..+.+... ...+|.++|+  +++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~-gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~   83 (348)
T PLN03154          6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGS-GAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGF   83 (348)
T ss_pred             cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCC-CeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEee
Confidence            367899999999999999899998875 3555545577 9999999999999999876544222 2345789998  677


Q ss_pred             Ee-----eCCCCCCCCCEEEeccceeeEEEecCcc-ce--eeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEE
Q 037444           84 WI-----LHIQNYAKDDLVWGSTGWEEYSLVTAPQ-LL--IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYV  155 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~--~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~v  155 (339)
                      |+     +++++|++||+|+++++|+||..++++. .+  +++ |++++.+.++++++++++|||++|.+.+++++|++|
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~V  162 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSV  162 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEE
Confidence            77     7888899999999999999999998742 14  445 788655434778999999999999888899999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHH
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLD  235 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~  235 (339)
                      ||+|++|++|++++|+|+.+|++|+++++++++.+.+++++|+++++++++..++.+.+++.+++++|++|||+|+..+.
T Consensus       163 lV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~  242 (348)
T PLN03154        163 FVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLD  242 (348)
T ss_pred             EEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHH
Confidence            99999999999999999999999999999999999886469999999987422677888887766899999999998999


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      .++++++++|+++.+|...+..............++.+++++.|+....+.....+.++++++++++|++++.+..+|+|
T Consensus       243 ~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L  322 (348)
T PLN03154        243 AALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGL  322 (348)
T ss_pred             HHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCH
Confidence            99999999999999997543211100111244567788999888876544333456788999999999999888888999


Q ss_pred             ccHHHHHHHhHcCCccceEEEEeC
Q 037444          316 ENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +++++|++.+.+++..||+|++++
T Consensus       323 ~~~~~A~~~l~~g~~~GKvVl~~~  346 (348)
T PLN03154        323 ESAPAALVGLFSGKNVGKQVIRVA  346 (348)
T ss_pred             HHHHHHHHHHHcCCCCceEEEEec
Confidence            999999999999999999999873

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.8e-45  Score=331.31  Aligned_cols=326  Identities=69%  Similarity=1.145  Sum_probs=261.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeeccc--ccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE---
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIK--LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW---   84 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p--~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G---   84 (339)
                      .|.+++.....+.|.+++|++++..+|  .| .+++ +||||||++++|||.|++.+.|.......+|+++|+++.|   
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~p~~-~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~   80 (338)
T cd08295           3 NKQVILKAYVTGFPKESDLELRTTKLTLKVP-PGGS-GDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGV   80 (338)
T ss_pred             ceEEEEecCCCCCCCccceEEEEecCCcCCC-CCCC-CeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEE
Confidence            355666666567777788999887663  34 3588 9999999999999999998888543213457788865433   


Q ss_pred             --e--eCCCCCCCCCEEEeccceeeEEEecC-ccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444           85 --I--LHIQNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus        85 --~--~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                        +  +++++|++||+|+++|+|+||+++++ .. +++++|++++++++++++++++.|||+++.+.+++++|++|||+|
T Consensus        81 ~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~-~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~G  159 (338)
T cd08295          81 AKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQD-LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSA  159 (338)
T ss_pred             EEEEecCCCCCCCCCEEEecCCceeEEEecchhc-eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEec
Confidence              2  67788999999999999999999999 67 999833566555458889999999999998888999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHH
Q 037444          160 ASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL  239 (339)
Q Consensus       160 a~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~  239 (339)
                      ++|++|++++|+|+.+|++|+++++++++.+.+++.+|+++++++++..++.+.+++.+++++|++||++|+..+..+++
T Consensus       160 a~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~  239 (338)
T cd08295         160 ASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLL  239 (338)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHH
Confidence            99999999999999999999999999999999983399999999754227778888877568999999999989999999


Q ss_pred             hhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHH
Q 037444          240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAP  319 (339)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~  319 (339)
                      +++++|+++.+|..+...............++.+++++.++.....+....+.++++++++.+|.+++.+...|++++++
T Consensus       240 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~  319 (338)
T cd08295         240 NMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAP  319 (338)
T ss_pred             HhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHH
Confidence            99999999999875432110000112335566777887776654443334566889999999999998777779999999


Q ss_pred             HHHHHhHcCCccceEEEEe
Q 037444          320 AALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       320 ~a~~~~~~~~~~gkvvv~~  338 (339)
                      +|++.+.+++..||+|+++
T Consensus       320 ~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         320 EAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHhcCCCCceEEEEC
Confidence            9999999999999999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.4e-44  Score=300.54  Aligned_cols=303  Identities=20%  Similarity=0.177  Sum_probs=254.4

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~   85 (339)
                      .+|+|+++.+.       .++.++  +.|.|.+++| +||+|+++++|||.+|++.+......  ..+.|+++|||.+|+
T Consensus         3 ~~~~A~vl~g~-------~di~i~--~~p~p~i~~p-~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGi   72 (354)
T KOG0024|consen    3 ADNLALVLRGK-------GDIRIE--QRPIPTITDP-DEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGI   72 (354)
T ss_pred             cccceeEEEcc-------CceeEe--eCCCCCCCCC-CEEEEEeeeEEecCccchhhccCCcCccccccccccccccccc
Confidence            46799999885       333554  6787866688 99999999999999999988765432  235699999999999


Q ss_pred             -----eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 -----LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                           +.|+.+++||||..-                               |++++|.+.+++. ++|+ |++  ++++.
T Consensus        73 V~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~df-c~KL-Pd~--vs~ee  148 (354)
T KOG0024|consen   73 VEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADF-CYKL-PDN--VSFEE  148 (354)
T ss_pred             hhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHh-eeeC-CCC--Cchhh
Confidence                 889999999999742                               7889999999999 9999 999  55578


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCCh-
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE-  207 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~-  207 (339)
                      ++|..+++++|||. +++++++|++|||+|| |++|+++...||++|| +|+++.-.+.+++.++ ++|++.+.+.... 
T Consensus       149 GAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~  225 (354)
T KOG0024|consen  149 GALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKS  225 (354)
T ss_pred             cccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccc
Confidence            89999999999999 7799999999999997 9999999999999999 8999999999999999 8999877665542 


Q ss_pred             --hhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          208 --PDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       208 --~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                        +++.+.++...+. .+|++|||+|. ..++.++..++.+|++++.|+-..      ..+++......|++.+.|+..+
T Consensus       226 ~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~kE~~~~g~fry  299 (354)
T KOG0024|consen  226 SPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVALKEVDLRGSFRY  299 (354)
T ss_pred             cHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChhhhhhheeeeeeeeee
Confidence              2455666666665 79999999996 589999999999999988887332      2345667788899999998776


Q ss_pred             cccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccc-eEEEEe
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVG-KQLVAV  338 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~g-kvvv~~  338 (339)
                      .     +..++.+++++++|++...  ++..|+++++.+||+.+..+...+ |+++..
T Consensus       300 ~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~  352 (354)
T KOG0024|consen  300 C-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG  352 (354)
T ss_pred             c-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence            6     6679999999999998754  566789999999999999877432 887764

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=1.1e-44  Score=306.25  Aligned_cols=305  Identities=22%  Similarity=0.205  Sum_probs=264.1

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      |++||++..+.  ++|    |++++.+++   +|++ +||+||+.++|+|++|....+|..+  ..+|.++|||.+|+  
T Consensus         1 mk~~aAV~~~~--~~P----l~i~ei~l~---~P~~-gEVlVri~AtGVCHTD~~~~~G~~p--~~~P~vLGHEgAGiVe   68 (366)
T COG1062           1 MKTRAAVAREA--GKP----LEIEEVDLD---PPRA-GEVLVRITATGVCHTDAHTLSGDDP--EGFPAVLGHEGAGIVE   68 (366)
T ss_pred             CCceEeeeecC--CCC----eEEEEEecC---CCCC-CeEEEEEEEeeccccchhhhcCCCC--CCCceecccccccEEE
Confidence            46799999998  889    577776665   5587 9999999999999999999999776  34899999999999  


Q ss_pred             ---eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecC
Q 037444           86 ---LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTA  111 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  111 (339)
                         ++|+++++||.|+..                                                   ++|++|.++++
T Consensus        69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~  148 (366)
T COG1062          69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE  148 (366)
T ss_pred             EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence               899999999999753                                                   27899999999


Q ss_pred             ccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 037444          112 PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD  190 (339)
Q Consensus       112 ~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~  190 (339)
                      .. ++|+ ++..|+. .++.+.+...|.+-+..+.+++++|++|.|.| .|++|++++|-|+..|| ++|++..++++++
T Consensus       149 ~s-~vki-~~~~p~~-~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~  224 (366)
T COG1062         149 IS-LVKI-DPDAPLE-KACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLE  224 (366)
T ss_pred             cc-eEEC-CCCCCcc-ceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHH
Confidence            99 9999 7776666 68889999999999998999999999999999 59999999999999999 8999999999999


Q ss_pred             HHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHH
Q 037444          191 LLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQ  269 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  269 (339)
                      +++ +||+++++|.++..++.+.+.+++++|+|++|||+|+ ..+++++.++.++|+.+.+|..+..    ...+...+.
T Consensus       225 ~A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~  299 (366)
T COG1062         225 LAK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQ  299 (366)
T ss_pred             HHH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHH
Confidence            999 9999999998875359999999999999999999997 6999999999999999999985542    223345566


Q ss_pred             HHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          270 LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +... .+|.|+.+.+..-  +.++..+++++.+|+++..  ++..++|||+++||+.+.+++.. |-|+.
T Consensus       300 lv~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         300 LVTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             eecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            6665 8888888876522  5678999999999999865  55568999999999999999887 66654

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.2e-43  Score=318.60  Aligned_cols=318  Identities=42%  Similarity=0.696  Sum_probs=258.3

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--e
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--L   86 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--~   86 (339)
                      +||++++.+...|.+.++.+++++  .|.| .+++ +||+|||++++||+.|++....    ..++|.++|+|++|+  +
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~--~~~p-~~~~-~evlVkv~a~~in~~~~~~~~~----~~~~p~v~G~e~~G~V~~   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVE--EELP-PLKD-GEVLCEALFLSVDPYMRPYSKR----LNEGDTMIGTQVAKVIES   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEe--cCCC-CCCC-CcEEEEEEEEecCHHHhccccc----CCCCCcEecceEEEEEec
Confidence            589999998423444435666655  5556 3488 9999999999999988652211    124578999999999  7


Q ss_pred             CCCCCCCCCEEEeccceeeEEEecCc---cceeeccCCCCCc--c--ccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444           87 HIQNYAKDDLVWGSTGWEEYSLVTAP---QLLIKIQHTDVPL--S--YYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~g~~~~~~~v~~~---~~~~~i~p~~~~~--~--~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      .+++|++||+|+++++|++|+.++++   . ++++ |++++.  .  ...++++++++|||++|.+.+++++|++|||+|
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~g  151 (329)
T cd08294          74 KNSKFPVGTIVVASFGWRTHTVSDGKDQPD-LYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNG  151 (329)
T ss_pred             CCCCCCCCCEEEeeCCeeeEEEECCccccc-eEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEec
Confidence            77889999999999999999999999   8 9999 998651  1  123578999999999998889999999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHH
Q 037444          160 ASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL  239 (339)
Q Consensus       160 a~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~  239 (339)
                      ++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+++++.+++++|++||++|++.+..+++
T Consensus       152 a~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~  229 (329)
T cd08294         152 AAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTVLS  229 (329)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHHHH
Confidence            9999999999999999999999999999999999 8999999999887 8888888887668999999999999999999


Q ss_pred             hhccCCEEEEEecccccCCCCCc-cccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccH
Q 037444          240 NMRLRGRIAVCGMISQYNLEKPE-GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENA  318 (339)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~  318 (339)
                      +++++|+++.+|.....+..... .......++.+++++.++....+.....+.++++++++++|.+++.+..+++++++
T Consensus       230 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~  309 (329)
T cd08294         230 HMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENM  309 (329)
T ss_pred             hhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHH
Confidence            99999999999864332111010 12234456677888877655432233356688899999999999876677899999


Q ss_pred             HHHHHHhHcCCccceEEEEe
Q 037444          319 PAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       319 ~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++|++.+.+++..||+++++
T Consensus       310 ~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         310 PQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HHHHHHHHcCCCCCeEEEeC
Confidence            99999999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.5e-43  Score=322.34  Aligned_cols=307  Identities=18%  Similarity=0.203  Sum_probs=257.1

Q ss_pred             cceEEEeeccCCCC----CCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444           10 NKRVILSNYVTGFP----KESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p----~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |||+++.++  |.|    .++.+++++  +|.|. +++ +||+|||.++|||++|++.+.|.+.  ..+|.++|||++|+
T Consensus         1 mka~~~~~~--g~~~~~~~~~~l~~~~--~~~P~-~~~-~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~GhE~~G~   72 (371)
T cd08281           1 MRAAVLRET--GAPTPYADSRPLVIEE--VELDP-PGP-GEVLVKIAAAGLCHSDLSVINGDRP--RPLPMALGHEAAGV   72 (371)
T ss_pred             CcceEEEec--ccccccccCCCceEEE--eecCC-CCC-CeEEEEEEEEeeCccchHhhcCCCC--CCCCccCCccceeE
Confidence            799999998  654    125566654  55563 477 9999999999999999999888643  34688999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEe
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  109 (339)
                           ++++++++||+|++.                                                   |+|+||+.+
T Consensus        73 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v  152 (371)
T cd08281          73 VVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV  152 (371)
T ss_pred             EEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEe
Confidence                 678889999999852                                                   579999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK  188 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~  188 (339)
                      +++. ++++ |++++.. +++.+++++++||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++
T Consensus       153 ~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r  228 (371)
T cd08281         153 SRRS-VVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDK  228 (371)
T ss_pred             cccc-eEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHH
Confidence            9998 9999 9996655 677888899999999878889999999999985 9999999999999999 69999999999


Q ss_pred             HHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccch
Q 037444          189 VDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL  267 (339)
Q Consensus       189 ~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  267 (339)
                      ++.++ ++|+++++++.+. ++.+++++.+++++|++|||+|. ..+..++++++++|+++.+|.....    .....+.
T Consensus       229 ~~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~  302 (371)
T cd08281         229 LALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPA  302 (371)
T ss_pred             HHHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecH
Confidence            99998 9999999998876 88888988877789999999996 5889999999999999999875321    1123455


Q ss_pred             HHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          268 EQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ..++.+++++.|+....+.  ..+.++++++++++|++++  .++.+|+|+++++|++.+.+++..+|+|+
T Consensus       303 ~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         303 LSLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             HHHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            6778899999988765432  1456888999999999975  46778999999999999999988877763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=5.8e-43  Score=316.08  Aligned_cols=324  Identities=36%  Similarity=0.574  Sum_probs=251.9

Q ss_pred             ccceEEEeecc--CCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCC--CCCCCCCCCCCCeeEE
Q 037444            9 SNKRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD--RPSFVDSFHPGELKFW   84 (339)
Q Consensus         9 ~~~a~~~~~~~--~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~--~~~~~~p~~~G~e~~G   84 (339)
                      ..|.+++...+  .+.|.++.+++.+  .|.|.++++ +||||||+++|||+.|+.......  ....++|.++|||++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~-~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G   78 (345)
T cd08293           2 INKRVVLNSRPGKNGNPVAENFRVEE--CTLPDELNE-GQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGG   78 (345)
T ss_pred             cceEEEEecccCCCCCCCccceEEEe--ccCCCCCCC-CeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeE
Confidence            45778888876  5677777777765  555544347 999999999999999975443211  1113457899999999


Q ss_pred             e-----eCCCCCCCCCEEEec-cceeeEEEecCccceeeccCCCCCc---cccccccCchhhhHHHHHHHhcCCCCC--C
Q 037444           85 I-----LHIQNYAKDDLVWGS-TGWEEYSLVTAPQLLIKIQHTDVPL---SYYTGILGMPGVTAYAGLYEVCSPKKG--E  153 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~i~p~~~~~---~~~aa~l~~~~~tA~~~l~~~~~~~~g--~  153 (339)
                      +     ++++.|++||+|+++ ++|+||++++++. ++++ |++++.   ++.+++++.++.|||+++.+.+++++|  +
T Consensus        79 ~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~-~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~  156 (345)
T cd08293          79 VGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSS-LEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQ  156 (345)
T ss_pred             EEEEeccCCCCCCCCCEEEecCCCceeEEEecHHH-eEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCC
Confidence            9     788899999999988 4799999999998 9999 987432   223557888999999999888888877  9


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|||+|++|++|++++|+|+++|+ +|+++++++++.+.+++++|+++++++++. ++.+.+++.+++++|++||++|+.
T Consensus       157 ~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~~  235 (345)
T cd08293         157 TMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGE  235 (345)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCcH
Confidence            999999999999999999999999 899999999999998845999999999886 888999888766899999999998


Q ss_pred             hHHHHHHhhccCCEEEEEecccccCCCCCc-cccc--hHH-HHhccccccceecccccchhHHHHHHHHHHHHcCCceee
Q 037444          233 MLDAVLLNMRLRGRIAVCGMISQYNLEKPE-GVHN--LEQ-LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV  308 (339)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~  308 (339)
                      .+..++++|+++|+++.+|..+..+..... ....  ... ...++++..++.....+....+.++++++++++|.+++.
T Consensus       236 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~  315 (345)
T cd08293         236 ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK  315 (345)
T ss_pred             HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce
Confidence            889999999999999999864321110000 0111  111 122344433333222223335668889999999999987


Q ss_pred             eeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          309 EDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       309 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...+++++++++|++.+.+++..||+|+++
T Consensus       316 ~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         316 ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            666779999999999999998899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=8.9e-43  Score=312.19  Aligned_cols=316  Identities=42%  Similarity=0.686  Sum_probs=252.0

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--eCC
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--LHI   88 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--~~v   88 (339)
                      |.+++.+.+++.|.++.+++.+  .|.| .+++ +||||||.++|+|+.++.....    ....|.++|+|++|+  +..
T Consensus         2 ~~~~~~~~~~~~~~~~~l~~~~--~~~p-~~~~-~evlv~v~a~~~n~~~~~g~~~----~~~~~~i~G~~~~g~v~~~~   73 (325)
T TIGR02825         2 KTWTLKKHFVGYPTDSDFELKT--VELP-PLNN-GEVLLEALFLSVDPYMRVAAKR----LKEGDTMMGQQVARVVESKN   73 (325)
T ss_pred             cEEEEecCCCCCCCCCceEEEe--ccCC-CCCC-CcEEEEEEEEecCHHHhcccCc----CCCCCcEecceEEEEEEeCC
Confidence            5677777777888878888765  5556 3478 9999999999999987654322    123467999999999  555


Q ss_pred             CCCCCCCEEEeccceeeEEEecCccceeecc---CCCCCccccc-cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchH
Q 037444           89 QNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQ---HTDVPLSYYT-GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAV  164 (339)
Q Consensus        89 ~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~---p~~~~~~~~a-a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~  164 (339)
                      +.|++||+|+++++|++|+.++.+. +.++.   |++++.. ++ +++++++.|||+++.+.+++++|++|||+|++|++
T Consensus        74 ~~~~~GdrV~~~~~~~~~~~~~~~~-~~~l~~~~p~~~~~~-~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~v  151 (325)
T TIGR02825        74 VALPKGTIVLASPGWTSHSISDGKD-LEKLLTEWPDTLPLS-LALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAV  151 (325)
T ss_pred             CCCCCCCEEEEecCceeeEEechhh-eEEccccccCCCCHH-HHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHH
Confidence            6799999999999999999999877 65551   5664433 44 67999999999999888999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccC
Q 037444          165 GQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR  244 (339)
Q Consensus       165 G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~  244 (339)
                      |++++|+|+..|++|+++++++++.+.++ ++|+++++++++..++.+.++..+++++|++||++|+..+..++++++++
T Consensus       152 G~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~  230 (325)
T TIGR02825       152 GSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKF  230 (325)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcC
Confidence            99999999999999999999999999998 89999999987631566666666655899999999998889999999999


Q ss_pred             CEEEEEecccccCCCCCcc-ccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHH
Q 037444          245 GRIAVCGMISQYNLEKPEG-VHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAAL  322 (339)
Q Consensus       245 G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~  322 (339)
                      |+++.+|............ ......++.+++++.++....+ .+...+.++++++++++|++++.+..+|+++++++|+
T Consensus       231 G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~  310 (325)
T TIGR02825       231 GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAF  310 (325)
T ss_pred             cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHH
Confidence            9999998754321100111 1123445667777777665333 2233567889999999999998877789999999999


Q ss_pred             HHhHcCCccceEEEE
Q 037444          323 VGLFTGRNVGKQLVA  337 (339)
Q Consensus       323 ~~~~~~~~~gkvvv~  337 (339)
                      +.+.+++..||+|++
T Consensus       311 ~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       311 MGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHhcCCCCCeEEeC
Confidence            999999999999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=6.6e-43  Score=316.83  Aligned_cols=304  Identities=18%  Similarity=0.207  Sum_probs=253.9

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +|||+++.++  +.|    ++++  ++|.| ++++ +||+|||.++|+|++|++...|...  ..+|.++|||++|+   
T Consensus         1 ~mka~~~~~~--~~~----~~~~--~~~~p-~~~~-~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e~~G~V~~   68 (358)
T TIGR03451         1 TVRGVIARSK--GAP----VELE--TIVVP-DPGP-GEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHEAAGVVEA   68 (358)
T ss_pred             CcEEEEEccC--CCC----CEEE--EEECC-CCCC-CeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccceEEEEEE
Confidence            5899999997  666    3554  46666 3478 9999999999999999998888543  34688999999999   


Q ss_pred             --eCCCCCCCCCEEEe-------------------------------------------ccceeeEEEecCccceeeccC
Q 037444           86 --LHIQNYAKDDLVWG-------------------------------------------STGWEEYSLVTAPQLLIKIQH  120 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~-------------------------------------------~g~~~~~~~v~~~~~~~~i~p  120 (339)
                        +++++|++||+|++                                           .|+|+||+.+++.. ++++ |
T Consensus        69 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~i-p  146 (358)
T TIGR03451        69 VGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQ-CTKV-D  146 (358)
T ss_pred             eCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhh-eEEC-C
Confidence              77888999999975                                           27899999999998 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 037444          121 TDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD  199 (339)
Q Consensus       121 ~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~  199 (339)
                      ++++.. +++.+++.+.+||+++.+.+.+++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++++.++ ++|++
T Consensus       147 ~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~  223 (358)
T TIGR03451       147 PAADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGAT  223 (358)
T ss_pred             CCCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCc
Confidence            986555 677888889999999878888999999999985 9999999999999999 5999999999999998 99999


Q ss_pred             eeeeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccc
Q 037444          200 DAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL  277 (339)
Q Consensus       200 ~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (339)
                      +++++.+. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .....+...++.+++++
T Consensus       224 ~~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i  298 (358)
T TIGR03451       224 HTVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGAL  298 (358)
T ss_pred             eEEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEE
Confidence            99998876 888889988887 89999999996 5889999999999999999975321    11234455677888888


Q ss_pred             cceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          278 EGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       278 ~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .+++.....  ..+.++++++++++|.+++  .++.+|+++++++|++.+.+++.. |+++.
T Consensus       299 ~~~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       299 KSSWYGDCL--PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             EEeecCCCC--cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            877543211  1466889999999999975  467889999999999999888766 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.3e-42  Score=311.08  Aligned_cols=310  Identities=22%  Similarity=0.233  Sum_probs=254.2

Q ss_pred             cceEEEeeccCCCC-CCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444           10 NKRVILSNYVTGFP-KESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p-~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      |||++++++  +.| ..+  .++..+.|.|. +++ +||+||+.++++|++|++.+.|.+.....+|.++|||++|+   
T Consensus         1 m~a~~~~~~--~~~~~~~--~~~~~~~~~p~-~~~-~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~   74 (324)
T cd08291           1 MKALLLEEY--GKPLEVK--ELSLPEPEVPE-PGP-GEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVA   74 (324)
T ss_pred             CeEEEEeec--CCCcccc--EEEecccCCCC-CCC-CeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEE
Confidence            689999887  655 112  34445566674 478 99999999999999999988886543234678999999999   


Q ss_pred             --eCCCC-CCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           86 --LHIQN-YAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        86 --~~v~~-~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                        +++++ |++||+|+++    |+|++|+.++++. ++++ |++++.. +++++++.++|||.++ ....+ ++++++|+
T Consensus        75 vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~  149 (324)
T cd08291          75 AGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQ-CLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVVH  149 (324)
T ss_pred             ECCCccccCCCCCEEEecCCCCCcchheeeecHHH-eEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEEE
Confidence              67775 9999999986    8899999999998 9999 9996554 5777888889998655 55555 56667666


Q ss_pred             -cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHH
Q 037444          159 -AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDA  236 (339)
Q Consensus       159 -ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~  236 (339)
                       +++|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++++... ++.+.+++.+.+ ++|++||++|+.....
T Consensus       150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~  227 (324)
T cd08291         150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLTGQ  227 (324)
T ss_pred             ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHHHH
Confidence             88999999999999999999999999999999999 8999999998886 898999998877 8999999999988888


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      .+++++++|+++.+|.....+    ....+...++.+++++.++....+ .....+.+++++++++ +.+++.++.+|+|
T Consensus       228 ~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l  302 (324)
T cd08291         228 ILLAMPYGSTLYVYGYLSGKL----DEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPL  302 (324)
T ss_pred             HHHhhCCCCEEEEEEecCCCC----cccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcH
Confidence            999999999999998754321    111334566788999888876554 2223567888899988 9999988889999


Q ss_pred             ccHHHHHHHhHcCCccceEEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +++++|++.+.+++..||+++.
T Consensus       303 ~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         303 ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHHHHhCCCCCeEEeC
Confidence            9999999999999999999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1e-42  Score=285.92  Aligned_cols=320  Identities=21%  Similarity=0.235  Sum_probs=268.4

Q ss_pred             ccccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCee
Q 037444            3 AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELK   82 (339)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~   82 (339)
                      +.+|+...|+++|.++  |.|. ++++++..++|  ..++  ++|+||..|+.|||+|+..++|.++.+...|.+-|.|+
T Consensus        13 a~q~~~~~kalvY~~h--gdP~-kVlql~~~~~p--~~~~--s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEG   85 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEH--GDPA-KVLQLKNLELP--AVPG--SDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEG   85 (354)
T ss_pred             ccccccccceeeeccc--CCch-hhheeecccCC--CCCC--CceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcc
Confidence            4567788999999999  9996 77888776654  3334  57999999999999999999999987777899999999


Q ss_pred             EEe-----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCC
Q 037444           83 FWI-----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGE  153 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~  153 (339)
                      +|.     +++.+|++||.|+..    |.|++|.+.+++. ++++ ++.+|+. .||++....+|||.+|.+..++++||
T Consensus        86 v~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~-Li~v-d~~~pl~-~AAT~~VNP~TAyrmL~dfv~L~~GD  162 (354)
T KOG0025|consen   86 VGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESD-LIKV-DKDIPLA-SAATLSVNPCTAYRMLKDFVQLNKGD  162 (354)
T ss_pred             eEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccc-eEEc-CCcCChh-hhheeccCchHHHHHHHHHHhcCCCC
Confidence            999     788889999999876    8999999999998 9999 8888877 79999999999999999999999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~  229 (339)
                      +|+..||++++|++++|+||++|++-+-++|+..+.+++++   .+||++||...+- .-.+.-+..... ++.+.|||+
T Consensus       163 ~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalNcV  241 (354)
T KOG0025|consen  163 SVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALNCV  241 (354)
T ss_pred             eeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEecc
Confidence            99999999999999999999999999999988877666553   6899999965432 111222222234 899999999


Q ss_pred             ChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc------cchhHHHHHHHHHHHHcC
Q 037444          230 GGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY------YHLYPKFLELVIPAIREG  303 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l~~g  303 (339)
                      |+....+..+.|.++|.++.+|..+..     ........++++++.++|+++..|      ++...+.+.++.++++.|
T Consensus       242 GGksa~~iar~L~~GgtmvTYGGMSkq-----Pv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G  316 (354)
T KOG0025|consen  242 GGKSATEIARYLERGGTMVTYGGMSKQ-----PVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRG  316 (354)
T ss_pred             CchhHHHHHHHHhcCceEEEecCccCC-----CcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcC
Confidence            999888999999999999999986654     344567788999999999999888      334456788999999999


Q ss_pred             CceeeeeeeeCcccHHHHHHHhHcCC-ccceEEEEe
Q 037444          304 KMVYVEDIAEGLENAPAALVGLFTGR-NVGKQLVAV  338 (339)
Q Consensus       304 ~~~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~  338 (339)
                      +++.+..+..+|++...|++...... ..||.++.+
T Consensus       317 ~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  317 KLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             eeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence            99998888789999999998766533 346777765

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.8e-42  Score=313.34  Aligned_cols=310  Identities=18%  Similarity=0.207  Sum_probs=251.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      .+.+|||+++.+.  +++    +.++  ++|.| .+++ +||+|||.++|+|++|++.+.|.+.....+|.++|||++|+
T Consensus         7 ~~~~mka~~~~~~--~~~----~~~~--e~~~P-~~~~-~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~   76 (381)
T PLN02740          7 KVITCKAAVAWGP--GEP----LVME--EIRVD-PPQK-MEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGI   76 (381)
T ss_pred             cceeeEEEEEecC--CCC----cEEE--EeeCC-CCCC-CeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEE
Confidence            4578999999876  444    3554  46666 3478 99999999999999999999886543345689999999999


Q ss_pred             -----eCCCCCCCCCEEEe------------------------------------------------------ccceeeE
Q 037444           86 -----LHIQNYAKDDLVWG------------------------------------------------------STGWEEY  106 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~------------------------------------------------------~g~~~~~  106 (339)
                           +++++|++||||++                                                      .|+|+||
T Consensus        77 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey  156 (381)
T PLN02740         77 VESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEY  156 (381)
T ss_pred             EEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeE
Confidence                 67888999999985                                                      2689999


Q ss_pred             EEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 037444          107 SLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS  185 (339)
Q Consensus       107 ~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~  185 (339)
                      ++++++. ++++ |++++.. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus       157 ~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~  232 (381)
T PLN02740        157 TVLDSAC-VVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDIN  232 (381)
T ss_pred             EEEehHH-eEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCC
Confidence            9999998 9999 9996655 577888899999999878789999999999995 9999999999999999 69999999


Q ss_pred             HHHHHHHHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCc
Q 037444          186 KEKVDLLKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPE  262 (339)
Q Consensus       186 ~~~~~~~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~  262 (339)
                      +++.+.++ ++|+++++++.+. .++.+.+++.+.+++|++||++|+ ..+..++.+++++ |+++.+|.....    ..
T Consensus       233 ~~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~----~~  307 (381)
T PLN02740        233 PEKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP----KM  307 (381)
T ss_pred             hHHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC----ce
Confidence            99999998 9999999987653 147788888876689999999997 5889999999996 999999875321    01


Q ss_pred             cccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          263 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ....... +.+++++.|+....+..  ...+.++++++.+|.+++  .++.+|+|+++++|++.+.+++.. |+++++
T Consensus       308 ~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~  381 (381)
T PLN02740        308 LPLHPME-LFDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL  381 (381)
T ss_pred             ecccHHH-HhcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence            1122222 23678888776644321  346888999999999875  467789999999999999888664 998864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.8e-42  Score=308.74  Aligned_cols=298  Identities=22%  Similarity=0.217  Sum_probs=246.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.       +.++++  ++|.|. +++ +||+|||.++++|++|++.+.+.......+|.++|||++|+    
T Consensus         1 mka~~~~~~-------~~l~~~--~~~~p~-~~~-~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   69 (339)
T cd08239           1 MRGAVFPGD-------RTVELR--EFPVPV-PGP-GEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAV   69 (339)
T ss_pred             CeEEEEecC-------CceEEE--ecCCCC-CCC-CeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEE
Confidence            689988653       234554  466664 477 99999999999999999987765322223578999999999    


Q ss_pred             -eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.|++||+|+..                               |+|+||+.++++. ++++ |++++.. +++.++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~-~aa~l~  146 (339)
T cd08239          70 GPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKT-LIPL-PDDLSFA-DGALLL  146 (339)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHH-eEEC-CCCCCHH-Hhhhhc
Confidence             778889999999752                               6799999999998 9999 9996554 677889


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDA  212 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  212 (339)
                      +++.|||+++ ....+++|++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|+++++++++. + .+
T Consensus       147 ~~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~  221 (339)
T cd08239         147 CGIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-VQ  221 (339)
T ss_pred             chHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-HH
Confidence            9999999999 4578899999999985 99999999999999998 999999999999998 9999999998876 6 77


Q ss_pred             HHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          213 ALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       213 ~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      .+.+.+.+ ++|++|||+|+. .+..++++|+++|+++.+|.....+     . .....++.+++++.++....     .
T Consensus       222 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~-~~~~~~~~~~~~i~g~~~~~-----~  290 (339)
T cd08239         222 EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT-----I-EVSNDLIRKQRTLIGSWYFS-----V  290 (339)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc-----c-CcHHHHHhCCCEEEEEecCC-----H
Confidence            78887777 899999999986 5588999999999999998743211     1 12345677899988877654     5


Q ss_pred             HHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          291 KFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +.++++++++.+|.+++  .++.+|+++++++|++.+.++. .||+++++
T Consensus       291 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         291 PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            67899999999999874  5677899999999999998875 68999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=8.9e-42  Score=282.13  Aligned_cols=331  Identities=72%  Similarity=1.185  Sum_probs=291.5

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCee----E
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELK----F   83 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~----~   83 (339)
                      .++|.|++.++.+|.|..+++.++..++..+.++++ ++|+||..|-+.+|..+-.+....+....+|+.+|--+    +
T Consensus         2 v~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s-~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV   80 (343)
T KOG1196|consen    2 VTNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGS-GEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGV   80 (343)
T ss_pred             ccccEEEEeccCCCCCccccceeeeeeecccCCCCC-ccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCce
Confidence            467899999988899988888887777655667788 99999999999999998777765554456677777644    3


Q ss_pred             Ee---eCCCCCCCCCEEEeccceeeEEEecCcc-ceeecc-CCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           84 WI---LHIQNYAKDDLVWGSTGWEEYSLVTAPQ-LLIKIQ-HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        84 G~---~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~i~-p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                      |.   ++.+.|++||.|++.-+|.||.+++... ..++++ |.+.|+++...++.++++|||..+++.+..++|++|+|.
T Consensus        81 ~kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VS  160 (343)
T KOG1196|consen   81 AKVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVS  160 (343)
T ss_pred             EEEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEe
Confidence            33   7778899999999999999999997643 244542 457788877899999999999999999999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHH
Q 037444          159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL  238 (339)
Q Consensus       159 ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~  238 (339)
                      ||+|++|+.+.|+|+.+|++|++++.|+++.+++++++|.+.+|||.++.+..+++++..+.|+|+.||.+|+..+...+
T Consensus       161 aAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl  240 (343)
T KOG1196|consen  161 AASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVL  240 (343)
T ss_pred             eccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHH
Confidence            99999999999999999999999999999999999889999999999976888899987777999999999999999999


Q ss_pred             HhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccH
Q 037444          239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENA  318 (339)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~  318 (339)
                      ..|...||++.||..+.+|...+..-......+.|++.+.|+...++.+.+.+.++.+..++++|+|+...+..-.||..
T Consensus       241 ~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~  320 (343)
T KOG1196|consen  241 LNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENG  320 (343)
T ss_pred             HhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhcc
Confidence            99999999999999999987776565667788899999999999888778889999999999999999988887799999


Q ss_pred             HHHHHHhHcCCccceEEEEeC
Q 037444          319 PAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       319 ~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++||.-+.+|+..||.++.++
T Consensus       321 P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  321 PSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             HHHHHHHhccCcccceEEEee
Confidence            999999999999999999873

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=306.47  Aligned_cols=299  Identities=17%  Similarity=0.142  Sum_probs=240.5

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhc-CCCCC-CCCCCCCCCCeeE
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS-KLDRP-SFVDSFHPGELKF   83 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~-~~~~~-~~~~p~~~G~e~~   83 (339)
                      |...+||++++..       .++++++  .|.| + ++ +||+|||.++|||++|++.+. |.... ...+|.++|||++
T Consensus         1 ~~~~~~~~~~~~~-------~~~~~~~--~~~p-~-~~-~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~   68 (343)
T PRK09880          1 MQVKTQSCVVAGK-------KDVAVTE--QEIE-W-NN-NGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVI   68 (343)
T ss_pred             CcccceEEEEecC-------CceEEEe--cCCC-C-CC-CeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccE
Confidence            3457889998764       3345654  5444 3 67 999999999999999998875 33221 2346899999999


Q ss_pred             Ee--e-CCCCCCCCCEEEe-----------------------------------ccceeeEEEecCccceeeccCCCCCc
Q 037444           84 WI--L-HIQNYAKDDLVWG-----------------------------------STGWEEYSLVTAPQLLIKIQHTDVPL  125 (339)
Q Consensus        84 G~--~-~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~  125 (339)
                      |+  . ++++|++||+|+.                                   .|+|+||++++++. ++++ |++++.
T Consensus        69 G~V~~v~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~l~~  146 (343)
T PRK09880         69 GKIVHSDSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQ-CIPY-PEKADE  146 (343)
T ss_pred             EEEEEecCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHH-eEEC-CCCCCH
Confidence            99  3 6788999999974                                   27899999999998 9999 999544


Q ss_pred             cccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          126 SYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       126 ~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                        +++++..++++||+++.+ ....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++++
T Consensus       147 --~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~  221 (343)
T PRK09880        147 --KVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNP  221 (343)
T ss_pred             --HHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecC
Confidence              455677888999999955 56678999999986 9999999999999999 6999999999999999 8999999998


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      ++. ++.+.. .. .+++|++|||+|+ ..+..++++++++|+++.+|....      ....+...++.+++++.++...
T Consensus       222 ~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~  292 (343)
T PRK09880        222 QND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF  292 (343)
T ss_pred             Ccc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec
Confidence            775 654322 21 2369999999997 578899999999999999987432      1234556777889988887532


Q ss_pred             cccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                            .+.++++++++++|++++  .++.+|+++++++|++.+.++...||+++.+
T Consensus       293 ------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        293 ------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence                  345889999999999986  4667899999999999999888789999874

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.9e-41  Score=306.83  Aligned_cols=300  Identities=15%  Similarity=0.153  Sum_probs=239.1

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ..||++.+...  +.+  ..+++  .++|.| .+++ +||+|||.++|||++|++.+.|.+. ...+|.++|||++|+  
T Consensus         9 ~~~~~~~~~~~--~~~--~~l~~--~~~~~p-~~~~-~eVlV~v~~~gic~sD~~~~~g~~~-~~~~p~i~GhE~~G~V~   79 (360)
T PLN02586          9 HPQKAFGWAAR--DPS--GVLSP--FHFSRR-ENGD-EDVTVKILYCGVCHSDLHTIKNEWG-FTRYPIVPGHEIVGIVT   79 (360)
T ss_pred             chhheeEEEec--CCC--CCceE--EeecCC-CCCC-CeEEEEEEEecCChhhHhhhcCCcC-CCCCCccCCcceeEEEE
Confidence            34555555444  333  22344  446666 4478 9999999999999999998887543 235688999999999  


Q ss_pred             ---eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCCCC
Q 037444           86 ---LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTDVP  124 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~  124 (339)
                         +++++|++||+|+.                                      .|+|+||++++++. ++++ |++++
T Consensus        80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~ls  157 (360)
T PLN02586         80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHF-VLRF-PDNLP  157 (360)
T ss_pred             EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHH-eeeC-CCCCC
Confidence               78888999999973                                      27899999999998 9999 99966


Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHhCCCeeee
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD-LLKNKFGFDDAFN  203 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~-~~~~~~g~~~v~~  203 (339)
                      .. +++++++.+.|||+++.+...+++|++|+|.|+ |++|++++|+|+.+|++|++++.++++.. .++ ++|++++++
T Consensus       158 ~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~~vi~  234 (360)
T PLN02586        158 LD-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGADSFLV  234 (360)
T ss_pred             HH-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCcEEEc
Confidence            55 688899999999999976667789999999875 99999999999999999998887776654 445 899999988


Q ss_pred             CCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceec
Q 037444          204 YKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLA  282 (339)
Q Consensus       204 ~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (339)
                      +.+.    +.+++.++ ++|++||++|+ ..+..++++++++|+++.+|....      ....+...++.++..+.++..
T Consensus       235 ~~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~~  303 (360)
T PLN02586        235 STDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------PLELPIFPLVLGRKLVGGSDI  303 (360)
T ss_pred             CCCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------CCccCHHHHHhCCeEEEEcCc
Confidence            6653    24555443 69999999997 478999999999999999986432      123445566677777777665


Q ss_pred             ccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          283 GDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       283 ~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ..     ...++++++++++|++++.+. +|+|+++++|++.+.+++..||+|+++
T Consensus       304 ~~-----~~~~~~~~~li~~g~i~~~~~-~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        304 GG-----IKETQEMLDFCAKHNITADIE-LIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             CC-----HHHHHHHHHHHHhCCCCCcEE-EEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            44     467899999999999998764 699999999999999998889999875

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-41  Score=282.93  Aligned_cols=308  Identities=20%  Similarity=0.215  Sum_probs=263.6

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      ..++||++.++.  ++|    |.+++.+.+   ||+. +||+||+.++++|++|...+.|.. +...+|.++|||.+|+ 
T Consensus         5 vI~CKAAV~w~a--~~P----L~IEei~V~---pPka-~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHEaaGIV   73 (375)
T KOG0022|consen    5 VITCKAAVAWEA--GKP----LVIEEIEVA---PPKA-HEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHEAAGIV   73 (375)
T ss_pred             ceEEeEeeeccC--CCC----eeEEEEEeC---CCCC-ceEEEEEEEEeeccccceeecCCC-ccccCceEecccceeEE
Confidence            467999999999  888    577766665   5577 999999999999999999999976 4567899999999999 


Q ss_pred             ----eCCCCCCCCCEEEec----------------------------------------------------cceeeEEEe
Q 037444           86 ----LHIQNYAKDDLVWGS----------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~v  109 (339)
                          ++|+++++||+|+.+                                                    .+|+||.++
T Consensus        74 ESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv  153 (375)
T KOG0022|consen   74 ESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVV  153 (375)
T ss_pred             EEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEe
Confidence                889999999999864                                                    278999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK  188 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~  188 (339)
                      +... +.+| ++..|++ .++.|.+...|+|-|..+.+++++|+++.|.| .|++|+++++-||+.|| ++|+++-++++
T Consensus       154 ~~~~-v~kI-d~~aPl~-kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~K  229 (375)
T KOG0022|consen  154 DDIS-VAKI-DPSAPLE-KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDK  229 (375)
T ss_pred             ecce-eEec-CCCCChh-heeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHH
Confidence            9998 9999 7787887 78899999999999999999999999999999 59999999999999999 99999999999


Q ss_pred             HHHHHHHhCCCeeeeCCChh-hHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCcccc
Q 037444          189 VDLLKNKFGFDDAFNYKEEP-DLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVH  265 (339)
Q Consensus       189 ~~~~~~~~g~~~v~~~~~~~-~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~  265 (339)
                      .+.++ ++|+.+.+|..+.. .+.+.+++.|++|+|+-|||+|+ +.+.+++.+...+ |.-+.+|.....    ...+.
T Consensus       230 f~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~i~~  304 (375)
T KOG0022|consen  230 FEKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QEIST  304 (375)
T ss_pred             HHHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----ccccc
Confidence            99999 99999999877421 48889999999999999999997 6889999999997 999999985432    22333


Q ss_pred             chHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          266 NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ..+.++. +.++.|+.++.+..  ++++..+.+.+.++++...  ++..+||+++++||+.|.+|++. |.|+.+
T Consensus       305 ~p~~l~~-GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  305 RPFQLVT-GRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             chhhhcc-ccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence            4444444 66777877776643  6778899999999988865  55566999999999999999988 777754

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=9.2e-41  Score=303.23  Aligned_cols=300  Identities=16%  Similarity=0.149  Sum_probs=242.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .+.||+.+...  +.+  ..+++  .+.|.| .+++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+  
T Consensus         3 ~~~~a~~~~~~--~~~--~~l~~--~~~~~p-~~~~-~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv   73 (375)
T PLN02178          3 DQNKAFGWAAN--DES--GVLSP--FHFSRR-ENGE-NDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIAT   73 (375)
T ss_pred             ccceeEEEEEc--cCC--CCceE--EeecCC-CCCC-CeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEE
Confidence            35577777776  554  23344  445666 4588 99999999999999999998875421 24578999999999  


Q ss_pred             ---eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCCCC
Q 037444           86 ---LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTDVP  124 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~  124 (339)
                         +++++|++||+|+.                                      .|+|+||+.++++. ++++ |++++
T Consensus        74 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~ls  151 (375)
T PLN02178         74 KVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRF-VLSI-PDGLP  151 (375)
T ss_pred             EECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHH-eEEC-CCCCC
Confidence               78889999999973                                      26899999999998 9999 99966


Q ss_pred             ccccccccCchhhhHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCCeee
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKNKFGFDDAF  202 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~~~g~~~v~  202 (339)
                      .. +++++++.+.|||+++.+... .++|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++ ++|+++++
T Consensus       152 ~~-~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i  228 (375)
T PLN02178        152 SD-SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFL  228 (375)
T ss_pred             HH-HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEE
Confidence            55 677889999999999855433 368999999986 999999999999999999999877655 56777 89999998


Q ss_pred             eCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccccee
Q 037444          203 NYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFL  281 (339)
Q Consensus       203 ~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (339)
                      ++.+.    +.+++.++ ++|++|||+|.. .+..++++++++|+++.+|....      ....+...++.+++++.|+.
T Consensus       229 ~~~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------~~~~~~~~~~~~~~~i~g~~  297 (375)
T PLN02178        229 VTTDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------PLDLPIFPLVLGRKMVGGSQ  297 (375)
T ss_pred             cCcCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------CCccCHHHHHhCCeEEEEeC
Confidence            86542    34555543 699999999976 78999999999999999987432      12345567778899988877


Q ss_pred             cccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          282 AGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       282 ~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...     .+.+.++++++++|++++.+. +|+|+++++|++.+.+++..||+|+++
T Consensus       298 ~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        298 IGG-----MKETQEMLEFCAKHKIVSDIE-LIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             ccC-----HHHHHHHHHHHHhCCCcccEE-EEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence            655     567899999999999998774 599999999999999998889999875

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=9.2e-41  Score=304.09  Aligned_cols=305  Identities=19%  Similarity=0.194  Sum_probs=247.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ++|||+++.+.  +++    +++++  .|.| ++++ +||+|||.++|+|++|++.+.|... ...+|.++|||++|+  
T Consensus         1 ~~~ka~~~~~~--~~~----~~l~~--~~~p-~~~~-~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~   69 (369)
T cd08301           1 ITCKAAVAWEA--GKP----LVIEE--VEVA-PPQA-MEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVE   69 (369)
T ss_pred             CccEEEEEecC--CCC----cEEEE--eeCC-CCCC-CeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEE
Confidence            47899999886  444    45654  5555 4478 9999999999999999998888543 235688999999999  


Q ss_pred             ---eCCCCCCCCCEEEec----------------------------------------------------cceeeEEEec
Q 037444           86 ---LHIQNYAKDDLVWGS----------------------------------------------------TGWEEYSLVT  110 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~v~  110 (339)
                         +++++|++||||++.                                                    |+|+||+.++
T Consensus        70 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~  149 (369)
T cd08301          70 SVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVH  149 (369)
T ss_pred             EeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEe
Confidence               678889999999863                                                    5799999999


Q ss_pred             CccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 037444          111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKV  189 (339)
Q Consensus       111 ~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~  189 (339)
                      ++. ++++ |++++.. +++.+++++.+||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.
T Consensus       150 ~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~  225 (369)
T cd08301         150 VGC-VAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKF  225 (369)
T ss_pred             ccc-EEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            998 9999 9996655 677888899999999878889999999999985 9999999999999999 899999999999


Q ss_pred             HHHHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccC-CEEEEEecccccCCCCCccccc
Q 037444          190 DLLKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHN  266 (339)
Q Consensus       190 ~~~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  266 (339)
                      +.++ ++|++.++++... +++.+.+++.+++++|++|||+|+. .+..++.+++++ |+++.+|.....    ......
T Consensus       226 ~~~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~----~~~~~~  300 (369)
T cd08301         226 EQAK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKD----AVFSTH  300 (369)
T ss_pred             HHHH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCC----cccccC
Confidence            9998 9999988887641 1567778887766899999999964 788999999996 999999975431    111222


Q ss_pred             hHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ...+ .+++++.|+....+.  .+..++++++++.+|.++.  .+..+|+|+++++|++.+.+++.. |+++
T Consensus       301 ~~~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         301 PMNL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             HHHH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            2333 368888887665432  2456888999999998865  367789999999999999988765 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.1e-40  Score=303.63  Aligned_cols=303  Identities=18%  Similarity=0.177  Sum_probs=248.4

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ..|||+++.+.  ++    .+.++  ++|.|. +++ +||+|||.++|+|++|++.+.+.    ..+|.++|||++|+  
T Consensus        11 ~~mka~~~~~~--~~----~~~~~--e~~~P~-~~~-~eVlVkv~~~gic~sD~~~~~g~----~~~p~i~GhE~~G~V~   76 (378)
T PLN02827         11 ITCRAAVAWGA--GE----ALVME--EVEVSP-PQP-LEIRIKVVSTSLCRSDLSAWESQ----ALFPRIFGHEASGIVE   76 (378)
T ss_pred             ceeEEEEEecC--CC----CceEE--EeecCC-CCC-CEEEEEEEEEecChhHHHHhcCC----CCCCeeecccceEEEE
Confidence            56999999774  22    24554  466663 478 99999999999999999887763    24578999999999  


Q ss_pred             ---eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecC
Q 037444           86 ---LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTA  111 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  111 (339)
                         +++++|++||+|++.                                                   |+|+||+.+++
T Consensus        77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~  156 (378)
T PLN02827         77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS  156 (378)
T ss_pred             EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence               778889999999863                                                   68999999999


Q ss_pred             ccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 037444          112 PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD  190 (339)
Q Consensus       112 ~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~  190 (339)
                      +. ++++ |++++.. +++.+++++.++|+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+
T Consensus       157 ~~-~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~  232 (378)
T PLN02827        157 GC-AVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAE  232 (378)
T ss_pred             hh-eEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            98 9999 9996654 577788888999998877788999999999985 9999999999999999 5888888999999


Q ss_pred             HHHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccC-CEEEEEecccccCCCCCccccc-
Q 037444          191 LLKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHN-  266 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-  266 (339)
                      .++ ++|+++++++.+. +++.+.+++.+.+++|++||++|.. .+..++++++++ |+++.+|.+...      .... 
T Consensus       233 ~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~------~~~~~  305 (378)
T PLN02827        233 KAK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK------PEVSA  305 (378)
T ss_pred             HHH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC------ccccc
Confidence            998 9999999987641 1677788887766899999999974 789999999998 999999875321      1112 


Q ss_pred             hHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...++.+++++.|+....+..  ...++++++++++|++++  .++.+|+|+++++|++.+.+++. +|+|+.+
T Consensus       306 ~~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        306 HYGLFLSGRTLKGSLFGGWKP--KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             cHHHHhcCceEEeeecCCCch--hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence            235677899998877654321  346788999999999998  67888999999999999998876 5999876

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.5e-40  Score=302.08  Aligned_cols=305  Identities=20%  Similarity=0.210  Sum_probs=242.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++...  +++    ++++  ++|.|. +++ +||+|||.++|+|++|++.+.|.++ ...+|.++|||++|+    
T Consensus         2 ~~a~~~~~~--~~~----l~~~--~~~~P~-~~~-~eVlI~v~a~gi~~sD~~~~~g~~~-~~~~p~i~GhE~~G~V~~v   70 (368)
T TIGR02818         2 SRAAVAWAA--GQP----LKIE--EVDVEM-PQK-GEVLVRIVATGVCHTDAFTLSGADP-EGVFPVILGHEGAGIVEAV   70 (368)
T ss_pred             ceEEEEecC--CCC----eEEE--EecCCC-CCC-CeEEEEEEEecccHHHHHHhcCCCC-CCCCCeeeccccEEEEEEE
Confidence            788998875  433    4554  466663 477 9999999999999999999888653 234689999999999    


Q ss_pred             -eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecCcc
Q 037444           86 -LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTAPQ  113 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~~  113 (339)
                       +++++|++||||++.                                                   |+|+||+.++++.
T Consensus        71 G~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  150 (368)
T TIGR02818        71 GEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS  150 (368)
T ss_pred             CCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhh
Confidence             678889999999753                                                   4899999999998


Q ss_pred             ceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Q 037444          114 LLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLL  192 (339)
Q Consensus       114 ~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~  192 (339)
                       ++++ |++++.. +++.+++++.+||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       151 -~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       151 -LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             -eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence             9999 9996655 677888899999999978889999999999985 9999999999999999 799999999999999


Q ss_pred             HHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCccccchHH
Q 037444          193 KNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHNLEQ  269 (339)
Q Consensus       193 ~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  269 (339)
                      + ++|+++++++.+. .++.+.+++++.+++|++|||+|+ ..+..++++++++ |+++.+|.....    .........
T Consensus       227 ~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~  301 (368)
T TIGR02818       227 K-KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQ  301 (368)
T ss_pred             H-HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHH
Confidence            8 9999999987631 156777888877789999999996 5788999999986 999999875321    011122233


Q ss_pred             HHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          270 LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++. +..+.++.....  .....+.++++++++|.+++  .++.+|+|+++++|++.+.+++. .|+++++
T Consensus       302 ~~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       302 LVT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             Hhc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            332 333445433221  12456889999999999864  47788999999999999988765 5999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.1e-40  Score=301.41  Aligned_cols=305  Identities=23%  Similarity=0.251  Sum_probs=244.0

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +|||+++.+.  +++    ++++  +.|.|. +++ +||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+   
T Consensus         2 ~~~a~~~~~~--~~~----~~~~--~~~~P~-~~~-~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~   70 (368)
T cd08300           2 TCKAAVAWEA--GKP----LSIE--EVEVAP-PKA-GEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVES   70 (368)
T ss_pred             cceEEEEecC--CCC----cEEE--EeecCC-CCC-CEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEEE
Confidence            5899998875  444    4554  466663 478 99999999999999999988876532 35688999999999   


Q ss_pred             --eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecCc
Q 037444           86 --LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTAP  112 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~  112 (339)
                        +++++|++||+|++.                                                   |+|+||+.++++
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  150 (368)
T cd08300          71 VGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEI  150 (368)
T ss_pred             eCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchh
Confidence              678889999999863                                                   479999999999


Q ss_pred             cceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 037444          113 QLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDL  191 (339)
Q Consensus       113 ~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~  191 (339)
                      . ++++ |++++.. +++.+++++.+||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.
T Consensus       151 ~-~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~  226 (368)
T cd08300         151 S-VAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFEL  226 (368)
T ss_pred             c-eEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            8 9999 9996655 677888899999999878789999999999985 9999999999999999 79999999999999


Q ss_pred             HHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCccccchH
Q 037444          192 LKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHNLE  268 (339)
Q Consensus       192 ~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  268 (339)
                      ++ ++|+++++++++. +++.+.+++++++++|+||||+|+ ..+..++++++++ |+++.+|.....    ........
T Consensus       227 ~~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~  301 (368)
T cd08300         227 AK-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPF  301 (368)
T ss_pred             HH-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHH
Confidence            98 9999999988753 147788888877799999999997 5889999999986 999999875321    00111222


Q ss_pred             HHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          269 QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .+. ++..+.++....+.  ..+.+.++++++++|++++  .++.+|+||++++|++.+.+++. .|++++
T Consensus       302 ~~~-~~~~~~g~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         302 QLV-TGRVWKGTAFGGWK--SRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             HHh-hcCeEEEEEecccC--cHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            222 23344554433321  2456888999999999985  36778999999999999988765 488874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=5.9e-40  Score=293.64  Aligned_cols=291  Identities=15%  Similarity=0.078  Sum_probs=238.3

Q ss_pred             eEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----e
Q 037444           12 RVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----L   86 (339)
Q Consensus        12 a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~   86 (339)
                      |+++.++  |.|....++++  ++|.|. +++ +||+|||.++|+|++|++.+.|.++. ..+|.++|||++|+     +
T Consensus         1 ~~~~~~~--g~~~~~~l~~~--~~p~P~-~~~-~evlVkv~~~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~   73 (329)
T TIGR02822         1 AWEVERP--GPIEDGPLRFV--ERPVPR-PGP-GELLVRVRACGVCRTDLHVSEGDLPV-HRPRVTPGHEVVGEVAGRGA   73 (329)
T ss_pred             CeeeecC--CcCCCCCceEE--eCCCCC-CCC-CeEEEEEEEEeecchhHHHHcCCCCC-CCCCccCCcceEEEEEEECC
Confidence            3566665  65543456665  466664 488 99999999999999999999886532 23578999999999     7


Q ss_pred             CCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCch
Q 037444           87 HIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMP  135 (339)
Q Consensus        87 ~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~  135 (339)
                      ++++|++||+|+.                               .|+|+||+.++++. ++++ |++++.. +++++++.
T Consensus        74 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~~~~-~aa~l~~~  150 (329)
T TIGR02822        74 DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAF-AYRL-PTGYDDV-ELAPLLCA  150 (329)
T ss_pred             CCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEecccc-EEEC-CCCCCHH-HhHHHhcc
Confidence            7888999999973                               27899999999998 9999 9996655 67789999


Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       136 ~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      +.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|++++++..+. .      
T Consensus       151 ~~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~------  220 (329)
T TIGR02822       151 GIIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P------  220 (329)
T ss_pred             chHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C------
Confidence            999999994 588999999999997 99999999999999999999999999999999 9999999875432 1      


Q ss_pred             HhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          216 RCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                         .+++|+++++.+. ..+..++++++++|+++.+|.....     ........++.+++++.++....     +..+.
T Consensus       221 ---~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~  287 (329)
T TIGR02822       221 ---PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT-----RADAR  287 (329)
T ss_pred             ---cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC-----HHHHH
Confidence               1268999988874 6889999999999999999974321     12234556677888888765543     55678


Q ss_pred             HHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          295 LVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       295 ~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ++++++++|++++ ++.+|+|+++++|++.+.+++..||+|+
T Consensus       288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence            8999999999985 5678999999999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=294.90  Aligned_cols=305  Identities=18%  Similarity=0.176  Sum_probs=239.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +     .+++  .+.|.|.++++ +||+|||.++++|++|++.+....  ...+|.++|||++|+    
T Consensus         1 Mka~~~~~~--~-----~~~~--~~~~~P~~~~~-~evlV~v~~~gi~~~D~~~~~~~~--~~~~p~i~G~e~~G~V~~v   68 (347)
T PRK10309          1 MKSVVNDTD--G-----IVRV--AESPIPEIKHQ-DDVLVKVASSGLCGSDIPRIFKNG--AHYYPITLGHEFSGYVEAV   68 (347)
T ss_pred             CceEEEeCC--C-----ceEE--EECCCCCCCCC-CEEEEEEEEEEEchhcHHHHhCCC--CCCCCcccccceEEEEEEe
Confidence            689999765  3     2345  44666644357 999999999999999997543211  123578999999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       +++++|++||+|++.                              |+|+||+.++++. ++++ |++++.. +++ +..
T Consensus        69 G~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~l-P~~~s~~-~aa-~~~  144 (347)
T PRK10309         69 GSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKN-LFAL-PTDMPIE-DGA-FIE  144 (347)
T ss_pred             CCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHH-eEEC-cCCCCHH-Hhh-hhh
Confidence             778889999999863                              7899999999998 9999 9995443 344 334


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      +..++++++ +...+++|++|+|+| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++++++++.. + .++
T Consensus       145 ~~~~~~~~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~  219 (347)
T PRK10309        145 PITVGLHAF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-APQ  219 (347)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-HHH
Confidence            667788886 567889999999997 599999999999999996 788888999999988 8999999988765 5 566


Q ss_pred             HHHhCCC-Ccc-EEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          214 LKRCFPQ-GID-IYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       214 v~~~~~g-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      +.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|..... .  ......+..++.+++++.|+..........
T Consensus       220 ~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  296 (347)
T PRK10309        220 IQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSSPWPG  296 (347)
T ss_pred             HHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccCCcch
Confidence            7777766 898 99999997 5889999999999999999875421 0  111112345677889998876532211113


Q ss_pred             HHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          291 KFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +.++++++++++|.++  +.++.+|+|+++++|++.+.+++..||+|+++
T Consensus       297 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        297 QEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            5678899999999985  55778899999999999999988889999986

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.7e-39  Score=294.07  Aligned_cols=300  Identities=18%  Similarity=0.155  Sum_probs=244.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ..++|+++++.  +.+    +.++  +.|.| .+++ +||+|||.++++|++|++.+.|.+.. ..+|.++|||++|+  
T Consensus         8 ~~~~~~~~~~~--~~~----~~~~--~~~~p-~~~~-~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv   76 (357)
T PLN02514          8 KKTTGWAARDP--SGH----LSPY--TYTLR-KTGP-EDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVV   76 (357)
T ss_pred             ceEEEEEEecC--CCC----ceEE--eecCC-CCCC-CcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEE
Confidence            34789998886  544    3454  45556 3477 99999999999999999988875432 24578999999999  


Q ss_pred             ---eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCCCC
Q 037444           86 ---LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTDVP  124 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~  124 (339)
                         +++++|++||+|+.                                      .|+|+||+.+++.. ++++ |++++
T Consensus        77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~  154 (357)
T PLN02514         77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKF-VVKI-PEGMA  154 (357)
T ss_pred             EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHH-eEEC-CCCCC
Confidence               67888999999963                                      27899999999998 9999 99966


Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      .. ++++++..+.+||+++.+....++|++++|+| +|++|++++|+|+.+|++|++++.++++++.+.+++|+++++++
T Consensus       155 ~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~  232 (357)
T PLN02514        155 PE-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVS  232 (357)
T ss_pred             HH-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecC
Confidence            55 67889999999999997766678999999996 59999999999999999999999888877666547999887766


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      .+.    +.+++.+. ++|++|||+|. ..+..++++++++|+++.+|.....      .......++.+++++.|+...
T Consensus       233 ~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~  301 (357)
T PLN02514        233 SDA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLGRKVITGSFIG  301 (357)
T ss_pred             CCh----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhCCcEEEEEecC
Confidence            542    23444443 69999999996 5889999999999999999875321      234456677889998888765


Q ss_pred             cccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .     ...++++++++++|++++.+. +|+|+++.+|++.+.+++..||++++++
T Consensus       302 ~-----~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        302 S-----MKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             C-----HHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence            5     567899999999999987664 6999999999999999988899999863

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.4e-39  Score=291.46  Aligned_cols=310  Identities=18%  Similarity=0.247  Sum_probs=256.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.|. +.+++  .++|.|. +.+ +||+|||.++++|+.|+..+.|.+......|.++|||++|+    
T Consensus         1 m~a~~~~~~--~~~~-~~~~~--~~~~~p~-~~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~   73 (324)
T cd08292           1 MRAAVHTQF--GDPA-DVLEI--GEVPKPT-PGA-GEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAV   73 (324)
T ss_pred             CeeEEEccC--CChh-HeEEE--eecCCCC-CCC-CeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEe
Confidence            589999775  5541 22444  5566674 577 99999999999999999988776542233478899999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       ++++.+++||+|++.   |+|++|+.+++.. ++++ |++++.. +++.++..+.+||+++ ..+++++|++|||+|++
T Consensus        74 G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~  149 (324)
T cd08292          74 GEGVKGLQVGQRVAVAPVHGTWAEYFVAPADG-LVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAG  149 (324)
T ss_pred             CCCCCCCCCCCEEEeccCCCcceeEEEEchHH-eEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCCCEEEEcccc
Confidence             677889999999985   7999999999988 9999 9996554 5778888889999998 55899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLN  240 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~  240 (339)
                      |.+|++++|+|+.+|++|++++.++++.+.++ ++|+++++++.+. ++.+.+++.+.+ ++|++|||+|+.....++++
T Consensus       150 g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~  227 (324)
T cd08292         150 GAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSL  227 (324)
T ss_pred             cHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHh
Confidence            99999999999999999999999999999998 7899889988876 888899998887 99999999999888999999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      ++++|+++.+|.....     .........+.+++++.++....+     +......++++++++.+|.+++.+..+|++
T Consensus       228 l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~  302 (324)
T cd08292         228 LGEGGTLVSFGSMSGE-----PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDL  302 (324)
T ss_pred             hcCCcEEEEEecCCCC-----CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecH
Confidence            9999999999874321     112344456678999888776543     223356788999999999998766778999


Q ss_pred             ccHHHHHHHhHcCCccceEEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +++.+|++.+.++...||++++
T Consensus       303 ~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         303 GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHHHHHHHHcCCCCceEEeC
Confidence            9999999999988888898863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2e-39  Score=294.62  Aligned_cols=304  Identities=20%  Similarity=0.213  Sum_probs=244.6

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      +.+||+++.+.  +++    +.+++  +|.| ++++ +||+|||.++++|++|++.+.|...  ..+|.++|||++|+  
T Consensus         1 ~~~ka~~~~~~--~~~----~~~~~--~~~p-~~~~-~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~   68 (365)
T cd08277           1 IKCKAAVAWEA--GKP----LVIEE--IEVA-PPKA-NEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVE   68 (365)
T ss_pred             CccEEEEEccC--CCC----cEEEE--EECC-CCCC-CEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEE
Confidence            36799999876  433    45544  5556 3477 9999999999999999999888553  34578999999999  


Q ss_pred             ---eCCCCCCCCCEEEec--------------------------------------------------cceeeEEEecCc
Q 037444           86 ---LHIQNYAKDDLVWGS--------------------------------------------------TGWEEYSLVTAP  112 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~--------------------------------------------------g~~~~~~~v~~~  112 (339)
                         ++++++++||+|++.                                                  |+|+||+.++++
T Consensus        69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~  148 (365)
T cd08277          69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN  148 (365)
T ss_pred             eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence               678889999999863                                                  579999999999


Q ss_pred             cceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 037444          113 QLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDL  191 (339)
Q Consensus       113 ~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~  191 (339)
                      . ++++ |++++.. +++.+++++.+||+++.+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.
T Consensus       149 ~-~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~  224 (365)
T cd08277         149 Y-VAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEK  224 (365)
T ss_pred             h-eEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence            8 9999 9996655 677888899999999878889999999999974 9999999999999999 79999999999999


Q ss_pred             HHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCccccchH
Q 037444          192 LKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHNLE  268 (339)
Q Consensus       192 ~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~  268 (339)
                      ++ ++|++++++..+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+.+     ......
T Consensus       225 ~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~  298 (365)
T cd08277         225 AK-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAE-----LSIRPF  298 (365)
T ss_pred             HH-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccc-----cccCHh
Confidence            98 8999999887652 145677877776789999999995 5788999999885 9999998754211     122333


Q ss_pred             HHHhccccccceecccccchhHHHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          269 QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .++. ++++.++....+.  ....+++++++++++.++  +.++.+|+|+++++|++.+.+++. .|++++
T Consensus       299 ~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~  365 (365)
T cd08277         299 QLIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT  365 (365)
T ss_pred             HHhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence            3443 7777777665432  134678899999999766  456778999999999999988874 588763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1.3e-39  Score=293.01  Aligned_cols=290  Identities=16%  Similarity=0.109  Sum_probs=222.5

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCC---CCCCCCCCCeeEE
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPS---FVDSFHPGELKFW   84 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~---~~~p~~~G~e~~G   84 (339)
                      |.+++++++..       ++++++  +.|.| + ++ +||+|||+++|||++|++.+.|.+.+.   ..+|.++|||++|
T Consensus         1 ~~~~~~~~~~~-------~~~~~~--~~~~P-~-~~-~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G   68 (341)
T cd08237           1 MINQVYRLVRP-------KFFEVT--YEEEN-L-RE-DWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIG   68 (341)
T ss_pred             CcccceEEecc-------ceEEEe--ecCCC-C-CC-CeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEE
Confidence            35678888653       344554  45556 4 77 999999999999999999998865321   2468999999999


Q ss_pred             e---eCCCCCCCCCEEEec---------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           85 I---LHIQNYAKDDLVWGS---------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        85 ~---~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                      +   .++..|++||||+..                           |+|+||++++++. ++++ |++++.  +.|+++.
T Consensus        69 ~V~~~g~~~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~v-P~~l~~--~~aa~~~  144 (341)
T cd08237          69 VVVSDPTGTYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDR-LVKL-PDNVDP--EVAAFTE  144 (341)
T ss_pred             EEEeeCCCccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHH-eEEC-CCCCCh--HHhhhhc
Confidence            9   455579999999752                           7799999999998 9999 999544  5566778


Q ss_pred             hhhhHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          135 PGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKL-AG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       135 ~~~tA~~~l~~~--~~~~~g~~vlI~ga~g~~G~~ai~la~~-~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      ++++||+++...  ..+++|++|+|+|+ |++|++++|+|+. .| ++|+++.+++++++.++ +++++..++     ++
T Consensus       145 ~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-----~~  217 (341)
T cd08237         145 LVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-----DI  217 (341)
T ss_pred             hHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-----hh
Confidence            999999998543  35689999999996 9999999999986 55 58999999999999988 666543221     11


Q ss_pred             HHHHHHhCCC-CccEEEECCCh----hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          211 DAALKRCFPQ-GIDIYFENVGG----KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       211 ~~~v~~~~~g-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                             ..+ ++|+|||++|+    ..+..++++++++|+++.+|....      ........++.+++++.|+.... 
T Consensus       218 -------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~-  283 (341)
T cd08237         218 -------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSRST-  283 (341)
T ss_pred             -------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecccC-
Confidence                   112 69999999994    378899999999999999997432      12344566788999998876543 


Q ss_pred             cchhHHHHHHHHHHHHcC-----CceeeeeeeeCcccH---HHHHHHhHcCCccceEEEEeC
Q 037444          286 YHLYPKFLELVIPAIREG-----KMVYVEDIAEGLENA---PAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       286 ~~~~~~~l~~~~~~l~~g-----~~~~~~~~~~~l~~~---~~a~~~~~~~~~~gkvvv~~~  339 (339)
                          .+.+++++++++++     .+++.++.+|+++++   .++++...++ ..||+|++++
T Consensus       284 ----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         284 ----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             ----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence                45688999999998     466667778888655   5555544443 6789999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.5e-39  Score=291.49  Aligned_cols=289  Identities=20%  Similarity=0.185  Sum_probs=234.9

Q ss_pred             eEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEe---
Q 037444           28 MKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWG---   99 (339)
Q Consensus        28 ~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~---   99 (339)
                      ++++  ++|.| .+++ +||+|||.++|+|++|++.+.+.......+|.++|||++|+     ++++.+ +||+|++   
T Consensus        11 ~~~~--~~p~P-~~~~-~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~   85 (349)
T TIGR03201        11 MVKT--RVEIP-ELGA-GDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAV   85 (349)
T ss_pred             ceEE--eccCC-CCCC-CeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCC
Confidence            3554  46666 3578 99999999999999999876443222234578999999999     567667 9999985   


Q ss_pred             ---------------------------ccceeeEEEecCccceeeccCC------CCCccccccccCchhhhHHHHHHHh
Q 037444          100 ---------------------------STGWEEYSLVTAPQLLIKIQHT------DVPLSYYTGILGMPGVTAYAGLYEV  146 (339)
Q Consensus       100 ---------------------------~g~~~~~~~v~~~~~~~~i~p~------~~~~~~~aa~l~~~~~tA~~~l~~~  146 (339)
                                                 .|+|+||+.++++. ++++ |+      +++.. .+++++.++.+||+++. .
T Consensus        86 ~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~-~~~i-p~~~~~~~~~~~~-~~a~~~~~~~ta~~a~~-~  161 (349)
T TIGR03201        86 IPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKG-LCVV-DEARLAAAGLPLE-HVSVVADAVTTPYQAAV-Q  161 (349)
T ss_pred             CCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHH-eEEC-CcccccccCCCHH-HhhhhcchHHHHHHHHH-h
Confidence                                       27899999999998 9999 88      65444 57788899999999995 4


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh--hhHHHHHHHhCCC-Ccc
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE--PDLDAALKRCFPQ-GID  223 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~v~~~~~g-~~d  223 (339)
                      .++++|++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++++.+.  .++.+.+++.+++ ++|
T Consensus       162 ~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d  239 (349)
T TIGR03201       162 AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSAREVKKLIKAFAKARGLR  239 (349)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHHHHHHHHhhcccCCCC
Confidence            78999999999998 99999999999999999999999999999998 8999988887653  1567778888877 786


Q ss_pred             ----EEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHH
Q 037444          224 ----IYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP  298 (339)
Q Consensus       224 ----~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  298 (339)
                          ++|||+|+. .+..++++++++|+++.+|.....      .......++.++.++.+.+...     ...++++++
T Consensus       240 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~  308 (349)
T TIGR03201       240 STGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGCP-----PDRYPAALD  308 (349)
T ss_pred             CCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecCC-----HHHHHHHHH
Confidence                899999975 677899999999999999875421      1234456666777777765433     456889999


Q ss_pred             HHHcCCceee-eeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          299 AIREGKMVYV-EDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       299 ~l~~g~~~~~-~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++|++++. +...|+|+++++|++.+.+++..||+++++
T Consensus       309 ~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       309 LVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             HHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence            9999999753 224689999999999999998889998863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.4e-39  Score=288.04  Aligned_cols=317  Identities=24%  Similarity=0.278  Sum_probs=241.6

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCC---CCCCCCCCeeEE
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSF---VDSFHPGELKFW   84 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~---~~p~~~G~e~~G   84 (339)
                      +.++.+++...+ +.+.    .+...+.|.|++ .+ ++++|++.++++||.|+.+..|.+.+..   .+|.+++.++.|
T Consensus         3 ~~~~~~~~~~~~-~~~~----~~~~~~~~iP~~-~~-~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~   75 (347)
T KOG1198|consen    3 KKIRRVSLVSPP-GGGE----VLFSEEVPIPEP-ED-GEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSG   75 (347)
T ss_pred             cccceEEEeccC-CCcc----eEEeecccCCCC-CC-CceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCC
Confidence            445566666651 2221    334455677754 67 9999999999999999999999876544   567555555544


Q ss_pred             e---------eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhc-----
Q 037444           85 I---------LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVC-----  147 (339)
Q Consensus        85 ~---------~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~-----  147 (339)
                      +         ..+..+..||.+...   |+|+||.++++.. ++++ |+++++. ++|++|.++.|||.+|+...     
T Consensus        76 ~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~-~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~  152 (347)
T KOG1198|consen   76 VVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKL-LVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRS  152 (347)
T ss_pred             ceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhh-ccCC-CCccChh-hhhcCchHHHHHHHHHHhccccccc
Confidence            4         223445666666655   7999999999988 9999 9996665 79999999999999999999     


Q ss_pred             -CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          148 -SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       148 -~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                       ++++|++|||+||+|++|++++|+|+++|+..++++.++++.++++ ++|+++++||+++ ++.+.++..+.+++|+||
T Consensus       153 ~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  153 KKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             cccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEE
Confidence             8999999999999999999999999999965555555889999999 9999999999997 999999998844999999


Q ss_pred             ECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccc-----cceeccc-ccchhHHHHHHHHHHH
Q 037444          227 ENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL-----EGFLAGD-YYHLYPKFLELVIPAI  300 (339)
Q Consensus       227 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~l~~~~~~l  300 (339)
                      ||+|+..+..+..++..+|+...++.......... ....+. . .+.+.+     .+..... +.....+.++.+.+++
T Consensus       231 D~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~i  307 (347)
T KOG1198|consen  231 DCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYK-LDDLWQ-S-ANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELI  307 (347)
T ss_pred             ECCCCCccccchhhhccCCceEEEEeccccccccc-cccchh-h-hhhhhheeeeeeccceeeeeecCCHHHHHHHHHHH
Confidence            99999888899999999886555544332211111 010011 0 111111     1111111 1334478899999999


Q ss_pred             HcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          301 REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       301 ~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++|++++.+...||++++.+|++.+.++...||+++.+.
T Consensus       308 e~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  308 EKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            999999999999999999999999999999999999863

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.2e-38  Score=290.64  Aligned_cols=305  Identities=17%  Similarity=0.169  Sum_probs=230.2

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccC------CCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCee
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAE------GSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELK   82 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~------~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~   82 (339)
                      -|||+++.+.       .++++++  +|.|.+.      ++ +||||||.++|||++|++.+.|...  ..+|.++|||+
T Consensus         2 ~mka~v~~~~-------~~~~~~e--~~~P~~~~~~~~~~~-~eVlVkv~a~gIcgsD~~~~~g~~~--~~~p~i~GhE~   69 (393)
T TIGR02819         2 GNRGVVYLGP-------GKVEVQD--IDYPKLELPDGRKCE-HGVILKVVTTNICGSDQHMVRGRTT--APTGLVLGHEI   69 (393)
T ss_pred             CceEEEEecC-------CceeEEe--ccCCcccCCCccCCC-CeEEEEEEEeeecHHHHHHHCCCCC--CCCCcccccee
Confidence            4789988664       2345654  5555431      26 8999999999999999999887542  34689999999


Q ss_pred             EEe-----eCCCCCCCCCEEEe----------------------------------------ccceeeEEEecCc--cce
Q 037444           83 FWI-----LHIQNYAKDDLVWG----------------------------------------STGWEEYSLVTAP--QLL  115 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~~  115 (339)
                      +|+     ++|++|++||||++                                        .|+|+||+.+++.  . +
T Consensus        70 ~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~-l  148 (393)
T TIGR02819        70 TGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN-L  148 (393)
T ss_pred             EEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCc-e
Confidence            999     78999999999954                                        1688999999964  5 9


Q ss_pred             eeccCCCCCcc---ccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEE-EEeCCHHHHHH
Q 037444          116 IKIQHTDVPLS---YYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV-GSAGSKEKVDL  191 (339)
Q Consensus       116 ~~i~p~~~~~~---~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~-~~~~~~~~~~~  191 (339)
                      +++ |++++..   ..++++..++.+||+++ +..++++|++|||.| +|++|++++|+|+.+|++++ ++.+++++.+.
T Consensus       149 ~~v-P~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~  225 (393)
T TIGR02819       149 LKF-PDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ  225 (393)
T ss_pred             EEC-CCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence            999 8874321   13677888999999998 458899999999966 59999999999999999754 45567889999


Q ss_pred             HHHHhCCCeeeeC-CChhhHHHHHHHhCCC-CccEEEECCChh---------------hHHHHHHhhccCCEEEEEeccc
Q 037444          192 LKNKFGFDDAFNY-KEEPDLDAALKRCFPQ-GIDIYFENVGGK---------------MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       192 ~~~~~g~~~v~~~-~~~~~~~~~v~~~~~g-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ++ ++|++. +++ ... ++.+.+.+.+++ ++|++||++|..               .+.+++++++++|+++.+|...
T Consensus       226 a~-~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~  302 (393)
T TIGR02819       226 AR-SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV  302 (393)
T ss_pred             HH-HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence            98 899974 544 333 677788888877 899999999974               7999999999999999999853


Q ss_pred             ccCCCCC-------ccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--ee-eeeCcccHHHHHHH
Q 037444          255 QYNLEKP-------EGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--ED-IAEGLENAPAALVG  324 (339)
Q Consensus       255 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~-~~~~l~~~~~a~~~  324 (339)
                      ..+....       ..++.....+.+++++.+....     ..+++.++++++.+|++++.  +. .+|+|+++++||+.
T Consensus       303 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~  377 (393)
T TIGR02819       303 TEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE  377 (393)
T ss_pred             CcccccccccccccccccchHHhhccCceEEeccCC-----hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence            2110000       0112233334445555442211     13445789999999998753  34 57999999999999


Q ss_pred             hHcCCccceEEEEe
Q 037444          325 LFTGRNVGKQLVAV  338 (339)
Q Consensus       325 ~~~~~~~gkvvv~~  338 (339)
                      +.++.. +|+++++
T Consensus       378 ~~~~~~-~Kvvi~~  390 (393)
T TIGR02819       378 FDAGAA-KKFVIDP  390 (393)
T ss_pred             HhhCCc-eEEEEeC
Confidence            988754 7999876

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.8e-38  Score=287.39  Aligned_cols=297  Identities=21%  Similarity=0.214  Sum_probs=244.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--C--------CCCCCCCCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--P--------SFVDSFHPG   79 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~--------~~~~p~~~G   79 (339)
                      |||+++.+.       +.+.++.  .|.| ++++ +||+||+.++++|++|+..+.+...  .        ...+|.++|
T Consensus         1 mka~~~~~~-------~~l~~~~--~~~p-~~~~-~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G   69 (351)
T cd08233           1 MKAARYHGR-------KDIRVEE--VPEP-PVKP-GEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLG   69 (351)
T ss_pred             CceEEEecC-------CceEEEe--ccCC-CCCC-CeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceec
Confidence            689999764       2346654  5555 4477 9999999999999999876653211  0        123578999


Q ss_pred             CeeEEe-----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCC
Q 037444           80 ELKFWI-----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDV  123 (339)
Q Consensus        80 ~e~~G~-----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~  123 (339)
                      ||++|+     +++++|++||+|++                               .|+|++|+.++.+. ++++ |+++
T Consensus        70 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-~~~l-P~~~  147 (351)
T cd08233          70 HEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYH-VHKL-PDNV  147 (351)
T ss_pred             ccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHH-eEEC-cCCC
Confidence            999999     67888999999985                               37899999999998 9999 9995


Q ss_pred             CccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeee
Q 037444          124 PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAF  202 (339)
Q Consensus       124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~  202 (339)
                      +.. ++ ++..++.+||+++ ...++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++
T Consensus       148 ~~~-~a-a~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i  222 (351)
T cd08233         148 PLE-EA-ALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVL  222 (351)
T ss_pred             CHH-Hh-hhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence            443 34 4447889999999 7789999999999985 9999999999999999 8999999999999998 89999999


Q ss_pred             eCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          203 NYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       203 ~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      ++.+. ++.+.+++.+++ ++|++||++|+ ..+..++++|+++|+++.+|....      ....+...++.+++++.++
T Consensus       223 ~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~  295 (351)
T cd08233         223 DPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGS  295 (351)
T ss_pred             CCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEE
Confidence            98886 888999888877 79999999985 688999999999999999987541      1234556677888998887


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccH-HHHHHHhHcCCcc-ceEEE
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENA-PAALVGLFTGRNV-GKQLV  336 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvv  336 (339)
                      ....     .+.++++++++++|.+++  .+..+|+++++ ++|++.+.+++.. ||+|+
T Consensus       296 ~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         296 ICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             eccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            6544     567899999999999964  46778999996 7899999998864 89987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.9e-38  Score=292.20  Aligned_cols=305  Identities=16%  Similarity=0.120  Sum_probs=236.3

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhh-cCCCCC-----CCCCCCCCCCe
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRM-SKLDRP-----SFVDSFHPGEL   81 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~-~~~~~~-----~~~~p~~~G~e   81 (339)
                      |.|||+++.+.       ..+++  .+.|.|. +++ +||+|||.++|||++|++.+ .|....     ...+|.++|||
T Consensus         1 m~~~a~~~~~~-------~~l~~--~e~p~P~-~~~-~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE   69 (410)
T cd08238           1 MKTKAWRMYGK-------GDLRL--EKFELPE-IAD-DEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE   69 (410)
T ss_pred             CCcEEEEEEcC-------CceEE--EecCCCC-CCC-CeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence            46789988764       23455  4566664 478 99999999999999999876 443211     12357899999


Q ss_pred             eEEe-----eCCC-CCCCCCEEEec-------------------cceeeEEEecCc----cceeeccCCCCCcccccccc
Q 037444           82 KFWI-----LHIQ-NYAKDDLVWGS-------------------TGWEEYSLVTAP----QLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        82 ~~G~-----~~v~-~~~~Gd~V~~~-------------------g~~~~~~~v~~~----~~~~~i~p~~~~~~~~aa~l  132 (339)
                      ++|+     ++++ +|++||||++.                   |+|+||++++++    . ++++ |++++.  +.+++
T Consensus        70 ~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~-~~~l-P~~l~~--~~aal  145 (410)
T cd08238          70 FAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQD-CLLI-YEGDGY--AEASL  145 (410)
T ss_pred             cEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCC-eEEC-CCCCCH--HHHhh
Confidence            9999     6777 59999999863                   789999999986    5 8999 998444  44444


Q ss_pred             Cchhhh---HHHHH--------HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh--
Q 037444          133 GMPGVT---AYAGL--------YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC---YVVGSAGSKEKVDLLKNKF--  196 (339)
Q Consensus       133 ~~~~~t---A~~~l--------~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga---~V~~~~~~~~~~~~~~~~~--  196 (339)
                      ..++.+   ++.++        .+..++++|++|+|+|++|++|++++|+|+.+|+   +|++++.++++++.++ ++  
T Consensus       146 ~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~  224 (410)
T cd08238         146 VEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFP  224 (410)
T ss_pred             cchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhcc
Confidence            333322   33332        2456789999999999999999999999999864   7999999999999998 76  


Q ss_pred             ------CCC-eeeeCCC-hhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccc
Q 037444          197 ------GFD-DAFNYKE-EPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN  266 (339)
Q Consensus       197 ------g~~-~v~~~~~-~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  266 (339)
                            |++ .++++.. . ++.+.+++++++ ++|++||++|+ ..+..++++++++|+++.++.....+   .....+
T Consensus       225 ~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~---~~~~~~  300 (410)
T cd08238         225 PEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN---FSAPLN  300 (410)
T ss_pred             ccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC---cccccc
Confidence                  665 5677654 4 788888888887 99999999985 68899999999999888765421110   112345


Q ss_pred             hHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...++.+++++.|+....     ...++++++++++|++++  .++.+|+|+++++|++.+. ++..||+|+.+
T Consensus       301 ~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         301 FYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             HHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            567788899988876544     567899999999999987  4777899999999999999 77889999976

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.6e-38  Score=287.91  Aligned_cols=295  Identities=17%  Similarity=0.155  Sum_probs=226.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCC--CCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPS--FVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~--~~~p~~~G~e~~G~--   85 (339)
                      |||+++..   +++  + ++++  ++|.| ++++ +||+|||+++|||++|++.+.|.+...  ..+|.++|||++|+  
T Consensus         1 mka~~~~~---~~~--~-l~~~--~~p~p-~~~~-~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~   70 (355)
T cd08230           1 MKAIAVKP---GKP--G-VRVV--DIPEP-EPTP-GEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVE   70 (355)
T ss_pred             CceeEecC---CCC--C-CeEE--eCCCC-CCCC-CeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEE
Confidence            58888874   333  2 4554  46666 4478 999999999999999999998864321  23478999999999  


Q ss_pred             ---eCCCCCCCCCEEEec---------------------------------cceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 ---LHIQNYAKDDLVWGS---------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                         ++ +.|++||||++.                                 |+|+||+.++++. ++++ |+++  + ++
T Consensus        71 ~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~-~~~~-P~~~--~-~~  144 (355)
T cd08230          71 EVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEY-LVKV-PPSL--A-DV  144 (355)
T ss_pred             EecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEecccc-EEEC-CCCC--C-cc
Confidence               66 789999999752                                 6799999999999 9999 9994  4 55


Q ss_pred             cccCchhhhHHHHHHHh------cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCe
Q 037444          130 GILGMPGVTAYAGLYEV------CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDD  200 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~------~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~  200 (339)
                      +++..++.+++.++...      .++++|++|+|+|+ |++|++++|+||.+|++|+++++   ++++++.++ ++|++.
T Consensus       145 a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~  222 (355)
T cd08230         145 GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATY  222 (355)
T ss_pred             eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE
Confidence            66667777766554322      23578999999985 99999999999999999999987   678889888 999986


Q ss_pred             eeeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccc----hHHHHhccc
Q 037444          201 AFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN----LEQLIGKRI  275 (339)
Q Consensus       201 v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~  275 (339)
                       +++.++ ++.+ .+  ..+++|+||||+|+. .+..++++++++|+++.+|......    .....    ...++.+++
T Consensus       223 -v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~~~~~~k~~  293 (355)
T cd08230         223 -VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGR----EFEVDGGELNRDLVLGNK  293 (355)
T ss_pred             -ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCC----ccccChhhhhhhHhhcCc
Confidence             566554 5443 22  124899999999974 7899999999999999999764410    11112    345677899


Q ss_pred             cccceecccccchhHHHHHHHHHHHHcCC------ceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          276 RLEGFLAGDYYHLYPKFLELVIPAIREGK------MVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       276 ~~~~~~~~~~~~~~~~~l~~~~~~l~~g~------~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++.|+....     .+.++++++++.++.      +++.++.+|+++++++|++.+.++.  +|+++++
T Consensus       294 ~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         294 ALVGSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             EEEEecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            988876544     455778888888766      5556788899999999999887654  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=5.5e-38  Score=285.27  Aligned_cols=301  Identities=19%  Similarity=0.187  Sum_probs=241.0

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      ||+++.++  ++    .+++++  .|.| .+++ +||+|||.++++|++|+....|.+.. ..+|.++|||++|+     
T Consensus         2 ka~~~~~~--~~----~l~~~~--~~~p-~~~~-~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG   70 (361)
T cd08231           2 RAAVLTGP--GK----PLEIRE--VPLP-DLEP-GAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALG   70 (361)
T ss_pred             eEEEEcCC--CC----CCEEEe--ccCC-CCCC-CeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeC
Confidence            78888886  42    345654  5556 3477 99999999999999999988886532 35678999999999     


Q ss_pred             eCCCC------CCCCCEEEec-------------------------------------cceeeEEEecCc-cceeeccCC
Q 037444           86 LHIQN------YAKDDLVWGS-------------------------------------TGWEEYSLVTAP-QLLIKIQHT  121 (339)
Q Consensus        86 ~~v~~------~~~Gd~V~~~-------------------------------------g~~~~~~~v~~~-~~~~~i~p~  121 (339)
                      ++++.      |++||+|+++                                     |+|++|+.++++ . ++++ |+
T Consensus        71 ~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~-~~~l-P~  148 (361)
T cd08231          71 GGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA-IVRV-PD  148 (361)
T ss_pred             CCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCc-eEEC-CC
Confidence            56665      9999999875                                     789999999986 6 9999 99


Q ss_pred             CCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCe
Q 037444          122 DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDD  200 (339)
Q Consensus       122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~  200 (339)
                      +++.. +++.++++++|||+++.+...+++|++|||+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++|+++
T Consensus       149 ~~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~  225 (361)
T cd08231         149 NVPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADA  225 (361)
T ss_pred             CCCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCe
Confidence            85544 56677799999999997777777999999997 59999999999999999 9999999999999888 899998


Q ss_pred             eeeCCChhh---HHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccc
Q 037444          201 AFNYKEEPD---LDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRI  275 (339)
Q Consensus       201 v~~~~~~~~---~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  275 (339)
                      +++++.. +   +...+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.....    .........++.+++
T Consensus       226 vi~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~  300 (361)
T cd08231         226 TIDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNL  300 (361)
T ss_pred             EEcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhccc
Confidence            8877653 3   33578888877 89999999986 5788999999999999999875421    111233445678888


Q ss_pred             cccceecccccchhHHHHHHHHHHHHcC--C--ceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          276 RLEGFLAGDYYHLYPKFLELVIPAIREG--K--MVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       276 ~~~~~~~~~~~~~~~~~l~~~~~~l~~g--~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++.++....     .+.++++++++.++  .  +...+..+|+++++++|++.+.++.. +|+++++
T Consensus       301 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         301 TIIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             EEEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            888876544     44577788888776  3  33456778999999999999988764 7999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.7e-37  Score=284.92  Aligned_cols=313  Identities=19%  Similarity=0.213  Sum_probs=250.2

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC---------CCCCCC
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP---------SFVDSF   76 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~---------~~~~p~   76 (339)
                      .|.+|||+++.....|.|. +.+.+  .++|.| ++++ +||+|||.++++|.+|++...+....         ...++.
T Consensus         9 ~~~~~~a~~~~~~~~g~~~-~~~~~--~~~~~p-~l~~-~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~   83 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPA-QAIQL--EDVPVP-ELGP-GEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH   83 (393)
T ss_pred             CchhhhheeeecccCCCcc-cceEE--eecCCC-CCCC-CEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence            4678999998643225452 33445  445656 4577 99999999999999999877663110         012335


Q ss_pred             CCCCeeEEe-----eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccC
Q 037444           77 HPGELKFWI-----LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQH  120 (339)
Q Consensus        77 ~~G~e~~G~-----~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p  120 (339)
                      ++|||++|+     ++++.+++||+|+++                               |+|++|+.+++.. ++++ |
T Consensus        84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~-l~~i-P  161 (393)
T cd08246          84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQ-LMPK-P  161 (393)
T ss_pred             ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHH-eEEC-C
Confidence            899999999     678889999999874                               7899999999998 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          121 TDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       121 ~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      ++++.. +++.+++++.+||+++...  +++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.++ ++|+
T Consensus       162 ~~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~  239 (393)
T cd08246         162 KHLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGA  239 (393)
T ss_pred             CCCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCC
Confidence            996554 5778999999999998655  67899999999999999999999999999999999999999999998 8999


Q ss_pred             CeeeeCCCh---------------------hhHHHHHHHhCCC--CccEEEECCChhhHHHHHHhhccCCEEEEEecccc
Q 037444          199 DDAFNYKEE---------------------PDLDAALKRCFPQ--GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       199 ~~v~~~~~~---------------------~~~~~~v~~~~~g--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ++++++++.                     ..+.+.+.+++++  ++|++|||+|+..+..++++++++|+++.+|....
T Consensus       240 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  319 (393)
T cd08246         240 EGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTG  319 (393)
T ss_pred             CEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCC
Confidence            988886431                     0245667777765  79999999998889999999999999999987543


Q ss_pred             cCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcC-CccceE
Q 037444          256 YNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTG-RNVGKQ  334 (339)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkv  334 (339)
                      ..     .......++.++.++.+.....     .+.+.+++++++++.+.+.+..+++++++++|++.+.++ +..||+
T Consensus       320 ~~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkv  389 (393)
T cd08246         320 YN-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNM  389 (393)
T ss_pred             CC-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceE
Confidence            21     1234455566777777765544     456888999999999987777789999999999999998 788898


Q ss_pred             EEE
Q 037444          335 LVA  337 (339)
Q Consensus       335 vv~  337 (339)
                      ++-
T Consensus       390 vv~  392 (393)
T cd08246         390 AVL  392 (393)
T ss_pred             EEe
Confidence            863

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.7e-37  Score=277.63  Aligned_cols=296  Identities=21%  Similarity=0.241  Sum_probs=246.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+    ++++  ++|.|. +++ +||+||+.++++|++|+..+.|.... ..+|.++|||++|+    
T Consensus         1 m~a~~~~~~--~~~----~~~~--~~~~p~-~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~v   69 (333)
T cd08296           1 YKAVQVTEP--GGP----LELV--ERDVPL-PGP-GEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAV   69 (333)
T ss_pred             CeEEEEccC--CCC----ceEE--eccCCC-CCC-CEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEE
Confidence            689999764  332    4554  466663 477 99999999999999999988775432 34578999999999    


Q ss_pred             -eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.+++||+|++                               .|++++|+.++++. ++++ |++++.. +++.++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~-~~~l-p~~~~~~-~aa~l~  146 (333)
T cd08296          70 GEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEA-LARI-PDDLDAA-EAAPLL  146 (333)
T ss_pred             CCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhh-eEeC-CCCCCHH-Hhhhhh
Confidence             67778999999985                               26899999999988 9999 9995554 577899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      .++.+||+++.. .+++++++|||+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++... ++.+.
T Consensus       147 ~~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~  222 (333)
T cd08296         147 CAGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVAEA  222 (333)
T ss_pred             hhhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHHHH
Confidence            999999999955 5899999999999 799999999999999999999999999999998 8999999988876 77777


Q ss_pred             HHHhCCCCccEEEECCC-hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          214 LKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                      ++..  +++|++||+.| +..+..++++++++|+++.+|....      ..+.....++.+++++.++....     ...
T Consensus       223 ~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~  289 (333)
T cd08296         223 LQEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALD  289 (333)
T ss_pred             HHhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHH
Confidence            7765  36999999997 5688899999999999999987542      12334566778999998876544     566


Q ss_pred             HHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +..++++++++.+++.+ ..++++++.+|++.+.+++..||+|++
T Consensus       290 ~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         290 SEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            88888999999988765 468999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=5.1e-37  Score=274.89  Aligned_cols=310  Identities=22%  Similarity=0.244  Sum_probs=255.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~--   85 (339)
                      |||+++++.  +.+  ..+.+.  +.+.| .+.+ ++|+||+.++++|+.|+....|....  ...+|.++|+|++|+  
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~--~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~   72 (324)
T cd08244           1 MRAIRLHEF--GPP--EVLVPE--DVPDP-VPGP-GQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVD   72 (324)
T ss_pred             CeEEEEcCC--CCc--cceEEe--ccCCC-CCCC-CEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEE
Confidence            689999775  555  345554  44445 3577 99999999999999999888775421  223467899999999  


Q ss_pred             ---eCCCCCCCCCEEEec-----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           86 ---LHIQNYAKDDLVWGS-----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~-----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                         +++..+++||+|+++     |+|++|+.++.+. ++++ |++++.. +++++++.+.+|| ++....+++++++|+|
T Consensus        73 ~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI  148 (324)
T cd08244          73 AVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDS-LHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLTPGDVVLV  148 (324)
T ss_pred             EeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHH-eEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCCCCCEEEE
Confidence               667789999999984     7899999999998 9999 9996655 6778999999995 5557789999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHH
Q 037444          158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDA  236 (339)
Q Consensus       158 ~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~  236 (339)
                      +|++|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++.+. ++.+.+.+.+++ ++|+++||+|+.....
T Consensus       149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~  226 (324)
T cd08244         149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIGRA  226 (324)
T ss_pred             EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhHHH
Confidence            999999999999999999999999999999999997 8999888888776 788888888776 8999999999988899


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      ++++++.+|+++.+|.....+     ........+.+++++.++..... +....+.++++++++.++.+.+.+...+++
T Consensus       227 ~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  301 (324)
T cd08244         227 ALALLAPGGRFLTYGWASGEW-----TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPL  301 (324)
T ss_pred             HHHHhccCcEEEEEecCCCCC-----CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeH
Confidence            999999999999998754321     12333455788888887765443 334466788899999999998777778999


Q ss_pred             ccHHHHHHHhHcCCccceEEEEe
Q 037444          316 ENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++|++.+.+++..||+++++
T Consensus       302 ~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         302 ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.7e-37  Score=280.02  Aligned_cols=314  Identities=24%  Similarity=0.241  Sum_probs=253.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCC----CCCCCCCeeEEe
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFV----DSFHPGELKFWI   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~----~p~~~G~e~~G~   85 (339)
                      |||+++.+.  +.|. +.+.+++  .|.|.+..+ ++|+||+.++|+|+.|+..+.|.......    +|.++|||++|+
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~~~--~~~p~~~~~-~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~   74 (341)
T cd08290           1 AKALVYTEH--GEPK-EVLQLES--YEIPPPGPP-NEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGE   74 (341)
T ss_pred             CceEEEccC--CCch-hheEEee--cCCCCCCCC-CEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEE
Confidence            689999886  6652 3455554  555544345 89999999999999999988876532222    567899999999


Q ss_pred             -----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 -----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                           +++..|++||+|++.    |+|++|+.++++. ++++ |++++.. +++.+++.+.+||+++.....+++|++||
T Consensus        75 V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vl  151 (341)
T cd08290          75 VVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADD-LIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDWVI  151 (341)
T ss_pred             EEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHH-eEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence                 567789999999986    7899999999988 9999 9996555 68888999999999998778899999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhCCCeeeeCCCh--hhHHHHHHHhCCCCccEEEECCC
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKNKFGFDDAFNYKEE--PDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~----~~~~~~~~~~g~~~v~~~~~~--~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      |+|++|++|++++|+|+..|++|+++++++    ++.+.++ ++|+++++++...  .++.+.++..+.+++|++|||+|
T Consensus       152 I~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g  230 (341)
T cd08290         152 QNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVG  230 (341)
T ss_pred             EccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcC
Confidence            999999999999999999999999999876    6678887 8999998887641  04566677665558999999999


Q ss_pred             hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCc
Q 037444          231 GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKM  305 (339)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~  305 (339)
                      +..+..++++++++|+++.+|.....     ........++.+++++.+......     +......+.++++++.+|.+
T Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  305 (341)
T cd08290         231 GKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL  305 (341)
T ss_pred             cHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCc
Confidence            98888899999999999999864321     112334456788888888765432     22334568889999999999


Q ss_pred             eeeeeeee---CcccHHHHHHHhHcCCccceEEEEe
Q 037444          306 VYVEDIAE---GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       306 ~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .+....++   ++++++++++.+.++...||+|+++
T Consensus       306 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         306 KAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             cCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            87766667   9999999999999998899999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=5.5e-37  Score=275.31  Aligned_cols=316  Identities=31%  Similarity=0.478  Sum_probs=254.4

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +|||+++.+..++.+  +.+++++  .+.| .+.+ ++++|||.++++|+.|+....|.+.....+|.++|+|++|+   
T Consensus         1 ~~~~~~~~~~~~~~~--~~~~~~~--~~~~-~~~~-~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~   74 (329)
T cd08250           1 SFRKLVVHRLSPNFR--EATSIVD--VPVP-LPGP-GEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVA   74 (329)
T ss_pred             CceEEEeccCCCCcc--cCceEEe--cCCC-CCCC-CEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEE
Confidence            589999999733224  4455654  4555 3477 99999999999999999988776543345788999999999   


Q ss_pred             --eCCCCCCCCCEEEec--cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 --LHIQNYAKDDLVWGS--TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                        ++++.+++||+|+++  |+|++|+.++.+. ++++ |++  +. ++++++.++.+||+++.+..++++|++++|+|++
T Consensus        75 vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~-~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~  149 (329)
T cd08250          75 VGEGVTDFKVGDAVATMSFGAFAEYQVVPARH-AVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAA  149 (329)
T ss_pred             ECCCCCCCCCCCEEEEecCcceeEEEEechHH-eEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCc
Confidence              567789999999986  8999999999998 9999 987  44 6778999999999999887899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l  241 (339)
                      |.+|++++++|+..|++|+++++++++.+.++ ++|++.+++.... ++.+.+....++++|++||++|+..+..+++++
T Consensus       150 g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l  227 (329)
T cd08250         150 GGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNL  227 (329)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHh
Confidence            99999999999999999999999999999998 8999888887775 777777766545899999999998899999999


Q ss_pred             ccCCEEEEEecccccCCCCCc----cccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeee--eeeeCc
Q 037444          242 RLRGRIAVCGMISQYNLEKPE----GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVE--DIAEGL  315 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~--~~~~~l  315 (339)
                      +++|+++.+|...........    ........+.+++++.++....+.....+.+.++++++.++.+.+.+  ...+++
T Consensus       228 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  307 (329)
T cd08250         228 ALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL  307 (329)
T ss_pred             ccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCH
Confidence            999999999875432100000    00112345677888887765443223456788899999999988743  345799


Q ss_pred             ccHHHHHHHhHcCCccceEEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +++++|++.+.++...||++++
T Consensus       308 ~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         308 ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHHcCCCCceEEeC
Confidence            9999999999998888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=8.2e-38  Score=277.42  Aligned_cols=284  Identities=14%  Similarity=0.164  Sum_probs=216.8

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeC-hhhhhhhcCCCCCC--CCCCCCCCCeeEEe
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCD-PYMRWRMSKLDRPS--FVDSFHPGELKFWI   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~-~~d~~~~~~~~~~~--~~~p~~~G~e~~G~   85 (339)
                      ++||+++.+     |  +.+++++  .|.|. +++ +||+|||.++||| .+|++.+.|.+...  ..+|.++|||++|+
T Consensus         1 ~~ka~~~~~-----~--~~l~~~e--~~~p~-~~~-~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~   69 (308)
T TIGR01202         1 KTQAIVLSG-----P--NQIELRE--VTLTP-PSP-GDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGR   69 (308)
T ss_pred             CceEEEEeC-----C--CeEEEEE--ecCCC-CCC-CeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEE
Confidence            468888865     3  3455654  55563 477 9999999999996 69998888865321  24689999999999


Q ss_pred             -----eCCCCCCCCCEEEe------------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcC
Q 037444           86 -----LHIQNYAKDDLVWG------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCS  148 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~  148 (339)
                           +++ .|++||||+.            .|+|+||+.++++. ++++ |++++.  +++. ..++.|||+++.+ . 
T Consensus        70 V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~-~~~i-p~~~~~--~~a~-~~~~~~a~~~~~~-~-  141 (308)
T TIGR01202        70 VVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASR-VCRL-DPALGP--QGAL-LALAATARHAVAG-A-  141 (308)
T ss_pred             EEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHH-ceeC-CCCCCH--HHHh-hhHHHHHHHHHHh-c-
Confidence                 566 5999999985            48999999999998 9999 998543  4444 3457899999954 3 


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      ..++++++|+|+ |++|++++|+|+++|++ |+++..++++++.+. .   ..++++.+  +        .++++|+|||
T Consensus       142 ~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~---~~~i~~~~--~--------~~~g~Dvvid  206 (308)
T TIGR01202       142 EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-G---YEVLDPEK--D--------PRRDYRAIYD  206 (308)
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-h---ccccChhh--c--------cCCCCCEEEE
Confidence            346899999984 99999999999999997 555555666655544 3   34454322  1        1238999999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCce
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV  306 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~  306 (339)
                      |+|+. .+..++++++++|+++.+|.....      ...+...++.+++++.++....     .+.++++++++++|+++
T Consensus       207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~  275 (308)
T TIGR01202       207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGALS  275 (308)
T ss_pred             CCCCHHHHHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCCCC
Confidence            99985 789999999999999999975321      1234455677888887765443     56789999999999998


Q ss_pred             e--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          307 Y--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       307 ~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +  .++.+|+|+++++|++.+.++...+|++++
T Consensus       276 ~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       276 LDGLITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             hhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            6  367789999999999998877677899874

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=7.3e-37  Score=274.18  Aligned_cols=310  Identities=21%  Similarity=0.241  Sum_probs=238.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||+++.+.  |++  ..+.++  +.|.| .+.+ +||+||+.++++|++|.....+.......+|.++|||++|+   .
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~--~~~~p-~~~~-~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~   72 (326)
T cd08289           1 FQALVVEKD--EDD--VSVSVK--NLTLD-DLPE-GDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVES   72 (326)
T ss_pred             CeeEEEecc--CCc--ceeEEE--EccCC-CCCC-CeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEc
Confidence            689999887  655  344454  46666 4577 99999999999999998665432211224578999999999   4


Q ss_pred             CCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhc--C-CCCCCE
Q 037444           87 HIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVC--S-PKKGEY  154 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~--~-~~~g~~  154 (339)
                      ++..|++||+|++.         |+|++|+.++++. ++++ |++++.. +++.+++.+.+||+++....  . ...+++
T Consensus        73 ~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~  149 (326)
T cd08289          73 NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEW-VVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPEQGP  149 (326)
T ss_pred             CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHH-eEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCCCCE
Confidence            66779999999974         7999999999998 9999 9996555 67788999999999885432  2 345789


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      |+|+|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++.++  ...+.++...++++|++|||+|+..+
T Consensus       150 vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~--~~~~~~~~~~~~~~d~vld~~g~~~~  226 (326)
T cd08289         150 VLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREE--LQEESIKPLEKQRWAGAVDPVGGKTL  226 (326)
T ss_pred             EEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchh--HHHHHHHhhccCCcCEEEECCcHHHH
Confidence            999999999999999999999999999999999999998 899988888765  23455666654489999999999889


Q ss_pred             HHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ..++++++++|+++.+|.....+     .+.....++.+++++.++..... .....+.+..+...+..+.+...+..++
T Consensus       227 ~~~~~~l~~~G~~i~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (326)
T cd08289         227 AYLLSTLQYGGSVAVSGLTGGGE-----VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEI  301 (326)
T ss_pred             HHHHHHhhcCCEEEEEeecCCCC-----CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccceEe
Confidence            99999999999999998753211     12234556688888888754322 1112334444444444333334457788


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++++|++.+.+++..||+++++
T Consensus       302 ~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         302 TLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             eHHHHHHHHHHHhcCcccceEEEeC
Confidence            9999999999999999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=272.64  Aligned_cols=313  Identities=22%  Similarity=0.248  Sum_probs=254.7

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +|||+++.+.  +.+  ..+.+.+  .+.| ++.+ ++|+|||.++++|+.|.....+........|.++|+|++|+   
T Consensus         1 ~m~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~   72 (334)
T PTZ00354          1 MMRAVTLKGF--GGV--DVLKIGE--SPKP-APKR-NDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVED   72 (334)
T ss_pred             CcEEEEEEec--CCC--cceEEEe--CCCC-CCCC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEE
Confidence            5899999887  555  3455544  4444 4577 99999999999999999888775432233356899999999   


Q ss_pred             --eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444           86 --LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                        +++..+++||+|+++   |+|++|++++.+. ++++ |++++.. +++.+++++.+||+++.....+++|++|+|+|+
T Consensus        73 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga  149 (334)
T PTZ00354         73 VGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGH-VMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG  149 (334)
T ss_pred             eCCCCCCCCCCCEEEEecCCCceeeEEEecHHH-cEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence              677889999999986   7999999999988 9999 9995554 577899999999999988789999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh-HHHHHHHhCCC-CccEEEECCChhhHHHHH
Q 037444          161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD-LDAALKRCFPQ-GIDIYFENVGGKMLDAVL  238 (339)
Q Consensus       161 ~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~v~~~~~g-~~d~vid~~g~~~~~~~~  238 (339)
                      +|++|++++++|+.+|++++++++++++.+.++ ++|++++++.... + +.+.++..+.+ ++|++||++|+..+..++
T Consensus       150 ~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~  227 (334)
T PTZ00354        150 ASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETA  227 (334)
T ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHHHH
Confidence            999999999999999999888999999999998 8999888887765 4 77888888776 899999999988999999


Q ss_pred             HhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ++++++|+++.++...+.+    ........++.++.++.++.....     +....+.+++++++++++.+.+.+...+
T Consensus       228 ~~l~~~g~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  303 (334)
T PTZ00354        228 EVLAVDGKWIVYGFMGGAK----VEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTY  303 (334)
T ss_pred             HHhccCCeEEEEecCCCCc----ccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEE
Confidence            9999999999998643321    111344455666667777654432     1222355688899999999987777788


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++++++.+.+++..||+++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        304 PLEEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEec
Confidence            9999999999999888889999876

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=9.9e-37  Score=274.90  Aligned_cols=299  Identities=22%  Similarity=0.252  Sum_probs=245.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~--   85 (339)
                      |||+++++.  +++    +.+.  +.|.| ++.+ ++|+||+.++++|++|+....|.+.  ....+|.++|+|++|+  
T Consensus         1 ~ka~~~~~~--~~~----~~~~--~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~   70 (340)
T cd05284           1 MKAARLYEY--GKP----LRLE--DVPVP-EPGP-GQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVE   70 (340)
T ss_pred             CeeeEeccC--CCC----ceEE--eCCCC-CCCC-CeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEE
Confidence            589999876  544    3454  45555 3477 9999999999999999998877553  2344578999999999  


Q ss_pred             ---eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCcccccccc
Q 037444           86 ---LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l  132 (339)
                         +++.+|++||+|+++                              |+|++|+.++++. ++++ |++++.. +++.+
T Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-P~~ls~~-~aa~l  147 (340)
T cd05284          71 EVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRR-LVKL-PRGLDPV-EAAPL  147 (340)
T ss_pred             EeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHH-eEEC-CCCCCHH-Hhhhh
Confidence               677889999999864                              5899999999998 9999 9995544 68889


Q ss_pred             CchhhhHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          133 GMPGVTAYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       133 ~~~~~tA~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      +..+.|||+++.+. ..+.++++|||+|+ |++|++++++|+.+| ++|+++++++++.+.++ ++|++++++++.  .+
T Consensus       148 ~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~  223 (340)
T cd05284         148 ADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--DV  223 (340)
T ss_pred             cchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--cH
Confidence            99999999999776 46889999999995 679999999999999 79999999999999997 999999888876  47


Q ss_pred             HHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccch
Q 037444          211 DAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL  288 (339)
Q Consensus       211 ~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
                      .+++++.+.+ ++|+++|++|+ .....++++|+++|+++.+|..+.       ........+.+++++.++....    
T Consensus       224 ~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~----  292 (340)
T cd05284         224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-------GRLPTSDLVPTEISVIGSLWGT----  292 (340)
T ss_pred             HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-------CccCHHHhhhcceEEEEEeccc----
Confidence            7778887776 89999999996 688899999999999999986432       1122334456788877765443    


Q ss_pred             hHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          289 YPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       289 ~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                       .+.++++++++++|.+++.+ ..++++++++|++.+.+++..||+++.+
T Consensus       293 -~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         293 -RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             -HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence             56788899999999988644 4689999999999999998889999863

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=9.7e-37  Score=277.08  Aligned_cols=305  Identities=21%  Similarity=0.280  Sum_probs=247.6

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      |+|||+++.+.  +.+    +++++  .|.| ++++ +||+|||.++++|++|++...+.+.  ..+|.++|+|++|+  
T Consensus         1 ~~~~a~~~~~~--~~~----~~~~~--~~~p-~~~~-~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~   68 (365)
T cd08278           1 MKTTAAVVREP--GGP----FVLED--VELD-DPRP-DEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVE   68 (365)
T ss_pred             CccEEeeeccC--CCc----ceEEE--eecC-CCCC-CeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEE
Confidence            57899999875  444    45554  5545 4477 9999999999999999998887543  34578999999999  


Q ss_pred             ---eCCCCCCCCCEEEe----------------------------------------------------ccceeeEEEec
Q 037444           86 ---LHIQNYAKDDLVWG----------------------------------------------------STGWEEYSLVT  110 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~----------------------------------------------------~g~~~~~~~v~  110 (339)
                         ++++.|++||+|++                                                    .|+|++|+.++
T Consensus        69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~  148 (365)
T cd08278          69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH  148 (365)
T ss_pred             EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence               67788999999983                                                    26899999999


Q ss_pred             CccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 037444          111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKV  189 (339)
Q Consensus       111 ~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~  189 (339)
                      ++. ++++ |++++.. +++.+++++.+|++++.+...+++|++|||+| +|++|++++|+|+.+|+ +|+++++++++.
T Consensus       149 ~~~-~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~  224 (365)
T cd08278         149 ERN-VVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRL  224 (365)
T ss_pred             chh-EEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            998 9999 9996554 58889999999999998888999999999997 59999999999999999 688888899998


Q ss_pred             HHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchH
Q 037444          190 DLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE  268 (339)
Q Consensus       190 ~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  268 (339)
                      +.++ ++|+++++++... ++.+.+++.+++++|+++||+|+ ..+..++++++++|+++.+|.....    .....+..
T Consensus       225 ~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~  298 (365)
T cd08278         225 ELAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVN  298 (365)
T ss_pred             HHHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHH
Confidence            8888 8999999998876 78888888873399999999986 6789999999999999999864321    11233445


Q ss_pred             HHHhccccccceecccccchhHHHHHHHHHHHHcCCcee-eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          269 QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY-VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .++.+++++.++.....  ...+.+++++++++++.+.+ .+...++++++++|++.+.++... |++++
T Consensus       299 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         299 DLLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             HHhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            55578888877654332  11466788999999999865 344578999999999999887765 77764

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9e-37  Score=276.24  Aligned_cols=303  Identities=20%  Similarity=0.202  Sum_probs=245.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC-------------------C
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR-------------------P   70 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~-------------------~   70 (339)
                      |||+++.+.  +.+  +.+.+.+ +.+.| ++.+ ++|+|||.++++|++|+..+.|.+.                   .
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~-~~~~~-~~~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   73 (350)
T cd08274           1 MRAVLLTGH--GGL--DKLVYRD-DVPVP-TPAP-GEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGG   73 (350)
T ss_pred             CeEEEEecc--CCc--cceeecc-cCCCC-CCCC-CeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccC
Confidence            588888775  555  3344432 23444 3467 9999999999999999988876432                   1


Q ss_pred             CCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec----------------------cceeeEEEecCccceeeccCCCC
Q 037444           71 SFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS----------------------TGWEEYSLVTAPQLLIKIQHTDV  123 (339)
Q Consensus        71 ~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~----------------------g~~~~~~~v~~~~~~~~i~p~~~  123 (339)
                      ...+|.++|||++|+     ++++.|++||+|++.                      |+|++|+.++.+. ++++ |+++
T Consensus        74 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~  151 (350)
T cd08274          74 TLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAEN-AYPV-NSPL  151 (350)
T ss_pred             CCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHH-ceeC-CCCC
Confidence            234578999999999     678889999999872                      7899999999998 9999 9996


Q ss_pred             CccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeee
Q 037444          124 PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFN  203 (339)
Q Consensus       124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~  203 (339)
                      +.. +++++++++.+||+++ ...++++|++|||+|++|++|++++++|+.+|++|+++++++ +.+.++ ++|++.+++
T Consensus       152 ~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~  227 (350)
T cd08274         152 SDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVIL  227 (350)
T ss_pred             CHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEe
Confidence            655 6888999999999998 778999999999999999999999999999999999998765 778887 899876666


Q ss_pred             CCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceec
Q 037444          204 YKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLA  282 (339)
Q Consensus       204 ~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (339)
                      .... ...+  ...+.+ ++|++||++|+..+..++++++++|+++.+|.....     ....+...++.+++++.++..
T Consensus       228 ~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~  299 (350)
T cd08274         228 RDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLYLKDLTLFGSTL  299 (350)
T ss_pred             CCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-----cccCCHHHhhhcceEEEEeec
Confidence            5543 4433  444555 899999999998899999999999999999864221     123345566778888887766


Q ss_pred             ccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          283 GDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       283 ~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ..     .+.++++++++.++.+++.+...+++++++++++.+.++...||+++++
T Consensus       300 ~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         300 GT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             CC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            44     6778999999999999877777889999999999999888889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=9.7e-37  Score=274.52  Aligned_cols=305  Identities=15%  Similarity=0.171  Sum_probs=241.3

Q ss_pred             ceEEEeecc-CCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           11 KRVILSNYV-TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        11 ~a~~~~~~~-~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||+++.+.. -+.|  +  .++..+.|.| ++++ +||+|||.++++|+.|+..+.+... ...+|.++|+|++|+    
T Consensus         1 ~~~~~~~~~~~~~~--~--~~~~~~~~~p-~~~~-~ev~Ikv~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~V~~v   73 (336)
T TIGR02817         1 KAVGYKKPLPITDP--D--ALVDIDLPKP-KPGG-RDLLVEVKAISVNPVDTKVRARMAP-EAGQPKILGWDAAGVVVAV   73 (336)
T ss_pred             CceeeccccCCCCc--c--cceecccCCC-CCCC-CEEEEEEEEEEcChHHHHHHcCCCC-CCCCCcccceeeEEEEEEe
Confidence            577777730 1334  3  4445567777 4578 9999999999999999988877543 234577899999999    


Q ss_pred             -eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCC-----CC
Q 037444           86 -LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKK-----GE  153 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~-----g~  153 (339)
                       ++++.|++||+|+++      |+|++|+.++++. ++++ |++++.. +++.+++++.+||+++....++++     |+
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~  150 (336)
T TIGR02817        74 GDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERI-VGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKR  150 (336)
T ss_pred             CCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHH-cccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence             678889999999985      6899999999998 9999 9996554 688899999999999988888887     99


Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC-h
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG-G  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g-~  231 (339)
                      +|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++..  ++.+.+++..++++|+++|+++ +
T Consensus       151 ~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~  227 (336)
T TIGR02817       151 ALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTD  227 (336)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcH
Confidence            9999999999999999999998 999999999999999998 899999998654  6777788754448999999986 4


Q ss_pred             hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc--c-c--cchh--HHHHHHHHHHHHcCC
Q 037444          232 KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG--D-Y--YHLY--PKFLELVIPAIREGK  304 (339)
Q Consensus       232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~--~~~l~~~~~~l~~g~  304 (339)
                      .....++++++++|+++.++...         ......+..+++++.+....  . +  +...  ...++++++++.++.
T Consensus       228 ~~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  298 (336)
T TIGR02817       228 QHFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGK  298 (336)
T ss_pred             HHHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCC
Confidence            78889999999999999874321         12233344455655543322  1 1  1111  256889999999999


Q ss_pred             ceeeeeeee---CcccHHHHHHHhHcCCccceEEEE
Q 037444          305 MVYVEDIAE---GLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       305 ~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +++.+...+   +++++++|++.+.+++..||++++
T Consensus       299 l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       299 IRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             eeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            987655555   478999999999999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.6e-36  Score=271.74  Aligned_cols=309  Identities=20%  Similarity=0.241  Sum_probs=242.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||++++++  +++  +.+++++  .|.| .+++ ++|+||+.++++|++|+..+.|.......+|.++|||++|+   -
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~p-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~   72 (325)
T cd05280           1 FKALVVEEQ--DGG--VSLFLRT--LPLD-DLPE-GDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS   72 (325)
T ss_pred             CceEEEccc--CCC--CcceEEe--CCCC-CCCC-CeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe
Confidence            689999987  654  3455644  5555 4577 99999999999999999988886543334577899999999   4


Q ss_pred             CCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcC--CC-CCCE
Q 037444           87 HIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCS--PK-KGEY  154 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~--~~-~g~~  154 (339)
                      +++.|++||+|++.         |+|++|+.++++. ++++ |++++.. +++.+++.+.+||+++.....  ++ .+++
T Consensus        73 ~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~  149 (325)
T cd05280          73 DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADW-VVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPEDGP  149 (325)
T ss_pred             CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhh-EEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCCCCE
Confidence            55678999999984         7899999999998 9999 9996655 688899999999999866543  35 4579


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      |+|+|++|++|++++++|+.+|++|+++++++++.+.++ ++|++++++....  .....+....+++|++||++|+..+
T Consensus       150 vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~  226 (325)
T cd05280         150 VLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVL  226 (325)
T ss_pred             EEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHH
Confidence            999999999999999999999999999999999999998 8999988876542  1222333333489999999999999


Q ss_pred             HHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc-chhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ..++++++++|+++.+|.....+     .......++.+++++.+....... ....+.++.+.+++..+.. ..+..++
T Consensus       227 ~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  300 (325)
T cd05280         227 ANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL-EIVVREI  300 (325)
T ss_pred             HHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc-cceeeEe
Confidence            99999999999999998754321     122334445788888887654432 2334566777777777744 4467789


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++++++.+.+++..||+|+++
T Consensus       301 ~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         301 SLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             cHHHHHHHHHHHhcCCcceEEEEeC
Confidence            9999999999999999999999874

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.3e-36  Score=272.78  Aligned_cols=304  Identities=22%  Similarity=0.183  Sum_probs=237.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCC-CCCCeeEEe---
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSF-HPGELKFWI---   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~-~~G~e~~G~---   85 (339)
                      |++++++..  +.-    ..+  .+.+.| .+.+ ++|+|||.++|||.+|++.+.+..+. ..++. ++|||++|+   
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~p-~~~p-~~vlVkv~~~gICGSDlh~~~g~~~~-~~~~~~i~GHE~~G~V~e   69 (350)
T COG1063           1 MKAAVVYVG--GGD----VRL--EEPPPP-IPGP-GDVLIRVTATGICGSDLHIYRGGEPF-VPPGDIILGHEFVGEVVE   69 (350)
T ss_pred             CceeEEEec--CCc----ccc--ccCCCC-CCCC-CeEEEEEEEEeEchhhhhhccCCCCC-CCCCCcccCccceEEEEE
Confidence            466666664  211    123  334434 3477 99999999999999999999996543 23334 999999998   


Q ss_pred             eC-CCCCCCCCEEEec-----------------------------------cceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 LH-IQNYAKDDLVWGS-----------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 ~~-v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                      -+ ++.+++||||...                                   |+|+||+.++.+..+.++ |+++  +.++
T Consensus        70 vG~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~-pd~~--~~~~  146 (350)
T COG1063          70 VGVVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKL-PDGI--DEEA  146 (350)
T ss_pred             eccccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecC-CCCC--Chhh
Confidence            33 3469999999752                                   578999999986635556 7874  5479


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP  208 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~  208 (339)
                      +++..++.+++++........++++|+|+|+ |++|++++++|+.+|+ +|+++..++++++++++..|++.+++.... 
T Consensus       147 aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-  224 (350)
T COG1063         147 AALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-  224 (350)
T ss_pred             hhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-
Confidence            9999999999887545556666779999996 9999999999999998 888889999999999933667766666654 


Q ss_pred             hHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc
Q 037444          209 DLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY  286 (339)
Q Consensus       209 ~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
                      +....+.+.+.| ++|++|||+|. ..+.+++++++++|+++.+|......     .......++.|++++.|+....  
T Consensus       225 ~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~~~--  297 (350)
T COG1063         225 DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLRPS--  297 (350)
T ss_pred             cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccCCC--
Confidence            677888888988 99999999996 47899999999999999999865431     0345778899999999984422  


Q ss_pred             chhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCc-cceEEEEe
Q 037444          287 HLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRN-VGKQLVAV  338 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~  338 (339)
                        ....++.+++++++|++.+.  ++..++++++++|++.+.++.. .-|+++++
T Consensus       298 --~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         298 --GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             --CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence              14568999999999999975  4455689999999999998654 45888763

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2.7e-36  Score=270.86  Aligned_cols=321  Identities=45%  Similarity=0.699  Sum_probs=253.6

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe-
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI-   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~-   85 (339)
                      ++|||+++..+++.|.++.++++.  .|.| ++++ ++|+|||.++++|++|+....+....  ....+.++|+|++|+ 
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-~~~~-~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   76 (329)
T cd05288           1 SNRQVVLAKRPEGPPPPDDFELVE--VPLP-ELKD-GEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV   76 (329)
T ss_pred             CCcEEEEeccCCCCCCccceeEEe--ccCC-CCCC-CeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEE
Confidence            468999999866656667777765  4445 3577 99999999999999887655543211  111245789999999 


Q ss_pred             --eCCCCCCCCCEEEeccceeeEEEecC-ccceeeccCCCCCccc-cccc-cCchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444           86 --LHIQNYAKDDLVWGSTGWEEYSLVTA-PQLLIKIQHTDVPLSY-YTGI-LGMPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~g~~~~~~~v~~-~~~~~~i~p~~~~~~~-~aa~-l~~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                        .+...|++||+|+++++|++|+.+++ +. ++++ |++++.++ ++++ +++++.+||+++.....+.++++|||+|+
T Consensus        77 ~~~G~~~~~~Gd~V~~~~~~~~~~~v~~~~~-~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~  154 (329)
T cd05288          77 VESRSPDFKVGDLVSGFLGWQEYAVVDGASG-LRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAA  154 (329)
T ss_pred             EecCCCCCCCCCEEecccceEEEEEecchhh-cEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecC
Confidence              33346999999999999999999999 88 9999 99863122 4444 99999999999988788999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHh
Q 037444          161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLN  240 (339)
Q Consensus       161 ~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~  240 (339)
                      +|++|++++++|+..|++|+++++++++.+.+++.+|+++++++++. ++.+.+.+.+++++|++|||+|+..+..++++
T Consensus       155 ~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~  233 (329)
T cd05288         155 AGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAALTL  233 (329)
T ss_pred             cchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHHHHHh
Confidence            99999999999999999999999999999999833999999998876 78888888775589999999999899999999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHH
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPA  320 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~  320 (339)
                      ++++|+++.+|...................+.+++++.++..........+.+.++++++.+|.+++.....++++++++
T Consensus       234 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~  313 (329)
T cd05288         234 LNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPE  313 (329)
T ss_pred             cCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHH
Confidence            99999999998754321100000123445567888887766544332334678889999999999876666789999999


Q ss_pred             HHHHhHcCCccceEEE
Q 037444          321 ALVGLFTGRNVGKQLV  336 (339)
Q Consensus       321 a~~~~~~~~~~gkvvv  336 (339)
                      +++.+.+++..||+++
T Consensus       314 a~~~~~~~~~~gkvvv  329 (329)
T cd05288         314 AFLGLFTGKNTGKLVV  329 (329)
T ss_pred             HHHHHhcCCCccceeC
Confidence            9999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=2.6e-36  Score=270.22  Aligned_cols=307  Identities=21%  Similarity=0.244  Sum_probs=243.6

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---eC
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---LH   87 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~~   87 (339)
                      ||+++.+.  +.|  +.+++  .++|.| .+++ ++|+||+.++++|++|+..+.|.+.....+|.++|||++|+   ++
T Consensus         1 ~a~~~~~~--~~~--~~~~~--~~~~~p-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~~~   72 (323)
T TIGR02823         1 KALVVEKE--DGK--VSAQV--ETLDLS-DLPE-GDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVSSE   72 (323)
T ss_pred             CeEEEccC--CCC--cceeE--eecCCC-CCCC-CeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEecC
Confidence            67888876  666  33444  556667 4577 99999999999999999888886543234578899999999   56


Q ss_pred             CCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHh--cCCCCCC-EE
Q 037444           88 IQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGE-YV  155 (339)
Q Consensus        88 v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~g~-~v  155 (339)
                      +..|++||+|+++         |+|++|+.++++. ++++ |++++.. +++.++..+.+|++++...  ..+.+|+ +|
T Consensus        73 ~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~v  149 (323)
T TIGR02823        73 DPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADW-LVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPEDGPV  149 (323)
T ss_pred             CCCCCCCCEEEEccCCCCCCCCccceEEEEEchhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCCceE
Confidence            7789999999975         6899999999998 9999 9995554 5778899999999887543  3488998 99


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHH
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLD  235 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~  235 (339)
                      +|+|++|.+|++++++|+.+|++|+++++++++.+.++ ++|++++++..+. +.  .++....+++|+++||+|+..+.
T Consensus       150 lI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~~~~~  225 (323)
T TIGR02823       150 LVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGGHTLA  225 (323)
T ss_pred             EEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccHHHHH
Confidence            99999999999999999999999999998999889997 8999888876543 32  45555555799999999998889


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeC
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEG  314 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~  314 (339)
                      .++++++++|+++.+|.....     ........++.+++++.+...... .......+..+.+++..+.+... ...++
T Consensus       226 ~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  299 (323)
T TIGR02823       226 NVLAQLKYGGAVAACGLAGGP-----DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TREIT  299 (323)
T ss_pred             HHHHHhCCCCEEEEEcccCCC-----CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eeeec
Confidence            999999999999999875321     111233445578888887654322 22234456777888888887654 44789


Q ss_pred             cccHHHHHHHhHcCCccceEEEEe
Q 037444          315 LENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       315 l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++|++.+.+++..||+++++
T Consensus       300 l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       300 LEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             HHHHHHHHHHHhCCCccceEEEeC
Confidence            999999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=2.3e-36  Score=277.66  Aligned_cols=313  Identities=18%  Similarity=0.207  Sum_probs=250.4

Q ss_pred             cccccceEEEee--ccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC---------CCCC
Q 037444            6 EAVSNKRVILSN--YVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP---------SFVD   74 (339)
Q Consensus         6 ~~~~~~a~~~~~--~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~---------~~~~   74 (339)
                      ++.+|||+++..  +  ++|. +.+.+.  ++|.|. +++ ++|+||+.++++|++|.+...+....         ....
T Consensus         4 ~~~~~~a~~~~~~~~--~~~~-~~~~~~--~~~~p~-l~~-~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T TIGR01751         4 VPETMYAFAIREERD--GDPR-QAIQLE--VVPVPE-LGP-GEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDL   76 (398)
T ss_pred             cchhhhheEEecccC--CCcc-cceEEe--ecCCCC-CCC-CeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCC
Confidence            567899999965  5  6663 445564  456663 477 99999999999999998766543210         0012


Q ss_pred             C-CCCCCeeEEe-----eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceee
Q 037444           75 S-FHPGELKFWI-----LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIK  117 (339)
Q Consensus        75 p-~~~G~e~~G~-----~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~  117 (339)
                      | .++|||++|+     ++++.+++||+|++.                               |+|++|+.++++. +++
T Consensus        77 ~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~-~~~  155 (398)
T TIGR01751        77 PFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQ-LMP  155 (398)
T ss_pred             CceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHH-eEE
Confidence            3 3799999999     677889999999863                               7899999999988 999


Q ss_pred             ccCCCCCccccccccCchhhhHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 037444          118 IQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK  195 (339)
Q Consensus       118 i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~  195 (339)
                      + |++++.. +++.++..+.+||+++..  ..++++|++|+|+|++|++|++++++|+.+|++++++++++++.+.++ +
T Consensus       156 v-P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~  232 (398)
T TIGR01751       156 K-PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-E  232 (398)
T ss_pred             C-CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-H
Confidence            9 9996554 577889999999999865  477899999999999999999999999999999999998999999998 7


Q ss_pred             hCCCeeeeCCCh---------------------hhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          196 FGFDDAFNYKEE---------------------PDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       196 ~g~~~v~~~~~~---------------------~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +|++.++|++..                     ..+.+.+.+.+.+ ++|++|||+|...+..++++++++|+++.+|..
T Consensus       233 ~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~  312 (398)
T TIGR01751       233 LGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGT  312 (398)
T ss_pred             cCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccc
Confidence            999999986542                     0244566777776 899999999988899999999999999999875


Q ss_pred             cccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccce
Q 037444          254 SQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGK  333 (339)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gk  333 (339)
                      ...+     .......++.++.++.+.....     .+.+++++++++++.+.+.+..++++++++++++.+.+++..||
T Consensus       313 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk  382 (398)
T TIGR01751       313 TGYN-----HDYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGN  382 (398)
T ss_pred             cCCC-----CCcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCce
Confidence            4321     1223444556666666665444     34578899999999998777788999999999999999999999


Q ss_pred             EEEEeC
Q 037444          334 QLVAVA  339 (339)
Q Consensus       334 vvv~~~  339 (339)
                      +|+++.
T Consensus       383 vvv~~~  388 (398)
T TIGR01751       383 VAVLVL  388 (398)
T ss_pred             EEEEeC
Confidence            999863

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-36  Score=270.08  Aligned_cols=303  Identities=20%  Similarity=0.192  Sum_probs=250.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  + +  ..+++  .+.|.|. +.+ ++++||+.++++|+.|+..+.+........+.++|+|++|+    
T Consensus         1 m~a~~~~~~--~-~--~~~~~--~~~~~~~-~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~v   71 (341)
T cd08297           1 MKAAVVEEF--G-E--KPYEV--KDVPVPE-PGP-GEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAV   71 (341)
T ss_pred             CceEEeecc--C-C--CCceE--EEeeCCC-CCC-CeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEe
Confidence            689999876  4 2  34455  4456663 577 99999999999999999888775542233466899999999    


Q ss_pred             -eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.+++||+|++                               .|+|++|+.++++. ++++ |++++.. +++.++
T Consensus        72 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~-~~~l-p~~~~~~-~~a~l~  148 (341)
T cd08297          72 GPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARY-VTPI-PDGLSFE-QAAPLL  148 (341)
T ss_pred             CCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEecccc-EEEC-CCCCCHH-HHHHHH
Confidence             67778999999986                               36899999999998 9999 9995554 577899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      ..+.+||+++.. .+++++++|||+|+++.+|++++++|+.+|++|+++++++++.+.++ ++|+++++++... ++.+.
T Consensus       149 ~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~  225 (341)
T cd08297         149 CAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDVEA  225 (341)
T ss_pred             cchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHH
Confidence            999999999866 58999999999999888999999999999999999999999999887 8999999998876 78888


Q ss_pred             HHHhCCC-CccEEEECCC-hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHH
Q 037444          214 LKRCFPQ-GIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK  291 (339)
Q Consensus       214 v~~~~~g-~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
                      +.+.+++ ++|++||+.+ ...+..++++++++|+++.+|..+..     ........+..+++++.+.....     .+
T Consensus       226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~  295 (341)
T cd08297         226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT-----RQ  295 (341)
T ss_pred             HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC-----HH
Confidence            8888766 8999999776 46888999999999999999864421     11233455567788877754433     57


Q ss_pred             HHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       292 ~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .+++++++++++.+.+.+ ..+++++++++++.+.++...||+++++
T Consensus       296 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         296 DLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            789999999999997644 5689999999999999999899999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-36  Score=274.13  Aligned_cols=302  Identities=23%  Similarity=0.257  Sum_probs=248.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+    +.+.  +.|.| ++.+ +||+||+.++++|++|+....+...  ..+|.++|||++|+    
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~~-~~~~-~~v~v~v~~~~l~~~d~~~~~~~~~--~~~p~~~g~e~~G~v~~v   68 (367)
T cd08263           1 MKAAVLKGP--NPP----LTIE--EIPVP-RPKE-GEILIRVAACGVCHSDLHVLKGELP--FPPPFVLGHEISGEVVEV   68 (367)
T ss_pred             CeeEEEecC--CCC----cEEE--EeeCC-CCCC-CeEEEEEEEeeeCcchHHHhcCCCC--CCCCcccccccceEEEEe
Confidence            689999876  433    4554  45556 4477 9999999999999999998877553  25578999999999    


Q ss_pred             -eCCCC---CCCCCEEEe----------------------------------------------------ccceeeEEEe
Q 037444           86 -LHIQN---YAKDDLVWG----------------------------------------------------STGWEEYSLV  109 (339)
Q Consensus        86 -~~v~~---~~~Gd~V~~----------------------------------------------------~g~~~~~~~v  109 (339)
                       +++..   |++||+|++                                                    .|+|++|+.+
T Consensus        69 G~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  148 (367)
T cd08263          69 GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVV  148 (367)
T ss_pred             CCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEe
Confidence             56666   999999987                                                    2688999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEK  188 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~  188 (339)
                      +.+. ++++ |++++.. ++++++.++++||+++.+...++++++|+|+| +|++|++++++|+.+|++ |++++.++++
T Consensus       149 ~~~~-~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~  224 (367)
T cd08263         149 PATA-LAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEK  224 (367)
T ss_pred             chhh-EEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHH
Confidence            9998 9999 9996655 68899999999999998888889999999996 699999999999999997 9999889999


Q ss_pred             HHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccc
Q 037444          189 VDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN  266 (339)
Q Consensus       189 ~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  266 (339)
                      .+.++ ++|++++++++.. ++.+.++..+++ ++|++||++++. ....++++++++|+++.++.....    ......
T Consensus       225 ~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~  298 (367)
T cd08263         225 LAKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIP  298 (367)
T ss_pred             HHHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccC
Confidence            89887 8999999998876 888888887766 899999999987 889999999999999999864321    112233


Q ss_pred             hHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      ...++.+++++.++....    ..+.+++++++++++.+++.  +...++++++.++++.+.+++..||+||.
T Consensus       299 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         299 ITRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            444556787776643222    14678899999999998864  55678999999999999999888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=2.7e-36  Score=270.11  Aligned_cols=303  Identities=22%  Similarity=0.267  Sum_probs=250.8

Q ss_pred             CCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCC
Q 037444           21 GFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDD   95 (339)
Q Consensus        21 ~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd   95 (339)
                      +.|.++++.++.  .|.| ++.+ ++|+|||.++++|+.|...+.+........|.++|+|++|+     ++++.+++||
T Consensus         7 ~~~~~~~~~~~~--~~~~-~~~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   82 (323)
T cd05282           7 GEPLPLVLELVS--LPIP-PPGP-GEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQ   82 (323)
T ss_pred             CCCccceEEeEe--CCCC-CCCC-CeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCC
Confidence            555334556655  4555 3477 99999999999999999888775533334567999999999     6788899999


Q ss_pred             EEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 037444           96 LVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFA  172 (339)
Q Consensus        96 ~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la  172 (339)
                      +|+++   |+|++|+.++... ++++ |++++.. +++.+++.+.+||+++.....+.+|++|+|+|++|.+|++++++|
T Consensus        83 ~V~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a  159 (323)
T cd05282          83 RVLPLGGEGTWQEYVVAPADD-LIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLA  159 (323)
T ss_pred             EEEEeCCCCcceeEEecCHHH-eEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHH
Confidence            99995   7899999999988 9999 9985554 577888999999999988888999999999999999999999999


Q ss_pred             HHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEe
Q 037444          173 KLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       173 ~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +.+|++|+++++++++.+.++ ++|+++++++... ++.+.+++.+.+ ++|++|||+|+......+++++++|+++.+|
T Consensus       160 ~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g  237 (323)
T cd05282         160 KLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYG  237 (323)
T ss_pred             HHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEc
Confidence            999999999999999999998 8999999988876 788888888877 9999999999988889999999999999998


Q ss_pred             cccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhH
Q 037444          252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLF  326 (339)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~  326 (339)
                      .....     ........+..+++++.++....+     +....+.++++++++.++.+.+.+...++++++++|++.+.
T Consensus       238 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~  312 (323)
T cd05282         238 LLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAE  312 (323)
T ss_pred             cCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHh
Confidence            75432     112233444448888888776543     23445678889999999999877677889999999999999


Q ss_pred             cCCccceEEEE
Q 037444          327 TGRNVGKQLVA  337 (339)
Q Consensus       327 ~~~~~gkvvv~  337 (339)
                      +++..||++++
T Consensus       313 ~~~~~~kvv~~  323 (323)
T cd05282         313 QPGRGGKVLLT  323 (323)
T ss_pred             cCCCCceEeeC
Confidence            88888899874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.4e-36  Score=269.73  Aligned_cols=303  Identities=19%  Similarity=0.238  Sum_probs=249.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.++  +.|    +.+  .+.|.|. +.+ ++|+||+.++++|+.|+....|.... ..+|.++|+|++|+    
T Consensus         1 m~a~~~~~~--~~~----~~~--~~~~~~~-~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~   69 (345)
T cd08260           1 MRAAVYEEF--GEP----LEI--REVPDPE-PPP-DGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEV   69 (345)
T ss_pred             CeeEEEecC--CCC----cEE--EEccCCC-CCC-CeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEE
Confidence            699999876  544    345  4456663 477 99999999999999999888886542 24478899999999    


Q ss_pred             -eCCCCCCCCCEEEe------------------------------ccceeeEEEecCc--cceeeccCCCCCcccccccc
Q 037444           86 -LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAP--QLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~~~aa~l  132 (339)
                       ++++.|++||+|++                              .|+|++|+.+++.  . ++++ |++++.. +++.+
T Consensus        70 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~i-P~~~~~~-~aa~l  146 (345)
T cd08260          70 GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVN-LVRL-PDDVDFV-TAAGL  146 (345)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCc-eEEC-CCCCCHH-Hhhhh
Confidence             57788999999986                              3789999999974  6 9999 9996654 57788


Q ss_pred             CchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-hhhHH
Q 037444          133 GMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLD  211 (339)
Q Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~  211 (339)
                      +.++.+||+++...+++.++++|+|+| +|++|++++++|+..|++|+++++++++.+.++ ++|++++++++. . ++.
T Consensus       147 ~~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~  223 (345)
T cd08260         147 GCRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-DVA  223 (345)
T ss_pred             ccchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-hHH
Confidence            999999999998888899999999999 699999999999999999999999999999998 899999998886 5 788


Q ss_pred             HHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          212 AALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      +.++.+..+++|++|||+|+ ..+..++++++++|+++.+|.......   ........++.+++++.+.....     .
T Consensus       224 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~  295 (345)
T cd08260         224 AAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSHGMP-----A  295 (345)
T ss_pred             HHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCCcCC-----H
Confidence            88887766689999999995 688899999999999999987543210   01223444557778777765533     5


Q ss_pred             HHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          291 KFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      ..+++++++++++.+.+.  +...++++++++|++.+.+++..||+|++
T Consensus       296 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         296 HRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            678889999999998764  56678999999999999999999998875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=6e-36  Score=268.36  Aligned_cols=310  Identities=20%  Similarity=0.177  Sum_probs=247.5

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +||++++.+.  |.|  ..+++++  .|.| .+++ +||+|||.++|+|++|+....+.+.. ..+|.++|+|++|+   
T Consensus         1 ~~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~   71 (327)
T PRK10754          1 MAKRIEFHKH--GGP--EVLQAVE--FTPA-DPAE-NEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVSK   71 (327)
T ss_pred             CceEEEEecc--CCh--hHeEEee--ccCC-CCCC-CEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEEE
Confidence            4799999887  776  4555554  5556 4477 99999999999999999888775432 23577899999999   


Q ss_pred             --eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444           86 --LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                        ++++.+++||+|++.    |+|++|+.++.+. ++++ |++++.. +++.+++.+.+||+++.....+++|++|+|+|
T Consensus        72 vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g  148 (327)
T PRK10754         72 VGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADK-AAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHA  148 (327)
T ss_pred             eCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHH-ceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEe
Confidence              677889999999865    7899999999988 9999 9995554 57778889999999998878899999999999


Q ss_pred             CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHH
Q 037444          160 ASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVL  238 (339)
Q Consensus       160 a~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~  238 (339)
                      ++|.+|++++++|+.+|++|+++++++++.+.++ ++|++++++.... ++.+.+++.+++ ++|++|||+|+..+..++
T Consensus       149 ~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~  226 (327)
T PRK10754        149 AAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASL  226 (327)
T ss_pred             CCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHH
Confidence            9999999999999999999999999999999998 8999888988776 888889998887 899999999998889999


Q ss_pred             HhhccCCEEEEEecccccCCCCCccccchHHHHhcccc-ccceecccc---cchhHHHHHHHHHHHHcCCceee--eeee
Q 037444          239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIR-LEGFLAGDY---YHLYPKFLELVIPAIREGKMVYV--EDIA  312 (339)
Q Consensus       239 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~--~~~~  312 (339)
                      ++++++|+++.+|.....     ........+..++.. ........+   +......+.++++++.+|.+++.  ....
T Consensus       227 ~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~  301 (327)
T PRK10754        227 DCLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQK  301 (327)
T ss_pred             HHhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcE
Confidence            999999999999875421     011122222222211 111111111   22334557788999999999864  3567


Q ss_pred             eCcccHHHHHHHhHcCCccceEEEE
Q 037444          313 EGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       313 ~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      |++++++++++.+.+++..||+|+.
T Consensus       302 ~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        302 FPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             EcHHHHHHHHHHHHcCCCcceEEEe
Confidence            8999999999999999989999985

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=6.5e-36  Score=270.58  Aligned_cols=301  Identities=17%  Similarity=0.163  Sum_probs=245.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC-----------CCCCCCCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP-----------SFVDSFHP   78 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~-----------~~~~p~~~   78 (339)
                      |||+++...  +.+    +++.  +.|.| ++++ +||+||+.++++|++|++...+.++.           ...+|.++
T Consensus         1 ~~a~~~~~~--~~~----~~~~--~~~~p-~~~~-~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   70 (350)
T cd08240           1 MKAAAVVEP--GKP----LEEV--EIDTP-KPPG-TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVL   70 (350)
T ss_pred             CeeEEeccC--CCC----ceEE--ecCCC-CCCC-CeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCccc
Confidence            688888775  444    3454  46666 4577 99999999999999999888774321           22346789


Q ss_pred             CCeeEEe-----eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCC
Q 037444           79 GELKFWI-----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDV  123 (339)
Q Consensus        79 G~e~~G~-----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~  123 (339)
                      |+|++|+     ++++++++||+|+++                              |++++|+.++.+. ++++ |+++
T Consensus        71 g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~  148 (350)
T cd08240          71 GHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSR-YLVD-PGGL  148 (350)
T ss_pred             ccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHH-eeeC-CCCC
Confidence            9999999     677889999999864                              6899999999998 9999 9996


Q ss_pred             CccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeee
Q 037444          124 PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAF  202 (339)
Q Consensus       124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~  202 (339)
                      +.. +++++++.+.+||+++.+...++++++|+|+| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++
T Consensus       149 s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~  225 (350)
T cd08240         149 DPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVV  225 (350)
T ss_pred             CHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEe
Confidence            555 67888999999999997777777899999996 69999999999999999 7999999999999997 89998888


Q ss_pred             eCCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccccee
Q 037444          203 NYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFL  281 (339)
Q Consensus       203 ~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (339)
                      +.... ++.+.+.+...+++|++||++|. ..+..++++|+++|+++.+|.....      ..........+++++.+..
T Consensus       226 ~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~  298 (350)
T cd08240         226 NGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE------ATLPLPLLPLRALTIQGSY  298 (350)
T ss_pred             cCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC------CcccHHHHhhcCcEEEEcc
Confidence            88775 77777777665589999999985 6889999999999999999875432      1112223344777777766


Q ss_pred             cccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          282 AGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       282 ~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      ...     .+.+.+++++++++.+++.+...++++++++|++.+.+++..||++++
T Consensus       299 ~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         299 VGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             cCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            544     467888999999999987667789999999999999998888999986

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-35  Score=263.89  Aligned_cols=295  Identities=22%  Similarity=0.228  Sum_probs=238.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++.+.  + |  ..+++  .+.|.| .+++ +||+||+.++++|+.|++...+     ..++.++|+|++|+    
T Consensus         1 ~~~~~~~~~--~-~--~~~~~--~~~~~p-~~~~-~ev~v~v~~~~i~~~d~~~~~~-----~~~~~~~g~e~~G~v~~~   66 (305)
T cd08270           1 MRALVVDPD--A-P--LRLRL--GEVPDP-QPAP-HEALVRVAAISLNRGELKFAAE-----RPDGAVPGWDAAGVVERA   66 (305)
T ss_pred             CeEEEEccC--C-C--ceeEE--EecCCC-CCCC-CEEEEEEEEEecCHHHHHhhcc-----CCCCCcccceeEEEEEEe
Confidence            588888775  4 6  33444  445656 3577 9999999999999999987653     23467899999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       ++++.|++||+|+++   |+|++|+.++++. ++++ |++++.. +++++++.+.+||+++.+.... +|++++|+|++
T Consensus        67 G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~  142 (305)
T cd08270          67 AADGSGPAVGARVVGLGAMGAWAELVAVPTGW-LAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGAS  142 (305)
T ss_pred             CCCCCCCCCCCEEEEecCCcceeeEEEEchHH-eEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCC
Confidence             577789999999986   7999999999998 9999 9996665 6888999999999999776555 59999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l  241 (339)
                      |++|++++++|+..|++|+++++++++.+.++ ++|++.+++...  +       ...+++|+++|++|+..+..+++++
T Consensus       143 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~~l  212 (305)
T cd08270         143 GGVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALELL  212 (305)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHHHh
Confidence            99999999999999999999999999999999 799876554322  1       1224799999999998889999999


Q ss_pred             ccCCEEEEEecccccCCCCCccccchHHHHh--ccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHH
Q 037444          242 RLRGRIAVCGMISQYNLEKPEGVHNLEQLIG--KRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAP  319 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~  319 (339)
                      +.+|+++.+|.....     ........+..  ++.++.++.... +....+.++.++++++++++.+.+..++++++++
T Consensus       213 ~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  286 (305)
T cd08270         213 APGGTVVSVGSSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEID  286 (305)
T ss_pred             cCCCEEEEEeccCCC-----cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHH
Confidence            999999999875321     11223333333  577777776653 3334567889999999999997777788999999


Q ss_pred             HHHHHhHcCCccceEEEEe
Q 037444          320 AALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       320 ~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++.+.+++..||+++++
T Consensus       287 ~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         287 EAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.4e-35  Score=268.41  Aligned_cols=302  Identities=16%  Similarity=0.144  Sum_probs=238.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.     +.+++  .|.| .+.+ +||+|||.++++|++|++.+.+.+.. ..+|.++|||++|+    
T Consensus         1 mka~~~~~~--~~-----~~l~~--~~~p-~~~~-~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~v   68 (351)
T cd08285           1 MKAFAMLGI--GK-----VGWIE--KPIP-VCGP-NDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEV   68 (351)
T ss_pred             CceEEEccC--Cc-----cEEEE--CCCC-CCCC-CeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEe
Confidence            689999876  43     35544  4555 3477 99999999999999999888775432 34578999999999    


Q ss_pred             -eCCCCCCCCCEEEe---------------------------------ccceeeEEEecCc--cceeeccCCCCCccccc
Q 037444           86 -LHIQNYAKDDLVWG---------------------------------STGWEEYSLVTAP--QLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~~~a  129 (339)
                       ++++++++||+|++                                 .|+|++|+.++..  . ++++ |++++.. ++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~-~~~l-P~~~~~~-~a  145 (351)
T cd08285          69 GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADAN-LAPL-PDGLTDE-QA  145 (351)
T ss_pred             cCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCc-eEEC-CCCCCHH-Hh
Confidence             67788999999986                                 2678999999974  6 9999 9985554 67


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP  208 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~  208 (339)
                      +.++.++.+||+++ ...++++|++|||+| +|++|++++|+|+.+|+ .|+++++++++.+.++ ++|+++++++... 
T Consensus       146 a~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-  221 (351)
T cd08285         146 VMLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKNG-  221 (351)
T ss_pred             hhhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCCC-
Confidence            78889999999997 668999999999997 59999999999999999 5888888888888888 8999999998876 


Q ss_pred             hHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccc--hHHHHhccccccceeccc
Q 037444          209 DLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN--LEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       209 ~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  284 (339)
                      ++.+.+...+.+ ++|++|||+|+ ..+..++++|+++|+++.+|......    .....  .+....+..++.+.....
T Consensus       222 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~  297 (351)
T cd08285         222 DVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWGVGMGHKTINGGLCPG  297 (351)
T ss_pred             CHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhhhhccccEEEEeecCC
Confidence            888888888776 89999999996 58899999999999999998754310    01111  111223334444322111


Q ss_pred             ccchhHHHHHHHHHHHHcCCcee---eeeeeeCcccHHHHHHHhHcCC-ccceEEEEe
Q 037444          285 YYHLYPKFLELVIPAIREGKMVY---VEDIAEGLENAPAALVGLFTGR-NVGKQLVAV  338 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~~---~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~  338 (339)
                          ..+.++++++++++|++++   .+..+++++++++|++.+.+++ ..+|+++++
T Consensus       298 ----~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         298 ----GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             ----ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence                1456888999999999997   3344589999999999999887 467999874

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=3.2e-35  Score=264.85  Aligned_cols=297  Identities=20%  Similarity=0.201  Sum_probs=240.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +.+.    .+++  +|.| ++++ +||+|||.++++|++|+..+.+...  ...|.++|||++|+    
T Consensus         1 mka~~~~~~--~~~~----~~~~--~~~p-~~~~-~evlv~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~~   68 (338)
T PRK09422          1 MKAAVVNKD--HTGD----VVVE--KTLR-PLKH-GEALVKMEYCGVCHTDLHVANGDFG--DKTGRILGHEGIGIVKEV   68 (338)
T ss_pred             CeEEEecCC--CCCc----eEEE--ecCC-CCCC-CeEEEEEEEEeechhHHHHHcCCCC--CCCCccCCcccceEEEEE
Confidence            689999886  5442    2544  5556 4578 9999999999999999988877543  23467899999999    


Q ss_pred             -eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.|++||+|++                               .|+|++|+.++.+. ++++ |++++.. ++++++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~aa~l~  145 (338)
T PRK09422         69 GPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADY-AVKV-PEGLDPA-QASSIT  145 (338)
T ss_pred             CCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHH-eEeC-CCCCCHH-Heehhh
Confidence             67788999999986                               37899999999988 9999 9996554 688899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-hhhHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLD  211 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~  211 (339)
                      ..+.|||+++ ..+++++|++|||+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.+++++. . ++.
T Consensus       146 ~~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~-~~~  221 (338)
T PRK09422        146 CAGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVE-DVA  221 (338)
T ss_pred             cchhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccc-cHH
Confidence            9999999998 778999999999999 59999999999998 4999999999999999998 999998888764 4 667


Q ss_pred             HHHHHhCCCCcc-EEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          212 AALKRCFPQGID-IYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       212 ~~v~~~~~g~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      +.+++.++ ++| +++++.++..+..++++++.+|+++.+|.....      ..........++..+.++....     .
T Consensus       222 ~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~  289 (338)
T PRK09422        222 KIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES------MDLSIPRLVLDGIEVVGSLVGT-----R  289 (338)
T ss_pred             HHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC------ceecHHHHhhcCcEEEEecCCC-----H
Confidence            77877765 688 555656667899999999999999999864321      1223444555667665554333     5


Q ss_pred             HHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +.++.+++++++|.+.+.+. .++++++++|++.+.++...||+++++
T Consensus       290 ~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~  336 (338)
T PRK09422        290 QDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF  336 (338)
T ss_pred             HHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence            66888999999999876554 479999999999999999999999875

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.8e-35  Score=269.26  Aligned_cols=302  Identities=18%  Similarity=0.165  Sum_probs=243.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.       +.+++..  .|.|.+.++ ++|+||+.++++|++|+..+.|.+.. .++|.++|||++|+    
T Consensus         1 m~a~~~~~~-------~~~~~~~--~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~v   69 (386)
T cd08283           1 MKALVWHGK-------GDVRVEE--VPDPKIEDP-TDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVEEV   69 (386)
T ss_pred             CeeEEEecC-------CCceEEe--CCCCCCCCC-CeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEEEe
Confidence            688888643       3345554  555644357 99999999999999999998886543 34678999999999    


Q ss_pred             -eCCCCCCCCCEEEe--------------------------------------------------ccceeeEEEecCc--
Q 037444           86 -LHIQNYAKDDLVWG--------------------------------------------------STGWEEYSLVTAP--  112 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~--------------------------------------------------~g~~~~~~~v~~~--  112 (339)
                       ++++.+++||+|++                                                  .|+|++|++++++  
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~  149 (386)
T cd08283          70 GPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV  149 (386)
T ss_pred             CCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccC
Confidence             67888999999976                                                  2678999999987  


Q ss_pred             cceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Q 037444          113 QLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDL  191 (339)
Q Consensus       113 ~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~  191 (339)
                      . ++++ |++++.. ++++++..+++||+++ +..++++|++|||+| +|++|++++++|+..|+ +|+++++++++.+.
T Consensus       150 ~-~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~  224 (386)
T cd08283         150 G-PFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEM  224 (386)
T ss_pred             e-EEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            6 9999 9995554 6778899999999999 778999999999996 59999999999999998 69999999999999


Q ss_pred             HHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChh----------------------hHHHHHHhhccCCEEE
Q 037444          192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGK----------------------MLDAVLLNMRLRGRIA  248 (339)
Q Consensus       192 ~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~v  248 (339)
                      ++ +++...++++...+++.+.++.++.+ ++|++|||+|++                      .+..++++++++|+++
T Consensus       225 ~~-~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv  303 (386)
T cd08283         225 AR-SHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVS  303 (386)
T ss_pred             HH-HcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEE
Confidence            98 77444677776641378888888877 899999999753                      6788999999999999


Q ss_pred             EEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhH
Q 037444          249 VCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLF  326 (339)
Q Consensus       249 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~  326 (339)
                      .+|.....     .........+.+++++.+.....     .+.+++++++++++++.+.  +...++++++++|++.+.
T Consensus       304 ~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~  373 (386)
T cd08283         304 IIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTHV-----QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD  373 (386)
T ss_pred             EEcCCCCC-----cCccCHHHHHhCCcEEEeccCCc-----hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence            99875431     11233445677888877764322     5678899999999999863  456789999999999998


Q ss_pred             cCC-ccceEEEEe
Q 037444          327 TGR-NVGKQLVAV  338 (339)
Q Consensus       327 ~~~-~~gkvvv~~  338 (339)
                      ++. ..+|++++.
T Consensus       374 ~~~~~~~k~~~~~  386 (386)
T cd08283         374 KKEDGCIKVVLKP  386 (386)
T ss_pred             hCCCCeEEEEecC
Confidence            877 568999863

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4.9e-35  Score=261.42  Aligned_cols=305  Identities=20%  Similarity=0.230  Sum_probs=243.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      ||++++.+.  +.+  ..+.+.  +.+.| ++.+ +||+||++++++|+.|+....+... ....|.++|+|++|+   -
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~--~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~v   71 (320)
T cd08243           1 MKAIVIEQP--GGP--EVLKLR--EIPIP-EPKP-GWVLIRVKAFGLNRSEIFTRQGHSP-SVKFPRVLGIEAVGEVEEA   71 (320)
T ss_pred             CeEEEEcCC--CCc--cceEEe--ecCCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCC-CCCCCccccceeEEEEEEe
Confidence            578888765  444  344454  44445 4577 9999999999999999988877543 234468899999999   3


Q ss_pred             CCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           87 HIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                      +...+++||+|+++         |+|++|+.++++. ++++ |++++.. +++++++++.+||+++.+...+++|++|+|
T Consensus        72 G~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV  148 (320)
T cd08243          72 PGGTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQ-VYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTLLI  148 (320)
T ss_pred             cCCCCCCCCEEEEecCCCCCCCCcccceEEEcCHHH-cEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEEEE
Confidence            34569999999986         7899999999998 9999 9986554 688899999999999988888999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHH
Q 037444          158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV  237 (339)
Q Consensus       158 ~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~  237 (339)
                      +|++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++. .. ++.+.+++. ++++|++|||+|+..+..+
T Consensus       149 ~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~~  224 (320)
T cd08243         149 RGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTATLKDS  224 (320)
T ss_pred             EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHHHHHH
Confidence            999999999999999999999999999999999998 8999888754 43 777778877 4489999999999889999


Q ss_pred             HHhhccCCEEEEEecccccCCCCCccccchHH--HHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQ--LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      +++++++|+++.+|......   .........  .+.+++++.++....   .....+++++++++++.+++.+...+++
T Consensus       225 ~~~l~~~g~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l  298 (320)
T cd08243         225 LRHLRPGGIVCMTGLLGGQW---TLEDFNPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGHLDIPPSKVFTF  298 (320)
T ss_pred             HHHhccCCEEEEEccCCCCc---ccCCcchhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCceecccccEEcH
Confidence            99999999999998743221   000111111  235666666554432   1235688899999999998766677899


Q ss_pred             ccHHHHHHHhHcCCccceEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +++++|++.+.++...||+++
T Consensus       299 ~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         299 DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHHHHHhCCCCCcEEe
Confidence            999999999998888888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6.4e-35  Score=265.15  Aligned_cols=302  Identities=22%  Similarity=0.246  Sum_probs=244.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+    +++++  +|.| .+++ ++|+|||.++++|+.|+..+.+.+.  ..+|.++|+|++|+    
T Consensus         1 m~a~~~~~~--~~~----~~~~~--~~~p-~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~v   68 (363)
T cd08279           1 MRAAVLHEV--GKP----LEIEE--VELD-DPGP-GEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAGVVEEV   68 (363)
T ss_pred             CeEEEEecC--CCC----ceEEE--eeCC-CCCC-CeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceEEEEEe
Confidence            689999886  544    35544  5556 3477 9999999999999999998887553  34567899999999    


Q ss_pred             -eCCCCCCCCCEEEe--------------------------------------------------ccceeeEEEecCccc
Q 037444           86 -LHIQNYAKDDLVWG--------------------------------------------------STGWEEYSLVTAPQL  114 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~--------------------------------------------------~g~~~~~~~v~~~~~  114 (339)
                       ++++.|++||+|++                                                  .|+|++|+.++++. 
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-  147 (363)
T cd08279          69 GPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEAS-  147 (363)
T ss_pred             CCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEecccc-
Confidence             67778999999987                                                  26899999999998 


Q ss_pred             eeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHH
Q 037444          115 LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLK  193 (339)
Q Consensus       115 ~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~  193 (339)
                      ++++ |++++.. +++.+++++.+||+++.+..++++|++|||+| +|++|++++++|+..|++ |+++++++++.+.++
T Consensus       148 ~~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~  224 (363)
T cd08279         148 VVKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR  224 (363)
T ss_pred             EEEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence            9999 9996655 67888999999999998888999999999996 599999999999999996 999999999989887


Q ss_pred             HHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHH
Q 037444          194 NKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLI  271 (339)
Q Consensus       194 ~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  271 (339)
                       ++|++++++++.. ++..+++..+.+ ++|++||++++ ..+..++++++++|+++.+|.....    .........+.
T Consensus       225 -~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~  298 (363)
T cd08279         225 -RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELF  298 (363)
T ss_pred             -HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHh
Confidence             8999999988876 888888888766 89999999994 6888999999999999999864321    11223444455


Q ss_pred             hccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEE
Q 037444          272 GKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQL  335 (339)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv  335 (339)
                      .++..+.++.+..  ....+.+++++++++++.+.+.  +..+++++++++|++.+.+++..+.++
T Consensus       299 ~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         299 LSEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             hcCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            5566655554322  1225678999999999998863  566789999999999999887765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=1.1e-35  Score=267.75  Aligned_cols=300  Identities=20%  Similarity=0.192  Sum_probs=240.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++++..  | |  ..+.+  .+.|.|. +++ +||+||+.++++|++|+....+..  ...+|.++|+|++|+    
T Consensus         1 m~a~~~~~~--~-~--~~~~~--~~~~~p~-~~~-~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~v   69 (339)
T cd08249           1 QKAAVLTGP--G-G--GLLVV--VDVPVPK-PGP-DEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEV   69 (339)
T ss_pred             CceEEeccC--C-C--Ccccc--cCCCCCC-CCC-CEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEe
Confidence            689999775  4 4  34444  5566664 478 999999999999999998765533  123467899999999    


Q ss_pred             -eCCCCCCCCCEEEec-----------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCC----
Q 037444           86 -LHIQNYAKDDLVWGS-----------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSP----  149 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~----  149 (339)
                       +++..+++||+|+++           |+|++|+.++.+. ++++ |++++.. +++.+++++.+||+++.+..++    
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~  146 (339)
T cd08249          70 GSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADL-TAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPP  146 (339)
T ss_pred             CCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhh-eEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCC
Confidence             667789999999986           7899999999988 9999 9985555 6778899999999998766554    


Q ss_pred             ------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          150 ------KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       150 ------~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                            +++++|+|+|++|.+|++++++|+.+|++|++++ ++++.+.++ ++|+++++++... ++.+.+++.+++++|
T Consensus       147 ~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d  223 (339)
T cd08249         147 PKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLR  223 (339)
T ss_pred             CCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCee
Confidence                  7899999999999999999999999999999988 568888887 8999999998876 888888887767899


Q ss_pred             EEEECCCh-hhHHHHHHhhcc--CCEEEEEecccccCCCCCccccchHHHHhccccccceeccc-------ccchhHHHH
Q 037444          224 IYFENVGG-KMLDAVLLNMRL--RGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD-------YYHLYPKFL  293 (339)
Q Consensus       224 ~vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l  293 (339)
                      ++||++|+ ..+..+++++++  +|+++.+|......            .+..+.+........       .+......+
T Consensus       224 ~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
T cd08249         224 YALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFW  291 (339)
T ss_pred             EEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccccccchHHHH
Confidence            99999998 789999999999  99999998754321            011122222221111       123334668


Q ss_pred             HHHHHHHHcCCceeeeeeeeC--cccHHHHHHHhHcCC-ccceEEEEe
Q 037444          294 ELVIPAIREGKMVYVEDIAEG--LENAPAALVGLFTGR-NVGKQLVAV  338 (339)
Q Consensus       294 ~~~~~~l~~g~~~~~~~~~~~--l~~~~~a~~~~~~~~-~~gkvvv~~  338 (339)
                      ++++++++++.+.+.....++  ++++++|++.+.+++ ..+|+|+++
T Consensus       292 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         292 KYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            889999999999877666677  999999999999998 889999875

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=9.7e-35  Score=260.19  Aligned_cols=308  Identities=17%  Similarity=0.161  Sum_probs=244.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||+++.+.  |.|  +.+.+++  .|.| ++++ ++|+||+.++++|+.|.....+.+.....+|.++|||++|+   +
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~p-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~~   72 (324)
T cd08288           1 FKALVLEKD--DGG--TSAELRE--LDES-DLPE-GDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVES   72 (324)
T ss_pred             CeeEEEecc--CCC--cceEEEE--CCCC-CCCC-CeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEeC
Confidence            689999886  665  4455654  5556 4577 99999999999999999887775432233578899999999   6


Q ss_pred             CCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH--hcCCC-CCCE
Q 037444           87 HIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPK-KGEY  154 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~-~g~~  154 (339)
                      +++.+++||+|+++         |+|++|+.++++. ++++ |++++.. +++.++..+++|+.++..  ..... +|++
T Consensus        73 ~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~  149 (324)
T cd08288          73 SSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADW-LVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPGDGP  149 (324)
T ss_pred             CCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHH-eeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCCCCE
Confidence            77789999999984         7899999999998 9999 9995554 577889999999877641  23445 6789


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      |+|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|+++++++.+.   ...++..+.+++|.+||++++..+
T Consensus       150 vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~  225 (324)
T cd08288         150 VLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL---SEPGRPLQKERWAGAVDTVGGHTL  225 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh---hHhhhhhccCcccEEEECCcHHHH
Confidence            999999999999999999999999999999999999997 8999999987643   335555655579999999998777


Q ss_pred             HHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ..++..++.+|+++.+|.....+     .......++.+++++.+...... .....+.++.+.+++.++.+.+ +...+
T Consensus       226 ~~~~~~~~~~g~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~  299 (324)
T cd08288         226 ANVLAQTRYGGAVAACGLAGGAD-----LPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTREI  299 (324)
T ss_pred             HHHHHHhcCCCEEEEEEecCCCC-----CCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cceee
Confidence            88889999999999998753211     11233444578888888764333 2234567788888999998876 45678


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++++|++.+.+++..||+++++
T Consensus       300 ~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         300 PLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             cHHHHHHHHHHHhcCCccCeEEEeC
Confidence            9999999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=9.3e-35  Score=264.53  Aligned_cols=306  Identities=17%  Similarity=0.156  Sum_probs=238.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .+|||+++.+.  +++    ++++  ++|.|. +.+ +||+|||.++++|++|++.+.|...  ..+|.++|||++|+  
T Consensus         6 ~~~~a~~~~~~--~~~----~~l~--~~p~p~-~~~-~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~   73 (373)
T cd08299           6 IKCKAAVLWEP--KKP----FSIE--EIEVAP-PKA-HEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVE   73 (373)
T ss_pred             ceeEEEEEecC--CCC----cEEE--EeecCC-CCC-CEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEE
Confidence            35899988875  433    4554  456663 477 9999999999999999999888652  34678999999999  


Q ss_pred             ---eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecC
Q 037444           86 ---LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTA  111 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  111 (339)
                         +++..+++||+|+++                                                   |+|+||+++++
T Consensus        74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~  153 (373)
T cd08299          74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE  153 (373)
T ss_pred             EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence               577889999999863                                                   67999999999


Q ss_pred             ccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 037444          112 PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD  190 (339)
Q Consensus       112 ~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~  190 (339)
                      +. ++++ |++++.. +++.+++++.+||+++...+++++|++|+|+| +|++|++++++|+.+|+ +|+++++++++++
T Consensus       154 ~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~  229 (373)
T cd08299         154 IA-VAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFA  229 (373)
T ss_pred             cc-eeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            98 9999 9996555 67788889999999987888999999999996 59999999999999999 8999999999999


Q ss_pred             HHHHHhCCCeeeeCCCh-hhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhh-ccCCEEEEEecccccCCCCCccccch
Q 037444          191 LLKNKFGFDDAFNYKEE-PDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNM-RLRGRIAVCGMISQYNLEKPEGVHNL  267 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~-~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~  267 (339)
                      .++ ++|++++++..+. .++.+.+++.+.+++|++|||+|+ ..+..++..+ +++|+++.+|.....    .......
T Consensus       230 ~a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~  304 (373)
T cd08299         230 KAK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS----QNLSINP  304 (373)
T ss_pred             HHH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC----ceeecCH
Confidence            998 8999999987643 136677777766689999999996 5777777765 579999999875321    0111222


Q ss_pred             HHHHhccccccceecccccchhHHHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          268 EQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      . .+.++.++.++....+..  ...+.++++.+.++.++  +.+..+|+++++++|++.+.+++.. |+++++
T Consensus       305 ~-~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~-k~~~~~  373 (373)
T cd08299         305 M-LLLTGRTWKGAVFGGWKS--KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI-RTVLTF  373 (373)
T ss_pred             H-HHhcCCeEEEEEecCCcc--HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcc-eEEEeC
Confidence            2 244677777776544321  34566677777777554  3456788999999999998877654 888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.7e-34  Score=259.83  Aligned_cols=305  Identities=24%  Similarity=0.272  Sum_probs=255.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++++..  +.+  +.+.+..  .+.| .+++ ++++|++.++++|++|+....+.+......|.++|||++|+    
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~   72 (336)
T cd08276           1 MKAWRLSGG--GGL--DNLKLVE--EPVP-EPGP-GEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAV   72 (336)
T ss_pred             CeEEEEecc--CCC--cceEEEe--ccCC-CCCC-CeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEe
Confidence            689999876  555  4455543  4545 3477 99999999999999999988776543334678899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHH
Q 037444           86 -LHIQNYAKDDLVWGS------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAY  140 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~  140 (339)
                       +++.+|++||+|++.                        |+|++|+.++.+. ++++ |++++.. +++.++..+.+||
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~~~~~~~a~  149 (336)
T cd08276          73 GEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEG-LVRA-PDHLSFE-EAATLPCAGLTAW  149 (336)
T ss_pred             CCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHH-eEEC-CCCCCHH-HhhhhhHHHHHHH
Confidence             567779999999874                        5799999999988 9999 9985544 6778899999999


Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-hhhHHHHHHHhCC
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLDAALKRCFP  219 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~~  219 (339)
                      +++.+...+++|++|+|+| +|++|++++++|+..|++|+++++++++.+.++ ++|.+.+++... . ++.+.++..+.
T Consensus       150 ~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~  226 (336)
T cd08276         150 NALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEEVLKLTG  226 (336)
T ss_pred             HHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHHHHHcC
Confidence            9998888999999999995 699999999999999999999999999999998 789988888776 5 78888888887


Q ss_pred             C-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHH
Q 037444          220 Q-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP  298 (339)
Q Consensus       220 g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  298 (339)
                      + ++|++||+.+...+..++++++++|+++.+|......     .......++.+++++.++....     ...++++++
T Consensus       227 ~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  296 (336)
T cd08276         227 GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFE-----APVLLLPLLTKGATLRGIAVGS-----RAQFEAMNR  296 (336)
T ss_pred             CCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCc-----cCcCHHHHhhcceEEEEEecCc-----HHHHHHHHH
Confidence            6 9999999999888899999999999999998754321     1234566778899888877654     567888999


Q ss_pred             HHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       299 ~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++.+.+.....+++++++++++.+.++...+|+++++
T Consensus       297 l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         297 AIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999988876667789999999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=8.8e-35  Score=261.92  Aligned_cols=301  Identities=22%  Similarity=0.252  Sum_probs=248.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++...  ++|  . +.+  .+.|.| .+++ ++|+|++.++++|+.|.....+.......+|.++|+|++|+    
T Consensus         1 ~~~~~~~~~--~~~--~-~~~--~~~~~~-~~~~-~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~   71 (338)
T cd08254           1 MKAWRFHKG--SKG--L-LVL--EEVPVP-EPGP-GEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEV   71 (338)
T ss_pred             CeeEEEecC--CCC--c-eEE--eccCCC-CCCC-CeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEE
Confidence            689999887  666  2 344  456666 4577 99999999999999999988886643445577899999999    


Q ss_pred             -eCCCCCCCCCEEEe------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.+++||+|++                              .|+|++|+.++.+. ++++ |++++.. ++++++.
T Consensus        72 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~a~~~~~  148 (338)
T cd08254          72 GAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARA-LVPV-PDGVPFA-QAAVATD  148 (338)
T ss_pred             CCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHH-eEEC-CCCCCHH-Hhhhhcc
Confidence             67788999999986                              27899999999988 9999 9996554 6888999


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      ++.+||+++....+++++++|||.| +|.+|++++++|+..|++|+++++++++.+.++ ++|++++++.... ...+.+
T Consensus       149 ~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~  225 (338)
T cd08254         149 AVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK  225 (338)
T ss_pred             hHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH
Confidence            9999999998888899999999976 599999999999999999999999999999998 8999888887765 666666


Q ss_pred             HHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          215 KRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       215 ~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                       ..+.+ ++|+++||+|. ..+..++++|+++|+++.+|.....      .......++.++..+.++....     ...
T Consensus       226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~  293 (338)
T cd08254         226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSFGGT-----PED  293 (338)
T ss_pred             -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEeccCC-----HHH
Confidence             44554 89999999985 5888999999999999999864321      1233455667777777655433     567


Q ss_pred             HHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +..++++++++.+.+. ...+++++++++++.+.+++..||+|+++
T Consensus       294 ~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         294 LPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            8889999999999876 56789999999999999999999999874

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=6.3e-35  Score=263.88  Aligned_cols=301  Identities=20%  Similarity=0.149  Sum_probs=241.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +     .+.+.  +.|.|.+..+ ++|+|||.++++|+.|+..+.+.+.. ..+|.++|+|++|+    
T Consensus         1 ~ka~~~~~~--~-----~~~~~--~~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~v   69 (347)
T cd05278           1 MKALVYLGP--G-----KIGLE--EVPDPKIQGP-HDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEV   69 (347)
T ss_pred             CceEEEecC--C-----ceEEE--EcCCCCCCCC-CeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEE
Confidence            588888764  2     23454  4565633267 99999999999999999988886543 34578999999999    


Q ss_pred             -eCCCCCCCCCEEEe---------------------------------ccceeeEEEecCc--cceeeccCCCCCccccc
Q 037444           86 -LHIQNYAKDDLVWG---------------------------------STGWEEYSLVTAP--QLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~~~a  129 (339)
                       ++++.+++||+|++                                 .|+|++|++++++  . ++++ |++++.. ++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~~~~~-~a  146 (347)
T cd05278          70 GSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI-PDGLPDE-DA  146 (347)
T ss_pred             CCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCe-EEEC-CCCCCHH-HH
Confidence             67888999999987                                 2789999999987  6 9999 9996554 68


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP  208 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~  208 (339)
                      +.++.++.+||+++ ...++++|++|||.| +|++|++++|+|+.+|+ +|+++.+++++.+.++ ++|+++++++... 
T Consensus       147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-  222 (347)
T cd05278         147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKNG-  222 (347)
T ss_pred             hhhcchhhheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCcc-
Confidence            88999999999998 678899999999976 59999999999999997 8999988888888888 8999999998876 


Q ss_pred             hHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc
Q 037444          209 DLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY  286 (339)
Q Consensus       209 ~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
                      ++.+.++..+++ ++|++||++|+ ..+..++++|+++|+++.+|......    .. ......+.+++++.+.....  
T Consensus       223 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~--  295 (347)
T cd05278         223 DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPD----PL-PLLGEWFGKNLTFKTGLVPV--  295 (347)
T ss_pred             hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCc----cc-CccchhhhceeEEEeeccCc--
Confidence            788888888776 89999999997 68899999999999999998543221    00 11122345666666543322  


Q ss_pred             chhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCc-cceEEEEe
Q 037444          287 HLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRN-VGKQLVAV  338 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~  338 (339)
                         .+.++++++++.++.+.+.  +...+++++++++++.+..++. .+|+++++
T Consensus       296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             ---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence               5678899999999998863  4567899999999999988776 67998863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=261.15  Aligned_cols=298  Identities=24%  Similarity=0.268  Sum_probs=241.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++++++  +.+    ++++  ++|.|. +++ +|++||+.++++|++|+....|... ...+|.++|+|++|+    
T Consensus         1 m~a~~~~~~--~~~----~~~~--~~~~~~-~~~-~~v~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~~g~e~~G~v~~~   69 (334)
T PRK13771          1 MKAVILPGF--KQG----YRIE--EVPDPK-PGK-DEVVIKVNYAGLCYRDLLQLQGFYP-RMKYPVILGHEVVGTVEEV   69 (334)
T ss_pred             CeeEEEcCC--CCC----cEEE--eCCCCC-CCC-CeEEEEEEEEeechhhHHHhcCCCC-CCCCCeeccccceEEEEEe
Confidence            689998876  543    3554  466664 477 9999999999999999988877543 234567899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.+++||+|++.                              |+|++|+.++.+. ++++ |++++.. +++.+++
T Consensus        70 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~a~l~~  146 (334)
T PRK13771         70 GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS-LVKV-PPNVSDE-GAVIVPC  146 (334)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhc-eEEC-CCCCCHH-Hhhcccc
Confidence             566779999999974                              6799999999998 9999 9996655 6788899


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .+.+||+++... .++++++|+|+|++|.+|++++++|+..|++|+++++++++.+.++ ++ +++++++.   ++.+.+
T Consensus       147 ~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v  220 (334)
T PRK13771        147 VTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSEEV  220 (334)
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHHHH
Confidence            999999999665 8999999999999999999999999999999999999999999887 77 76666554   345556


Q ss_pred             HHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          215 KRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                      +..  +++|++|||+|+.....++++++++|+++.+|..+...    .........+.+++++.+.....     .+.++
T Consensus       221 ~~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  289 (334)
T PRK13771        221 KKI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP----TYSLRLGYIILKDIEIIGHISAT-----KRDVE  289 (334)
T ss_pred             Hhc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC----CcccCHHHHHhcccEEEEecCCC-----HHHHH
Confidence            554  37999999999988899999999999999998753210    00122233356777777653322     66788


Q ss_pred             HHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          295 LVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       295 ~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++++++.+++.+...++++++++|++.+.++...||++++.
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        290 EALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            99999999999877777899999999999999888889999875

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.1e-34  Score=263.56  Aligned_cols=302  Identities=19%  Similarity=0.200  Sum_probs=239.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      +||+++.+.  +++    +++++  +|.| ++.+ ++|+||+.++++|+.|++.+.+.+.  ..+|.++|||++|+    
T Consensus         1 ~~a~~~~~~--~~~----~~~~~--~~~p-~~~~-~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~~G~V~~v   68 (365)
T cd05279           1 CKAAVLWEK--GKP----LSIEE--IEVA-PPKA-GEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEGAGIVESI   68 (365)
T ss_pred             CceeEEecC--CCC----cEEEE--eecC-CCCC-CeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccceeEEEEEe
Confidence            478888875  433    45654  5555 4477 9999999999999999998887543  34678999999999    


Q ss_pred             -eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecCcc
Q 037444           86 -LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTAPQ  113 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~~~  113 (339)
                       ++++.+++||+|++.                                                   |+|++|+.++++.
T Consensus        69 G~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~  148 (365)
T cd05279          69 GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEIS  148 (365)
T ss_pred             CCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCc
Confidence             678889999999864                                                   5789999999998


Q ss_pred             ceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHH
Q 037444          114 LLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLL  192 (339)
Q Consensus       114 ~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~  192 (339)
                       ++++ |++++.. +++.++.++.+||+++.+.+++++|++|||+| +|++|++++++|+.+|++ |+++.+++++.+.+
T Consensus       149 -~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~  224 (365)
T cd05279         149 -LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA  224 (365)
T ss_pred             -eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence             9999 9996555 67788889999999988888999999999996 599999999999999995 77777789999999


Q ss_pred             HHHhCCCeeeeCCChh-hHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhc-cCCEEEEEecccccCCCCCccccchHH
Q 037444          193 KNKFGFDDAFNYKEEP-DLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMR-LRGRIAVCGMISQYNLEKPEGVHNLEQ  269 (339)
Q Consensus       193 ~~~~g~~~v~~~~~~~-~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~  269 (339)
                      + ++|++++++..+.+ ++.+.+++.+++++|++||++|. ..+..++++++ ++|+++.+|.....    .....+...
T Consensus       225 ~-~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~  299 (365)
T cd05279         225 K-QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATLDPND  299 (365)
T ss_pred             H-HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----CceeeCHHH
Confidence            7 99999888766521 45667777775589999999985 78889999999 99999999864311    112233334


Q ss_pred             HHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          270 LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      + .++..+.|.....+.  ..+.+.+++++++++.+++.  ...+++++++++|++.+.+++.. |+++
T Consensus       300 ~-~~~~~l~g~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         300 L-LTGRTIKGTVFGGWK--SKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             H-hcCCeEEEEeccCCc--hHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            4 566666665443321  25678889999999998853  66678999999999999877654 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=260.51  Aligned_cols=296  Identities=16%  Similarity=0.108  Sum_probs=232.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.       ..+.+.  +.|.| ++++ ++|+||+.++++|++|++.+.|.... ...|.++|||++|+    
T Consensus         1 m~a~~~~~~-------~~~~~~--~~~~p-~~~~-~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~~v   68 (339)
T PRK10083          1 MKSIVIEKP-------NSLAIE--ERPIP-QPAA-GEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVIDAV   68 (339)
T ss_pred             CeEEEEecC-------CeeEEE--eccCC-CCCC-CeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEEEE
Confidence            588888764       234554  45666 3477 99999999999999999888775432 23578999999999    


Q ss_pred             -eCCCCCCCCCEEEe------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.+++||+|+.                              .|+|++|+.+++.. ++++ |++++.  +.+++..
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~--~~a~~~~  144 (339)
T PRK10083         69 GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKN-AHRI-PDAIAD--QYAVMVE  144 (339)
T ss_pred             CCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHH-eEEC-cCCCCH--HHHhhhc
Confidence             67888999999982                              27899999999998 9999 999544  3345677


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKL-AGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDA  212 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~-~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  212 (339)
                      ++.++++++ ...++++|++|+|+| +|++|++++|+|+. +|++ ++++.+++++.+.++ ++|+++++++++. ++.+
T Consensus       145 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~  220 (339)
T PRK10083        145 PFTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PLGE  220 (339)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHH
Confidence            888888654 678999999999999 69999999999996 6995 777778888889888 9999999988775 6766


Q ss_pred             HHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          213 ALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       213 ~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      .+..  .+ ++|++||++|+ ..+..++++++++|+++.+|.....      ..........+++++.+...      ..
T Consensus       221 ~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~------~~  286 (339)
T PRK10083        221 ALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSRL------NA  286 (339)
T ss_pred             HHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEec------Ch
Confidence            6643  23 57899999995 5889999999999999999874321      11233344456666555432      24


Q ss_pred             HHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCC-ccceEEEEeC
Q 037444          291 KFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGR-NVGKQLVAVA  339 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~  339 (339)
                      +.++++++++++|.+++.  +..+|+++++++|++.+.++. ..+|+++++.
T Consensus       287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~  338 (339)
T PRK10083        287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA  338 (339)
T ss_pred             hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence            568899999999999873  667899999999999998653 5689999863

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.9e-34  Score=258.53  Aligned_cols=297  Identities=19%  Similarity=0.180  Sum_probs=239.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +     .+.+.  +.|.|. +.+ +||+|||.++++|+.|+....+.... ..+|.++|+|++|+    
T Consensus         1 ~~a~~~~~~--~-----~~~~~--~~~~~~-~~~-~~v~v~v~~~~l~~~d~~~~~~~~~~-~~~~~~~g~e~~G~V~~~   68 (337)
T cd08261           1 MKALVCEKP--G-----RLEVV--DIPEPV-PGA-GEVLVRVKRVGICGSDLHIYHGRNPF-ASYPRILGHELSGEVVEV   68 (337)
T ss_pred             CeEEEEeCC--C-----ceEEE--ECCCCC-CCC-CeEEEEEEEEeEcccChHHHcCCCCc-CCCCcccccccEEEEEEe
Confidence            588888764  2     23444  455563 477 99999999999999999888775432 23477899999999    


Q ss_pred             -eCCCCCCCCCEEEe------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.|++||+|++                              .|+|++|+.++++  ++++ |++++.. +++.+ .
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~-p~~~~~~-~aa~~-~  143 (337)
T cd08261          69 GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD--ALLV-PEGLSLD-QAALV-E  143 (337)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh--eEEC-CCCCCHH-Hhhhh-c
Confidence             67778999999986                              3789999999986  8899 9995543 45544 6


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .++++++++ ...++++|++|||+| +|.+|++++|+|+.+|++|+++++++++.+.++ ++|+++++++... ++.+.+
T Consensus       144 ~~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l  219 (337)
T cd08261         144 PLAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAARL  219 (337)
T ss_pred             hHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHHHH
Confidence            788999988 778999999999996 599999999999999999999999999999997 8999999998886 888888


Q ss_pred             HHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          215 KRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       215 ~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                      ++.+.+ ++|++|||+|+ ..+..++++|+++|+++.++.....      .......+..+++++.+...     ...+.
T Consensus       220 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~~  288 (337)
T cd08261         220 RELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSRN-----ATRED  288 (337)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEecc-----CChhh
Confidence            888776 89999999986 6888999999999999998864321      11223344556666655432     23567


Q ss_pred             HHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcC-CccceEEEEe
Q 037444          293 LELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTG-RNVGKQLVAV  338 (339)
Q Consensus       293 l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv~~  338 (339)
                      ++++++++++|.+++  .+..++++++++++++.+.++ ...+|+|+++
T Consensus       289 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         289 FPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            888999999999987  667788999999999999988 4778999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.7e-34  Score=260.72  Aligned_cols=302  Identities=22%  Similarity=0.256  Sum_probs=241.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +     .+.++.  .|.| ++.+ +||+||+.++++|+.|+....+.+.  ..+|.++|+|++|+    
T Consensus         1 ~~a~~~~~~--~-----~l~~~~--~~~~-~l~~-~~v~v~v~~~~~n~~d~~~~~~~~~--~~~~~~~g~~~~G~V~~~   67 (343)
T cd08236           1 MKALVLTGP--G-----DLRYED--IPKP-EPGP-GEVLVKVKACGICGSDIPRYLGTGA--YHPPLVLGHEFSGTVEEV   67 (343)
T ss_pred             CeeEEEecC--C-----ceeEEe--cCCC-CCCC-CeEEEEEEEEEECccchHhhcCCCC--CCCCcccCcceEEEEEEE
Confidence            689999875  2     245544  4555 4577 9999999999999999988777542  23568899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       +++..|++||+|+++                              |+|++|+.++++. ++++ |++++.. +++.+ .
T Consensus        68 g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-P~~~~~~-~aa~~-~  143 (343)
T cd08236          68 GSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARN-LIKI-PDHVDYE-EAAMI-E  143 (343)
T ss_pred             CCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHH-eEEC-cCCCCHH-HHHhc-c
Confidence             677889999999984                              7899999999998 9999 9995544 45555 6


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      ++++||+++. ..+++++++|+|+| +|.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.+++++.. . .++
T Consensus       144 ~~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~  218 (343)
T cd08236         144 PAAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-VEK  218 (343)
T ss_pred             hHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-HHH
Confidence            7899999995 78899999999997 599999999999999997 999999999989887 8999889988876 6 777


Q ss_pred             HHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHH
Q 037444          214 LKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK  291 (339)
Q Consensus       214 v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
                      ++....+ ++|++|||+|+ ..+..++++|+++|+++.+|.....   ..........++.+++++.++..........+
T Consensus       219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (343)
T cd08236         219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD---VTLSEEAFEKILRKELTIQGSWNSYSAPFPGD  295 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC---cccccCCHHHHHhcCcEEEEEeeccccccchh
Confidence            8877776 89999999986 5788999999999999999864321   01112234455677888888766433223356


Q ss_pred             HHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHc-CCccceEEE
Q 037444          292 FLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFT-GRNVGKQLV  336 (339)
Q Consensus       292 ~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvv  336 (339)
                      .+++++++++++.+.  +.+...+++++++++++.+.+ +...||+|+
T Consensus       296 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         296 EWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            688899999999875  345667899999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=2.7e-34  Score=256.92  Aligned_cols=310  Identities=25%  Similarity=0.346  Sum_probs=254.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++...  +.|  ..+.+.  +.|.| .+.+ ++|+|++.++++|++|+..+.|.+......|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~--~~~~~-~l~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~   72 (325)
T cd08253           1 MRAIRYHEF--GAP--DVLRLG--DLPVP-TPGP-GEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAV   72 (325)
T ss_pred             CceEEEccc--CCc--ccceee--ecCCC-CCCC-CEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEee
Confidence            578888876  555  334454  55666 3577 99999999999999999888775543445678999999999    


Q ss_pred             -eCCCCCCCCCEEEec--------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 -LHIQNYAKDDLVWGS--------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                       ++++.|++||+|+++        |++++|+.++.+. ++++ |++++.. +++++++++.+||+++....++.+|++++
T Consensus        73 g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~vl  149 (325)
T cd08253          73 GEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQ-LVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETVL  149 (325)
T ss_pred             CCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEEE
Confidence             677889999999984        6899999999988 9999 9986555 68889999999999998878999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|+++++|++++++++..|++|+++++++++.+.++ ++|++++++.... ++.+.+.+.+.+ ++|+++||.|+....
T Consensus       150 I~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (325)
T cd08253         150 VHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLA  227 (325)
T ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHHHH
Confidence            9999999999999999999999999999999999998 8999888888776 788888887766 899999999988888


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeC
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEG  314 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~  314 (339)
                      ..+++++.+|+++.++.....      .......++.++.++.+...... +....+.++.+.+++.++.+.+.....++
T Consensus       228 ~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  301 (325)
T cd08253         228 KDLDVLAPGGRIVVYGSGGLR------GTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYP  301 (325)
T ss_pred             HHHHhhCCCCEEEEEeecCCc------CCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEc
Confidence            999999999999999874311      12233344567777666553332 33445677888889999988877777789


Q ss_pred             cccHHHHHHHhHcCCccceEEEEe
Q 037444          315 LENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       315 l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++++++.+.++...||+++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         302 LEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHHHHHHHHcCCCcceEEEeC
Confidence            999999999999988899999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3.2e-34  Score=259.08  Aligned_cols=300  Identities=17%  Similarity=0.103  Sum_probs=242.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +     .+.++  +.|.|.+..+ +||+|||.++++|+.|+..+.|.+.. ..+|.++|||++|+    
T Consensus         1 m~a~~~~~~--~-----~~~~~--~~~~p~~~~~-~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~   69 (345)
T cd08286           1 MKALVYHGP--G-----KISWE--DRPKPTIQEP-TDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHEGVGVVEEV   69 (345)
T ss_pred             CceEEEecC--C-----ceeEE--ecCCCCCCCC-CeEEEEEEEeeecchhhHHHcCCCCC-CCCCceecccceEEEEEe
Confidence            588888764  3     24554  4565644467 99999999999999999998886542 23478999999999    


Q ss_pred             -eCCCCCCCCCEEEec-------------------------------cceeeEEEecCc--cceeeccCCCCCccccccc
Q 037444           86 -LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAP--QLLIKIQHTDVPLSYYTGI  131 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~~~~aa~  131 (339)
                       ++++.+++||+|++.                               |+|++|+.++.+  . ++++ |++++.. +++.
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-p~~~~~~-~aa~  146 (345)
T cd08286          70 GSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNS-LYKL-PEGVDEE-AAVM  146 (345)
T ss_pred             ccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCc-eEEC-CCCCCHH-Hhhh
Confidence             677789999999873                               678999999987  6 9999 9986554 6788


Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      ++..+++||+++....++++|++|||.|+ |++|++++|+|+.+| .+|+++.+++++.+.++ ++|+++++++... ++
T Consensus       147 l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~  223 (345)
T cd08286         147 LSDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-DA  223 (345)
T ss_pred             ccchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-cH
Confidence            99999999998777788999999999875 999999999999999 69999888888888888 8999999998876 78


Q ss_pred             HHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccch
Q 037444          211 DAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL  288 (339)
Q Consensus       211 ~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
                      ...+...+.+ ++|++|||+|+ ..+..++++|+++|+++.+|....      ........++.+++++.+....     
T Consensus       224 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-----  292 (345)
T cd08286         224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------PVDLHLEKLWIKNITITTGLVD-----  292 (345)
T ss_pred             HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------CCCcCHHHHhhcCcEEEeecCc-----
Confidence            7888887776 89999999986 578899999999999999986422      1223445557788887764321     


Q ss_pred             hHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCc--cceEEEEe
Q 037444          289 YPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRN--VGKQLVAV  338 (339)
Q Consensus       289 ~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~--~gkvvv~~  338 (339)
                       .+.+++++++++++.+++.  +..++++++++++++.+.+...  ..|+++++
T Consensus       293 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         293 -TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             -hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence             2457888999999998753  5677899999999999987532  34888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=3.2e-34  Score=261.49  Aligned_cols=304  Identities=18%  Similarity=0.147  Sum_probs=236.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++.+     |  ..+++  .++|.|.++++ +||+|||.++++|++|++...|.+.  ..+|.++|||++|+    
T Consensus         1 m~~~~~~~-----~--~~~~~--~~~~~p~~~~~-~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G~V~~v   68 (375)
T cd08282           1 MKAVVYGG-----P--GNVAV--EDVPDPKIEHP-TDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMGEVEEV   68 (375)
T ss_pred             CceEEEec-----C--CceeE--EeCCCCCCCCC-CeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEEEEEEe
Confidence            57888754     3  23444  44666643467 9999999999999999999888654  34578999999999    


Q ss_pred             -eCCCCCCCCCEEEe----------------------------------------ccceeeEEEecCc--cceeeccCCC
Q 037444           86 -LHIQNYAKDDLVWG----------------------------------------STGWEEYSLVTAP--QLLIKIQHTD  122 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~~~~i~p~~  122 (339)
                       +++..+++||+|++                                        .|+|++|+.++.+  . ++++ |++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~-~~~l-P~~  146 (375)
T cd08282          69 GSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFN-LLKL-PDR  146 (375)
T ss_pred             CCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCc-EEEC-CCC
Confidence             66778999999986                                        1679999999975  6 9999 999


Q ss_pred             CCccc--cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC
Q 037444          123 VPLSY--YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD  199 (339)
Q Consensus       123 ~~~~~--~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~  199 (339)
                      ++...  .+++++.++++||+++ ...++++|++|+|.| .|++|++++|+|+.+|+ +|+++.+++++.+.++ ++|+ 
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-  222 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIGA-  222 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-
Confidence            55542  2567888999999999 778999999999976 59999999999999998 8999888999989888 8998 


Q ss_pred             eeeeCCChhhHHHHHHHhCCCCccEEEECCChh------------hHHHHHHhhccCCEEEEEecccccCCCC-------
Q 037444          200 DAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK------------MLDAVLLNMRLRGRIAVCGMISQYNLEK-------  260 (339)
Q Consensus       200 ~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------  260 (339)
                      ..+++.+. ++.+.+++.+++++|++|||+|+.            .+..++++++++|+++.+|.........       
T Consensus       223 ~~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~  301 (375)
T cd08282         223 IPIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQ  301 (375)
T ss_pred             eEeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccC
Confidence            45677765 788888887766899999999975            4889999999999998887643211100       


Q ss_pred             CccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          261 PEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .........++.++..+.+....     ..+.+++++++++++.+.+.  +..+++++++++|++.+.++. .+|+|+++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         302 GELSFDFGLLWAKGLSFGTGQAP-----VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             ccccccHHHHHhcCcEEEEecCC-----chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            01122334445555554443221     25668889999999999863  677899999999999999888 88999863

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=3.7e-34  Score=258.56  Aligned_cols=297  Identities=18%  Similarity=0.166  Sum_probs=239.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++...       ..+.++  ++|.|.+.++ ++|+||+.++++|+.|+....|.+.  ..+|.++|+|++|+    
T Consensus         1 ~~a~~~~~~-------~~~~~~--~~~~p~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~v   68 (344)
T cd08284           1 MKAVVFKGP-------GDVRVE--EVPIPQIQDP-TDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVGEVVEV   68 (344)
T ss_pred             CeeEEEecC-------CCceEE--eccCCCCCCC-CeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEEEEEee
Confidence            578888653       234554  4555644347 9999999999999999988877543  34578899999999    


Q ss_pred             -eCCCCCCCCCEEEec----------------------------------cceeeEEEecCc--cceeeccCCCCCcccc
Q 037444           86 -LHIQNYAKDDLVWGS----------------------------------TGWEEYSLVTAP--QLLIKIQHTDVPLSYY  128 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~----------------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~~~~  128 (339)
                       ++++.+++||+|++.                                  |+|++|+.++++  . ++++ |++++.. +
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~~-p~~l~~~-~  145 (344)
T cd08284          69 GPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGT-LLKL-PDGLSDE-A  145 (344)
T ss_pred             CCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCc-eEEC-CCCCCHH-H
Confidence             678889999999972                                  789999999964  6 9999 9995554 6


Q ss_pred             ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          129 TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      ++++++.++|||+++.. .++++|++|+|+| +|.+|++++++|+.+|+ +|+++++++++.+.++ ++|+. .++.+..
T Consensus       146 a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~  221 (344)
T cd08284         146 ALLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFEDA  221 (344)
T ss_pred             hhhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCCc
Confidence            88899999999999954 8899999999997 69999999999999997 8999988888888888 89975 4666665


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                       ++...+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|......     ........+.+++++.+...   
T Consensus       222 -~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~---  292 (344)
T cd08284         222 -EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEE-----FPFPGLDAYNKNLTLRFGRC---  292 (344)
T ss_pred             -CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCC-----ccccHHHHhhcCcEEEEecC---
Confidence             788888888876 89999999996 58889999999999999998754321     12334556677777654321   


Q ss_pred             cchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          286 YHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       286 ~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                        ...+.++++++++.++.+++  .+..++++++++++++.+.+++. ||+|++
T Consensus       293 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         293 --PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             --CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence              23667889999999999875  35667899999999999988877 899985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-34  Score=255.94  Aligned_cols=306  Identities=24%  Similarity=0.310  Sum_probs=251.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+  ..+.+..  .+.| ++.+ ++|+|++.++++|++|+..+.|.......+|.++|||++|+    
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~   72 (342)
T cd08266           1 MKAVVIRGH--GGP--EVLEYGD--LPEP-EPGP-DEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAV   72 (342)
T ss_pred             CeEEEEecC--CCc--cceeEee--cCCC-CCCC-CeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEe
Confidence            578888754  555  4455554  4444 4577 99999999999999999988875432234578899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.|++||+|++.                              |++++|+.++.+. ++++ |++++.. +++.++.
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~~~  149 (342)
T cd08266          73 GPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARN-LLPI-PDNLSFE-EAAAAPL  149 (342)
T ss_pred             CCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHH-ceeC-CCCCCHH-HHHhhhh
Confidence             567789999999874                              5789999999988 9999 9985555 6778888


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .+.+|++++.+..++.++++++|+|+++++|++++++++..|++|+++++++++.+.++ .++.+.+++.... ++.+.+
T Consensus       150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~  227 (342)
T cd08266         150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVREV  227 (342)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHH
Confidence            99999999988889999999999999999999999999999999999999999888887 7888777877665 777777


Q ss_pred             HHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHH
Q 037444          215 KRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL  293 (339)
Q Consensus       215 ~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (339)
                      ...+.+ ++|+++++.|...+..++++++++|+++.++.....     .........+.+++++.+.....     ...+
T Consensus       228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  297 (342)
T cd08266         228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAEL  297 (342)
T ss_pred             HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHH
Confidence            777665 899999999998889999999999999999875432     11233345567788877766544     5678


Q ss_pred             HHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       294 ~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .+++++++++.+.+.+...|+++++++|++.+.++...+|+++++
T Consensus       298 ~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         298 DEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            889999999998877777899999999999999888889999864

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=3.6e-34  Score=258.25  Aligned_cols=300  Identities=19%  Similarity=0.196  Sum_probs=234.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~--   85 (339)
                      ||++++.+.  ++    .+++.  +.|.| ++++ +||+||+.++++|++|+.++.+...  ....+|.++|||++|+  
T Consensus         1 ~~~~~~~~~--~~----~~~~~--~~~~p-~~~~-~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~   70 (341)
T PRK05396          1 MKALVKLKA--EP----GLWLT--DVPVP-EPGP-NDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVV   70 (341)
T ss_pred             CceEEEecC--CC----ceEEE--ECCCC-CCCC-CeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEE
Confidence            588888775  32    24554  45556 4578 9999999999999999987665321  1224577899999999  


Q ss_pred             ---eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCcccccccc
Q 037444           86 ---LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l  132 (339)
                         ++++.+++||+|++.                              |+|++|+.++++. ++++ |++++.  +.+++
T Consensus        71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-P~~l~~--~~~~~  146 (341)
T PRK05396         71 EVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFN-VWKI-PDDIPD--DLAAI  146 (341)
T ss_pred             EeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHH-eEEC-cCCCCH--HHhHh
Confidence               678889999999974                              7899999999998 9999 999554  33345


Q ss_pred             CchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          133 GMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      ..++.++++++..  ..++|++|+|.| +|++|++++|+|+.+|+ +|+++.+++++.+.++ ++|++++++++.. ++.
T Consensus       147 ~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~  221 (341)
T PRK05396        147 FDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLR  221 (341)
T ss_pred             hhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHH
Confidence            5677777776633  346899999987 59999999999999999 6888888888888888 8999999988876 888


Q ss_pred             HHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchh
Q 037444          212 AALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY  289 (339)
Q Consensus       212 ~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
                      +.++.++.+ ++|++|||.|+ ..+..++++|+++|+++.+|.....      .......+..+++++.++....    .
T Consensus       222 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~  291 (341)
T PRK05396        222 DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD------MAIDWNKVIFKGLTIKGIYGRE----M  291 (341)
T ss_pred             HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------CcccHHHHhhcceEEEEEEccC----c
Confidence            888888876 99999999986 5788999999999999999875421      1122455666777776654222    1


Q ss_pred             HHHHHHHHHHHHcC-CceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          290 PKFLELVIPAIREG-KMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       290 ~~~l~~~~~~l~~g-~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .+.+..++++++++ ++.+.+...++++++++|++.+.++. .||++++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        292 FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            23456788889888 45555667789999999999998877 799999874

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.9e-34  Score=258.89  Aligned_cols=297  Identities=19%  Similarity=0.164  Sum_probs=234.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--------CCCCCCCCCCe
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--------SFVDSFHPGEL   81 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--------~~~~p~~~G~e   81 (339)
                      |||+++++.       ..+++++  .|.| ++++ ++|+||+.++++|++|+..+.|....        ...+|.++|||
T Consensus         1 mka~~~~~~-------~~~~~~~--~~~p-~~~~-~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e   69 (350)
T cd08256           1 MRAVVCHGP-------QDYRLEE--VPVP-RPGP-GEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHE   69 (350)
T ss_pred             CeeEEEecC-------CceEEEE--CCCC-CCCC-CeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcc
Confidence            589998653       2345654  5555 4577 99999999999999999888775311        01357789999


Q ss_pred             eEEe-----eCCC--CCCCCCEEEe--------------------------------ccceeeEEEecCccceeeccCCC
Q 037444           82 KFWI-----LHIQ--NYAKDDLVWG--------------------------------STGWEEYSLVTAPQLLIKIQHTD  122 (339)
Q Consensus        82 ~~G~-----~~v~--~~~~Gd~V~~--------------------------------~g~~~~~~~v~~~~~~~~i~p~~  122 (339)
                      ++|+     ++++  +|++||+|++                                .|+|++|+.++++..++++ |++
T Consensus        70 ~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P~~  148 (350)
T cd08256          70 FVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-PDD  148 (350)
T ss_pred             eeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-CCC
Confidence            9999     5677  8999999986                                2789999999988437899 999


Q ss_pred             CCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCee
Q 037444          123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDA  201 (339)
Q Consensus       123 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v  201 (339)
                      ++.. .++.+ .+++++|+++ +..++++|++|+| +++|++|++++++|+.+|++ ++++.+++++.+.++ ++|++++
T Consensus       149 ~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~v  223 (350)
T cd08256         149 IPPE-DAILI-EPLACALHAV-DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADVV  223 (350)
T ss_pred             CCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcEE
Confidence            5544 45566 8999999998 7789999999999 55699999999999999985 677778888888887 8999889


Q ss_pred             eeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHH-Hhcccccc
Q 037444          202 FNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQL-IGKRIRLE  278 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~  278 (339)
                      +++... ++.+.+.+.+++ ++|++||++|+ ..+..++++++++|+++.+|.....      .......+ ..+++++.
T Consensus       224 ~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~i~  296 (350)
T cd08256         224 LNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELDVL  296 (350)
T ss_pred             ecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccEEE
Confidence            888775 788888888877 89999999995 5788999999999999999864321      11122222 24566666


Q ss_pred             ceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          279 GFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       279 ~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ++....      ..+.++++++++|.+++.  +..+++++++++|++.+.+++..+|+++
T Consensus       297 ~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         297 GSHLGP------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             EeccCc------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            554322      357889999999999874  5677899999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=6.8e-34  Score=253.94  Aligned_cols=309  Identities=26%  Similarity=0.335  Sum_probs=252.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+  ..+.+..  .+.| ++.+ ++|+||+.++++|+.|+....+.+.....+|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~v   72 (323)
T cd05276           1 MKAIVIKEP--GGP--EVLELGE--VPKP-APGP-GEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAV   72 (323)
T ss_pred             CeEEEEecC--CCc--ccceEEe--cCCC-CCCC-CEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEee
Confidence            689999876  555  4455544  4444 4577 99999999999999999888775543334578999999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       +++..+++||+|+++   |+|++|+.++.+. ++++ |++++.. ++++++.++.++|+++.+...+.++++++|+|++
T Consensus        73 g~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~  149 (323)
T cd05276          73 GPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQ-LLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGA  149 (323)
T ss_pred             CCCCCCCCCCCEEEEecCCCceeEEEEcCHHH-hccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence             566779999999987   7899999999988 9999 9985544 6778999999999999887889999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLN  240 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~  240 (339)
                      |++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+.+...+.+ ++|++||+.|+..+..++++
T Consensus       150 ~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~  227 (323)
T cd05276         150 SGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRA  227 (323)
T ss_pred             ChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence            99999999999999999999999999989887 8998888888776 788888887766 89999999998888899999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      ++++|+++.++..+...     .......++.+++++.++.....     +......+.++++++.++.+.+.....|++
T Consensus       228 ~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (323)
T cd05276         228 LAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPL  302 (323)
T ss_pred             hccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcH
Confidence            99999999998654321     12234445578888877765432     222345677888999999998777778899


Q ss_pred             ccHHHHHHHhHcCCccceEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ++++++++.+.++...||+++
T Consensus       303 ~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         303 EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHHHHHHHHHhCCCcceEeC
Confidence            999999999998888888774

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3e-34  Score=258.23  Aligned_cols=293  Identities=19%  Similarity=0.150  Sum_probs=238.7

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      |+++.++.  +    +++.+++  .|.| ++++ +||+|||.++++|++|++.+.+... ...+|.++|||++|+     
T Consensus         1 ~~~~~~~~--~----~~~~~~~--~~~p-~~~~-~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~V~~vG   69 (337)
T cd05283           1 KGYAARDA--S----GKLEPFT--FERR-PLGP-DDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVVAVG   69 (337)
T ss_pred             CceEEecC--C----CCceEEe--ccCC-CCCC-CeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceeeEEEEEC
Confidence            45666664  2    3455555  5555 4577 9999999999999999998887653 234578999999999     


Q ss_pred             eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCCCCccc
Q 037444           86 LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSY  127 (339)
Q Consensus        86 ~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~  127 (339)
                      +++++|++||+|+.                                      .|+|++|+.++++. ++++ |++++.. 
T Consensus        70 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-  146 (337)
T cd05283          70 SKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERF-VFKI-PEGLDSA-  146 (337)
T ss_pred             CCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhh-eEEC-CCCCCHH-
Confidence            67788999999972                                      26899999999998 9999 9996555 


Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      +++.+++.+.+||+++.+ ..+++|++++|.| .|++|++++++|+.+|++|+++++++++.+.++ ++|++.+++....
T Consensus       147 ~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~  223 (337)
T cd05283         147 AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP  223 (337)
T ss_pred             HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch
Confidence            677899999999999855 4689999999976 699999999999999999999999999999998 8999888877654


Q ss_pred             hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY  286 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
                       +....    ..+++|++|||+|+. .+..++++++++|+++.+|.....      ...+...++.+++++.++....  
T Consensus       224 -~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~--  290 (337)
T cd05283         224 -EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG--  290 (337)
T ss_pred             -hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC--
Confidence             33221    234899999999986 589999999999999999875432      1234455677899888877665  


Q ss_pred             chhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          287 HLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                         .+.++.++++++++++++.+ ..++++++++|++.+.+++..||+|++
T Consensus       291 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         291 ---RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ---HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence               56788899999999998754 568999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6e-34  Score=256.34  Aligned_cols=307  Identities=18%  Similarity=0.138  Sum_probs=245.1

Q ss_pred             cceEEEeeccCCCCC-CCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444           10 NKRVILSNYVTGFPK-ESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~-~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      |||+++++.  +.+. +.+  +...++|.|. +.+ ++|+||+.++++|++|+..+.+..+ ...+|.++|||++|+   
T Consensus         1 ~~~~~~~~~--~~~~~~~~--~~~~~~~~~~-~~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~   73 (336)
T cd08252           1 MKAIGFTQP--LPITDPDS--LIDIELPKPV-PGG-RDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASGVVEA   73 (336)
T ss_pred             CceEEecCC--CCCCcccc--eeEccCCCCC-CCC-CEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEEEEEE
Confidence            578999887  6652 113  4444566663 467 9999999999999999988777543 234567899999999   


Q ss_pred             --eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCC-----C
Q 037444           86 --LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKK-----G  152 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~-----g  152 (339)
                        +++..|++||+|++.      |+|++|+.++.+. ++++ |++++.. +++.++..+.+||+++.+...+++     |
T Consensus        74 ~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g  150 (336)
T cd08252          74 VGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERI-VGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEG  150 (336)
T ss_pred             cCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHH-eeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCC
Confidence              667789999999986      6899999999988 9999 9986555 677889999999999888888887     9


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      ++|+|+|++|++|++++++|+.+| ++|+++++++++.+.++ ++|++++++...  ++.++++....+++|++|||+|+
T Consensus       151 ~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~  227 (336)
T cd08252         151 KTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDT  227 (336)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCc
Confidence            999999999999999999999999 89999999999999998 899988888763  56667765443489999999995


Q ss_pred             -hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cc--hhHHHHHHHHHHHHcC
Q 037444          232 -KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YH--LYPKFLELVIPAIREG  303 (339)
Q Consensus       232 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~l~~~~~~l~~g  303 (339)
                       ..+..++++++++|+++.+|...        .......++.+++++.+..+...     +.  .....++++++++.+|
T Consensus       228 ~~~~~~~~~~l~~~g~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (336)
T cd08252         228 DQHWDAMAELIAPQGHICLIVDPQ--------EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAG  299 (336)
T ss_pred             HHHHHHHHHHhcCCCEEEEecCCC--------CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCC
Confidence             68899999999999999998642        11223334467777776554321     11  3346788899999999


Q ss_pred             Cceeeeee---eeCcccHHHHHHHhHcCCccceEEEE
Q 037444          304 KMVYVEDI---AEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       304 ~~~~~~~~---~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .+.+....   .++++++++|++.+.++...||++++
T Consensus       300 ~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         300 KLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             CEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            99875332   36999999999999999888998863

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=7.4e-34  Score=256.50  Aligned_cols=299  Identities=20%  Similarity=0.200  Sum_probs=237.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +     .+.+++  .|.| ++.+ ++|+|||+++++|+.|+..+.+.+. ...+|.++|+|++|+    
T Consensus         1 ~~~~~~~~~--~-----~~~~~~--~~~~-~l~~-~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~   68 (343)
T cd08235           1 MKAAVLHGP--N-----DVRLEE--VPVP-EPGP-GEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEV   68 (343)
T ss_pred             CeEEEEecC--C-----ceEEEE--ccCC-CCCC-CeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEee
Confidence            588988775  3     245654  4445 4577 9999999999999999998877543 123467899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCcc----ceeeccCCCCCcccccc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQ----LLIKIQHTDVPLSYYTG  130 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~----~~~~i~p~~~~~~~~aa  130 (339)
                       ++++.|++||+|+++                              |+|++|+.++++.    .++++ |++++.. +++
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~~~~~~-~aa  146 (343)
T cd08235          69 GDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PDNVSFE-EAA  146 (343)
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CCCCCHH-HHH
Confidence             677789999999974                              7899999999641    28899 9995544 444


Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhh
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD  209 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  209 (339)
                      . ..++.+||+++.. .++++|++|+|+| +|++|++++|+|+..|++ |+++++++++.+.++ ++|.++++++++. +
T Consensus       147 ~-~~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~  221 (343)
T cd08235         147 L-VEPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-D  221 (343)
T ss_pred             h-hhHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-C
Confidence            4 4888999999954 5899999999997 699999999999999998 999999999999888 8999999988886 8


Q ss_pred             HHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc
Q 037444          210 LDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH  287 (339)
Q Consensus       210 ~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
                      +.+.++..+.+ ++|++|||+++ ..+..++++++++|+++.++.....+    ...........+++.+.++....   
T Consensus       222 ~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~---  294 (343)
T cd08235         222 LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITITGSYAAS---  294 (343)
T ss_pred             HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEEEEEecCC---
Confidence            88888888777 89999999996 48889999999999999988643321    11223344555666665544333   


Q ss_pred             hhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          288 LYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       288 ~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                        .+.++.++++++++.+.+  .+..+++++++.++++.+.+++ .||+|++
T Consensus       295 --~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         295 --PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             --hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence              466888999999999863  3566789999999999999988 8899873

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=5.1e-34  Score=257.31  Aligned_cols=297  Identities=20%  Similarity=0.176  Sum_probs=229.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC----------CCCCCCCCCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR----------PSFVDSFHPG   79 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~----------~~~~~p~~~G   79 (339)
                      |||+++...    +    ++++  +.|.| .+++ ++|+|||.++++|+.|++...|...          ....+|.++|
T Consensus         1 m~a~~~~~~----~----~~~~--~~~~p-~~~~-~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g   68 (341)
T cd08262           1 MRAAVFRDG----P----LVVR--DVPDP-EPGP-GQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLG   68 (341)
T ss_pred             CceEEEeCC----c----eEEE--ecCCC-CCCC-CeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccc
Confidence            578887542    2    4554  45556 4577 9999999999999999988877321          0123477899


Q ss_pred             CeeEEe-----eCCCC-CCCCCEEEec--------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           80 ELKFWI-----LHIQN-YAKDDLVWGS--------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        80 ~e~~G~-----~~v~~-~~~Gd~V~~~--------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                      +|++|+     +++++ |++||+|+++                    |+|++|+.++++. ++++ |++++.  +.++++
T Consensus        69 ~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~s~--~~a~~~  144 (341)
T cd08262          69 HEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEAL-LLRV-PDGLSM--EDAALT  144 (341)
T ss_pred             cceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHH-eEEC-CCCCCH--HHhhhh
Confidence            999999     56776 9999999985                    7899999999998 9999 999544  344477


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDA  212 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  212 (339)
                      .++++||+++ ..+++++|++|||+|+ |++|.+++|+|+.+|++ ++++++++++.+.++ ++|++++++++.. +..+
T Consensus       145 ~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~  220 (341)
T cd08262         145 EPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFA  220 (341)
T ss_pred             hhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHH
Confidence            8899999996 7789999999999974 99999999999999996 666777888888888 8999888887653 3222


Q ss_pred             ---HHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc
Q 037444          213 ---ALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH  287 (339)
Q Consensus       213 ---~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
                         .+...+.+ ++|++||++|+ ..+..++++++++|+++.+|......      .......+.+++++.+.....   
T Consensus       221 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~---  291 (341)
T cd08262         221 AWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD------NIEPALAIRKELTLQFSLGYT---  291 (341)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC------ccCHHHHhhcceEEEEEeccc---
Confidence               34444555 89999999997 47889999999999999998753211      112222244666655433322   


Q ss_pred             hhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          288 LYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       288 ~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                        .+.++++++++++|.+.+.  +...+++++++++++.+.+++..||+|++
T Consensus       292 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         292 --PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             --HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence              4568889999999999753  46778999999999999999989999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.3e-33  Score=251.75  Aligned_cols=308  Identities=25%  Similarity=0.295  Sum_probs=249.6

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      ||+.+...  +.+  ..+.+..  .+.| ++.+ ++|+|+|.++++|+.|+....+.+.  ..+|.++|||++|+     
T Consensus         1 ~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~~g   70 (320)
T cd05286           1 KAVRIHKT--GGP--EVLEYED--VPVP-EPGP-GEVLVRNTAIGVNFIDTYFRSGLYP--LPLPFVLGVEGAGVVEAVG   70 (320)
T ss_pred             CeEEEecC--CCc--cceEEee--cCCC-CCCC-CEEEEEEEEeecCHHHHHHhcCCCC--CCCCccCCcceeEEEEEEC
Confidence            46666554  444  3445544  4444 4577 9999999999999999988877543  24567899999999     


Q ss_pred             eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCc
Q 037444           86 LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG  162 (339)
Q Consensus        86 ~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g  162 (339)
                      +++.++++||+|+++   |++++|+.++.+. ++++ |++++.. +++.++..+.+|++++.+..++++|++|+|+|++|
T Consensus        71 ~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g  147 (320)
T cd05286          71 PGVTGFKVGDRVAYAGPPGAYAEYRVVPASR-LVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAG  147 (320)
T ss_pred             CCCCCCCCCCEEEEecCCCceeEEEEecHHH-ceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence            567789999999985   6899999999988 9999 9986554 57788999999999998888999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhh
Q 037444          163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       163 ~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l  241 (339)
                      ++|++++++|+.+|++|+++++++++.+.++ ++|++++++.... ++.+.++..+.+ ++|++|||+++.....+++++
T Consensus       148 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l  225 (320)
T cd05286         148 GVGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSL  225 (320)
T ss_pred             hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence            9999999999999999999999999999998 8999888887775 788888888876 899999999998888999999


Q ss_pred             ccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc---cchhHHHHHHHHHHHHcCCceeeeeeeeCcccH
Q 037444          242 RLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVEDIAEGLENA  318 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~  318 (339)
                      +++|+++.+|.....     ........+..+++++.+.....+   +....+.+.++++++.++.+.+.....|+++++
T Consensus       226 ~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  300 (320)
T cd05286         226 RPRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADA  300 (320)
T ss_pred             ccCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHH
Confidence            999999999874321     112233334477777765543332   233456678899999999988766677899999


Q ss_pred             HHHHHHhHcCCccceEEEEe
Q 037444          319 PAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       319 ~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++.+.++...||+++++
T Consensus       301 ~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         301 AQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             HHHHHHHHcCCCCceEEEeC
Confidence            99999999988889998863

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-33  Score=254.06  Aligned_cols=297  Identities=25%  Similarity=0.260  Sum_probs=238.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++...  +++    +.++  +.|.| ++.+ ++|+|+|+++++|+.|++...|.... ...|.++|+|++|+    
T Consensus         1 m~a~~~~~~--~~~----~~~~--~~~~p-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~   69 (332)
T cd08259           1 MKAAILHKP--NKP----LQIE--EVPDP-EPGP-GEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEV   69 (332)
T ss_pred             CeEEEEecC--CCc----eEEE--EccCC-CCCC-CeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEE
Confidence            588888763  222    4454  45666 4577 99999999999999999988775432 34467899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.+++||+|+++                              |+|++|+.++.+. ++++ |++++.. +++.+++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~~~~~~~  146 (332)
T cd08259          70 GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERS-LVKL-PDNVSDE-SAALAAC  146 (332)
T ss_pred             CCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhh-eEEC-CCCCCHH-HHhhhcc
Confidence             677889999999974                              5799999999988 9999 9996555 6788899


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      ++.+||+++.. +.++++++++|+|++|++|++++++++..|++|+++++++++.+.++ +++.+.+++..   ++.+.+
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~  221 (332)
T cd08259         147 VVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSEDV  221 (332)
T ss_pred             HHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHHHH
Confidence            99999999966 89999999999999999999999999999999999999988888887 88887777543   344555


Q ss_pred             HHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          215 KRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                      ....  ++|++++++|......++++++++|+++.++......     ..........++.++.++...     ..+.++
T Consensus       222 ~~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  289 (332)
T cd08259         222 KKLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSISA-----TKADVE  289 (332)
T ss_pred             Hhcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecCC-----CHHHHH
Confidence            5443  6999999999888899999999999999998744321     111222233456665554322     256788


Q ss_pred             HHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          295 LVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       295 ~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      +++++++++.+.+.+..+++++++++|++.+.+++..||++++
T Consensus       290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            9999999999987777789999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-33  Score=254.08  Aligned_cols=308  Identities=22%  Similarity=0.225  Sum_probs=238.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      +||+++.+.  +.|  ..+++.+.  +.| .+.+ ++|+|++.++++|+.|+..+.+.......+|.++|+|++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~~--~~~-~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~v   72 (331)
T cd08273           1 NREVVVTRR--GGP--EVLKVVEA--DLP-EPAA-GEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDAL   72 (331)
T ss_pred             CeeEEEccC--CCc--ccEEEecc--CCC-CCCC-CeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEe
Confidence            488999887  766  44555554  445 3477 99999999999999999988876543234678999999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       ++++.|++||+|+++   |+|++|+.++.+. ++++ |++++.. +++.++.++.+||+++.+.+.+.+|++|+|+|++
T Consensus        73 G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  149 (331)
T cd08273          73 GSGVTGFEVGDRVAALTRVGGNAEYINLDAKY-LVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS  149 (331)
T ss_pred             CCCCccCCCCCEEEEeCCCcceeeEEEechHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence             678889999999996   7999999999998 9999 9996655 6778999999999999887889999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l  241 (339)
                      |++|++++++|+..|++|++++. +++.+.++ ++|+.. ++.... ++...  ....+++|+++||+|+..+..+++++
T Consensus       150 g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l  223 (331)
T cd08273         150 GGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAAL  223 (331)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHHHh
Confidence            99999999999999999999997 88888887 898753 455443 44443  33334899999999998889999999


Q ss_pred             ccCCEEEEEecccccCCCCCccccch------------HHHHhccccccceecccc--cchhHHHHHHHHHHHHcCCcee
Q 037444          242 RLRGRIAVCGMISQYNLEKPEGVHNL------------EQLIGKRIRLEGFLAGDY--YHLYPKFLELVIPAIREGKMVY  307 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~l~~g~~~~  307 (339)
                      +++|+++.+|.....+.. . .....            ...+.++++..+......  +....+.++++++++++|.+.+
T Consensus       224 ~~~g~~v~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~  301 (331)
T cd08273         224 APGGTLVCYGGNSSLLQG-R-RSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP  301 (331)
T ss_pred             cCCCEEEEEccCCCCCCc-c-ccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC
Confidence            999999999875432110 0 00000            011112222222221110  2334578899999999999987


Q ss_pred             eeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          308 VEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       308 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      .+...+++++++++++.+.++...||+|+
T Consensus       302 ~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         302 KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            77777899999999999998888888885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.3e-33  Score=255.66  Aligned_cols=314  Identities=21%  Similarity=0.259  Sum_probs=235.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--------------CCCCCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--------------PSFVDS   75 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--------------~~~~~p   75 (339)
                      |||++++++  |.|+ +.+.++  +.|.|.+.++ ++|+|||.++++|++|+....+...              .....|
T Consensus         1 ~~a~~~~~~--~~~~-~~~~~~--~~~~p~~~~~-~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p   74 (350)
T cd08248           1 MKAWQIHSY--GGID-SLLLLE--NARIPVIRKP-NQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFP   74 (350)
T ss_pred             CceEEeccc--CCCc-ceeeec--ccCCCCCCCC-CeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCC
Confidence            688988887  7662 234554  4555533247 9999999999999999988877321              023457


Q ss_pred             CCCCCeeEEe-----eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHH
Q 037444           76 FHPGELKFWI-----LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLY  144 (339)
Q Consensus        76 ~~~G~e~~G~-----~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~  144 (339)
                      .++|||++|+     +++..|++||+|+++      |+|++|+.++++. ++++ |++++.. .++.+++.+.+||+++.
T Consensus        75 ~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~  151 (350)
T cd08248          75 LTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENE-VSKK-PKNLSHE-EAASLPYAGLTAWSALV  151 (350)
T ss_pred             eeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHH-eecC-CCCCCHH-HHhhchhHHHHHHHHHH
Confidence            8999999999     677789999999984      7899999999998 9999 9996554 67789999999999997


Q ss_pred             HhcCCCC----CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKK----GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~----g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      +...+.+    |++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++ ++|++++++.... ++.+.+...  +
T Consensus       152 ~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~  226 (350)
T cd08248         152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--G  226 (350)
T ss_pred             HhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--C
Confidence            7777754    9999999999999999999999999999998865 5667777 8999888887765 555555432  3


Q ss_pred             CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCC-Ccc-ccchHHHHhcccccccee----c-ccccchhHHHH
Q 037444          221 GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEK-PEG-VHNLEQLIGKRIRLEGFL----A-GDYYHLYPKFL  293 (339)
Q Consensus       221 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~l  293 (339)
                      ++|++||++|+..+..++++++++|+++.+|.....+... ... .............+....    . ..........+
T Consensus       227 ~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (350)
T cd08248         227 KFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSAL  306 (350)
T ss_pred             CCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHH
Confidence            7999999999888899999999999999998643221100 000 000001111111111110    0 00012235678


Q ss_pred             HHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       294 ~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      .++++++.+|.+.+.+...+++++++++++.+.++...+|++++
T Consensus       307 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         307 DELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            99999999999987777789999999999999988878888863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2.5e-33  Score=253.88  Aligned_cols=315  Identities=19%  Similarity=0.177  Sum_probs=233.5

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      |++++.+.  ++|    +.++..+.|.|.++++ ++|+||+.++++|++|+..+.+........|.++|+|++|+     
T Consensus         2 ~~~~~~~~--~~~----~~~~~~~~~~p~~~~~-~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG   74 (352)
T cd08247           2 KALTFKNN--TSP----LTITTIKLPLPNCYKD-NEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVG   74 (352)
T ss_pred             ceEEEecC--CCc----ceeeccCCCCCCCCCC-CeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeC
Confidence            67888876  667    3677777776644588 99999999999999999876542211112367899999999     


Q ss_pred             eCCC-CCCCCCEEEec--------cceeeEEEecCc----cceeeccCCCCCccccccccCchhhhHHHHHHHhc-CCCC
Q 037444           86 LHIQ-NYAKDDLVWGS--------TGWEEYSLVTAP----QLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVC-SPKK  151 (339)
Q Consensus        86 ~~v~-~~~~Gd~V~~~--------g~~~~~~~v~~~----~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~-~~~~  151 (339)
                      ++++ +|++||+|+++        |+|++|+++++.    . ++++ |++++.. +++.++..+.+||+++.+.. ++++
T Consensus        75 ~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~  151 (352)
T cd08247          75 SNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKS-ITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLGP  151 (352)
T ss_pred             cccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccce-eEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccCC
Confidence            6777 89999999985        689999999987    5 8999 9986555 68888999999999997766 7999


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh---HHHHHHH-hCCC-CccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLA-GC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD---LDAALKR-CFPQ-GIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~-ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~v~~-~~~g-~~d~  224 (339)
                      |++|+|+|+++.+|++++++|+.+ |+ .|+++. ++++.+.++ ++|++++++..+. +   +..++.+ .+++ ++|+
T Consensus       152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~d~  228 (352)
T cd08247         152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKFDL  228 (352)
T ss_pred             CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCceE
Confidence            999999999999999999999987 55 677776 556666776 8999888887665 4   4444444 4424 8999


Q ss_pred             EEECCCh-hhHHHHHHhhc---cCCEEEEEecccccCCCCCc-----cccchHHHHhccccccceecccc-cchhHHHHH
Q 037444          225 YFENVGG-KMLDAVLLNMR---LRGRIAVCGMISQYNLEKPE-----GVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLE  294 (339)
Q Consensus       225 vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~  294 (339)
                      +|||+|+ .....++++++   ++|+++.++.....+.....     ........+.++.++........ .....+.++
T Consensus       229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (352)
T cd08247         229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIE  308 (352)
T ss_pred             EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHH
Confidence            9999998 57889999999   99999987532111000000     00000111223333332222111 111135688


Q ss_pred             HHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          295 LVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       295 ~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++.++.+.+.+...++++++++|++.+.+++..||+++++
T Consensus       309 ~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         309 KCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             HHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence            89999999999877777889999999999999998899999874

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.5e-33  Score=247.81  Aligned_cols=305  Identities=23%  Similarity=0.290  Sum_probs=246.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.+  +.+.+..  .+.| ++.+ ++|+|++.++++|++|+....+........|.++|+|++|+    
T Consensus         1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~   72 (326)
T cd08272           1 MKALVLESF--GGP--EVFELRE--VPRP-QPGP-GQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAV   72 (326)
T ss_pred             CeEEEEccC--CCc--hheEEee--cCCC-CCCC-CeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEe
Confidence            689999876  666  3455654  4444 4577 99999999999999999887775432223367899999999    


Q ss_pred             -eCCCCCCCCCEEEec--------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 -LHIQNYAKDDLVWGS--------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                       +++..|++||+|+++        |+|++|+.++++. ++++ |++++.. .++.++..+.+||+++.+..++++|++++
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~vl  149 (326)
T cd08272          73 GEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARL-LALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTVL  149 (326)
T ss_pred             CCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHH-cccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEEE
Confidence             566789999999985        6899999999988 9999 9985554 57788899999999988889999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|++|.+|++++++|+..|++|++++++ ++.+.++ ++|++.+++...  .+.+.++..+.+ ++|+++||+++....
T Consensus       150 i~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~  225 (326)
T cd08272         150 IHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGETLD  225 (326)
T ss_pred             EEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHHHH
Confidence            99999999999999999999999999988 8888887 899988887654  367778888777 899999999988888


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc--c----cchhHHHHHHHHHHHHcCCceeee
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD--Y----YHLYPKFLELVIPAIREGKMVYVE  309 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l~~~~~~l~~g~~~~~~  309 (339)
                      .++++++++|+++.++....         ........+++++.+.....  .    +....+.+.++++++.++.+.+.+
T Consensus       226 ~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  296 (326)
T cd08272         226 ASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLL  296 (326)
T ss_pred             HHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccc
Confidence            99999999999999876421         11122235677776665432  1    233456788899999999988765


Q ss_pred             e-eeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          310 D-IAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       310 ~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      . ..+++++++++++.+.++...+|+++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         297 DPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             ccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            4 7789999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1e-32  Score=246.77  Aligned_cols=311  Identities=24%  Similarity=0.286  Sum_probs=251.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+.+...  +.+  ..+.+..  .+.| ++++ ++++|+|.++++|+.|+....+.+.....+|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~l~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~v   72 (325)
T TIGR02824         1 MKAIEITEP--GGP--EVLVLVE--VPLP-VPKA-GEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAV   72 (325)
T ss_pred             CceEEEccC--CCc--ccceEEe--CCCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEe
Confidence            578887665  444  3444543  3334 4577 99999999999999999887765432233467899999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       +++..+++||+|+++   |+|++|+.++.+. ++++ |++++.. .+++++.++.+||+++.+...+++|++++|+|++
T Consensus        73 g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~  149 (325)
T TIGR02824        73 GEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQ-VLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGA  149 (325)
T ss_pred             CCCCCCCCCCCEEEEccCCCcceeEEEecHHH-cEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence             566779999999986   7899999999988 9999 9985544 6778999999999998788999999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLN  240 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~  240 (339)
                      |++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+.++....+ ++|+++|+.|+..+..++++
T Consensus       150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~  227 (325)
T TIGR02824       150 SGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA  227 (325)
T ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence            99999999999999999999999999888887 8998888877765 778888887776 89999999998888899999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      ++++|+++.+|.....+     .......++.+++++.+......     +......+.+++++++++.+.+.....+++
T Consensus       228 l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  302 (325)
T TIGR02824       228 LALDGRIVQIGFQGGRK-----AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPL  302 (325)
T ss_pred             hccCcEEEEEecCCCCc-----CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeH
Confidence            99999999998744321     12334455588998888775442     222345667788999999988766677899


Q ss_pred             ccHHHHHHHhHcCCccceEEEEe
Q 037444          316 ENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++++.+.++...||+++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       303 EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             HHHHHHHHHHHhCCCcceEEEeC
Confidence            99999999999888889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=7.3e-33  Score=250.19  Aligned_cols=298  Identities=17%  Similarity=0.188  Sum_probs=236.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++++.       ..+++.+  .|.|.+.++ +||+||+.++++|++|+..+.|...  ..+|.++|||++|+    
T Consensus         1 m~~~~~~~~-------~~~~~~~--~~~p~~~~~-~ev~V~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~~v   68 (345)
T cd08287           1 MRATVIHGP-------GDIRVEE--VPDPVIEEP-TDAVIRVVATCVCGSDLWPYRGVSP--TRAPAPIGHEFVGVVEEV   68 (345)
T ss_pred             CceeEEecC-------CceeEEe--CCCCCCCCC-CeEEEEEeeeeecccchhhhcCCCC--CCCCcccccceEEEEEEe
Confidence            688999764       2345554  555644477 9999999999999999988877543  23478999999999    


Q ss_pred             -eCCCCCCCCCEEEe-c-----------------------------cceeeEEEecCc--cceeeccCCCCCcccc----
Q 037444           86 -LHIQNYAKDDLVWG-S-----------------------------TGWEEYSLVTAP--QLLIKIQHTDVPLSYY----  128 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~~i~p~~~~~~~~----  128 (339)
                       ++++.+++||+|++ +                             |+|++|+.++.+  . ++++ |++++....    
T Consensus        69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~-~~~l-P~~l~~~~~~~~~  146 (345)
T cd08287          69 GSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGT-LVKV-PGSPSDDEDLLPS  146 (345)
T ss_pred             CCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCc-eEEC-CCCCChhhhhhhh
Confidence             67788999999986 1                             788999999974  6 9999 999654101    


Q ss_pred             ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          129 TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      .+++...+.+||+++ ...++++|++|+|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|+++++++...
T Consensus       147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~  223 (345)
T cd08287         147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE  223 (345)
T ss_pred             hHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc
Confidence            123446789999998 568899999999976 699999999999999995 888888877888888 8999999999876


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                       ++.+.+.+.+.+ ++|+++||+|+ ..+..++++++++|+++.+|.....      ........+.+++++.+....  
T Consensus       224 -~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~--  294 (345)
T cd08287         224 -EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRNVGLAGGPAP--  294 (345)
T ss_pred             -cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcceEEEEecCC--
Confidence             788888888776 99999999986 5889999999999999998764321      122333557788887664322  


Q ss_pred             cchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          286 YHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       286 ~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                         ..+.++++++++.++.+++  .+...++++++++|++.+.++... |++++
T Consensus       295 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  344 (345)
T cd08287         295 ---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR  344 (345)
T ss_pred             ---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence               2567899999999999886  356678999999999998876655 99885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-32  Score=246.51  Aligned_cols=311  Identities=23%  Similarity=0.282  Sum_probs=252.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+.+.+.  +.+  +.+.+..  .+.| ++.+ ++++|+|.++++|+.|.....+.......+|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~   72 (328)
T cd08268           1 MRAVRFHQF--GGP--EVLRIEE--LPVP-APGA-GEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAV   72 (328)
T ss_pred             CeEEEEecc--CCc--ceeEEee--cCCC-CCCC-CeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEee
Confidence            578888765  545  4455543  4444 4577 99999999999999999887775543344578899999999    


Q ss_pred             -eCCCCCCCCCEEEec--------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 -LHIQNYAKDDLVWGS--------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                       +++..|++||+|+++        |++++|+.++++. ++++ |++++.. +++.++.++.+||+++.....+.++++++
T Consensus        73 G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vl  149 (328)
T cd08268          73 GAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAA-VVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSVL  149 (328)
T ss_pred             CCCCCcCCCCCEEEeccccccCCCccceEEEEechHh-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence             667789999999986        6899999999998 9999 9985444 57789999999999998888999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|++|++|++++++++..|++|++++++.++.+.++ ++|.+.+++.... ++.+.+...+.+ ++|+++++.++....
T Consensus       150 i~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~  227 (328)
T cd08268         150 ITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFA  227 (328)
T ss_pred             EecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHhHH
Confidence            9999999999999999999999999999999989887 8898888887776 777788877766 899999999998888


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc---cchhHHHHHHHHHHHHcCCceeeeeee
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVEDIA  312 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~~~  312 (339)
                      .++++++++|+++.+|.....     .........+.+++++.++.....   +......++.+.+++.++.+.+.....
T Consensus       228 ~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (328)
T cd08268         228 KLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRV  302 (328)
T ss_pred             HHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccE
Confidence            999999999999999864321     112233335778888777665432   233455677778888889888776677


Q ss_pred             eCcccHHHHHHHhHcCCccceEEEEe
Q 037444          313 EGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       313 ~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++.++++.+..++..||+++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         303 FPFDDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             EcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            89999999999999888888999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.1e-33  Score=248.66  Aligned_cols=289  Identities=25%  Similarity=0.317  Sum_probs=228.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||++++...  + +  +.+.+..  .+.| ++++ +||+||+.++++|++|+....+..  ...+|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~-~--~~~~~~~--~~~~-~~~~-~ev~v~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~v   69 (325)
T cd08264           1 MKALVFEKS--G-I--ENLKVED--VKDP-KPGP-GEVLIRVKMAGVNPVDYNVINAVK--VKPMPHIPGAEFAGVVEEV   69 (325)
T ss_pred             CeeEEeccC--C-C--CceEEEe--ccCC-CCCC-CeEEEEEEEEEechHHHHHHhCCC--CCCCCeecccceeEEEEEE
Confidence            588888664  4 3  3455544  4545 4588 999999999999999998876421  123467899999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.|++||+|+++                              |+|++|+.++++. ++++ |++++.. +++.+++
T Consensus        70 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~~~~  146 (325)
T cd08264          70 GDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKN-LFKI-PDSISDE-LAASLPV  146 (325)
T ss_pred             CCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHH-ceeC-CCCCCHH-Hhhhhhh
Confidence             678889999999863                              6899999999998 9999 9996655 6888899


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .+.+||+++.. .++++|++|+|+|++|++|++++++|+.+|++|+++++    .+.++ ++|++++++.+.   ..+.+
T Consensus       147 ~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~---~~~~l  217 (325)
T cd08264         147 AALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE---VEEKV  217 (325)
T ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---HHHHH
Confidence            99999999955 89999999999999999999999999999999999873    26666 899988887643   34556


Q ss_pred             HHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          215 KRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                      ++.+ +++|+++|++|+..+..++++|+++|+++.+|.....     ....+...++.++.++.+.....     ++.++
T Consensus       218 ~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  286 (325)
T cd08264         218 KEIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT-----RKELL  286 (325)
T ss_pred             HHHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC-----HHHHH
Confidence            6666 6899999999998899999999999999999864211     12334455566677666655444     56788


Q ss_pred             HHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceE
Q 037444          295 LVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQ  334 (339)
Q Consensus       295 ~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  334 (339)
                      ++++++...+  ..+..+|+++++++|++.+.++...+|+
T Consensus       287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            8888886544  4456778999999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.1e-32  Score=247.90  Aligned_cols=294  Identities=24%  Similarity=0.300  Sum_probs=232.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +     .+.+.  +.|.| ++.+ ++|+|||+++++|+.|+....|...  ..+|.++|+|++|+    
T Consensus         1 ~~a~~~~~~--~-----~~~~~--~~~~~-~l~~-~~v~v~v~~~~l~~~d~~~~~g~~~--~~~p~~~g~~~~G~v~~v   67 (334)
T cd08234           1 MKALVYEGP--G-----ELEVE--EVPVP-EPGP-DEVLIKVAACGICGTDLHIYEGEFG--AAPPLVPGHEFAGVVVAV   67 (334)
T ss_pred             CeeEEecCC--C-----ceEEE--eccCC-CCCC-CeEEEEEEEEeEchhhhHHhcCCCC--CCCCcccccceEEEEEEe
Confidence            688988765  3     34554  45555 4577 9999999999999999998888654  23678999999999    


Q ss_pred             -eCCCCCCCCCEEEe------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++++.+++||+|++                              .|+|++|+.++++. ++++ |++++.. +++.+ .
T Consensus        68 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-~  143 (334)
T cd08234          68 GSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQ-VYKI-PDNLSFE-EAALA-E  143 (334)
T ss_pred             CCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHH-cEEC-cCCCCHH-HHhhh-h
Confidence             67778999999987                              27899999999998 9999 9996554 45444 7


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      ++.++++++ +..++++|++|+|+| .|.+|.+++++|+..|++ |+++++++++.+.++ ++|+++++++... +...+
T Consensus       144 ~~~~a~~~l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~  219 (334)
T cd08234         144 PLSCAVHGL-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ  219 (334)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH
Confidence            888999998 778999999999997 599999999999999997 899999999999887 8999888887765 55554


Q ss_pred             HHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          214 LKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                       +...++++|++|||+|. ..+..++++++++|+++.+|.....    .........++.+++++.+...      ....
T Consensus       220 -~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~  288 (334)
T cd08234         220 -KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI------NPYT  288 (334)
T ss_pred             -HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc------CHHH
Confidence             33333489999999985 6788999999999999999875431    1112233444456776666543      1456


Q ss_pred             HHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          293 LELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +++++++++++.+.+.  +..++++++++++++.+.+ ...||+++
T Consensus       289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         289 FPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            8889999999998753  5667899999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=9.1e-33  Score=249.09  Aligned_cols=299  Identities=21%  Similarity=0.219  Sum_probs=232.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~--   85 (339)
                      |||+++++.  |.    .+.+  .+.|.|. +++ ++++|||.++++|+.|+..+.+...  ....+|.++|+|++|+  
T Consensus         1 ~~~~~~~~~--~~----~~~~--~~~~~~~-~~~-~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   70 (341)
T cd05281           1 MKAIVKTKA--GP----GAEL--VEVPVPK-PGP-GEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVV   70 (341)
T ss_pred             CcceEEecC--CC----ceEE--EeCCCCC-CCC-CeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEE
Confidence            588888875  32    2445  4456563 477 9999999999999999887554321  1233567899999999  


Q ss_pred             ---eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCcccccccc
Q 037444           86 ---LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l  132 (339)
                         +++..+++||+|+++                              |+|++|++++++. ++++ |++++.  +++++
T Consensus        71 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~l-P~~~~~--~~a~~  146 (341)
T cd05281          71 EVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEEN-LWKN-DKDIPP--EIASI  146 (341)
T ss_pred             EECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHH-cEEC-cCCCCH--HHhhh
Confidence               567779999999873                              7899999999988 9999 998543  56678


Q ss_pred             CchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          133 GMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +.++.++++++.  ...++|++|+|.| +|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++++++++.. ++.
T Consensus       147 ~~~~~~a~~~~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~  221 (341)
T cd05281         147 QEPLGNAVHTVL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-DVV  221 (341)
T ss_pred             hhHHHHHHHHHH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-cHH
Confidence            888899998874  4568999999987 59999999999999999 7999988888888888 8999988887765 777


Q ss_pred             HHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchh
Q 037444          212 AALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY  289 (339)
Q Consensus       212 ~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
                       .+++.+++ ++|++|||+|+ .....++++|+++|+++.+|.....   ..  .........+++.+.++....    .
T Consensus       222 -~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~----~  291 (341)
T cd05281         222 -EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP---VD--IDLNNLVIFKGLTVQGITGRK----M  291 (341)
T ss_pred             -HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC---cc--cccchhhhccceEEEEEecCC----c
Confidence             88888776 99999999986 5788999999999999998864321   00  011123455666665544211    2


Q ss_pred             HHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          290 PKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       290 ~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .+.++++++++.++.+.+  .+...++++++++|++.+.+++ .||++++.
T Consensus       292 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         292 FETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             chhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            345778899999999863  3556789999999999999988 89999863

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.3e-33  Score=252.90  Aligned_cols=290  Identities=21%  Similarity=0.192  Sum_probs=226.5

Q ss_pred             eEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCC------CCCCCCCCCCCCeeEEe-----eCCCCCCCCCE
Q 037444           28 MKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD------RPSFVDSFHPGELKFWI-----LHIQNYAKDDL   96 (339)
Q Consensus        28 ~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~------~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~   96 (339)
                      +++  .+.|.| .+++ ++|+||+.++++|++|++.+.+..      .....+|.++|||++|+     ++++.|++||+
T Consensus        39 ~~~--~~~~~p-~~~~-~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~  114 (384)
T cd08265          39 LRV--EDVPVP-NLKP-DEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDP  114 (384)
T ss_pred             EEE--EECCCC-CCCC-CEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCE
Confidence            455  445666 3477 999999999999999998776321      11123578999999999     67778999999


Q ss_pred             EEe------------------------------ccceeeEEEecCccceeeccCCCCC-----ccccccccCchhhhHHH
Q 037444           97 VWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVP-----LSYYTGILGMPGVTAYA  141 (339)
Q Consensus        97 V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~-----~~~~aa~l~~~~~tA~~  141 (339)
                      |++                              .|+|++|+.++++. ++++ |++++     +.+++++++.++++||+
T Consensus       115 V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~-~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~  192 (384)
T cd08265         115 VTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARY-AWEI-NELREIYSEDKAFEAGALVEPTSVAYN  192 (384)
T ss_pred             EEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHH-eEEC-CccccccccCCCHHHhhhhhHHHHHHH
Confidence            985                              37899999999988 9999 88632     33357778889999999


Q ss_pred             HHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCCh--hhHHHHHHHh
Q 037444          142 GLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE--PDLDAALKRC  217 (339)
Q Consensus       142 ~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~v~~~  217 (339)
                      ++... .++++|++|+|+| +|++|++++++|+.+|+ +|+++++++++.+.++ ++|+++++++.+.  .++.+.+++.
T Consensus       193 al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~v~~~  270 (384)
T cd08265         193 GLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDCLSGEKVMEV  270 (384)
T ss_pred             HHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccccHHHHHHHh
Confidence            99766 6899999999996 69999999999999999 7999998888888888 8999888877631  1577788888


Q ss_pred             CCC-CccEEEECCCh--hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          218 FPQ-GIDIYFENVGG--KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       218 ~~g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                      +.+ ++|+|+|+.|+  ..+..++++|+++|+++.+|.....      .......+..+..++.+.....    ....++
T Consensus       271 ~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~~----~~~~~~  340 (384)
T cd08265         271 TKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGHS----GHGIFP  340 (384)
T ss_pred             cCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeeccC----CcchHH
Confidence            887 89999999996  3778999999999999999864321      1122334445555555543211    244688


Q ss_pred             HHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          295 LVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       295 ~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +++++++++.+++.  +..+|+++++++|++.+.++ ..||+|+
T Consensus       341 ~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         341 SVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             HHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            89999999999864  55678999999999996555 5778875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=6.3e-33  Score=245.80  Aligned_cols=284  Identities=19%  Similarity=0.241  Sum_probs=233.0

Q ss_pred             CCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec-----cceeeEEEec
Q 037444           41 EGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS-----TGWEEYSLVT  110 (339)
Q Consensus        41 ~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~-----g~~~~~~~v~  110 (339)
                      +.+ ++++||+.++++|+.|+..+.+.+.....+|.++|+|++|+     +++.++++||+|+++     |+|++|+.++
T Consensus         5 ~~~-~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~   83 (303)
T cd08251           5 PGP-GEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVP   83 (303)
T ss_pred             CCC-CEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEcc
Confidence            466 89999999999999999988876543335678999999999     677889999999986     7899999999


Q ss_pred             CccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 037444          111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD  190 (339)
Q Consensus       111 ~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~  190 (339)
                      ++. ++++ |++++.. +++.++..+.+||+++ +...+++|++++|++++|.+|++++|+|+.+|++|+++++++++.+
T Consensus        84 ~~~-~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  159 (303)
T cd08251          84 EDQ-VVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE  159 (303)
T ss_pred             HHH-eEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            998 9999 9996555 6888999999999998 5789999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHH
Q 037444          191 LLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQ  269 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  269 (339)
                      .++ ++|++.+++.... ++.+.+...+++ ++|+++|++++.....++++++++|+++.++......    ...... .
T Consensus       160 ~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~-~  232 (303)
T cd08251         160 YLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVDL-S  232 (303)
T ss_pred             HHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccCh-h
Confidence            997 8999999988876 888888888877 8999999999888889999999999999988643211    011111 2


Q ss_pred             HHhccccccceecccc----cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          270 LIGKRIRLEGFLAGDY----YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       270 ~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      .+.+++.+....+...    +....+.+.++.+++++|.+++.....+++++++++++.+.+++..||+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         233 VLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            2333333332222111    233456688899999999998777777899999999999998888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.1e-32  Score=248.50  Aligned_cols=288  Identities=20%  Similarity=0.213  Sum_probs=227.7

Q ss_pred             eEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEe-
Q 037444           28 MKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI-----LHIQNYAKDDLVWG-   99 (339)
Q Consensus        28 ~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~-   99 (339)
                      +++.  +.|.|. +++ +||+|||.++++|+.|+..+.+...  ....+|.++|+|++|+     +++++|++||+|++ 
T Consensus        11 ~~l~--~~~~p~-~~~-~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   86 (340)
T TIGR00692        11 AELT--EVPVPE-PGP-GEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVE   86 (340)
T ss_pred             cEEE--ECCCCC-CCC-CeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEEC
Confidence            4554  456663 477 9999999999999999987655321  1234567899999999     67888999999986 


Q ss_pred             -----------------------------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCC
Q 037444          100 -----------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPK  150 (339)
Q Consensus       100 -----------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  150 (339)
                                                   .|+|++|++++++. ++++ |++++.  +.++++.++.+|++++  ...++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~--~~a~~~~~~~~a~~~~--~~~~~  160 (340)
T TIGR00692        87 THIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQN-IWKN-PKSIPP--EYATIQEPLGNAVHTV--LAGPI  160 (340)
T ss_pred             CcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHH-cEEC-cCCCCh--HhhhhcchHHHHHHHH--HccCC
Confidence                                         27899999999998 9999 998544  4566888999999987  34578


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~  228 (339)
                      +|++++|.| +|++|++++|+|+.+|++ |+++.+++++.+.++ ++|++.++++... ++.+.+.+.+.+ ++|++|||
T Consensus       161 ~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~  237 (340)
T TIGR00692       161 SGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEM  237 (340)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEEC
Confidence            999999976 599999999999999996 888888888888888 8999888888776 888888888776 89999999


Q ss_pred             CCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCce-
Q 037444          229 VGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV-  306 (339)
Q Consensus       229 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~-  306 (339)
                      +|+ ..+...+++|+++|+++.+|..... .  . .. ....++.+++++.++..    ....+.+.+++++++++.++ 
T Consensus       238 ~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~--~-~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~  308 (340)
T TIGR00692       238 SGAPKALEQGLQAVTPGGRVSLLGLPPGK-V--T-ID-FTNKVIFKGLTIYGITG----RHMFETWYTVSRLIQSGKLDL  308 (340)
T ss_pred             CCCHHHHHHHHHhhcCCCEEEEEccCCCC-c--c-cc-hhhhhhhcceEEEEEec----CCchhhHHHHHHHHHcCCCCh
Confidence            885 5788999999999999999875321 0  1 11 12245556666655432    12245678899999999987 


Q ss_pred             -eeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          307 -YVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       307 -~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                       +.+...+++++++++++.+.+++. ||+++++
T Consensus       309 ~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       309 DPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             HHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence             345677899999999999998875 9999875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.7e-32  Score=247.56  Aligned_cols=286  Identities=17%  Similarity=0.171  Sum_probs=225.0

Q ss_pred             CeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCC-CC-CCCCCCCCCCeeEEe-----eCCCCCCCCCEEEe
Q 037444           27 DMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD-RP-SFVDSFHPGELKFWI-----LHIQNYAKDDLVWG   99 (339)
Q Consensus        27 ~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~-~~-~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~   99 (339)
                      .+.+++  .|.| .+.+ +||+|||.++++|+.|.+.+.+.. .. ...+|.++|+|++|+     +++..|++||+|++
T Consensus         9 ~~~~~~--~~~~-~l~~-~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   84 (343)
T cd05285           9 DLRLEE--RPIP-EPGP-GEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAI   84 (343)
T ss_pred             ceeEEE--CCCC-CCCC-CeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEE
Confidence            345554  5555 3477 999999999999999988664321 11 123467899999999     67788999999985


Q ss_pred             -------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcC
Q 037444          100 -------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCS  148 (339)
Q Consensus       100 -------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~  148 (339)
                                                     .|+|++|++++++. ++++ |++++.. +++.+ .++.+|++++ +.++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~~  159 (343)
T cd05285          85 EPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADF-CHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRAG  159 (343)
T ss_pred             ccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHH-cEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcC
Confidence                                           37899999999998 9999 9995544 45444 6889999997 7799


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH---HHHHHHhCCC-Ccc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL---DAALKRCFPQ-GID  223 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~~~v~~~~~g-~~d  223 (339)
                      +++|++|+|.| +|++|++++|+|+.+|++ |+++++++++.+.++ ++|++++++++.. ++   .+.+++.+.+ ++|
T Consensus       160 ~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d  236 (343)
T cd05285         160 VRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGKGPD  236 (343)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCCCCC
Confidence            99999999987 599999999999999997 999988899989888 8999999988765 54   7778887776 899


Q ss_pred             EEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHc
Q 037444          224 IYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIRE  302 (339)
Q Consensus       224 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  302 (339)
                      ++|||+|+. .+..++++++++|+++.+|.....      ...+......+++.+.++...      .+.++++++++++
T Consensus       237 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~  304 (343)
T cd05285         237 VVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANTYPTAIELLAS  304 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHHHHHHHHHHHc
Confidence            999999975 889999999999999999864321      122233445566665554321      2567889999999


Q ss_pred             CCce--eeeeeeeCcccHHHHHHHhHcCC-ccceEEE
Q 037444          303 GKMV--YVEDIAEGLENAPAALVGLFTGR-NVGKQLV  336 (339)
Q Consensus       303 g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv  336 (339)
                      +.+.  +.+..+++++++.+|++.+.+++ ..+|+++
T Consensus       305 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         305 GKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             CCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            9875  34566789999999999999875 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8e-32  Score=241.21  Aligned_cols=305  Identities=20%  Similarity=0.279  Sum_probs=241.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.  .+++.++.  .|.| ++.+ ++|+|||.++++|++|+..+.+... ...+|.++|||++|+    
T Consensus         1 ~~a~~~~~~--~~--~~~~~~~~--~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~~~   71 (325)
T cd08271           1 MKAWVLPKP--GA--ALQLTLEE--IEIP-GPGA-GEVLVKVHAAGLNPVDWKVIAWGPP-AWSYPHVPGVDGAGVVVAV   71 (325)
T ss_pred             CeeEEEccC--CC--cceeEEec--cCCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCC-CCCCCcccccceEEEEEEe
Confidence            689999875  32  12455654  5555 4577 9999999999999999988776542 123467899999999    


Q ss_pred             -eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           86 -LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                       +++..+++||+|+++      |+|++|+.++.+. ++++ |++++.. +++.+++++.+|++++.+.+++++|++++|+
T Consensus        72 G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~-~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~  148 (325)
T cd08271          72 GAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARA-VLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILIT  148 (325)
T ss_pred             CCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHH-eEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEE
Confidence             567789999999986      6899999999998 9999 9996555 6778999999999999888899999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHH
Q 037444          159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAV  237 (339)
Q Consensus       159 ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~  237 (339)
                      |+++++|++++++|+..|++|++++ ++++.+.+. .+|++.+++.... ++.+.++..+.+ ++|++++|.++.....+
T Consensus       149 g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~  225 (325)
T cd08271         149 GGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAAL  225 (325)
T ss_pred             CCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHHHH
Confidence            9999999999999999999999988 677778887 8999888887775 777888887776 89999999998877789


Q ss_pred             HHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc----c----chhHHHHHHHHHHHHcCCceeee
Q 037444          238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----Y----HLYPKFLELVIPAIREGKMVYVE  309 (339)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~l~~~~~~l~~g~~~~~~  309 (339)
                      +++++++|+++.++.....       .  ....+.+++.+....+...    +    ....+.+.+++++++++.+.+..
T Consensus       226 ~~~l~~~G~~v~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  296 (325)
T cd08271         226 APTLAFNGHLVCIQGRPDA-------S--PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLV  296 (325)
T ss_pred             HHhhccCCEEEEEcCCCCC-------c--chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeecc
Confidence            9999999999998753221       0  1112233333332222111    1    23445678899999999998766


Q ss_pred             eeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          310 DIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       310 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...++++++.++++.+.++...+|+++++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         297 IEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             ceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            67789999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=6.7e-32  Score=241.16  Aligned_cols=310  Identities=24%  Similarity=0.293  Sum_probs=250.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |+|+++...  +.+  ..+.+..  .+ |.+..+ ++++|++.++++|+.|+....+.+.....+|.++|+|++|+    
T Consensus         1 ~~~~~~~~~--~~~--~~~~~~~--~~-~~~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~   72 (323)
T cd08241           1 MKAVVCKEL--GGP--EDLVLEE--VP-PEPGAP-GEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAV   72 (323)
T ss_pred             CeEEEEecC--CCc--ceeEEec--CC-CCCCCC-CeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEe
Confidence            578888764  444  3445533  44 433346 89999999999999999887775433334567899999999    


Q ss_pred             -eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCC
Q 037444           86 -LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS  161 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~  161 (339)
                       +++..+++||+|+++   |++++|+.++.+. ++++ |++++.. +++.++.++.+|++++.+..+++++++|+|+|++
T Consensus        73 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~  149 (323)
T cd08241          73 GEGVTGFKVGDRVVALTGQGGFAEEVVVPAAA-VFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLGAA  149 (323)
T ss_pred             CCCCCCCCCCCEEEEecCCceeEEEEEcCHHH-ceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence             566779999999996   6899999999988 9999 9986554 5777999999999999778899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHh
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLN  240 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~  240 (339)
                      |++|++++++|+..|++|++++++.++.+.++ ++|++.+++.... ++.+.++..+.+ ++|+++||+|+..+..++++
T Consensus       150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~  227 (323)
T cd08241         150 GGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRS  227 (323)
T ss_pred             chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHh
Confidence            99999999999999999999999999999998 8998888887775 788888888776 89999999999888899999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc----cchhHHHHHHHHHHHHcCCceeeeeeeeCcc
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYPKFLELVIPAIREGKMVYVEDIAEGLE  316 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~  316 (339)
                      ++++|+++.+|.....     .........+.+++++.+.....+    +......+.++++++.++.+.+.....++++
T Consensus       228 ~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (323)
T cd08241         228 LAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLE  302 (323)
T ss_pred             hccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHH
Confidence            9999999999864321     111223345667888877765443    2223467888999999999887777778999


Q ss_pred             cHHHHHHHhHcCCccceEEEE
Q 037444          317 NAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       317 ~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      ++.++++.+.++...||++++
T Consensus       303 ~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         303 QAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHHHHHHHHhCCCCCcEEeC
Confidence            999999999988888888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.3e-32  Score=242.50  Aligned_cols=292  Identities=20%  Similarity=0.162  Sum_probs=231.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  +.|....+.+.+.  +.| .+++ +||+||+.++++|++|+....|..+. ...|.++|||++|+    
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~~~~--~~~-~~~~-~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~v   73 (329)
T cd08298           1 MKAMVLEKP--GPIEENPLRLTEV--PVP-EPGP-GEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAV   73 (329)
T ss_pred             CeEEEEecC--CCCCCCCceEEec--cCC-CCCC-CEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEE
Confidence            588999876  6543345666544  434 3477 99999999999999999988775432 34477999999999    


Q ss_pred             -eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       +++.++++||+|++                               .|+|++|+.++.+. ++++ |++++.. ++++++
T Consensus        74 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l-p~~~~~~-~~~~~~  150 (329)
T cd08298          74 GPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERF-AYPI-PEDYDDE-EAAPLL  150 (329)
T ss_pred             CCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchh-EEEC-CCCCCHH-HhhHhh
Confidence             56778999999975                               37899999999998 9999 9996555 688899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      +++.+||+++ ..++++++++++|+| +|++|++++++|+..|++|+++++++++.+.++ ++|++.+++...  .    
T Consensus       151 ~~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~----  221 (329)
T cd08298         151 CAGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDD--L----  221 (329)
T ss_pred             hhhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCc--c----
Confidence            9999999999 889999999999997 699999999999999999999999999999997 899987776643  1    


Q ss_pred             HHHhCCCCccEEEECCC-hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          214 LKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                          ..+++|+++++.+ ...++.++++++++|+++.+|....     ........ .+.++..+.+.....     .+.
T Consensus       222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~~~~~~-~~~~~~~i~~~~~~~-----~~~  286 (329)
T cd08298         222 ----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----DIPAFDYE-LLWGEKTIRSVANLT-----RQD  286 (329)
T ss_pred             ----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----CCCccchh-hhhCceEEEEecCCC-----HHH
Confidence                1237999999866 4688999999999999998874221     11111222 233444444443322     566


Q ss_pred             HHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +++++++++++.+++. ..+|+++++++|++.+.+++..||+++
T Consensus       287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            8889999999998874 567899999999999999988888874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.5e-32  Score=240.18  Aligned_cols=291  Identities=18%  Similarity=0.128  Sum_probs=230.4

Q ss_pred             CeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhh-cCCCCCC-CCCCCCCCCeeEEe-----eCCCCCCCCCEEEe
Q 037444           27 DMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRM-SKLDRPS-FVDSFHPGELKFWI-----LHIQNYAKDDLVWG   99 (339)
Q Consensus        27 ~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~-~~~~~~~-~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~   99 (339)
                      .+.+..  .+.| .+.+ +||+||+.++++|+.|+..+ .+..... ..+|.++|+|++|+     +++..+++||+|++
T Consensus         6 ~~~~~~--~~~~-~l~~-~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           6 RFEVEE--HPRP-TPGP-GQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             eeEEEE--CCCC-CCCC-CeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            345554  5555 3577 99999999999999999877 5543211 12367899999999     67778999999998


Q ss_pred             c--cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q 037444          100 S--TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC  177 (339)
Q Consensus       100 ~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga  177 (339)
                      +  |+|++|+.++++. ++++ |+++  . .++.+..++++|++++. ..++++|++|+|+| +|++|.+++++|+.+|+
T Consensus        82 ~~~g~~~~~~~v~~~~-~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g~  154 (312)
T cd08269          82 LSGGAFAEYDLADADH-AVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAGA  154 (312)
T ss_pred             ecCCcceeeEEEchhh-eEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCC
Confidence            6  7999999999998 9999 9984  2 33322378899999985 78899999999997 59999999999999999


Q ss_pred             E-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc
Q 037444          178 Y-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       178 ~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      + |+++++++++.+.++ ++|++++++.... ++.+.+++.+.+ ++|++|||+|+ ..+..++++|+++|+++.+|...
T Consensus       155 ~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~  232 (312)
T cd08269         155 RRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQ  232 (312)
T ss_pred             cEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCC
Confidence            8 999999988888887 8999888887765 888889888876 99999999986 57889999999999999998643


Q ss_pred             ccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCc-c
Q 037444          255 QYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRN-V  331 (339)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~-~  331 (339)
                      ..     ...........+++.+.++.... +....+.+++++++++++.+.+  .+..++++++++++++.+.+++. .
T Consensus       233 ~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  306 (312)
T cd08269         233 DG-----PRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGF  306 (312)
T ss_pred             CC-----CcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCc
Confidence            21     11223344556666665544322 2233567899999999999886  35667899999999999998865 4


Q ss_pred             ceEEE
Q 037444          332 GKQLV  336 (339)
Q Consensus       332 gkvvv  336 (339)
                      +|+++
T Consensus       307 ~~~~~  311 (312)
T cd08269         307 IKGVI  311 (312)
T ss_pred             eEEEe
Confidence            78876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.7e-32  Score=242.30  Aligned_cols=280  Identities=20%  Similarity=0.171  Sum_probs=218.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||+++.+.  +     .+++++  .|.| ++++ ++|+|||.++++|++|.....|.+    +.|.++|||++|+   -
T Consensus         1 ~~a~~~~~~--~-----~~~~~~--~~~p-~~~~-~~vlV~v~a~~i~~~d~~~~~g~~----~~~~~~G~e~~G~Vv~~   65 (319)
T cd08242           1 MKALVLDGG--L-----DLRVED--LPKP-EPPP-GEALVRVLLAGICNTDLEIYKGYY----PFPGVPGHEFVGIVEEG   65 (319)
T ss_pred             CeeEEEeCC--C-----cEEEEE--CCCC-CCCC-CeEEEEEEEEEEccccHHHHcCCC----CCCCccCceEEEEEEEe
Confidence            588888653  2     345654  5555 4477 999999999999999998887743    2578899999999   1


Q ss_pred             CCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCch
Q 037444           87 HIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMP  135 (339)
Q Consensus        87 ~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~  135 (339)
                      +.. +++||+|..                               .|+|++|+.++++. ++++ |++++.. +++. ..+
T Consensus        66 G~~-~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-P~~~~~~-~aa~-~~~  140 (319)
T cd08242          66 PEA-ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLEN-LHVV-PDLVPDE-QAVF-AEP  140 (319)
T ss_pred             CCC-CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHH-eEEC-cCCCCHH-Hhhh-hhH
Confidence            212 779999962                               26899999999998 9999 9985443 3433 355


Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       136 ~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      ..++|.++ +..++++|++|+|+| +|.+|++++|+|+.+|++|++++.++++.+.++ ++|++.+++++.  .      
T Consensus       141 ~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~--~------  209 (319)
T cd08242         141 LAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEA--E------  209 (319)
T ss_pred             HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCccc--c------
Confidence            56666655 778999999999997 699999999999999999999999999999999 799987776643  1      


Q ss_pred             HhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHH
Q 037444          216 RCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL  293 (339)
Q Consensus       216 ~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (339)
                        +.+ ++|++|||+|+ ..+..++++++++|+++..+....      ........++.++.++.+.....        +
T Consensus       210 --~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~--------~  273 (319)
T cd08242         210 --SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG------PASFDLTKAVVNEITLVGSRCGP--------F  273 (319)
T ss_pred             --ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC------CCccCHHHheecceEEEEEeccc--------H
Confidence              234 89999999987 578899999999999998665322      12234455667777777664433        7


Q ss_pred             HHHHHHHHcCCc--eeeeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          294 ELVIPAIREGKM--VYVEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       294 ~~~~~~l~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                      ++++++++++.+  .+.+...|+++++++|++.+.++. .+|++++
T Consensus       274 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         274 APALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             HHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence            788899999998  445677899999999999998776 4799886

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=7.4e-32  Score=243.05  Aligned_cols=285  Identities=18%  Similarity=0.203  Sum_probs=221.9

Q ss_pred             CCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhc-CCCC-CCCCCCCCCCCeeEEe-----eCCCCCCCCCEEE
Q 037444           26 SDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS-KLDR-PSFVDSFHPGELKFWI-----LHIQNYAKDDLVW   98 (339)
Q Consensus        26 ~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~-~~~~-~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~   98 (339)
                      +++.+++.  |.| ++++ ++|+|||.++++|++|+..+. +... ....+|.++|+|++|+     +++++|++||+|+
T Consensus         7 ~~~~~~~~--~~p-~l~~-~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~   82 (339)
T cd08232           7 GDLRVEER--PAP-EPGP-GEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA   82 (339)
T ss_pred             CceEEEEc--CCC-CCCC-CEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence            34566654  445 4577 999999999999999987763 3221 1123567899999999     6788899999998


Q ss_pred             e-----------------------------------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHH
Q 037444           99 G-----------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGL  143 (339)
Q Consensus        99 ~-----------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l  143 (339)
                      +                                   .|+|++|+.++++. ++++ |++++.  +.++++.++++||+++
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-~~~i-P~~~~~--~~aa~~~~~~~a~~~l  158 (339)
T cd08232          83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQ-CVPL-PDGLSL--RRAALAEPLAVALHAV  158 (339)
T ss_pred             EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHH-eEEC-cCCCCH--HHhhhcchHHHHHHHH
Confidence            6                                   27899999999998 9999 999444  3344578889999999


Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--C
Q 037444          144 YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       144 ~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+...+ ++++|||.| +|.+|++++|+|+.+|+ +|+++++++++.+.++ ++|++++++++.. +    ++....  +
T Consensus       159 ~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~----~~~~~~~~~  230 (339)
T cd08232         159 NRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-P----LAAYAADKG  230 (339)
T ss_pred             HhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-h----hhhhhccCC
Confidence            766666 999999977 59999999999999999 8999998888888877 8999899988764 4    222222  2


Q ss_pred             CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHH
Q 037444          221 GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA  299 (339)
Q Consensus       221 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  299 (339)
                      ++|++||+.|+ ..+...+++|+++|+++.+|..+..      .......++.+++++.++..      ..+.+++++++
T Consensus       231 ~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  298 (339)
T cd08232         231 DFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGP------VPLPLNALVAKELDLRGSFR------FDDEFAEAVRL  298 (339)
T ss_pred             CccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------ccCcHHHHhhcceEEEEEec------CHHHHHHHHHH
Confidence            69999999995 6788999999999999999864311      12233344567777666542      14567889999


Q ss_pred             HHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          300 IREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       300 l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++|.+++  .+..++++++++++++.+.++...||+|+++
T Consensus       299 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         299 LAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            99998864  3567789999999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.6e-31  Score=243.09  Aligned_cols=298  Identities=18%  Similarity=0.188  Sum_probs=227.1

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe-
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI-   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~-   85 (339)
                      +++++++...       +.+.+.  +.|.| .+++ +||+||+.++++|++|+..+.+....  ...+|.++|||++|+ 
T Consensus        17 ~~~~~~~~~~-------~~l~~~--~~~~p-~~~~-~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V   85 (364)
T PLN02702         17 ENMAAWLVGV-------NTLKIQ--PFKLP-PLGP-HDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGII   85 (364)
T ss_pred             ccceEEEecC-------CceEEE--eccCC-CCCC-CeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEE
Confidence            4555656542       234554  45555 4477 99999999999999999887763211  123577899999999 


Q ss_pred             ----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCcccccc
Q 037444           86 ----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTG  130 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa  130 (339)
                          +++++|++||+|++                               .|+|++|+.++++. ++++ |++++.  ..+
T Consensus        86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~-~~~~-P~~l~~--~~a  161 (364)
T PLN02702         86 EEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADL-CFKL-PENVSL--EEG  161 (364)
T ss_pred             EEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHH-eEEC-CCCCCH--HHH
Confidence                67778999999986                               37899999999998 9999 999544  333


Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCC--Ch
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYK--EE  207 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~--~~  207 (339)
                      ++..++.++++++ ...++.+|++|+|+| +|++|++++++|+.+|++ |+++.+++++.+.++ ++|+++++++.  ..
T Consensus       162 a~~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~  238 (364)
T PLN02702        162 AMCEPLSVGVHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE  238 (364)
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc
Confidence            3335566788888 778899999999997 599999999999999995 777777888888888 89998877643  33


Q ss_pred             hhHHHHHHHh---CCCCccEEEECCC-hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          208 PDLDAALKRC---FPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       208 ~~~~~~v~~~---~~g~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                       ++.+.+..+   +++++|++|||+| ...+..++++|+++|+++.+|.....      ..........+++++.++...
T Consensus       239 -~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~  311 (364)
T PLN02702        239 -DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVGVFRY  311 (364)
T ss_pred             -cHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEEeccC
Confidence             666666654   2348999999999 46889999999999999999864321      122445566778877775432


Q ss_pred             cccchhHHHHHHHHHHHHcCCce--eeeeeeeCc--ccHHHHHHHhHcCCccceEEEE
Q 037444          284 DYYHLYPKFLELVIPAIREGKMV--YVEDIAEGL--ENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                            ...++.++++++++.+.  +.+..+|++  +++++|++.+.+++..+|+++.
T Consensus       312 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        312 ------RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             ------hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence                  24678899999999885  335566544  8999999999988888899985

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.6e-31  Score=238.21  Aligned_cols=314  Identities=24%  Similarity=0.306  Sum_probs=243.9

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      ||+++...  +.+  ..+.+.+  .+.| ++.+ ++|+|++.++++|+.|+..+.+.+......|.++|+|++|+     
T Consensus         1 ~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~-~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g   72 (337)
T cd08275           1 RAVVLTGF--GGL--DKLKVEK--EALP-EPSS-GEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVG   72 (337)
T ss_pred             CeEEEcCC--CCc--cceEEEe--cCCC-CCCC-CEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEEC
Confidence            45666554  444  3455544  4444 4477 99999999999999999888775433234477899999999     


Q ss_pred             eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCc
Q 037444           86 LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG  162 (339)
Q Consensus        86 ~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g  162 (339)
                      +++.++++||+|+++   |+|++|+.++.+. ++++ |++++.. +++.++.++.+||+++.+..++++|++|+|+|++|
T Consensus        73 ~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g  149 (337)
T cd08275          73 EGVKDFKVGDRVMGLTRFGGYAEVVNVPADQ-VFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAG  149 (337)
T ss_pred             CCCcCCCCCCEEEEecCCCeeeeEEEecHHH-eEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcc
Confidence            667789999999997   7899999999988 9999 9985554 57788899999999998888999999999999999


Q ss_pred             hHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhh
Q 037444          163 AVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       163 ~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l  241 (339)
                      ++|++++++|+.. +..++... .+++.+.++ ++|++.+++.... ++.+.++..+.+++|+++||+|+.....+++++
T Consensus       150 ~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l  226 (337)
T cd08275         150 GVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL  226 (337)
T ss_pred             hHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence            9999999999998 44443332 455778887 8999888888776 788888887755899999999988888999999


Q ss_pred             ccCCEEEEEecccccCCCCC-----------ccccchHHHHhccccccceecccc---cchhHHHHHHHHHHHHcCCcee
Q 037444          242 RLRGRIAVCGMISQYNLEKP-----------EGVHNLEQLIGKRIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVY  307 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~  307 (339)
                      +++|+++.+|.....+....           .........+.+++++.++.....   .......+.++++++.++.+.+
T Consensus       227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd08275         227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP  306 (337)
T ss_pred             ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence            99999999987543211000           001122455677888877765432   1122346788999999999887


Q ss_pred             eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          308 VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       308 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .....|++++++++++.+.++...||+++++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         307 KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            7777889999999999999888889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-31  Score=236.41  Aligned_cols=266  Identities=23%  Similarity=0.284  Sum_probs=216.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      ||+++.++.   .+  ..+.++.  .|.| ++.+ ++|+|||.++++|+.|++.+.+.+.. ...|.++|+|++|+    
T Consensus         1 ~~~~~~~~~---~~--~~~~~~~--~~~p-~~~~-~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~v   70 (306)
T cd08258           1 MKALVKTGP---GP--GNVELRE--VPEP-EPGP-GEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEV   70 (306)
T ss_pred             CeeEEEecC---CC--CceEEee--cCCC-CCCC-CeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEE
Confidence            478887653   22  3456655  4555 3577 99999999999999999888775421 23467899999999    


Q ss_pred             -eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.|++||+|++.                               |+|++|+.++++. ++++ |++++.  +.++++
T Consensus        71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~l-p~~~~~--~~aa~~  146 (306)
T cd08258          71 GPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEES-LHEL-PENLSL--EAAALT  146 (306)
T ss_pred             CCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHH-eEEC-cCCCCH--HHHHhh
Confidence             678889999999874                               6899999999998 9999 999544  334488


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe--CCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA--GSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      ..+++||+++...+++++|++|+|.| +|++|++++|+|+.+|++|++++  +++++.+.++ ++|++++ ++... ++.
T Consensus       147 ~~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~  222 (306)
T cd08258         147 EPLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-DLA  222 (306)
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-CHH
Confidence            89999999998888999999999976 69999999999999999998873  3455677777 8999888 77776 888


Q ss_pred             HHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchh
Q 037444          212 AALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLY  289 (339)
Q Consensus       212 ~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (339)
                      +.++..+.+ ++|++||++|+ ..+..++++|+++|+++.+|..+..     ........++.+++++.|+.+..     
T Consensus       223 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----  292 (306)
T cd08258         223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERIIQKELSVIGSRSST-----  292 (306)
T ss_pred             HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHHhhcCcEEEEEecCc-----
Confidence            888888776 89999999975 6888999999999999999986521     12334566778999999998877     


Q ss_pred             HHHHHHHHHHHHcC
Q 037444          290 PKFLELVIPAIREG  303 (339)
Q Consensus       290 ~~~l~~~~~~l~~g  303 (339)
                      +++++++++++++|
T Consensus       293 ~~~~~~~~~~~~~~  306 (306)
T cd08258         293 PASWETALRLLASG  306 (306)
T ss_pred             hHhHHHHHHHHhcC
Confidence            77799999998875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.9e-31  Score=238.27  Aligned_cols=293  Identities=23%  Similarity=0.240  Sum_probs=233.3

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      ||+++++.  |+.    ++++  +.|.| .+.+ ++++|++.++++|+.|.....+.+. ...+|.++|+|++|+     
T Consensus         1 ~~~~~~~~--~~~----~~~~--~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~v~~~g   69 (330)
T cd08245           1 KAAVVHAA--GGP----LEPE--EVPVP-EPGP-GEVLIKIEACGVCHTDLHAAEGDWG-GSKYPLVPGHEIVGEVVEVG   69 (330)
T ss_pred             CeEEEecC--CCC----ceEE--eccCC-CCCC-CeEEEEEEEEeccHHHHHHHcCCCC-CCCCCcccCccceEEEEEEC
Confidence            67888765  432    4554  45556 3477 9999999999999999988877553 234577899999999     


Q ss_pred             eCCCCCCCCCEEE----------------------------e---ccceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 LHIQNYAKDDLVW----------------------------G---STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 ~~v~~~~~Gd~V~----------------------------~---~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                      ++++.|++||+|+                            +   .|+|++|+.++++. ++++ |++++.. +++.++.
T Consensus        70 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-~~~~-p~~~~~~-~~~~l~~  146 (330)
T cd08245          70 AGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEY-TVLL-PDGLPLA-QAAPLLC  146 (330)
T ss_pred             CCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHH-eEEC-CCCCCHH-Hhhhhhh
Confidence            5667799999997                            2   36899999999998 9999 9996555 6778999


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .+.+||+++.. .+++++++|+|+|+ |++|++++++|+.+|++|+++++++++.+.++ ++|++.+++.... +.... 
T Consensus       147 ~~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-  221 (330)
T cd08245         147 AGITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQA-  221 (330)
T ss_pred             hHHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHHh-
Confidence            99999999955 78999999999975 77999999999999999999999999999997 8998888876654 33332 


Q ss_pred             HHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHH
Q 037444          215 KRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL  293 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (339)
                         ..+++|++||++++ .....++++++++|+++.++.....     ........++.++.++.++....     ...+
T Consensus       222 ---~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  288 (330)
T cd08245         222 ---AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RADL  288 (330)
T ss_pred             ---ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HHHH
Confidence               22479999999885 6888999999999999999864321     11112344666777776665543     5678


Q ss_pred             HHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       294 ~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +++++++.++.+.+ ....+++++++++++.+.+++..||+++
T Consensus       289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            88999999999986 4456899999999999999988888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=4.4e-31  Score=234.52  Aligned_cols=295  Identities=23%  Similarity=0.340  Sum_probs=234.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~--   85 (339)
                      |||++++..  +.+  +.+.+  .+.+.| ++++ ++|+||+.++++|+.|+..+.+...  ....+|.++|||++|+  
T Consensus         1 ~~~~~~~~~--~~~--~~~~~--~~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~   72 (309)
T cd05289           1 MKAVRIHEY--GGP--EVLEL--ADVPTP-EPGP-GEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVV   72 (309)
T ss_pred             CceEEEccc--CCc--cceee--cccCCC-CCCC-CeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEE
Confidence            578888775  554  22334  344545 4577 9999999999999999988877542  1233478899999999  


Q ss_pred             ---eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 ---LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                         ++++.+++||+|+++      |+|++|+.++.+. ++++ |++++.. .++.+++.+.+|++++.+...+.+|++++
T Consensus        73 ~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~-~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vl  149 (309)
T cd05289          73 AVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADE-LALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTVL  149 (309)
T ss_pred             eeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHH-hccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEEE
Confidence               667789999999985      6899999999988 9999 9986555 57778889999999997777799999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|++|.+|++++++++..|++|+++++++ +.+.++ ++|++++++.... ++.+    .+.+ ++|+++||+|+....
T Consensus       150 v~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~~~~~~  222 (309)
T cd05289         150 IHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVGGETLA  222 (309)
T ss_pred             EecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCchHHHH
Confidence            999999999999999999999999999877 778887 8998888877664 4433    3334 899999999998889


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      .++++++++|+++.+|.....        ..  ..+.+++++.......  .  ...+.+++++++++.+.+.+...+++
T Consensus       223 ~~~~~l~~~g~~v~~g~~~~~--------~~--~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (309)
T cd05289         223 RSLALVKPGGRLVSIAGPPPA--------EQ--AAKRRGVRAGFVFVEP--D--GEQLAELAELVEAGKLRPVVDRVFPL  288 (309)
T ss_pred             HHHHHHhcCcEEEEEcCCCcc--------hh--hhhhccceEEEEEecc--c--HHHHHHHHHHHHCCCEEEeeccEEcH
Confidence            999999999999999864321        00  2334555555443321  1  56788999999999988777778899


Q ss_pred             ccHHHHHHHhHcCCccceEEE
Q 037444          316 ENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      ++++++++.+..+...+|+++
T Consensus       289 ~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         289 EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHHHHHHHhCCCCCcEeC
Confidence            999999999998887788764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=2.5e-31  Score=233.83  Aligned_cols=279  Identities=20%  Similarity=0.226  Sum_probs=229.4

Q ss_pred             CeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec--cceeeEEEecCccceee
Q 037444           45 DTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS--TGWEEYSLVTAPQLLIK  117 (339)
Q Consensus        45 ~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~  117 (339)
                      +||+||+.++++|++|++...+..   ..+|.++|+|++|+     +++.++++||+|+++  |+|++|+.++.+. +++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~   76 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARL-VVK   76 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhh-eEe
Confidence            479999999999999999887743   23578899999999     667789999999997  7999999999998 999


Q ss_pred             ccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 037444          118 IQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG  197 (339)
Q Consensus       118 i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g  197 (339)
                      + |++++.. +++.+++++.+||.++.+...+++|++|+|+|++|++|++++++|+..|++|+++++++++.+.++ .++
T Consensus        77 ~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~  153 (293)
T cd05195          77 I-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELG  153 (293)
T ss_pred             C-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhC
Confidence            9 9985554 677888999999999988889999999999999999999999999999999999999999989888 777


Q ss_pred             --CCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcc
Q 037444          198 --FDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKR  274 (339)
Q Consensus       198 --~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  274 (339)
                        ++.+++.... ++.+.+++.+.+ ++|+++|++|+..+..++++++++|+++.+|.....+.    .... ...+.++
T Consensus       154 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~-~~~~~~~  227 (293)
T cd05195         154 GPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN----SKLG-MRPFLRN  227 (293)
T ss_pred             CCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC----Cccc-hhhhccC
Confidence              6778887776 788888888876 89999999999889999999999999999987543210    0111 1223345


Q ss_pred             ccccceecccc----cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          275 IRLEGFLAGDY----YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       275 ~~~~~~~~~~~----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +.+....+...    +....+.+.+++++++++.+.+.....+++++++++++.+..++..||+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         228 VSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             CeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            55544433222    223345678899999999998777777899999999999998888788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-30  Score=232.37  Aligned_cols=289  Identities=26%  Similarity=0.273  Sum_probs=219.2

Q ss_pred             EeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec---
Q 037444           31 TSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS---  100 (339)
Q Consensus        31 ~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~---  100 (339)
                      ...+.|.| ++++ ++|+|++.++++|+.|+..+.|....  ...++.++|||++|+     ++++.+++||+|+++   
T Consensus        15 ~~~~~~~~-~~~~-~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~   92 (319)
T cd08267          15 LEVEVPIP-TPKP-GEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP   92 (319)
T ss_pred             ccccCCCC-CCCC-CEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC
Confidence            44456666 4588 99999999999999999888775421  123467899999999     677889999999985   


Q ss_pred             ---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q 037444          101 ---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC  177 (339)
Q Consensus       101 ---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga  177 (339)
                         |+|++|+.++.+. ++++ |++++.. +++.+++++.+||+++.+...+++|++|+|+|++|++|++++++|+..|+
T Consensus        93 ~~~g~~~~~~~~~~~~-~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~  169 (319)
T cd08267          93 KGGGALAEYVVAPESG-LAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA  169 (319)
T ss_pred             CCCceeeEEEEechhh-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence               6899999999988 9999 9995554 67889999999999998877799999999999999999999999999999


Q ss_pred             EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChh--hHHHHHHhhccCCEEEEEeccc
Q 037444          178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       178 ~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +|++++++ ++.+.++ ++|++++++.... ++.   +..+.+ ++|+++||+|+.  .....+..++++|+++.+|...
T Consensus       170 ~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~  243 (319)
T cd08267         170 HVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP  243 (319)
T ss_pred             EEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence            99999865 7788887 8999888877654 443   334444 899999999953  4444555599999999998754


Q ss_pred             ccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceE
Q 037444          255 QYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQ  334 (339)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  334 (339)
                      ..... ........ .......+......  +.  .+.+.++++++.++.+.+.+...+++++++++++.+.++...+|+
T Consensus       244 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~v  317 (319)
T cd08267         244 SGLLL-VLLLLPLT-LGGGGRRLKFFLAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKV  317 (319)
T ss_pred             ccccc-cccccchh-hccccceEEEEEec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcE
Confidence            32100 00000000 11111111111111  11  667889999999999988777789999999999999988878887


Q ss_pred             EE
Q 037444          335 LV  336 (339)
Q Consensus       335 vv  336 (339)
                      ++
T Consensus       318 vv  319 (319)
T cd08267         318 VI  319 (319)
T ss_pred             eC
Confidence            74

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-31  Score=253.48  Aligned_cols=284  Identities=19%  Similarity=0.178  Sum_probs=243.1

Q ss_pred             cCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCC------CCCCCCCeeEEeeCCCCCCCCCEEEec---cceeeEEEec
Q 037444           40 AEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFV------DSFHPGELKFWILHIQNYAKDDLVWGS---TGWEEYSLVT  110 (339)
Q Consensus        40 ~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~------~p~~~G~e~~G~~~v~~~~~Gd~V~~~---g~~~~~~~v~  110 (339)
                      +..+ +.=+.-|.|+.||..|+....|+..+..-      -..++|-|++|+     .+-|.||+++   -++++.+.++
T Consensus      1441 ~~~~-~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR-----d~~GrRvM~mvpAksLATt~l~~ 1514 (2376)
T KOG1202|consen 1441 PTCP-GLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR-----DASGRRVMGMVPAKSLATTVLAS 1514 (2376)
T ss_pred             CCCC-CCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc-----cCCCcEEEEeeehhhhhhhhhcc
Confidence            4455 77899999999999999999987653221      146788999996     5679999998   4789999999


Q ss_pred             CccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 037444          111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD  190 (339)
Q Consensus       111 ~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~  190 (339)
                      .++ ++.+ |.+++++ +|++.|+-|.||||||..++..++|+++||++|+|++|++||.+|-+.|++|+-++.|.++++
T Consensus      1515 rd~-lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRe 1591 (2376)
T KOG1202|consen 1515 RDF-LWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKRE 1591 (2376)
T ss_pred             hhh-hhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHH
Confidence            898 9999 9998887 899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhC---CCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccc
Q 037444          191 LLKNKFG---FDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN  266 (339)
Q Consensus       191 ~~~~~~g---~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  266 (339)
                      ++.+.|.   ..++-|.++. ++...+.+.|+| |+|+|++....+.++.+++||+..|||..+|...-.     ..+..
T Consensus      1592 fL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLS-----qNspL 1665 (2376)
T KOG1202|consen 1592 FLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLS-----QNSPL 1665 (2376)
T ss_pred             HHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecc-----cCCcc
Confidence            9985544   2456678887 999999999999 999999999999999999999999999999864322     22335


Q ss_pred             hHHHHhccccccceecccccchhHHHHHHHHHHH----HcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAI----REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l----~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ....+.+|.+++|..+.++.+...+.+.++..++    ++|.++|.+..+|+-.++++||+.|.+|+..||||+++
T Consensus      1666 GMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1666 GMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             hhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            6778899999999988777544455555555555    45678888999999999999999999999999999986

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=1.9e-30  Score=227.91  Aligned_cols=274  Identities=20%  Similarity=0.245  Sum_probs=223.7

Q ss_pred             EEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec--cceeeEEEecCccceeeccCC
Q 037444           49 LKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS--TGWEEYSLVTAPQLLIKIQHT  121 (339)
Q Consensus        49 v~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~  121 (339)
                      ||+.++++|++|++...+.+    +.|.++|+|++|+     +++..+++||+|+++  |+|++|+.++.+. ++++ |+
T Consensus         2 i~v~~~~i~~~d~~~~~g~~----~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~-~~~~-p~   75 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL----PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARL-VVPI-PD   75 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC----CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHH-eEEC-CC
Confidence            89999999999999887743    2357899999999     667789999999996  7999999999988 9999 99


Q ss_pred             CCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C
Q 037444          122 DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D  199 (339)
Q Consensus       122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~  199 (339)
                      +++.. +++.+++.+.++|+++.+...+.+|++|+|+|++|.+|++++++|+..|++|+++++++++.+.++ ++|+  +
T Consensus        76 ~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~  153 (288)
T smart00829       76 GLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDD  153 (288)
T ss_pred             CCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChh
Confidence            96555 677889999999999978889999999999999999999999999999999999999999999998 8998  7


Q ss_pred             eeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccc
Q 037444          200 DAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLE  278 (339)
Q Consensus       200 ~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (339)
                      .++++... ++.+.++..+.+ ++|+++|++|+.....++++++++|+++.+|.....+    ........ +.+++++.
T Consensus       154 ~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~~-~~~~~~~~  227 (288)
T smart00829      154 HIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMAP-FRRNVSYH  227 (288)
T ss_pred             heeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchhh-hcCCceEE
Confidence            78888776 788888887776 8999999999888889999999999999998643210    01112222 34555554


Q ss_pred             ceecccc---cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          279 GFLAGDY---YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       279 ~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +..+...   +....+.+.+++++++++.+.+.....+++++++++++.+..++..||+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      228 AVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            4433211   222345677888999999887665667899999999999998877778763

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.97  E-value=2.4e-29  Score=220.32  Aligned_cols=224  Identities=19%  Similarity=0.203  Sum_probs=181.1

Q ss_pred             CCCCeeEEe-----eCCC------CCCCCCEEEe-------------------------------------ccceeeEEE
Q 037444           77 HPGELKFWI-----LHIQ------NYAKDDLVWG-------------------------------------STGWEEYSL  108 (339)
Q Consensus        77 ~~G~e~~G~-----~~v~------~~~~Gd~V~~-------------------------------------~g~~~~~~~  108 (339)
                      ++|||++|+     ++|+      +|++||||..                                     .|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999     7787      8999999964                                     167899999


Q ss_pred             ecCc-cceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH
Q 037444          109 VTAP-QLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSK  186 (339)
Q Consensus       109 v~~~-~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~  186 (339)
                      +++. . ++++ |++++.. .++.+++.+.|||+++.+ ....+|++|||+|+ |++|++++|+|+.+|++ |+++.+++
T Consensus        81 v~~~~~-~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~  155 (280)
T TIGR03366        81 LPAGTA-IVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSP  155 (280)
T ss_pred             ecCCCc-EEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            9987 6 9999 9996654 577788899999999854 55679999999986 99999999999999996 88888899


Q ss_pred             HHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccc
Q 037444          187 EKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV  264 (339)
Q Consensus       187 ~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  264 (339)
                      ++.+.++ ++|++++++...   ..+.+++.+.+ ++|++||++|+ ..+..++++++++|+++.+|.....    ...+
T Consensus       156 ~r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~  227 (280)
T TIGR03366       156 DRRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPVA  227 (280)
T ss_pred             HHHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----Ccee
Confidence            9999998 999998887643   34566667766 89999999996 4789999999999999999964321    1123


Q ss_pred             cchHHHHhccccccceecccccchhHHHHHHHHHHHHcC--Cce--eeeeeeeCcccH
Q 037444          265 HNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREG--KMV--YVEDIAEGLENA  318 (339)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g--~~~--~~~~~~~~l~~~  318 (339)
                      .+...++.+++++.|+....     .+.++++++++.++  .+.  ..++.+|+|+++
T Consensus       228 i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       228 LDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             eCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            45677888999999876644     56789999999975  443  335666788763

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.6e-28  Score=213.96  Aligned_cols=237  Identities=29%  Similarity=0.325  Sum_probs=196.2

Q ss_pred             eEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec--------------------
Q 037444           46 TVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS--------------------  100 (339)
Q Consensus        46 evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~--------------------  100 (339)
                      ||+|+|.++++|+.|+..+.+.......+|.++|+|++|+     ++++.|++||+|+++                    
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            6899999999999999988886532234578899999999     677889999999974                    


Q ss_pred             ------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH
Q 037444          101 ------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKL  174 (339)
Q Consensus       101 ------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~  174 (339)
                            |+|++|+.++.+. ++++ |+++++. +++.++.++.+||+++.....++++++|||+|+++ +|++++++++.
T Consensus        81 ~~~~~~g~~~~~~~v~~~~-~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~  156 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADN-LVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKA  156 (271)
T ss_pred             eccccCCcceEEEEechHH-eEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHH
Confidence                  6799999999998 9999 9996554 67788899999999998877779999999999866 99999999999


Q ss_pred             cCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEec
Q 037444          175 AGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       175 ~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .|++|+++++++++.+.++ ++|++++++.... +..+.+. ...+ ++|++||++++ .....++++++++|+++.++.
T Consensus       157 ~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~  233 (271)
T cd05188         157 AGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGG  233 (271)
T ss_pred             cCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEcc
Confidence            9999999999999999998 8998888887775 6766666 4444 89999999998 788899999999999999987


Q ss_pred             ccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHH
Q 037444          253 ISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA  299 (339)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  299 (339)
                      .....     ........+.+++++.++....     ...+++++++
T Consensus       234 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  270 (271)
T cd05188         234 TSGGP-----PLDDLRRLLFKELTIIGSTGGT-----REDFEEALDL  270 (271)
T ss_pred             CCCCC-----CcccHHHHHhcceEEEEeecCC-----HHHHHHHHhh
Confidence            54421     1122456678899988887765     4455555554

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.95  E-value=1.1e-25  Score=197.08  Aligned_cols=243  Identities=24%  Similarity=0.266  Sum_probs=189.5

Q ss_pred             CCCCCCCCCeeEEe-----eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHh
Q 037444           72 FVDSFHPGELKFWI-----LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV  146 (339)
Q Consensus        72 ~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~  146 (339)
                      -++|.++|+|++|+     +++++|++||+|++++.|++|+.++.+. ++++ |++++.. +++.+ .++++||+++. .
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~-~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~   92 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANL-LVPL-PDGLPPE-RAALT-ALAATALNGVR-D   92 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHH-eeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-h
Confidence            34789999999999     6777899999999999999999999998 9999 9985544 45566 78999999984 6


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC-CCeeeeCCChhhHHHHHHHhCCC-Ccc
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFG-FDDAFNYKEEPDLDAALKRCFPQ-GID  223 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~v~~~~~g-~~d  223 (339)
                      .++++|++++|+| .|.+|++++++|+.+|++ |+++++++++.+.++ ++| ++.+++...  .       .+.+ ++|
T Consensus        93 ~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~--~-------~~~~~~~d  161 (277)
T cd08255          93 AEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTA--D-------EIGGRGAD  161 (277)
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccch--h-------hhcCCCCC
Confidence            8999999999997 599999999999999998 999999999999888 888 455544322  1       1233 899


Q ss_pred             EEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc----c---chhHHHHHH
Q 037444          224 IYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----Y---HLYPKFLEL  295 (339)
Q Consensus       224 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~l~~  295 (339)
                      ++||+++. .....++++++++|+++.+|.....      .......+..+.+++.+......    .   ....+.+++
T Consensus       162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (277)
T cd08255         162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK------PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE  235 (277)
T ss_pred             EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC------ccccHHHHHhccCeEEeecccccccccccccccccccHHH
Confidence            99999885 6788999999999999999875432      01112234445556655544322    0   122357889


Q ss_pred             HHHHHHcCCceeeeeeeeCcccHHHHHHHhHcC-CccceEEE
Q 037444          296 VIPAIREGKMVYVEDIAEGLENAPAALVGLFTG-RNVGKQLV  336 (339)
Q Consensus       296 ~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv  336 (339)
                      ++++++++.+.+.+...++++++++|++.+.++ ....|+++
T Consensus       236 ~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         236 ALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             HHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence            999999999887777778999999999999876 23446653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.80  E-value=2e-18  Score=133.43  Aligned_cols=128  Identities=28%  Similarity=0.473  Sum_probs=115.3

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCC-hhhHHHHHHh
Q 037444          163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVG-GKMLDAVLLN  240 (339)
Q Consensus       163 ~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g-~~~~~~~~~~  240 (339)
                      ++|++++|+|+++|++|+++++++++++.++ ++|+++++++++. ++.+++++++++ ++|+||||+| ...++.++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~   78 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL   78 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence            5899999999999999999999999999999 9999999999997 899999999998 9999999999 6799999999


Q ss_pred             hccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHc
Q 037444          241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIRE  302 (339)
Q Consensus       241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  302 (339)
                      ++++|+++.+|....     .....+...++.+++++.|+...+     .+.++++++++.+
T Consensus        79 l~~~G~~v~vg~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la~  130 (130)
T PF00107_consen   79 LRPGGRIVVVGVYGG-----DPISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEEEESSTST-----SEEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH-
T ss_pred             hccCCEEEEEEccCC-----CCCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhcC
Confidence            999999999998652     235567889999999999999877     7778888887764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.59  E-value=3.5e-15  Score=114.72  Aligned_cols=122  Identities=26%  Similarity=0.289  Sum_probs=81.3

Q ss_pred             hCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC--hhhH-HHHHHhhccCCEEEEEecccccCCCCCccccchHHHHh
Q 037444          196 FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG--GKML-DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIG  272 (339)
Q Consensus       196 ~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  272 (339)
                      ||+++++||+.. ++      ...+++|+|||++|  ++.+ ..++++| ++|+++.++.           .........
T Consensus         1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----------~~~~~~~~~   61 (127)
T PF13602_consen    1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----------DLPSFARRL   61 (127)
T ss_dssp             CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----------HHHHHHHHH
T ss_pred             CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----------cccchhhhh
Confidence            689999999976 66      22348999999999  6544 6777888 9999998863           011112212


Q ss_pred             ccccccceeccccc--chhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEE
Q 037444          273 KRIRLEGFLAGDYY--HLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV  336 (339)
Q Consensus       273 ~~~~~~~~~~~~~~--~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  336 (339)
                      +...+....+....  ....+.++++.+++++|++++.+..+||++++++|++.+++++..||+|+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   62 KGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             cccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222222222111  12356799999999999999999999999999999999999999999996

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.58  E-value=4.9e-15  Score=110.54  Aligned_cols=74  Identities=19%  Similarity=0.098  Sum_probs=61.8

Q ss_pred             CCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEec------------------
Q 037444           44 KDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LHIQNYAKDDLVWGS------------------  100 (339)
Q Consensus        44 ~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~~------------------  100 (339)
                      |+||+|||.++|||++|++.+.+.......+|.++|||++|+     +++++|++||+|++.                  
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            499999999999999999999985444567899999999999     788899999999873                  


Q ss_pred             ------------cceeeEEEecCccceeec
Q 037444          101 ------------TGWEEYSLVTAPQLLIKI  118 (339)
Q Consensus       101 ------------g~~~~~~~v~~~~~~~~i  118 (339)
                                  |+|+||+.++++. ++|+
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~-~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARN-LVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGG-EEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHH-EEEC
Confidence                        6889999999888 8764

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.34  E-value=2.7e-11  Score=112.38  Aligned_cols=149  Identities=14%  Similarity=0.068  Sum_probs=105.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCCh------------hhHHHHHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEE------------PDLDAALK  215 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~------------~~~~~~v~  215 (339)
                      ..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ ++..+.            .++.+..+
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            357999999997 99999999999999999999999999999999 8999854 554321            02333333


Q ss_pred             Hh-CC--CCccEEEECCChh------h-HHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHh-ccccccceeccc
Q 037444          216 RC-FP--QGIDIYFENVGGK------M-LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIG-KRIRLEGFLAGD  284 (339)
Q Consensus       216 ~~-~~--g~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  284 (339)
                      +. .+  +++|+||+|++.+      . .+++++.++++|++++++...+.+..   .......++. +++++.|.....
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~P  316 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDLP  316 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCCc
Confidence            32 33  3799999999952      3 48999999999999999874332111   1222234444 788887765322


Q ss_pred             ccchhHHHHHHHHHHHHcCCcee
Q 037444          285 YYHLYPKFLELVIPAIREGKMVY  307 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~~  307 (339)
                           .+...+..+++.++.+..
T Consensus       317 -----~~~p~~As~lla~~~i~l  334 (509)
T PRK09424        317 -----SRLPTQSSQLYGTNLVNL  334 (509)
T ss_pred             -----hhHHHHHHHHHHhCCccH
Confidence                 333445777888777654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.30  E-value=6.9e-11  Score=107.03  Aligned_cols=175  Identities=13%  Similarity=0.101  Sum_probs=126.9

Q ss_pred             hhHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          137 VTAYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       137 ~tA~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      ...+.++.+..+ ..+|++|+|.|+ |.+|+.+++.++.+|++|+++..++.+.+.++ .+|++. +      +..+.+ 
T Consensus       186 ~s~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~-~------~~~e~v-  255 (413)
T cd00401         186 ESLIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEV-M------TMEEAV-  255 (413)
T ss_pred             hhhHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEE-c------cHHHHH-
Confidence            445566655544 368999999996 99999999999999999999999999988888 888843 2      111222 


Q ss_pred             HhCCCCccEEEECCChh-hHHHH-HHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHH
Q 037444          216 RCFPQGIDIYFENVGGK-MLDAV-LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL  293 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~-~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (339)
                          .++|+||+|.|.. .+... +++++++|+++.+|..        ....+...+..+++++.++.....    ...+
T Consensus       256 ----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~  319 (413)
T cd00401         256 ----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYEL  319 (413)
T ss_pred             ----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEc
Confidence                2589999999975 56665 9999999999999853        124566777778888777655331    1124


Q ss_pred             H--HHHHHHHcCCc-eee--eeee-----eCcc-cHHHHHHHhHcCCcc-ceEEEE
Q 037444          294 E--LVIPAIREGKM-VYV--EDIA-----EGLE-NAPAALVGLFTGRNV-GKQLVA  337 (339)
Q Consensus       294 ~--~~~~~l~~g~~-~~~--~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvv~  337 (339)
                      +  ..+.++.+|.+ ...  +...     ++|+ ++.+++..+.++... -|+++.
T Consensus       320 ~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~  375 (413)
T cd00401         320 PDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFL  375 (413)
T ss_pred             CCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEEC
Confidence            4  68899999988 332  2222     5788 999999998876542 366554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.59  E-value=4.1e-06  Score=72.77  Aligned_cols=96  Identities=18%  Similarity=0.169  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-Hc-CCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAK-LA-GCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~-~~-ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      ....|+|.+|++.+++.++..++ .. +.+++.++ |..+.+..+ .+|+ ++|+.|++       |..+....--+++|
T Consensus       135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve-~lg~Yd~V~~Yd~-------i~~l~~~~~~v~VD  205 (314)
T PF11017_consen  135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVE-SLGCYDEVLTYDD-------IDSLDAPQPVVIVD  205 (314)
T ss_pred             CccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhh-ccCCceEEeehhh-------hhhccCCCCEEEEE
Confidence            45789999999999999998888 44 44899988 566677887 9998 88998865       44443456789999


Q ss_pred             CCChh-hHHHHHHhhccCC-EEEEEecccc
Q 037444          228 NVGGK-MLDAVLLNMRLRG-RIAVCGMISQ  255 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~  255 (339)
                      +.|+. .......++++.= ..+.+|.+..
T Consensus       206 faG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  206 FAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             CCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            99975 5556677777754 4456665443

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.48  E-value=1.6e-06  Score=80.73  Aligned_cols=103  Identities=20%  Similarity=0.211  Sum_probs=79.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCC-------------hhhHHHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKE-------------EPDLDAALK  215 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~~~~~v~  215 (339)
                      .++++++|.|+ |.+|++++++|+.+|++|+++..+.++++.++ ++|++.+ ++..+             . ++.+...
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~-~~~~~~~  238 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSE-EFIAAEM  238 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCH-HHHHHHH
Confidence            35789999996 99999999999999999999999999999998 8998652 23211             1 3333333


Q ss_pred             HhCC---CCccEEEECC---Chh----hHHHHHHhhccCCEEEEEecccc
Q 037444          216 RCFP---QGIDIYFENV---GGK----MLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       216 ~~~~---g~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      +.+.   .++|++|+|+   |.+    ..++.++.+++++.+++++...+
T Consensus       239 ~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G  288 (511)
T TIGR00561       239 ELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG  288 (511)
T ss_pred             HHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence            3322   2799999999   642    46788999999999999876544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.46  E-value=2.3e-06  Score=74.63  Aligned_cols=171  Identities=17%  Similarity=0.199  Sum_probs=100.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ..+++|++||.+|. |+ |..++++++..|.  +|+++..+++..+.+++.   .+...+ ..... ++.+ + .+.++.
T Consensus        73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~~~-l-~~~~~~  146 (272)
T PRK11873         73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EIEA-L-PVADNS  146 (272)
T ss_pred             ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-chhh-C-CCCCCc
Confidence            56889999999985 65 8888888888775  799999999988888732   333222 11111 2211 1 122347


Q ss_pred             ccEEEECC------C-hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHH
Q 037444          222 IDIYFENV------G-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLE  294 (339)
Q Consensus       222 ~d~vid~~------g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  294 (339)
                      +|+|+...      . ...+.++.+.|+++|+++..+.....       ...  ..+.+...+.+.....     ....+
T Consensus       147 fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-------~~~--~~~~~~~~~~~~~~~~-----~~~~~  212 (272)
T PRK11873        147 VDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-------ELP--EEIRNDAELYAGCVAG-----ALQEE  212 (272)
T ss_pred             eeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-------CCC--HHHHHhHHHHhccccC-----CCCHH
Confidence            99998643      1 24788999999999999987653321       011  1111222222111111     01133


Q ss_pred             HHHHHHHc-CCce--eeeeeeeCcccHHHHHHHh--HcCCccceEEEE
Q 037444          295 LVIPAIRE-GKMV--YVEDIAEGLENAPAALVGL--FTGRNVGKQLVA  337 (339)
Q Consensus       295 ~~~~~l~~-g~~~--~~~~~~~~l~~~~~a~~~~--~~~~~~gkvvv~  337 (339)
                      ++.+++++ |-..  ......++++++.++++.+  ..+...++.++.
T Consensus       213 e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  260 (272)
T PRK11873        213 EYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS  260 (272)
T ss_pred             HHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence            45555665 4322  2333456889999999988  555545555543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.25  E-value=8.4e-06  Score=67.69  Aligned_cols=81  Identities=26%  Similarity=0.384  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----CeeeeCCChhhHHHHHHHhCCC--CccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDAALKRCFPQ--GIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~v~~~~~g--~~d~  224 (339)
                      .+..++|+||++++|.+.++.....|++|+.+.|+.++++.+.++++.    ...+|-.+.+.....+..+...  .+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            457899999999999999999999999999999999999999878883    2345555543555556655554  6999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      .++..|-
T Consensus        85 LvNNAGl   91 (246)
T COG4221          85 LVNNAGL   91 (246)
T ss_pred             EEecCCC
Confidence            9998873

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.24  E-value=2.1e-05  Score=71.92  Aligned_cols=104  Identities=19%  Similarity=0.195  Sum_probs=78.2

Q ss_pred             hhHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          137 VTAYAGLYEVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       137 ~tA~~~l~~~~~~~-~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      ..+|.++.+..++. .|++|+|.|. |.+|..+++.++.+|++|+++..++.+...+. ..|+. +.      ++.+.+ 
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal-  265 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAA-  265 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHH-
Confidence            44566665543544 8999999996 99999999999999999999998887765555 55653 22      222222 


Q ss_pred             HhCCCCccEEEECCChh-hHH-HHHHhhccCCEEEEEeccc
Q 037444          216 RCFPQGIDIYFENVGGK-MLD-AVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~~  254 (339)
                          .++|+||+++|.. .+. ..+..+++++.++.+|...
T Consensus       266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence                2589999999975 455 6789999999999988754

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.13  E-value=5.1e-05  Score=69.00  Aligned_cols=103  Identities=19%  Similarity=0.219  Sum_probs=76.7

Q ss_pred             hhHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          137 VTAYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       137 ~tA~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      ..++.++.+..+ ..+|++|+|.|. |.+|+.+++.++.+|++|+++..++.+...+. ..|+. +.      +..+.+ 
T Consensus       179 ~s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~~-v~------~leeal-  248 (406)
T TIGR00936       179 QSTIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGFR-VM------TMEEAA-  248 (406)
T ss_pred             hhHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCCE-eC------CHHHHH-
Confidence            334555545434 468999999996 99999999999999999999988887766666 56652 22      222222 


Q ss_pred             HhCCCCccEEEECCChh-hHH-HHHHhhccCCEEEEEecc
Q 037444          216 RCFPQGIDIYFENVGGK-MLD-AVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  253 (339)
                          .+.|++|++.|.. .+. ..+..+++++.++.+|..
T Consensus       249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence                2579999999975 455 488899999999988864

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PLN02494 adenosylhomocysteinase

Probab=98.12  E-value=4e-05  Score=70.37  Aligned_cols=102  Identities=18%  Similarity=0.224  Sum_probs=78.0

Q ss_pred             hHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHH
Q 037444          138 TAYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       138 tA~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      ..+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. ++      ++.+.+. 
T Consensus       239 S~~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~-vv------~leEal~-  308 (477)
T PLN02494        239 SLPDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQ-VL------TLEDVVS-  308 (477)
T ss_pred             cHHHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCe-ec------cHHHHHh-
Confidence            346666555444 67999999996 99999999999999999999988877655555 56654 22      2222232 


Q ss_pred             hCCCCccEEEECCChh-h-HHHHHHhhccCCEEEEEecc
Q 037444          217 CFPQGIDIYFENVGGK-M-LDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       217 ~~~g~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~  253 (339)
                          ..|+++++.|.. . ....+..+++++.++.+|..
T Consensus       309 ----~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        309 ----EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             ----hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence                489999999975 3 47899999999999999874

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.11  E-value=0.00011  Score=64.72  Aligned_cols=94  Identities=21%  Similarity=0.281  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.+++|.|. |.+|+.+++.++.+|++|+++.++.++.+.++ ++|+.. +..  . ++.+.+     .++|+||+|++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~--~-~l~~~l-----~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHL--S-ELAEEV-----GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecH--H-HHHHHh-----CCCCEEEECCC
Confidence            6899999996 99999999999999999999999988877777 788643 211  1 222222     25999999998


Q ss_pred             hhh-HHHHHHhhccCCEEEEEecccc
Q 037444          231 GKM-LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       231 ~~~-~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ... -...++.+++++.+++++...+
T Consensus       220 ~~~i~~~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        220 ALVLTKEVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence            653 3567788999999999887543

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.08  E-value=7.4e-05  Score=64.22  Aligned_cols=146  Identities=16%  Similarity=0.213  Sum_probs=94.2

Q ss_pred             eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHH
Q 037444           86 LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVG  165 (339)
Q Consensus        86 ~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G  165 (339)
                      ...+.+++||+++...+|.+|.. +... ++++ +++  +.+..+..+.+.. ....+.+  .+.++.+||-.|. |. |
T Consensus        62 ~~~~p~~~g~~~~i~p~~~~~~~-~~~~-~i~i-~p~--~afgtg~h~tt~~-~l~~l~~--~~~~~~~VLDiGc-Gs-G  131 (250)
T PRK00517         62 KYFHPIRIGDRLWIVPSWEDPPD-PDEI-NIEL-DPG--MAFGTGTHPTTRL-CLEALEK--LVLPGKTVLDVGC-GS-G  131 (250)
T ss_pred             HHCCCEEEcCCEEEECCCcCCCC-CCeE-EEEE-CCC--CccCCCCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-cH-H
Confidence            34566889999999988988854 6566 8888 666  5544333333222 2223322  2568899999994 54 8


Q ss_pred             HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC--CccEEEECCChh----hHHHHH
Q 037444          166 QLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ--GIDIYFENVGGK----MLDAVL  238 (339)
Q Consensus       166 ~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g--~~d~vid~~g~~----~~~~~~  238 (339)
                      ..++.+++ .|+ +|+++..++...+.+++.+....+ .  .  .    + .+..+  .+|+|+......    .+.++.
T Consensus       132 ~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~-~--~--~----~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~  200 (250)
T PRK00517        132 ILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGV-E--L--N----V-YLPQGDLKADVIVANILANPLLELAPDLA  200 (250)
T ss_pred             HHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCC-C--c--e----E-EEccCCCCcCEEEEcCcHHHHHHHHHHHH
Confidence            77776554 576 699999999888777632211111 0  0  0    0 01112  599999877643    456788


Q ss_pred             HhhccCCEEEEEec
Q 037444          239 LNMRLRGRIAVCGM  252 (339)
Q Consensus       239 ~~l~~~G~~v~~g~  252 (339)
                      ++|+++|+++..|.
T Consensus       201 ~~LkpgG~lilsgi  214 (250)
T PRK00517        201 RLLKPGGRLILSGI  214 (250)
T ss_pred             HhcCCCcEEEEEEC
Confidence            99999999998764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.05  E-value=3.1e-05  Score=62.29  Aligned_cols=78  Identities=17%  Similarity=0.300  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CeeeeCCChhh----HHHHHHHhCCCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEPD----LDAALKRCFPQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~----~~~~v~~~~~g~~d~  224 (339)
                      -|.+|||+||++++|++.++--..+|-+||+..|++++++.++.....  ..|.|-.+. +    +.+++....+ ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~-~~~~~lvewLkk~~P-~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADR-DSRRELVEWLKKEYP-NLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccch-hhHHHHHHHHHhhCC-chhe
Confidence            377999999999999999999999999999999999999998833322  345554443 3    3344433222 5889


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ++++.|
T Consensus        82 liNNAG   87 (245)
T COG3967          82 LINNAG   87 (245)
T ss_pred             eeeccc
Confidence            998887

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.99  E-value=0.0001  Score=66.97  Aligned_cols=99  Identities=17%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC--
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV--  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~--  229 (339)
                      +.+|+|.|+ |.+|+.+++.++.+|++|+++.++.++.+.+.+.++...........++.+.+     .++|++|+|+  
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-----~~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-----KRADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-----ccCCEEEEcccc
Confidence            456999996 99999999999999999999999988877776355543222222221333332     2589999998  


Q ss_pred             -Ch--h--hHHHHHHhhccCCEEEEEeccccc
Q 037444          230 -GG--K--MLDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       230 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                       +.  +  .-...++.+++++.+++++...+.
T Consensus       241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCC
Confidence             32  2  236788889999999998865443

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.99  E-value=9.6e-05  Score=62.89  Aligned_cols=104  Identities=20%  Similarity=0.246  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Ceee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+++++|+|++|++|..+++.+...|++|+.+++++++.+.+.+++..   .+.+  |..+.+.+.+.+.+...  +++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467999999999999999999999999999999998877666323322   1222  33332133333332221  3689


Q ss_pred             EEEECCChh------------------------hHHHHHHhhccCCEEEEEeccc
Q 037444          224 IYFENVGGK------------------------MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       224 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .++.+.+..                        .++..+.+++++|+++.+++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999988731                        1334555667789999887754

>PRK12742 oxidoreductase; Provisional

Probab=97.96  E-value=0.00018  Score=61.13  Aligned_cols=103  Identities=19%  Similarity=0.235  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.++||+||+|++|..+++.+...|++|+.+.+ +.++.+.+.++++...+ .|..+...+.+.+.+.  +++|++|++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~   82 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN   82 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence            4679999999999999999999999999988765 44555555435565322 3333321233333321  469999999


Q ss_pred             CChh----h-------H---------------HHHHHhhccCCEEEEEecccc
Q 037444          229 VGGK----M-------L---------------DAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       229 ~g~~----~-------~---------------~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      .|..    .       +               ..+...++.+|+++.+++...
T Consensus        83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence            8731    0       0               233344556789998877443

>PRK08324 short chain dehydrogenase; Validated

Probab=97.95  E-value=0.00011  Score=72.51  Aligned_cols=138  Identities=20%  Similarity=0.234  Sum_probs=87.3

Q ss_pred             ceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH--hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE
Q 037444          102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV  179 (339)
Q Consensus       102 ~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V  179 (339)
                      ++++|..+++.. ++.+  +.+++  +.+.           +.+  .....+|+++||+||+|++|.++++.+...|++|
T Consensus       386 ~~~~~~~l~~~~-~f~i--~~~~~--e~a~-----------l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~V  449 (681)
T PRK08324        386 AVGRYEPLSEQE-AFDI--EYWSL--EQAK-----------LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACV  449 (681)
T ss_pred             hcCCccCCChhh-hcce--eeehh--hhhh-----------hhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEE
Confidence            567777777766 6655  23222  2221           111  1223468999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHhCC--C---eeeeCCChhhHHHHHHHhC--CCCccEEEECCChh--------------------
Q 037444          180 VGSAGSKEKVDLLKNKFGF--D---DAFNYKEEPDLDAALKRCF--PQGIDIYFENVGGK--------------------  232 (339)
Q Consensus       180 ~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~v~~~~--~g~~d~vid~~g~~--------------------  232 (339)
                      ++++++.++.+.+.+.++.  .   ...|-.+...+.+.+.+..  .|++|++|++.|..                    
T Consensus       450 vl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N  529 (681)
T PRK08324        450 VLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVN  529 (681)
T ss_pred             EEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence            9999998877666545543  1   1234444313333333332  24799999999821                    


Q ss_pred             ------hHHHHHHhhcc---CCEEEEEecccc
Q 037444          233 ------MLDAVLLNMRL---RGRIAVCGMISQ  255 (339)
Q Consensus       233 ------~~~~~~~~l~~---~G~~v~~g~~~~  255 (339)
                            .++.++..+++   +|+++.+++...
T Consensus       530 ~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~  561 (681)
T PRK08324        530 ATGHFLVAREAVRIMKAQGLGGSIVFIASKNA  561 (681)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence                  13344556655   589999887544

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.94  E-value=7.9e-05  Score=63.61  Aligned_cols=80  Identities=18%  Similarity=0.261  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----ee--eeCCChhhHHHHHHH-hC-CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-----DA--FNYKEEPDLDAALKR-CF-PQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-----~v--~~~~~~~~~~~~v~~-~~-~g  220 (339)
                      ..+.+++|+||++++|...+..+...|.+|+.+.|+.++++.+.+++.-.     ++  +|..+. +-...+.. +. .+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999987776555421     23  344444 33333333 22 23


Q ss_pred             -CccEEEECCC
Q 037444          221 -GIDIYFENVG  230 (339)
Q Consensus       221 -~~d~vid~~g  230 (339)
                       .+|+.+++.|
T Consensus        83 ~~IdvLVNNAG   93 (265)
T COG0300          83 GPIDVLVNNAG   93 (265)
T ss_pred             CcccEEEECCC
Confidence             7999999998

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.94  E-value=0.0002  Score=62.45  Aligned_cols=77  Identities=23%  Similarity=0.372  Sum_probs=56.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCC--CCccEEEECC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFP--QGIDIYFENV  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~--g~~d~vid~~  229 (339)
                      .++||+||+|++|..+++.+...|++|++++++.++.+.+. ..+...+ .|..+.+.+.+.+.....  +++|++|++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            37999999999999999999889999999999988777666 5554322 455554244444444322  3799999999


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            8

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.93  E-value=7.6e-05  Score=66.28  Aligned_cols=107  Identities=21%  Similarity=0.227  Sum_probs=73.7

Q ss_pred             eeeccCCCCCccccccccCchhhhHHHHHHHhcCC---CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 037444          115 LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSP---KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD  190 (339)
Q Consensus       115 ~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~---~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~  190 (339)
                      .+++ |+.  +..+.+....+.++++.++......   .++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++.+
T Consensus       141 a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         141 AIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            6667 777  4434555556677888776332221   47899999996 9999999999988876 7888999888765


Q ss_pred             HHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          191 LLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      .+.+++|.. +++..   ++.+.+.     .+|+||.|++.+..
T Consensus       217 ~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence            554488873 33221   3333332     48999999997644

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.93  E-value=0.00022  Score=62.28  Aligned_cols=79  Identities=18%  Similarity=0.310  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHh---CCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRC---FPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~---~~g~~d~vi  226 (339)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+. ..+... ..|..+..++.+.+.+.   ..+.+|++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            3578999999999999999988889999999999988887776 555432 23444432333333332   335799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PRK06182 short chain dehydrogenase; Validated

Probab=97.87  E-value=0.00025  Score=61.80  Aligned_cols=79  Identities=23%  Similarity=0.388  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhC--CCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCF--PQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~--~g~~d~vid  227 (339)
                      ++.+++|+|++|++|..+++.+...|++|++++++.++.+.+. ..+... ..|..+.+++.+.+.++.  .+++|++|+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3678999999999999999998889999999999988776665 444432 235444424444444332  247999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        81 ~ag   83 (273)
T PRK06182         81 NAG   83 (273)
T ss_pred             CCC
Confidence            987

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.85  E-value=0.00012  Score=56.47  Aligned_cols=93  Identities=23%  Similarity=0.270  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+++|.|+ |++|.+++..+...|+ +|+++.|+.++.+.+.+.++..  .++++.   ++.+.+.     .+|+||+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~---~~~~~~~-----~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE---DLEEALQ-----EADIVIN   81 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG---GHCHHHH-----TESEEEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH---HHHHHHh-----hCCeEEE
Confidence            5889999997 9999999999999999 5999999999988777577432  244443   3322222     5999999


Q ss_pred             CCChhhH---HHHHHhhcc-CCEEEEEec
Q 037444          228 NVGGKML---DAVLLNMRL-RGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~---~~~~~~l~~-~G~~v~~g~  252 (339)
                      |++....   ...+....+ -+.+++++.
T Consensus        82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~  110 (135)
T PF01488_consen   82 ATPSGMPIITEEMLKKASKKLRLVIDLAV  110 (135)
T ss_dssp             -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred             ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence            9986522   222222222 156777765

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.79  E-value=0.00045  Score=59.79  Aligned_cols=80  Identities=14%  Similarity=0.169  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.++++.. .+  .|..+.+++.+.+.+...  +.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999998889999999999987766665455532 12  344443234444443322  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        85 v~~ag   89 (261)
T PRK08265         85 VNLAC   89 (261)
T ss_pred             EECCC
Confidence            99887

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.72  E-value=0.00066  Score=64.28  Aligned_cols=105  Identities=11%  Similarity=0.165  Sum_probs=68.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CC-----Ceee--eCCChhh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--------GF-----DDAF--NYKEEPD  209 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--------g~-----~~v~--~~~~~~~  209 (339)
                      ...+.+.|.++||+||+|.+|..+++.+...|++|++++++.++.+.+.+.+        |.     ..++  |..+.  
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~--  150 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP--  150 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH--
Confidence            4456678999999999999999999998889999999999988765443221        21     1122  33322  


Q ss_pred             HHHHHHHhCCCCccEEEECCChhh----------------HHHHHHhhcc--CCEEEEEeccc
Q 037444          210 LDAALKRCFPQGIDIYFENVGGKM----------------LDAVLLNMRL--RGRIAVCGMIS  254 (339)
Q Consensus       210 ~~~~v~~~~~g~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~  254 (339)
                        +.+.... +++|+||++.|...                ....++.+..  .|+||.++...
T Consensus       151 --esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        151 --DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             --HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence              2333332 36999999987420                1223333333  36899887754

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.72  E-value=0.00041  Score=64.07  Aligned_cols=99  Identities=19%  Similarity=0.232  Sum_probs=73.2

Q ss_pred             HHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC
Q 037444          141 AGLYEVC-SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       141 ~~l~~~~-~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      .++.+.. ..-.|.+|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +.      ++.+.++    
T Consensus       242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~-~~------~leell~----  308 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQ-VV------TLEDVVE----  308 (476)
T ss_pred             HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCce-ec------cHHHHHh----
Confidence            4443443 3458999999996 99999999999999999999987766654444 44543 11      2323232    


Q ss_pred             CCccEEEECCChh-hH-HHHHHhhccCCEEEEEecc
Q 037444          220 QGIDIYFENVGGK-ML-DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       220 g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (339)
                       ..|+|+.+.|.. .+ ...+..+++++.++.+|..
T Consensus       309 -~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        309 -TADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             -cCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence             589999999975 44 3899999999999998864

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.71  E-value=0.00024  Score=65.94  Aligned_cols=94  Identities=27%  Similarity=0.319  Sum_probs=65.2

Q ss_pred             ccccCchhhhHHHHHHHhcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          129 TGILGMPGVTAYAGLYEVCS---PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~---~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      .+....+.++++.++.....   -.++.+|+|.|+ |.+|.++++.++..|+ +|+++.++.++.+.+.+.+|.. +++.
T Consensus       156 t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~  233 (423)
T PRK00045        156 TGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL  233 (423)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH
Confidence            33334456777777633222   257899999996 9999999999999998 8999999988866444377753 3322


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                        . ++.+.+     .++|+||+|++++
T Consensus       234 --~-~~~~~l-----~~aDvVI~aT~s~  253 (423)
T PRK00045        234 --D-ELPEAL-----AEADIVISSTGAP  253 (423)
T ss_pred             --H-HHHHHh-----ccCCEEEECCCCC
Confidence              1 332222     2589999999964

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.70  E-value=0.00031  Score=62.04  Aligned_cols=81  Identities=20%  Similarity=0.266  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee----eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA----FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v----~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .|.++||+||+|++|..+++.+...|++|+++.++.++.+.+.++++.. .+    .|-.+.+++.+.+.++..  +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999988877665466531 11    344443233333333322  4799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999983

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00094  Score=57.90  Aligned_cols=81  Identities=23%  Similarity=0.367  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-e--eeeCCChhhHHHHHHHhCC-CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-D--AFNYKEEPDLDAALKRCFP-QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~v~~~~~-g~~  222 (339)
                      .|.++||+|+++++|.++++.+...|++|+++.++.++.+.+.+++    +.. .  ..|-.+..+....+.+... |++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4788999999999999999999999999999999887765554333    321 1  2243333233333333321 479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+++++.|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999998873

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.66  E-value=6.1e-05  Score=72.71  Aligned_cols=96  Identities=17%  Similarity=0.228  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------------------HHHHHHHHHHhCCCeeeeCCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS---------------------KEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~---------------------~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      ..++|++|+|+|+ |++|+.+++.++..|++|+++...                     ..+.+.++ ++|++..++...
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~  210 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV  210 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence            3678999999997 999999999999999999998742                     34556777 789876565432


Q ss_pred             -hhhH-HHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          207 -EPDL-DAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       207 -~~~~-~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                       . +. .+.+    ..++|+||+++|.. .....+.....+|.+..+
T Consensus       211 ~~-~~~~~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        211 GE-DITLEQL----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CC-cCCHHHH----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence             1 21 1122    12699999999964 333333334444554433

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.00096  Score=60.01  Aligned_cols=81  Identities=22%  Similarity=0.215  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe---eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD---AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.++   .|...   ..|..+.+++.+.+.++..  +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            467899999999999999999888999999999998776554422   34321   2344443233333333221  479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.64  E-value=0.0011  Score=56.65  Aligned_cols=80  Identities=13%  Similarity=0.147  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhC--CCCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      ++.+++|+||+|++|..+++.+...|++|++++++.++.+.+.++++.. ..  .|..+..+....+..+.  .+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999999999877666555456643 12  23333212222222222  1379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        85 i~~ag   89 (249)
T PRK06500         85 FINAG   89 (249)
T ss_pred             EECCC
Confidence            99887

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.62  E-value=0.0011  Score=53.81  Aligned_cols=94  Identities=18%  Similarity=0.199  Sum_probs=65.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh---
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG---  231 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~---  231 (339)
                      |+|.||+|.+|..+++.+...|.+|++++|++++.+.   ..+. +++..+-. +. +.+.+... ++|.||+++|.   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence            7999999999999999999999999999999887664   2233 23333322 32 33444333 69999999983   


Q ss_pred             --hhHHHHHHhhccCC--EEEEEecccc
Q 037444          232 --KMLDAVLLNMRLRG--RIAVCGMISQ  255 (339)
Q Consensus       232 --~~~~~~~~~l~~~G--~~v~~g~~~~  255 (339)
                        +.....++.++..|  +++.++....
T Consensus        74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~~  101 (183)
T PF13460_consen   74 DVDAAKNIIEAAKKAGVKRVVYLSSAGV  101 (183)
T ss_dssp             HHHHHHHHHHHHHHTTSSEEEEEEETTG
T ss_pred             cccccccccccccccccccceeeecccc
Confidence              34556666665544  7777776443

...

>PRK06057 short chain dehydrogenase; Provisional

Probab=97.60  E-value=0.00055  Score=58.96  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .|.+++|+||+|++|..+++.+...|++|+++++++.+.+...++++.. ...|..+...+.+.+.+...  +++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999999999999999999889999999999887766554355442 22344443233333333321  37899999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        86 ~ag   88 (255)
T PRK06057         86 NAG   88 (255)
T ss_pred             CCC
Confidence            887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.59  E-value=0.0013  Score=61.87  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhC--CCCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      ++.++||+|++|++|..+++.+...|++|+++.++.  ++.+.+.++++.. ..+|..+.......+....  .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999988743  3333343355543 2345554412333233222  1379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus       289 i~~AG  293 (450)
T PRK08261        289 VHNAG  293 (450)
T ss_pred             EECCC
Confidence            99988

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.59  E-value=0.00042  Score=62.17  Aligned_cols=80  Identities=21%  Similarity=0.331  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe---eeeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD---AFNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.+++|+||+|++|.++++.+...|++|+++.+++++.+.+.+   +.|...   ..|-.+.+++.+.+.++.  .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999999887755442   335431   234444312322222221  2479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        86 D~lVnnAG   93 (330)
T PRK06139         86 DVWVNNVG   93 (330)
T ss_pred             CEEEECCC
Confidence            99999987

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.57  E-value=0.00038  Score=51.64  Aligned_cols=94  Identities=20%  Similarity=0.321  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~-~~ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      ||.+||-.|  .+.|..++.+++ ..+++|+++..+++-.+.+++..   +...-+..... ++ . ......+++|+|+
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~-~~~~~~~~~D~v~   75 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-E-FDPDFLEPFDLVI   75 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-H-GGTTTSSCEEEEE
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-c-cCcccCCCCCEEE
Confidence            678999998  567999999998 46889999999999888887555   32211111111 33 1 1111123799999


Q ss_pred             ECC-Chh----------hHHHHHHhhccCCEEEE
Q 037444          227 ENV-GGK----------MLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       227 d~~-g~~----------~~~~~~~~l~~~G~~v~  249 (339)
                      ... ...          .++...+.|+++|+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            877 221          27788999999999875

...

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00098  Score=56.90  Aligned_cols=79  Identities=23%  Similarity=0.310  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+..+... ..|..+...+.+.+..  .+++|++|++.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~a   85 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCA   85 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--hCCCCEEEECC
Confidence            56799999999999999999999999999999999887766653455432 2344443122222222  13799999988


Q ss_pred             Ch
Q 037444          230 GG  231 (339)
Q Consensus       230 g~  231 (339)
                      |.
T Consensus        86 g~   87 (245)
T PRK07060         86 GI   87 (245)
T ss_pred             CC
Confidence            73

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.55  E-value=0.00067  Score=58.73  Aligned_cols=80  Identities=19%  Similarity=0.262  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      ++.+++|+||++++|..+++.+...|++|+++.+++++.+.+.++++.. ..  .|-.+..++...+.+...  +++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4679999999999999999988889999999999988877666455431 22  233332133344443322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        85 i~~ag   89 (263)
T PRK06200         85 VGNAG   89 (263)
T ss_pred             EECCC
Confidence            99887

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.55  E-value=0.002  Score=56.44  Aligned_cols=93  Identities=20%  Similarity=0.260  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+++|.|. |.+|.++++.++.+|++|++..++.++.+.+. +.|.. .+..  . ++.+.+     .++|+||+++.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~-~~~~--~-~l~~~l-----~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLI-PFPL--N-KLEEKV-----AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-eecH--H-HHHHHh-----ccCCEEEECCC
Confidence            5789999996 99999999999999999999999988776666 56643 1211  1 222222     25999999998


Q ss_pred             hhhH-HHHHHhhccCCEEEEEeccc
Q 037444          231 GKML-DAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       231 ~~~~-~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ...+ ...++.++++..+++++..+
T Consensus       219 ~~ii~~~~l~~~k~~aliIDlas~P  243 (287)
T TIGR02853       219 ALVLTADVLSKLPKHAVIIDLASKP  243 (287)
T ss_pred             hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence            6533 35677888888888887743

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.0013  Score=56.28  Aligned_cols=81  Identities=19%  Similarity=0.218  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|++|++|..++..+...|++|+++.+++++.+.+.+++   +.. .+  .|..+.+.+.+.+.+...  +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999998889999999998887665443232   322 22  244433123332322211  479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.53  E-value=0.0013  Score=53.78  Aligned_cols=109  Identities=20%  Similarity=0.212  Sum_probs=75.4

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCCCeeeeCCCh
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV----DLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~----~~~~~~~g~~~v~~~~~~  207 (339)
                      +..+...|. ++ +...+++|++||=+|  .+.|+.++-+|+..| +|+.+.+.++=.    ..++ .+|...|..... 
T Consensus        55 is~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~-~lg~~nV~v~~g-  127 (209)
T COG2518          55 ISAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLE-TLGYENVTVRHG-  127 (209)
T ss_pred             ecCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHH-HcCCCceEEEEC-
Confidence            333444444 33 678899999999999  688999999999988 999999887633    3344 677754322111 


Q ss_pred             hhHHHHHHHhCC-CCccEEEECCChhh-HHHHHHhhccCCEEEEEe
Q 037444          208 PDLDAALKRCFP-QGIDIYFENVGGKM-LDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       208 ~~~~~~v~~~~~-g~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  251 (339)
                       |-   ...+.. +.||.++-+.+.+. -...++.|+++|+++.--
T Consensus       128 -DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         128 -DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             -Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence             11   122222 37999998888654 467889999999998653

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0022  Score=55.41  Aligned_cols=79  Identities=19%  Similarity=0.272  Sum_probs=55.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-C-Ce--eeeCCChhhHHHHHHHhC---CCCccEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG-F-DD--AFNYKEEPDLDAALKRCF---PQGIDIY  225 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g-~-~~--v~~~~~~~~~~~~v~~~~---~g~~d~v  225 (339)
                      .++||+||+|++|..+++.+...|++|+++.++.++.+.+.+.++ . .+  .+|-.+..++.+.+....   .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            469999999999999999888899999999999888776653443 1 11  234444323443333331   3479999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      +.+.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999873

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.00076  Score=58.73  Aligned_cols=79  Identities=15%  Similarity=0.202  Sum_probs=56.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      +.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.++...  ..|..+.+++.+.+..+..  +++|++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5789999999999999998888889999999999888766553555222  2344443233333333322  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        85 ~ag   87 (273)
T PRK07825         85 NAG   87 (273)
T ss_pred             CCC
Confidence            987

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.51  E-value=0.0019  Score=55.25  Aligned_cols=102  Identities=20%  Similarity=0.229  Sum_probs=63.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNK---FGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++.++.+ +.+.+.++   .+.. .  ..|..+.+++.+.+.++..  ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999988889999999887643 33322212   2321 1  2244443233333333322  36


Q ss_pred             ccEEEECCChh--------------------hHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVGGK--------------------MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|++|.+.|..                    .++.+...+..+|+++.+++
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            89999887631                    22334444555688888865

>PRK06484 short chain dehydrogenase; Validated

Probab=97.51  E-value=0.0014  Score=62.80  Aligned_cols=105  Identities=18%  Similarity=0.199  Sum_probs=72.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|..+++.+...|++|+++.++.++.+.+.++++...   ..|..+.+++...+.+...  |.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57789999999999999999888899999999999888777764565431   2344443234444443322  479999


Q ss_pred             EECCChh------------h---------------HHHHHHhhccCCEEEEEecccc
Q 037444          226 FENVGGK------------M---------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       226 id~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      |++.|..            .               .+.++..++.+|+++.+++...
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            9988731            0               1223445556799998877544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.50  E-value=0.00076  Score=58.37  Aligned_cols=80  Identities=24%  Similarity=0.279  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      ++.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.+..+.. ..  .|..+.....+.+.+...  +++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999988889999999999888777666333321 11  233332133344444322  478999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.50  E-value=0.0054  Score=53.04  Aligned_cols=84  Identities=21%  Similarity=0.227  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-e--eeCCChhh------HHHHHHHhC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-A--FNYKEEPD------LDAALKRCF  218 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~------~~~~v~~~~  218 (339)
                      +-++...++|+|+++++|++.+.-++..|++|.++.++.+++..+++.++... +  +.+... |      ....++++-
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~-d~~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSV-DVIDYDSVSKVIEELR  107 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecc-ccccHHHHHHHHhhhh
Confidence            34556899999999999999999999999999999999999888876666521 1  112221 2      223333332


Q ss_pred             --CCCccEEEECCChh
Q 037444          219 --PQGIDIYFENVGGK  232 (339)
Q Consensus       219 --~g~~d~vid~~g~~  232 (339)
                        .+.+|.+|+|.|..
T Consensus       108 ~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGVA  123 (331)
T ss_pred             hccCCcceEEEecCcc
Confidence              24789999999853

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.50  E-value=0.0011  Score=57.21  Aligned_cols=106  Identities=21%  Similarity=0.296  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe-ee----eCCChhhHHHHHHHhC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD-AF----NYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~-v~----~~~~~~~~~~~v~~~~--~g  220 (339)
                      .|..|+|+||++|+|.+++.-....|++++.+.+..++++.+.+   +.+... ++    |-.+.++..+.+.++.  -|
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            57889999999999999888888899998888888777666622   334332 22    3333323444443322  24


Q ss_pred             CccEEEECCChh-----------h---------------HHHHHHhhccC--CEEEEEeccccc
Q 037444          221 GIDIYFENVGGK-----------M---------------LDAVLLNMRLR--GRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~--G~~v~~g~~~~~  256 (339)
                      ++|+.++..|-.           .               ...++..|++.  |+++.+++..+.
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence            899999987721           1               13455666653  999999886654

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.00066  Score=58.89  Aligned_cols=80  Identities=21%  Similarity=0.255  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+||+|++|..+++.+...|++|+++.+++++.+...+++   +.. .  .+|..+..++...+.+...  +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999998877654433232   221 1  2344443234444444322  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99998875

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.001  Score=57.46  Aligned_cols=83  Identities=16%  Similarity=0.241  Sum_probs=56.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD--D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .-++.++||+||+|++|..+++.+...|++|+++.++.+..+.+.+.....  .  ..|..+...+.+.+.+...  +++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            347789999999999999999998889999999999877666555233222  1  2344433123333333211  379


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+||.+.|.
T Consensus        88 d~vi~~ag~   96 (264)
T PRK12829         88 DVLVNNAGI   96 (264)
T ss_pred             CEEEECCCC
Confidence            999998873

>PLN02780 ketoreductase/ oxidoreductase

Probab=97.46  E-value=0.0012  Score=59.08  Aligned_cols=79  Identities=14%  Similarity=0.249  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCe----eeeCCC--hhhHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFDD----AFNYKE--EPDLDAALKRCFPQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~--~~~~~~~v~~~~~g  220 (339)
                      .|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++    +...    .+|-.+  . +..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDID-EGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcH-HHHHHHHHHhcC
Confidence            5899999999999999988887788999999999998876554333    1111    234332  2 334445544444


Q ss_pred             -CccEEEECCC
Q 037444          221 -GIDIYFENVG  230 (339)
Q Consensus       221 -~~d~vid~~g  230 (339)
                       .+|+++++.|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence             6779999876

>PRK06196 oxidoreductase; Provisional

Probab=97.45  E-value=0.0011  Score=59.13  Aligned_cols=80  Identities=18%  Similarity=0.193  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++..-..  .|-.+..++.+.+.++..  +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            567999999999999999988888999999999998876555433321122  243333233333443322  4799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus       105 ~nAg  108 (315)
T PRK06196        105 NNAG  108 (315)
T ss_pred             ECCC
Confidence            9887

>PRK08177 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.00092  Score=56.40  Aligned_cols=77  Identities=19%  Similarity=0.203  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+++|+|++|++|..+++.+...|++|+++++++++.+.++ +++...  .+|..+.+++.+.+..+..+++|++|.+.|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            47999999999999998888888999999999887766665 443222  234444323334444443348999999876

>PRK08017 oxidoreductase; Provisional

Probab=97.44  E-value=0.0016  Score=56.05  Aligned_cols=77  Identities=16%  Similarity=0.272  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHH---HHHHhCCCCccEEEEC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDA---ALKRCFPQGIDIYFEN  228 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~---~v~~~~~g~~d~vid~  228 (339)
                      .+++|+|++|++|..+++.+...|++|+++.++.++.+.++ +.+... ..|..+...+.+   .+.....+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999999999999999999989999999999988887777 666643 234444312222   2333233578999988


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.42  E-value=0.0066  Score=50.18  Aligned_cols=100  Identities=20%  Similarity=0.323  Sum_probs=69.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhC-CCeeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFG-FDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g-~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      ....+.++++|+-.|+ |. |..++.+++..+  .+|+++..+++..+.+++   .+| .+.+.....  +..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~--d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG--EAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe--chhhhHhh-c
Confidence            4467889999999995 55 999999998764  589999999888776653   355 232211111  32222322 2


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEE
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  249 (339)
                      .+.+|.||...+.    ..+..+.++|+++|+++.
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            2479999986552    367788899999999875

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0012  Score=57.24  Aligned_cols=80  Identities=19%  Similarity=0.248  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCe----eeeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFDD----AFNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.+++|+||++++|.++++.+...|++|+++.+++++.+.+.+++    +...    ..|-.+.+.+.+.+.++..  +
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999899999999999887665443222    1111    2244443233333333322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        87 ~id~li~~Ag   96 (265)
T PRK07062         87 GVDMLVNNAG   96 (265)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.40  E-value=0.0021  Score=58.68  Aligned_cols=111  Identities=18%  Similarity=0.117  Sum_probs=76.7

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +..+....+..+.+..++++|++||-+|.  +.|..+..+++..|++|++++.+++..+.+++.. ....+..... ++.
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~  223 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR  223 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh
Confidence            33344455555667778899999999984  6888889999988999999999999998888333 2111221111 322


Q ss_pred             HHHHHhCCCCccEEEEC-----CCh----hhHHHHHHhhccCCEEEEEe
Q 037444          212 AALKRCFPQGIDIYFEN-----VGG----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                          .. .+.+|.|+..     +|.    ..+..+.+.|+++|+++...
T Consensus       224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence                11 3479998753     342    25778889999999998653

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0011  Score=58.59  Aligned_cols=81  Identities=23%  Similarity=0.359  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .+  .|-.+.+++.+.+..+.  -+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999988888999999999987765554232   322 22  23333313333333221  1479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06949 short chain dehydrogenase; Provisional

Probab=97.39  E-value=0.0014  Score=56.45  Aligned_cols=81  Identities=25%  Similarity=0.321  Sum_probs=56.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Ceee--eCCChhhHHHHHHHhC--CCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-DDAF--NYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~~v~--~~~~~~~~~~~v~~~~--~g~  221 (339)
                      ..+.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.+.+   +. ..++  |..+.+++.+.+.+..  .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999889999999999988766554232   21 1222  3333223333333322  237


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        87 ~d~li~~ag   95 (258)
T PRK06949         87 IDILVNNSG   95 (258)
T ss_pred             CCEEEECCC
Confidence            999999988

>PRK05867 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0011  Score=56.95  Aligned_cols=80  Identities=23%  Similarity=0.295  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.++||+|++|++|.++++.+...|++|+++.++.++.+.+.+++   +.. .  ..|..+.+.+.+.+.++..  +++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999998889999999999887766554333   221 1  2343433233333333321  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++.+.|
T Consensus        88 d~lv~~ag   95 (253)
T PRK05867         88 DIAVCNAG   95 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0013  Score=57.00  Aligned_cols=80  Identities=18%  Similarity=0.228  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+|++|++|..+++.+...|++|++++++.++.+.+.+.+   +.. .+  .|..+.+.+.+.+.+...  +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999887765544232   221 22  344443123333333221  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        89 d~vi~~Ag   96 (263)
T PRK07814         89 DIVVNNVG   96 (263)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0012  Score=57.06  Aligned_cols=80  Identities=15%  Similarity=0.169  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG-----FD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.+++|+|++|++|.++++.+...|++|+++.+++++.+.+.+++.     .. .+  .|..+.+++...+.++..  +
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999888999999999998877655543332     11 11  233333233333433322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        86 ~id~li~~ag   95 (260)
T PRK07063         86 PLDVLVNNAG   95 (260)
T ss_pred             CCcEEEECCC
Confidence            7999999887

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.37  E-value=0.0021  Score=56.49  Aligned_cols=150  Identities=17%  Similarity=0.190  Sum_probs=85.3

Q ss_pred             CCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Q 037444           88 IQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQL  167 (339)
Q Consensus        88 v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~  167 (339)
                      -..+.+|++.+...+|.++-..+... .+.+ ..+  +.|....-+...+ ...+|.+  ...++++||-.|. |. |..
T Consensus       103 ~~p~~~g~~~~i~p~w~~~~~~~~~~-~i~l-dpg--~aFgtG~h~tt~l-~l~~l~~--~~~~g~~VLDvGc-Gs-G~l  173 (288)
T TIGR00406       103 FHPVQFGKRFWICPSWRDVPSDEDAL-IIML-DPG--LAFGTGTHPTTSL-CLEWLED--LDLKDKNVIDVGC-GS-GIL  173 (288)
T ss_pred             CCCEEEcCeEEEECCCcCCCCCCCcE-EEEE-CCC--CcccCCCCHHHHH-HHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence            34467888777776665553322233 5555 333  3332222211111 1122322  2457899999984 44 887


Q ss_pred             HHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh----hHHHHHH
Q 037444          168 VGQFAKLAGC-YVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK----MLDAVLL  239 (339)
Q Consensus       168 ai~la~~~ga-~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~----~~~~~~~  239 (339)
                      ++.+++ +|+ +|+++..++...+.+++..   +....+..... +    ......+++|+|+......    .+....+
T Consensus       174 ai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~  247 (288)
T TIGR00406       174 SIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVANILAEVIKELYPQFSR  247 (288)
T ss_pred             HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEEecCHHHHHHHHHHHHH
Confidence            777665 566 8999999988777776322   22111111111 1    1112234899999866533    4567789


Q ss_pred             hhccCCEEEEEec
Q 037444          240 NMRLRGRIAVCGM  252 (339)
Q Consensus       240 ~l~~~G~~v~~g~  252 (339)
                      .|+++|.++..|.
T Consensus       248 ~LkpgG~li~sgi  260 (288)
T TIGR00406       248 LVKPGGWLILSGI  260 (288)
T ss_pred             HcCCCcEEEEEeC
Confidence            9999999988764

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0017  Score=56.22  Aligned_cols=83  Identities=23%  Similarity=0.316  Sum_probs=56.2

Q ss_pred             CCCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCCee----eeCCChhhHHHHHHHhC-
Q 037444          149 PKKGEYVYVSAASG-AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK----FGFDDA----FNYKEEPDLDAALKRCF-  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g-~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~v~~~~-  218 (339)
                      +..+.+++|+|++| ++|.++++.+...|++|+++.++.++.+...+.    ++...+    .|..+.+++...+.+.. 
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            44678999999986 899999999999999999999887765544322    343222    24444313333333322 


Q ss_pred             -CCCccEEEECCCh
Q 037444          219 -PQGIDIYFENVGG  231 (339)
Q Consensus       219 -~g~~d~vid~~g~  231 (339)
                       .+++|++|++.|.
T Consensus        94 ~~g~id~li~~ag~  107 (262)
T PRK07831         94 RLGRLDVLVNNAGL  107 (262)
T ss_pred             HcCCCCEEEECCCC
Confidence             1479999999983

>PRK05854 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0013  Score=58.53  Aligned_cols=80  Identities=16%  Similarity=0.181  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.+++|+||++++|.++++.+...|++|++++++.++.+.+.+++     +.. .+  +|-.+.++..+.+.++..  +
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999888889999999999987765443233     111 12  244333133333333322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      .+|++|++.|
T Consensus        93 ~iD~li~nAG  102 (313)
T PRK05854         93 PIHLLINNAG  102 (313)
T ss_pred             CccEEEECCc
Confidence            7999999887

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.36  E-value=0.0014  Score=56.21  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CC---eeeeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG--FD---DAFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+.  ..   ...|..+.+.+...+.+...  +++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45689999999999999999888889999999999887665543433  11   12233333233333333211  3799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.36  E-value=0.0014  Score=57.29  Aligned_cols=81  Identities=20%  Similarity=0.174  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+..+.. .  ..|..+.+.+.+.+.+...  +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3568999999999999999988888999999999988776665222221 1  2244433133333333322  369999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999874

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0047  Score=53.76  Aligned_cols=78  Identities=12%  Similarity=0.161  Sum_probs=52.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--e--eeeCCChhhHHHHHHHhCC--CCccE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD--D--AFNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~--~--v~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      +++|+||+|++|..+++.+...|++|+++.+++++.+.+.++   .+..  .  ..|..+.+.+.+.+.++..  +++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999998888999999999887765444322   2332  1  2454443133322333221  36999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      +|++.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999973

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.0017  Score=55.84  Aligned_cols=80  Identities=15%  Similarity=0.263  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--e--eeCCChhhHHHHHHHhCC--CCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--A--FNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v--~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      .+.++||+||+|++|..+++.+...|++|+.++++.+..+... ++....  .  .|-.+...+...+.+...  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999999999999999888889999999998876544444 332211  2  233333133333333221  37999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      +|.+.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999873

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.32  E-value=0.0017  Score=55.91  Aligned_cols=80  Identities=25%  Similarity=0.367  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+||+|++|..+++.+...|++|+.+++++++.+.+.+++   +.. ..  .|..+.+...+.+.++..  +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999988889999999999888766554333   322 12  233333133333333322  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        85 d~li~~ag   92 (254)
T PRK07478         85 DIAFNNAG   92 (254)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0015  Score=56.22  Aligned_cols=80  Identities=23%  Similarity=0.246  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---eeeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD---DAFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +..   ...|..+.+.+...+.+...  +.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            5678999999999999999988899999999999887765554333   221   12343333233333333321  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        84 d~vi~~ag   91 (258)
T PRK07890         84 DALVNNAF   91 (258)
T ss_pred             cEEEECCc
Confidence            99999887

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.28  E-value=0.006  Score=52.67  Aligned_cols=80  Identities=13%  Similarity=0.150  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHH---HHHHHHHhCCCeee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKEK---VDLLKNKFGFDDAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~~---~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+  +++|.++++.+...|++|+++.++.+.   .+.+.++++....+  |-.+.++..+.+.++..  |+
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  499999998888899999999887543   23333244432222  33332233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        89 ld~lv~nAg   97 (258)
T PRK07533         89 LDFLLHSIA   97 (258)
T ss_pred             CCEEEEcCc
Confidence            999999886

>PRK09291 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0022  Score=55.20  Aligned_cols=75  Identities=15%  Similarity=0.268  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCCCCccEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      +.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.   .+.. .+  .|..+.    +.+.....+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence            45799999999999999999999999999999987766555422   2221 12  233332    23444334479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99987

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0019  Score=54.75  Aligned_cols=80  Identities=11%  Similarity=0.152  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCe-eeeCCChhhHHHHHHHhCC--CCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFDD-AFNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      ++.++||+|++|.+|..+++.+...|++|+++.++.++.....+++   +... ..|..+..++.+.+.+...  +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4789999999999999999988888999999998776533222122   2221 1233332133333333222  37999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|++.|
T Consensus        86 vi~~ag   91 (239)
T PRK12828         86 LVNIAG   91 (239)
T ss_pred             EEECCc
Confidence            999887

>PRK09186 flagellin modification protein A; Provisional

Probab=97.27  E-value=0.0021  Score=55.33  Aligned_cols=80  Identities=19%  Similarity=0.242  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC--e--eeeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD--D--AFNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~--~--v~~~~~~~~~~~~v~~~~~--g  220 (339)
                      ++.++||+||+|++|..++..+...|++|++++++.++.+.+.+++    +..  .  ..|-.+.+.+.+.+.+...  +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999998889999999999887765544343    221  1  2244433233333443322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6999999885

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0018  Score=54.92  Aligned_cols=80  Identities=18%  Similarity=0.319  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Ceee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.+++|+||+|.+|..+++.+...|++|+++.+++++.+.+.+++..   -+.+  |..+..++.+.+.++..  +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468899999999999999988888899999999988776655434432   1222  33333234444443321  3799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        85 ~vi~~ag   91 (237)
T PRK07326         85 VLIANAG   91 (237)
T ss_pred             EEEECCC
Confidence            9999876

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.0026  Score=53.62  Aligned_cols=76  Identities=12%  Similarity=0.170  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +++|+||+|++|.++++.+...|++|+.+.++.++.+.+.++++... ..|..+.+++.+.+.++. +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            58999999999999999888889999999999887766653555432 234444323333333332 26899998764

>PRK05717 oxidoreductase; Validated

Probab=97.26  E-value=0.0024  Score=54.95  Aligned_cols=80  Identities=18%  Similarity=0.240  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.+++|+|++|++|..++..+...|++|+++.++.++.+.+.+.++.. .  ..|..+...+.+.+.++..  +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999999999999999888888999999988876655444245432 1  2333333133333333322  369999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        89 i~~ag   93 (255)
T PRK05717         89 VCNAA   93 (255)
T ss_pred             EECCC
Confidence            99887

>PRK06194 hypothetical protein; Provisional

Probab=97.26  E-value=0.002  Score=56.54  Aligned_cols=81  Identities=14%  Similarity=0.258  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.+..+.+.+++   +.. .++  |..+.+++.+.+.+..  .+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999988889999999998876654443233   322 122  3333213333333321  1368


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.26  E-value=0.002  Score=56.30  Aligned_cols=80  Identities=20%  Similarity=0.328  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+|++|++|.++++.+...|++|+++.++.++.+.+.+++   +.. .  ..|-.+..++.+.+.+...  +.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999988889999999998877665443233   322 1  1233333233333333221  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        85 d~li~nAg   92 (275)
T PRK05876         85 DVVFSNAG   92 (275)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.26  E-value=0.0023  Score=55.10  Aligned_cols=81  Identities=22%  Similarity=0.298  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.+++++.+.+.+.+   |.. ..  .|..+.+++.+.+.+..  .+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999888888999999998877654443232   321 12  24444323333333322  2379


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06953 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.003  Score=53.18  Aligned_cols=78  Identities=15%  Similarity=0.177  Sum_probs=55.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      .+++|+|++|++|..+++.+...|++|+++.++.++.+.++ ..+.. ...|-.+.+.+...+.++.++++|++|.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            37999999999999999888788999999999888777766 55543 23344443233333333333379999998774

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=97.25  E-value=0.0026  Score=56.87  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---D-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++..   . ..  .|-.+...+...+.++.  .+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            467899999999999999988888899999999998876655535432   1 12  24333313333333322  2369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999887

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.25  E-value=0.00054  Score=64.35  Aligned_cols=96  Identities=17%  Similarity=0.166  Sum_probs=66.2

Q ss_pred             HhcCCCCCCEEE----EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVY----VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vl----I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ...++++|+++|    |+||+|++|.+++|+++.+|++|+++...+.+....+ ..+.+ .++|.+.. ...+.+.... 
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~-  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY-  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH-
Confidence            346788999998    9999999999999999999999999886655333222 33333 35555543 3334443221 


Q ss_pred             CCccEEEECCChhhHHHHHHhhccCCEEEEEecccc
Q 037444          220 QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       220 g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                                  ..+...++.|.++|+++.++....
T Consensus       104 ------------~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261        104 ------------EFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             ------------HHHHHHHHhccCCCEEEEEccccc
Confidence                        345567788888889888876543

>PRK06128 oxidoreductase; Provisional

Probab=97.25  E-value=0.0052  Score=54.34  Aligned_cols=104  Identities=18%  Similarity=0.239  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHH----HHHHHhCCCe-e--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--KVD----LLKNKFGFDD-A--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~--~~~----~~~~~~g~~~-v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.+  +.+    .++ ..|... +  .|-.+...+.+.+.++..  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999888889999988775432  122    222 334321 2  233333133333333322  


Q ss_pred             CCccEEEECCChh---------------------------hHHHHHHhhccCCEEEEEecccc
Q 037444          220 QGIDIYFENVGGK---------------------------MLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       220 g~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      +++|++|++.|..                           ..+.++..++.+|+++.+++...
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence            4799999988731                           01223445566789988876544

>PRK07024 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0033  Score=54.22  Aligned_cols=79  Identities=18%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---e--eeeCCChhhHHHHHHHhCC--CCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---D--AFNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      +.+++|+|++|++|..+++.+...|++|+++.++.++.+.+.+++...   .  .+|..+.+.+.+.+.++..  +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            458999999999999999888888999999999888776655333221   1  2244433234443343322  36899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|++.|
T Consensus        82 lv~~ag   87 (257)
T PRK07024         82 VIANAG   87 (257)
T ss_pred             EEECCC
Confidence            999887

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.22  E-value=0.0032  Score=53.94  Aligned_cols=80  Identities=16%  Similarity=0.294  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+|++|++|..+++.+...|++|+++.++.++.+.+.++   .+.. .  ..|-.+...+.+.+.....  +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999888999999999887765444322   2332 1  2233332133333333322  368


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.21  E-value=0.0025  Score=54.97  Aligned_cols=78  Identities=27%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFDDA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      ++||+|+++++|.++++.+...|++|+++.+++++.+.+.+++   +..+.  .|-.+.+++.+.+.+...  +++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            6999999999999999888889999999999887765554333   22222  233333234444443322  4799999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      ++.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            98873

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.20  E-value=0.0023  Score=55.01  Aligned_cols=79  Identities=18%  Similarity=0.192  Sum_probs=54.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Ceee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-DDAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      |.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+.+   +. ...+  |-.+...+.+.+.+...  +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999889999999999887665554232   22 1223  33333233333333322  4699


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        81 ~lI~~ag   87 (252)
T PRK07677         81 ALINNAA   87 (252)
T ss_pred             EEEECCC
Confidence            9999887

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.20  E-value=0.0017  Score=56.35  Aligned_cols=101  Identities=23%  Similarity=0.277  Sum_probs=62.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      .+.+..++++|++||-+|  .|-|-.++.+|+..|++|++++.|+++.+.+++   +.|....+..... |+    +++.
T Consensus        53 ~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-D~----~~~~  125 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-DY----RDLP  125 (273)
T ss_dssp             HHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES--G----GG--
T ss_pred             HHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-ec----cccC
Confidence            344678899999999999  458888999999999999999999998887764   2343211111111 22    1111


Q ss_pred             CCCccEEEE-----CCChh----hHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFE-----NVGGK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  250 (339)
                       +.+|.|+.     .+|.+    .+..+.+.|+|+|+++.-
T Consensus       126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence             26888865     34422    477888999999998743

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.20  E-value=0.0031  Score=54.05  Aligned_cols=77  Identities=19%  Similarity=0.354  Sum_probs=54.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      +++|+|++|++|.++++.+...|++|+++++++++.+.+.+.++.. ..  .|-.+...+.+.+.++..  +++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999999998889999999999988877665345432 12  233332133333333322  379999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        82 ag   83 (248)
T PRK10538         82 AG   83 (248)
T ss_pred             CC
Confidence            86

>PRK06197 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0022  Score=56.86  Aligned_cols=80  Identities=20%  Similarity=0.233  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++     +.. ..  +|-.+..++...+.++..  +
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5689999999999999999888888999999999877654432222     111 12  233333133333443322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|.+.|
T Consensus        95 ~iD~li~nAg  104 (306)
T PRK06197         95 RIDLLINNAG  104 (306)
T ss_pred             CCCEEEECCc
Confidence            7999999887

>PRK08703 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.004  Score=52.96  Aligned_cols=80  Identities=20%  Similarity=0.292  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-C---eeeeCC---Ch--hhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-D---DAFNYK---EE--PDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~---~v~~~~---~~--~~~~~~v~~~~  218 (339)
                      ++.+++|+|++|++|..+++.+...|++|+++++++++.+.+.+++   +. .   ..+|..   ..  ..+.+.+....
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            4679999999999999999888889999999999987765554232   21 1   112322   11  02233344333


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      .+.+|++|.+.|
T Consensus        85 ~~~id~vi~~ag   96 (239)
T PRK08703         85 QGKLDGIVHCAG   96 (239)
T ss_pred             CCCCCEEEEecc
Confidence            357899999988

>PRK09242 tropinone reductase; Provisional

Probab=97.18  E-value=0.0027  Score=54.65  Aligned_cols=81  Identities=20%  Similarity=0.268  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-e--eeeCCChhhHHHHHHHhC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-D--AFNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~v~~~~--~g  220 (339)
                      .|.+++|+|++|++|..+++.+...|++|++++++.++.+.+.+++     +.. .  ..|..+.+++...+.++.  -+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999889999999999887765554332     221 1  123333323333333332  14


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999974

>PLN02253 xanthoxin dehydrogenase

Probab=97.18  E-value=0.0033  Score=54.94  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-e--eeeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D-D--AFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++++..+.+.++++.  . .  ..|-.+.+.+.+.+.+...  +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999988888899999999887665544434432  1 1  2344443233333333222  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        97 ~li~~Ag  103 (280)
T PLN02253         97 IMVNNAG  103 (280)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06484 short chain dehydrogenase; Validated

Probab=97.18  E-value=0.0026  Score=60.88  Aligned_cols=81  Identities=23%  Similarity=0.307  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      ++.+++|+|+++++|.++++.+...|++|+.+.++.++.+.+.++++..   ..+|..+.+++.+.+.++..  +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999999999988876665466643   12344443244444444322  479999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.15  E-value=0.0031  Score=53.96  Aligned_cols=80  Identities=21%  Similarity=0.270  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .|.+++|+||+|++|..+++.+...|++|++++++...  .+.++ +.+.. .+  .|..+.+++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999998888899999999986532  22333 44432 12  243333244444443322  3799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|++.|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99998863

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.14  E-value=0.0035  Score=54.00  Aligned_cols=80  Identities=21%  Similarity=0.314  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+|++|++|..+++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++...+.++..  +.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999999999999999999889999999999988776665455432 11  233332133333333321  369999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +.+.|
T Consensus        85 i~~ag   89 (257)
T PRK07067         85 FNNAA   89 (257)
T ss_pred             EECCC
Confidence            99876

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.14  E-value=0.0037  Score=53.80  Aligned_cols=83  Identities=11%  Similarity=0.109  Sum_probs=53.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHH-HHHHHHHh---CC--Ceee--eCCChhhHHHHHHHhCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEK-VDLLKNKF---GF--DDAF--NYKEEPDLDAALKRCFP  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~-~~~~~~~~---g~--~~v~--~~~~~~~~~~~v~~~~~  219 (339)
                      +..+.++||+||+|++|.++++.+... |++|+++.+++++ .+.+.+++   +.  .+++  |..+..+..+.+.+...
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            456789999999999999998776666 5899999988764 44332232   32  1222  33332133333444332


Q ss_pred             -CCccEEEECCCh
Q 037444          220 -QGIDIYFENVGG  231 (339)
Q Consensus       220 -g~~d~vid~~g~  231 (339)
                       +++|+++.+.|.
T Consensus        85 ~g~id~li~~ag~   97 (253)
T PRK07904         85 GGDVDVAIVAFGL   97 (253)
T ss_pred             cCCCCEEEEeeec
Confidence             479999987763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.14  E-value=0.0035  Score=54.09  Aligned_cols=80  Identities=25%  Similarity=0.351  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+|++|++|..+++.+...|++|++++++.++.+.+.+.+   +.. .  ..|..+.+.+.+.+.++..  +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999888889999999999887765554232   221 1  2244433233333333222  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        91 d~vi~~ag   98 (259)
T PRK08213         91 DILVNNAG   98 (259)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0035  Score=54.62  Aligned_cols=78  Identities=21%  Similarity=0.325  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .++||+||+|++|..+++.+...|++|+++.++.++.+.+++..+.. .  ..|..+...+.+.+.+...  +++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999888888999999999988877766333321 1  2333333133333433321  37899999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        83 ~ag   85 (276)
T PRK06482         83 NAG   85 (276)
T ss_pred             CCC
Confidence            887

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.13  E-value=0.0093  Score=48.63  Aligned_cols=105  Identities=16%  Similarity=0.305  Sum_probs=73.4

Q ss_pred             CCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhh---HHHHHHHhCCCCccEEE
Q 037444          152 GEYVYVSAA-SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPD---LDAALKRCFPQGIDIYF  226 (339)
Q Consensus       152 g~~vlI~ga-~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~---~~~~v~~~~~g~~d~vi  226 (339)
                      ...|||+|. .|++|+++..-....|+.|+++.|+-+..+.+..++|. ..-+|-.++++   +...++..+.|+.|+.+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            346888864 57999998888888899999999999987776657776 23345444313   34556666677999999


Q ss_pred             ECCChh-----------hHHH----------------HHHhhccCCEEEEEeccccc
Q 037444          227 ENVGGK-----------MLDA----------------VLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       227 d~~g~~-----------~~~~----------------~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +..|.+           ..++                ..-+.+..|++|.+|+..+.
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~  143 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV  143 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence            977632           1111                22356678999999886654

>PRK12367 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0039  Score=53.42  Aligned_cols=75  Identities=21%  Similarity=0.306  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.+++|+||+|++|.++++.+...|++|+++.++..+..... ..+....  .|..+.    +.+.+.. +++|++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~----~~~~~~~-~~iDilVnn   86 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKE----ESLDKQL-ASLDVLILN   86 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCH----HHHHHhc-CCCCEEEEC
Confidence            3679999999999999999988889999999998763211111 1111222  233332    2233322 369999999


Q ss_pred             CCh
Q 037444          229 VGG  231 (339)
Q Consensus       229 ~g~  231 (339)
                      .|.
T Consensus        87 AG~   89 (245)
T PRK12367         87 HGI   89 (245)
T ss_pred             Ccc
Confidence            873

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.0028  Score=54.34  Aligned_cols=81  Identities=17%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCC-eee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--GFD-DAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      ++.+++|+|++|++|..+++.+...|++|+.++++.++.+...+.+  +.. ..+  |-.+...+.+.+.++..  +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999888788999999999887655544233  221 222  33333133333333322  4799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK08589 short chain dehydrogenase; Validated

Probab=97.12  E-value=0.0032  Score=54.80  Aligned_cols=79  Identities=20%  Similarity=0.290  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++ ++.+.+.+++   +.. .  ..|..+..++...+.++..  +++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            46799999999999999998888889999999988 4443332233   321 1  2344433233333333321  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        84 d~li~~Ag   91 (272)
T PRK08589         84 DVLFNNAG   91 (272)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.004  Score=53.82  Aligned_cols=81  Identities=25%  Similarity=0.330  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Cee--eeCCChhhHHHHHHHhC-CCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--GF-DDA--FNYKEEPDLDAALKRCF-PQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--g~-~~v--~~~~~~~~~~~~v~~~~-~g~~d~  224 (339)
                      ++.++||+||+|++|..+++.+...|++|+++++++++.+.+.+++  +. ...  .|..+...+.+.+.... .+.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999988889999999999988766665343  11 112  23333212222222221 247999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      ++++.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999874

>PRK08643 acetoin reductase; Validated

Probab=97.11  E-value=0.0033  Score=54.06  Aligned_cols=79  Identities=15%  Similarity=0.187  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      +.++||+|++|++|..+++.+...|++|++++++.++.+.+.+++   +.. .  ..|..+.+.+.+.+.++..  +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            568999999999999999998889999999999887655444232   221 1  1233333233333333321  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        82 ~vi~~ag   88 (256)
T PRK08643         82 VVVNNAG   88 (256)
T ss_pred             EEEECCC
Confidence            9999886

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.11  E-value=0.019  Score=47.25  Aligned_cols=78  Identities=22%  Similarity=0.281  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CC-eeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG----FD-DAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      ++.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+.+.    .. ...+..+.+++.+.+     .++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI-----KGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH-----hcCCEE
Confidence            57899999999999999888888889999999999887766653442    21 112222211222322     258999


Q ss_pred             EECCChhh
Q 037444          226 FENVGGKM  233 (339)
Q Consensus       226 id~~g~~~  233 (339)
                      |.+.....
T Consensus       102 i~at~~g~  109 (194)
T cd01078         102 FAAGAAGV  109 (194)
T ss_pred             EECCCCCc
Confidence            99887554

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0034  Score=54.28  Aligned_cols=80  Identities=21%  Similarity=0.316  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      +.++||+||+|++|..+++.+...|++|+++++++++.+.+.+.+   +.. .+  .|..+...+...+.+...  +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357999999999999999988889999999999877655443222   321 11  233332133333333322  3699


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999873

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0034  Score=54.79  Aligned_cols=80  Identities=18%  Similarity=0.262  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC---Cee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGF---DDA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~---~~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.   .+.   .++  .|..+..++.. +.+...  +
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            356899999999999999988888899999999988766554322   221   112  24444323333 444322  4


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|+++.+.|.
T Consensus        81 ~id~vv~~ag~   91 (280)
T PRK06914         81 RIDLLVNNAGY   91 (280)
T ss_pred             CeeEEEECCcc
Confidence            78999999873

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.10  E-value=0.0047  Score=53.08  Aligned_cols=80  Identities=23%  Similarity=0.305  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+|++|.+|..+++.+...|++|+++.++.++.+.+.+++   +.. +  ..|..+..++.+.+.++.  .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999888888999999999887765443232   322 1  224343323333333322  1379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        83 d~vi~~a~   90 (258)
T PRK12429         83 DILVNNAG   90 (258)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07774 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0038  Score=53.41  Aligned_cols=80  Identities=19%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+.+   +.. .  ..|..+...+...+.+...  +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999888888999999999876654443232   211 1  2333332122222222211  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (250)
T PRK07774         85 DYLVNNAA   92 (250)
T ss_pred             CEEEECCC
Confidence            99999888

>PRK08251 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0039  Score=53.34  Aligned_cols=79  Identities=15%  Similarity=0.247  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+.+     +.. ++  .|..+.+.+.+.+.++..  ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999988888788999999999887765554222     211 22  244443233333433322  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999887

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.10  E-value=0.0046  Score=50.16  Aligned_cols=90  Identities=22%  Similarity=0.270  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      --.|.+|.|+|- |.+|+.++++++.+|++|++..++........ ..+..    +.   ++.+.+.+     .|+|+.+
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~~----~~---~l~ell~~-----aDiv~~~   98 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGVE----YV---SLDELLAQ-----ADIVSLH   98 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTEE----ES---SHHHHHHH------SEEEE-
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccce----ee---ehhhhcch-----hhhhhhh
Confidence            346899999995 99999999999999999999999887655343 44431    11   44444443     7999988


Q ss_pred             CCh-h-----hHHHHHHhhccCCEEEEEec
Q 037444          229 VGG-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       229 ~g~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ... +     .-...+..++++..+|.++.
T Consensus        99 ~plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   99 LPLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             hccccccceeeeeeeeeccccceEEEeccc
Confidence            872 2     22467888998888888754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.09  E-value=0.011  Score=50.91  Aligned_cols=80  Identities=11%  Similarity=0.078  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCC--e--eeeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK---EKVDLLKNKFGFD--D--AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~---~~~~~~~~~~g~~--~--v~~~~~~~~~~~~v~~~~~--  219 (339)
                      .|.+++|+||+  +++|.++++.+...|++|+.+.++.   ++.+.+.+++...  .  ..|-.+.++..+.+.++..  
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            46899999997  7999999988888999999987543   3444444344211  1  2344443234444444332  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      |++|+++++.|
T Consensus        86 g~ld~lv~nag   96 (257)
T PRK08594         86 GVIHGVAHCIA   96 (257)
T ss_pred             CCccEEEECcc
Confidence            47999999876

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.08  E-value=0.0042  Score=52.76  Aligned_cols=78  Identities=14%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      +.++||+|+++++|..+++.+...|++|+++.+++++. +.++ ..+... ..|..+.+++.+.+.++..  +++|++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            45899999999999999998888999999999876543 3333 455321 2233332233444444322  36999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        81 ~ag   83 (236)
T PRK06483         81 NAS   83 (236)
T ss_pred             CCc
Confidence            887

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.08  E-value=0.0037  Score=53.15  Aligned_cols=81  Identities=20%  Similarity=0.267  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++   +.. .+  .|..+...+.+.+++...  +++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            3578999999999999999888889999999999877654433222   221 12  233333233444443322  379


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999998873

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0049  Score=53.72  Aligned_cols=80  Identities=13%  Similarity=0.091  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CC-eee--eCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG-----FD-DAF--NYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g-----~~-~v~--~~~~~~~~~~~v~~~~~--g  220 (339)
                      ++.++||+|++|++|..+++.+...|++|++++++.++.+...+++.     .. .++  |-.+.+++.+.+.+...  +
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999998899999999998776544432321     11 222  33332133333333322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|.+.|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0037  Score=53.67  Aligned_cols=81  Identities=15%  Similarity=0.176  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.+++|+|++|++|..+++.+...|++|+++.+++++.+.+.+   +.+.. ..  .|..+..++.+.+.+..  -+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999999998876544432   22321 22  23333213333333321  1478


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0047  Score=53.85  Aligned_cols=80  Identities=21%  Similarity=0.246  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      +.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++.. ..  .|..+...+.+.+.....  +++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            458999999999999999888888999999999988776665333321 12  233332133333333221  4789999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      .+.|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99873

>PRK08862 short chain dehydrogenase; Provisional

Probab=97.07  E-value=0.0039  Score=52.75  Aligned_cols=80  Identities=8%  Similarity=0.096  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--C-C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--Q-G  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g-~  221 (339)
                      +|.+++|+|+++++|.+++..+...|++|+++.++.++.+.+.++   .+.. ..  .|-.+.+.+.+.+.+...  + .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467999999999999999888888999999999988876554322   2432 11  233333133333333321  4 7


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|.+.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.06  E-value=0.0047  Score=53.76  Aligned_cols=80  Identities=11%  Similarity=0.138  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEKV---DLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||++  ++|.++++.+...|++|+++.++++..   +.+.+++|....  .|-.+.+++...+.+...  |.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            568899999986  999999998888999999988765322   223223453322  344443233344443322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        86 iD~lVnnAG   94 (271)
T PRK06505         86 LDFVVHAIG   94 (271)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.06  E-value=0.0046  Score=53.98  Aligned_cols=105  Identities=10%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.+++|+||+  +++|.++++.+...|++|+.+.++.+   +.+.+.++++....  .|-.+.+.+...+.++..  |+
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999997  79999999888889999999988753   33333324553322  344443234444444332  47


Q ss_pred             ccEEEECCChh---------------h---------------HHHHHHhhccCCEEEEEecccc
Q 037444          222 IDIYFENVGGK---------------M---------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       222 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      +|++|++.|..               .               .+..+..+..+|+++.+++..+
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~  147 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG  147 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence            99999998831               0               1234456667899998876443

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.06  E-value=0.01  Score=47.57  Aligned_cols=97  Identities=22%  Similarity=0.378  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHhCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .++++|+.++=.|+  +.|..++++|+.. ..+||++.++++..+..++   +||.+.  ++..+.+    +.+....  
T Consensus        30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap----~~L~~~~--  101 (187)
T COG2242          30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP----EALPDLP--  101 (187)
T ss_pred             hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch----HhhcCCC--
Confidence            57889998777774  6688889999544 4599999999887766542   577653  4433332    2332221  


Q ss_pred             CccEEEECCCh---hhHHHHHHhhccCCEEEEEe
Q 037444          221 GIDIYFENVGG---KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       221 ~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+|.+|=--|.   ..++.+|..|+++|++|.-.
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            58999855443   27889999999999998653

>PRK07035 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.0044  Score=53.17  Aligned_cols=80  Identities=20%  Similarity=0.318  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|++|++|.++++.+...|++|+.+.++.++.+.+.+++   +.. ..+  |..+..+....+.+...  +.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999889999999999877665544332   221 122  33332133333333322  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        87 d~li~~ag   94 (252)
T PRK07035         87 DILVNNAA   94 (252)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06720 hypothetical protein; Provisional

Probab=97.04  E-value=0.0056  Score=49.15  Aligned_cols=80  Identities=16%  Similarity=0.231  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+..++|+||++++|..++..+...|++|+++.++.+..+.+.+++   +.. ..+  |..+..++.+.+.+..  -|++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5779999999999999999888888999999998876654432232   432 122  3222212333332221  1478


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        95 DilVnnAG  102 (169)
T PRK06720         95 DMLFQNAG  102 (169)
T ss_pred             CEEEECCC
Confidence            99998887

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.03  E-value=0.0056  Score=52.08  Aligned_cols=81  Identities=22%  Similarity=0.324  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe-e--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD-A--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+|++|++|..+++.+...|.+|+++.+++++.+.+.+   ..+... .  .|..+...+.+.+.++..  +.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999888889999999998876544332   233321 2  244333233343433321  368


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |.++.+.|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999864

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.03  E-value=0.0085  Score=53.45  Aligned_cols=94  Identities=17%  Similarity=0.241  Sum_probs=61.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee-eCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF-NYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|+|+||+|-+|..+++.+...|.+|.+++++.++...+. ..+...+. |..+.    +.+.+... ++|+||++.+..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~----~~l~~al~-g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLP----ETLPPSFK-GVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCH----HHHHHHHC-CCCEEEECCCCC
Confidence            6999999999999999998888999999999877655554 44543221 22222    22333322 589999987631


Q ss_pred             ----------h---HHHHHHhhccCC--EEEEEecc
Q 037444          233 ----------M---LDAVLLNMRLRG--RIAVCGMI  253 (339)
Q Consensus       233 ----------~---~~~~~~~l~~~G--~~v~~g~~  253 (339)
                                .   ....++.++..|  +++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                      0   123344444444  78877663

>PRK06125 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.0049  Score=53.15  Aligned_cols=78  Identities=21%  Similarity=0.351  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCCCCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .+.+++|+|+++++|..+++.+...|++|++++++.++.+.+.+++    +.. ..  .|-.+.+++.+.+...  +++|
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id   83 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID   83 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence            4689999999999999999988889999999999887765544233    221 22  2333321333333322  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        84 ~lv~~ag   90 (259)
T PRK06125         84 ILVNNAG   90 (259)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.003  Score=54.82  Aligned_cols=77  Identities=19%  Similarity=0.356  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      +.+++|+||+|++|..+++.+...|++|++++++.++.+...   +.. ...|..+.+++.+.+.....  +.+|++|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP---GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC---CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            568999999999999999888888999999998866543221   222 12344443244444444322  479999999


Q ss_pred             CCh
Q 037444          229 VGG  231 (339)
Q Consensus       229 ~g~  231 (339)
                      .|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            983

>PRK07454 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0054  Score=52.24  Aligned_cols=81  Identities=16%  Similarity=0.245  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+.+   +.. .++  |-.+.+.+...+..+..  +++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999889999999999887665554222   221 122  33332133333333322  369


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK06198 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0044  Score=53.43  Aligned_cols=81  Identities=14%  Similarity=0.151  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+|++|++|..+++.+...|++ |+++.++.++.....+   ..+..   ..+|..+.+.+.+.+.....  ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5678999999999999999999999998 9999988765543221   23332   12344443133333332211  36


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999873

>PRK07074 short chain dehydrogenase; Provisional

Probab=97.01  E-value=0.0067  Score=52.19  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD--DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +.+++|+||+|++|..++..+...|++|++++++.++.+.+.+.+...  +.  .|-.+.+.+...+.+...  +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999888888999999999888766554344211  12  233333133333333321  369999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999973

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.01  E-value=0.0046  Score=53.20  Aligned_cols=79  Identities=14%  Similarity=0.097  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD--DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.+++|+||+  +++|.++++.+...|++|+++.++++..+.++ ++...  ..  .|-.+.++..+.+.++..  +.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999998  79999999888889999999988744333344 43221  11  233333233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        85 D~lv~nAg   92 (252)
T PRK06079         85 DGIVHAIA   92 (252)
T ss_pred             CEEEEccc
Confidence            99999887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.00  E-value=0.0039  Score=54.12  Aligned_cols=81  Identities=23%  Similarity=0.354  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC------eeeeCCChhhHHH---HHHHh
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG---FD------DAFNYKEEPDLDA---ALKRC  217 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~~~---~v~~~  217 (339)
                      -.|..++|+|++.++|.+++..+...|++|+++.+++++.+...+++.   ..      .+.|-...++..+   ...+.
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            367889999999999999999999999999999999988666553322   21      1223333212222   22233


Q ss_pred             CCCCccEEEECCC
Q 037444          218 FPQGIDIYFENVG  230 (339)
Q Consensus       218 ~~g~~d~vid~~g  230 (339)
                      ..|++|+.++..|
T Consensus        86 ~~GkidiLvnnag   98 (270)
T KOG0725|consen   86 FFGKIDILVNNAG   98 (270)
T ss_pred             hCCCCCEEEEcCC
Confidence            3468999999887

>PRK07985 oxidoreductase; Provisional

Probab=97.00  E-value=0.0096  Score=52.53  Aligned_cols=105  Identities=15%  Similarity=0.122  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.  ++.+.+.+   +.+.. .  ..|-.+.+.+.+.+.+...  +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            567999999999999999998888999999876542  23333321   22321 1  2243433233344443322  4


Q ss_pred             CccEEEECCChh---------------------------hHHHHHHhhccCCEEEEEecccc
Q 037444          221 GIDIYFENVGGK---------------------------MLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       221 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ++|+++.+.|..                           .++.++..++.+|++|.+++...
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~  189 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence            799999987621                           01233444556789998877544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.00  E-value=0.0052  Score=52.82  Aligned_cols=80  Identities=21%  Similarity=0.379  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|+.+.++.++.+.+.+++   +.. ..  .|-.+.+.+.+.+.++..  +++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999888889999999998877655443233   221 12  233333133333333221  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++.+.|
T Consensus        88 d~vi~~ag   95 (254)
T PRK08085         88 DVLINNAG   95 (254)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.012  Score=50.20  Aligned_cols=80  Identities=18%  Similarity=0.160  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      ++.+++|+|++|++|..+++.+...|++|+.+.++.. ..+.+.+   ..+.. ..  .|-.+.+++.+.+.+..  .++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999888776533 2222221   22321 12  23333213333333322  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|.+.|
T Consensus        84 id~vi~~ag   92 (245)
T PRK12937         84 IDVLVNNAG   92 (245)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.99  E-value=0.0055  Score=52.83  Aligned_cols=79  Identities=24%  Similarity=0.269  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---eeeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD---DAFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++...+... ++   +.+   ...|..+.++..+.+.+...  +++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999988889999999998754322222 32   332   12344443233344443322  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        86 d~lv~nAg   93 (260)
T PRK12823         86 DVLINNVG   93 (260)
T ss_pred             eEEEECCc
Confidence            99999987

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.98  E-value=0.0063  Score=52.62  Aligned_cols=80  Identities=13%  Similarity=0.201  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.+++|+||++  ++|.++++.+...|++|+...++++   ..+.+.++.|....  .|-.+.++..+.+.++..  |.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578899999987  8999998888888999999887642   22333223343322  344443234444443322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999876

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.98  E-value=0.0051  Score=52.58  Aligned_cols=81  Identities=19%  Similarity=0.207  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-eee--eCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|.+|..++..+...|++|++++++.++...+.+.   .+.. .++  |..+...+.+.+.+...  +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999988888899999999986654433212   2221 122  33332233333333322  368


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999998863

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.98  E-value=0.0056  Score=52.59  Aligned_cols=79  Identities=19%  Similarity=0.305  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC-e--eeeCCChhhHHHHHHHhC--CCCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFGFD-D--AFNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++...  .+.++ +.+.. .  ..|-.+.+++.+.+.+..  -+++|
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999988999999988765432  22333 44432 1  234444323444444332  24799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      +++++.|
T Consensus        86 ~lv~~ag   92 (251)
T PRK12481         86 ILINNAG   92 (251)
T ss_pred             EEEECCC
Confidence            9999887

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.97  E-value=0.0055  Score=52.83  Aligned_cols=81  Identities=17%  Similarity=0.254  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe-e--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD-A--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+|++|++|..+++.+...|++|+++.+++++.+.+.++   .+... .  .|..+...+.+.+.++.  .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            467999999999999999999889999999999988665444323   33321 1  23333312333333221  1368


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.97  E-value=0.0044  Score=53.31  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHhCC--CeeeeCCChhhHHHHHHHhCC--CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----VDLLKNKFGF--DDAFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~----~~~~~~~~g~--~~v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      -+|+.|||+||++++|.+.++=...+|++++..+.+.+.    .+.++ +.|-  .++.|-++.+++.+..++...  |.
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            378999999999999999877777778888777766543    33333 3342  234454443244444433332  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++++..|
T Consensus       115 V~ILVNNAG  123 (300)
T KOG1201|consen  115 VDILVNNAG  123 (300)
T ss_pred             ceEEEeccc
Confidence            999999887

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0043  Score=53.44  Aligned_cols=79  Identities=15%  Similarity=0.206  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +|.++||+||+|++|..+++.+...|++|+++++++++.+... ++   +.. .  ..|..+.+.+...+.++..  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAE-ELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHH-HHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999888889999999998877654333 32   322 1  2233333233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        85 d~vi~~ag   92 (258)
T PRK08628         85 DGLVNNAG   92 (258)
T ss_pred             CEEEECCc
Confidence            99999998

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.97  E-value=0.0056  Score=53.43  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.+++|+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +.. ..  .|..+..++...+.+...  +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999988889999999999877655443232   321 11  233333133333333222  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.96  E-value=0.0069  Score=51.59  Aligned_cols=80  Identities=24%  Similarity=0.387  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      ++.+++|+||+|++|..+++.+...|+.|+...++.++.+.+.+.++.. .+  .|-.+.+.+.+.+.++..  +++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4679999999999999999888889999998888877766554344432 22  233332133333333221  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        85 i~~ag   89 (245)
T PRK12936         85 VNNAG   89 (245)
T ss_pred             EECCC
Confidence            99987

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.96  E-value=0.0066  Score=52.91  Aligned_cols=82  Identities=13%  Similarity=0.186  Sum_probs=53.8

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCC--
Q 037444          149 PKKGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK---EKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~--  219 (339)
                      +-.+.++||+||+  +++|.++++.+...|++|+.+.+++   ++.+.+.++++...  ..|-.+.++..+.+.++..  
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            4467899999996  7999999998888999999887764   33343433455322  2333333234444443322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|+++++.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            47999999887

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.92  E-value=0.0069  Score=52.09  Aligned_cols=81  Identities=22%  Similarity=0.303  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.++   .+.. ..  .|..+..++...+.+...  +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999988888899999999987765544322   2321 12  233333233444443322  478


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999998873

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=96.92  E-value=0.0091  Score=53.22  Aligned_cols=79  Identities=14%  Similarity=0.171  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--C--ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGF--D--DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~--~--~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      +.+++|+|+++++|.++++.+...| ++|+.++++.++.+.+.++++.  .  ++  +|-.+..++...+.++.  .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999988888889 8999999988876655535532  1  12  24433313333333332  2379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        83 D~lI~nAG   90 (314)
T TIGR01289        83 DALVCNAA   90 (314)
T ss_pred             CEEEECCC
Confidence            99999887

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.91  E-value=0.014  Score=49.74  Aligned_cols=81  Identities=25%  Similarity=0.342  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHH-HHHHH--HhCCCee---eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKV-DLLKN--KFGFDDA---FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~-~~~~~--~~g~~~v---~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ++.+++|+|++|++|..+++.+...|++|++... +..+. +.+.+  ..+....   .|..+.+++.+.+.+...  ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999888653 22222 22220  2343221   233333233333333321  47


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999974

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.90  E-value=0.016  Score=51.48  Aligned_cols=100  Identities=20%  Similarity=0.259  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +...++++++||..|+ | .|..++.+++..+.  +|+++..+++-.+.+++   ..|.+.+.....  |..+.+..  .
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhcccc--c
Confidence            4567889999999995 4 69999999998864  79999999886665553   355543322221  32222211  1


Q ss_pred             CCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          220 QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +.+|+|+.+.+.. .....++.|+++|+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            3699999988854 455778999999998763

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.89  E-value=0.0076  Score=51.84  Aligned_cols=80  Identities=14%  Similarity=0.188  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      .+.+++|+||+|++|.++++.+...|++|+++.++. +..+.++ ..+... ..|-.+.+++.+.+.++..  +++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            467899999999999999998888999998876543 3334444 333321 2344443234444443322  4799999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      .+.|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            98863

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.88  E-value=0.0085  Score=51.76  Aligned_cols=80  Identities=21%  Similarity=0.273  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC-e--eeeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN--KFGFD-D--AFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.+++|+|++|++|..+++.+...|++|+++.++.+..+...+  ..+.. .  ..|..+..++...+.++..  +.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999999999888889999999988653333321  22322 1  2233332133333333221  3799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        85 ~vi~~ag   91 (263)
T PRK08226         85 ILVNNAG   91 (263)
T ss_pred             EEEECCC
Confidence            9999887

>PRK07791 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.0078  Score=52.85  Aligned_cols=82  Identities=18%  Similarity=0.208  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHHHh---CCC-ee--eeCCChhhHHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK---------EKVDLLKNKF---GFD-DA--FNYKEEPDLDAAL  214 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~---------~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v  214 (339)
                      -.+.++||+||++++|.++++.+...|++|+++.++.         ++.+.+.+++   +.. ..  .|-.+.++..+.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3578999999999999999988888999999987654         3333332233   322 11  2333332334444


Q ss_pred             HHhCC--CCccEEEECCCh
Q 037444          215 KRCFP--QGIDIYFENVGG  231 (339)
Q Consensus       215 ~~~~~--g~~d~vid~~g~  231 (339)
                      .++..  |.+|++|++.|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            43322  479999998873

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.86  E-value=0.018  Score=49.44  Aligned_cols=105  Identities=20%  Similarity=0.220  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh---CCC-ee--eeCCChhhHH---HHHHHh---
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNKF---GFD-DA--FNYKEEPDLD---AALKRC---  217 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~---~~v~~~---  217 (339)
                      .+.+++|+|+++++|.++++.+...|++|++.. ++.++.+.+.+++   +.. ..  .|-.+.++..   +.+.+.   
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            467999999999999999999989999998864 4444443322122   221 11  1222211222   222221   


Q ss_pred             -CC-CCccEEEECCChh-----------hH---------------HHHHHhhccCCEEEEEecccc
Q 037444          218 -FP-QGIDIYFENVGGK-----------ML---------------DAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       218 -~~-g~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  255 (339)
                       .+ +++|+++++.|..           .+               +.++..++..|+++.+++...
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence             12 2799999988721           01               124455566799999887554

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.86  E-value=0.0061  Score=52.55  Aligned_cols=79  Identities=19%  Similarity=0.252  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||++++|.++++.+...|++|++++++ ++.+.+.+   +.+.. .  ..|-.+.+.+...+.+...  +++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999988899999999887 33333321   23322 1  2333333133333333321  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        93 d~li~~ag  100 (258)
T PRK06935         93 DILVNNAG  100 (258)
T ss_pred             CEEEECCC
Confidence            99999887

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.85  E-value=0.0074  Score=51.84  Aligned_cols=100  Identities=16%  Similarity=0.088  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Ceee--eCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAF--NYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~--~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.++..... ..+. ..++  |..+   ..+.+.+....++|+||.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~~~Dl~d---~~~~l~~~~~~~~d~vi~   91 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL-PQDPSLQIVRADVTE---GSDKLVEAIGDDSDAVIC   91 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc-ccCCceEEEEeeCCC---CHHHHHHHhhcCCCEEEE
Confidence            3578999999999999999888888999999998877654332 1111 1222  3322   112233322226999999


Q ss_pred             CCChh--------------hHHHHHHhhccC--CEEEEEeccc
Q 037444          228 NVGGK--------------MLDAVLLNMRLR--GRIAVCGMIS  254 (339)
Q Consensus       228 ~~g~~--------------~~~~~~~~l~~~--G~~v~~g~~~  254 (339)
                      +.|..              .....++.+...  ++++.++...
T Consensus        92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            87631              123344444443  6888877643

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.0063  Score=52.23  Aligned_cols=75  Identities=19%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.+++|+||+|++|..+++.+...|++|++++++.++    . ..+.. .  ..|..+..++.+.+..+..  +.+|++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   79 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999888899999999988654    1 22221 1  2343433233333333321  378999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        80 i~~ag   84 (252)
T PRK07856         80 VNNAG   84 (252)
T ss_pred             EECCC
Confidence            99887

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.83  E-value=0.026  Score=48.21  Aligned_cols=104  Identities=18%  Similarity=0.214  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHH----HHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVD----LLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~----~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +.++||+||+|.+|..+++.+...|++|+.+.++ .++..    .++ ..+.. ..  .|..+..++...+.+...  ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            6799999999999999998888899998877643 22222    222 23332 12  233333123233333221  37


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +|++|.+.|..           .               .+.++..++..|+++.+++....
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  145 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGI  145 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhcc
Confidence            99999999730           0               22344555677899988875543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.83  E-value=0.0076  Score=51.85  Aligned_cols=80  Identities=21%  Similarity=0.295  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|+++++|..++..+...|++|+.++++.++.+.+.++   .+.. .+  .|..+.+++.+.+.....  +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999998888999999999887765444322   2322 12  344443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++.+.|
T Consensus        90 d~li~~ag   97 (255)
T PRK06113         90 DILVNNAG   97 (255)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0081  Score=51.65  Aligned_cols=81  Identities=19%  Similarity=0.161  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.+++|+|+++++|.++++.+...|++|+++.++.+ ..+.+.+   ..+.. ..  .|-.+.+++.+.+.+..  .+.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999998889999999987643 2222221   22321 12  23333323333333332  147


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|.+.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.82  E-value=0.0096  Score=51.50  Aligned_cols=80  Identities=24%  Similarity=0.362  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CC---CeeeeCCChhh-HHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQL-VGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GF---DDAFNYKEEPD-LDAALKRCFPQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~-ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~---~~v~~~~~~~~-~~~~v~~~~~g  220 (339)
                      +.|+|.+|+||+.++|.+ +-++|+ .|.+|+.++|+.++++.+++++    ++   ..++|+.+. + .-+.+++.+.+
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~-~~~ye~i~~~l~~  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKG-DEVYEKLLEKLAG  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCC-chhHHHHHHHhcC
Confidence            357999999999999987 456666 9999999999999987776544    32   135677775 4 25556666666


Q ss_pred             -CccEEEECCCh
Q 037444          221 -GIDIYFENVGG  231 (339)
Q Consensus       221 -~~d~vid~~g~  231 (339)
                       .+-+.++++|-
T Consensus       125 ~~VgILVNNvG~  136 (312)
T KOG1014|consen  125 LDVGILVNNVGM  136 (312)
T ss_pred             CceEEEEecccc
Confidence             88899999983

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.81  E-value=0.0082  Score=51.93  Aligned_cols=80  Identities=6%  Similarity=0.160  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCe--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGFDD--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ++.+++|+||  ++++|.++++.+...|++|+.+.+.+...+.++   ++.+...  ..|-.+.++..+.+.+...  ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5779999996  569999999988889999998866543333332   1223222  2343333244444443322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        85 iD~lVnnAG   93 (261)
T PRK08690         85 LDGLVHSIG   93 (261)
T ss_pred             CcEEEECCc
Confidence            999999986

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.80  E-value=0.012  Score=50.79  Aligned_cols=93  Identities=22%  Similarity=0.286  Sum_probs=70.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECC--
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENV--  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~--  229 (339)
                      .+|.|+|+ |.+|.-+.++|..+|++|+....+.++++.+...++-+ +++ ++...++.+.+.     +.|++|.++  
T Consensus       169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~-~st~~~iee~v~-----~aDlvIgaVLI  241 (371)
T COG0686         169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTL-YSTPSNIEEAVK-----KADLVIGAVLI  241 (371)
T ss_pred             ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEE-EcCHHHHHHHhh-----hccEEEEEEEe
Confidence            45788886 99999999999999999999999999998888555554 333 333225555553     489998865  


Q ss_pred             -Chh----hHHHHHHhhccCCEEEEEec
Q 037444          230 -GGK----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 -g~~----~~~~~~~~l~~~G~~v~~g~  252 (339)
                       |.+    ..++.++.|++++.+|++.-
T Consensus       242 pgakaPkLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             cCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence             222    56788999999999998865

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.79  E-value=0.012  Score=50.90  Aligned_cols=81  Identities=23%  Similarity=0.281  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.+++|+|+++++|..++..+...|++|+++.+++++.+.+.+.+   +.. .  ..|-.+...+.+.+.+...  +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999999999999998888888999999998887655443232   332 1  2233333133333333221  369


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK06398 aldose dehydrogenase; Validated

Probab=96.78  E-value=0.0031  Score=54.45  Aligned_cols=75  Identities=17%  Similarity=0.186  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      .|.++||+|+++++|.++++.+...|++|+++.+++++...+.     ....|-.+..++.+.+.++..  +++|++|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4679999999999999999999999999999998754321110     012243433233333443322  369999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        80 Ag   81 (258)
T PRK06398         80 AG   81 (258)
T ss_pred             CC
Confidence            87

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.78  E-value=0.015  Score=53.91  Aligned_cols=75  Identities=25%  Similarity=0.396  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      ...++.+|+|+|+ |.+|..+++.++..| .+|+++.++.++.+.+.+.+|.. .++.  . ++.+.+.     ++|+||
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~-~l~~~l~-----~aDvVi  245 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF--E-DLEEYLA-----EADIVI  245 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--H-HHHHHHh-----hCCEEE
Confidence            3467899999996 999999999999999 48999999988765444377753 3322  1 3333332     599999


Q ss_pred             ECCChh
Q 037444          227 ENVGGK  232 (339)
Q Consensus       227 d~~g~~  232 (339)
                      +|++..
T Consensus       246 ~aT~s~  251 (417)
T TIGR01035       246 SSTGAP  251 (417)
T ss_pred             ECCCCC
Confidence            999864

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.0087  Score=51.60  Aligned_cols=80  Identities=16%  Similarity=0.259  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+|+  ++++|.++++.+...|++|+++.++.  +..+.+.++++.. .  ..|-.+.+.+.+.+.+...  ++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999  79999999988888999999988653  3334444344431 1  2333333133333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 iD~li~nAG   94 (256)
T PRK07889         86 LDGVVHSIG   94 (256)
T ss_pred             CcEEEEccc
Confidence            999999887

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.77  E-value=0.011  Score=50.59  Aligned_cols=82  Identities=15%  Similarity=0.163  Sum_probs=53.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--eee--eCC--ChhhHHHHHHHhCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DAF--NYK--EEPDLDAALKRCFP  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v~--~~~--~~~~~~~~v~~~~~  219 (339)
                      ..++.+++|+|++|++|..+++.+...|++|+++.++.++.+.+.+++   +..  .++  +.+  +..++.+.+..+..
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            457889999999999999999888888999999999887654443232   321  122  221  11133333332222


Q ss_pred             --CCccEEEECCC
Q 037444          220 --QGIDIYFENVG  230 (339)
Q Consensus       220 --g~~d~vid~~g  230 (339)
                        +.+|++|.+.|
T Consensus        89 ~~~~id~vi~~Ag  101 (247)
T PRK08945         89 QFGRLDGVLHNAG  101 (247)
T ss_pred             HhCCCCEEEECCc
Confidence              36999999876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.77  E-value=0.0096  Score=50.91  Aligned_cols=80  Identities=19%  Similarity=0.278  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+||+|++|..+++.+...|++|+.+.++.++.+.+.+.+   +.. .++  |..+.+.+.+.+..+..  +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999988889999999998887655543222   221 222  33333133333333322  368


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        82 d~vi~~ag   89 (250)
T TIGR03206        82 DVLVNNAG   89 (250)
T ss_pred             CEEEECCC
Confidence            99999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.77  E-value=0.021  Score=45.72  Aligned_cols=97  Identities=18%  Similarity=0.096  Sum_probs=62.8

Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD  209 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  209 (339)
                      ...|+....+...+.+...--.|.+++|.|++..+|..+++.++..|++|+++.++.+                     +
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~   80 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK---------------------N   80 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------h
Confidence            3345555555555544433468899999998444699999999999999888886532                     2


Q ss_pred             HHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          210 LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       210 ~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +.+.+.     .+|+||.+++.+.+ -..+.++++-.+++++.+
T Consensus        81 l~~~l~-----~aDiVIsat~~~~i-i~~~~~~~~~viIDla~p  118 (168)
T cd01080          81 LKEHTK-----QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGIN  118 (168)
T ss_pred             HHHHHh-----hCCEEEEcCCCCce-ecHHHccCCeEEEEccCC
Confidence            222222     38999999997532 222356666666677664

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.018  Score=49.11  Aligned_cols=76  Identities=20%  Similarity=0.230  Sum_probs=51.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Ce--eeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DD--AFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+++|+||+|++|..++..+...|++|+++.+++++.+.+. ..+. ..  ..|-.+.+++.+.+.+.. ...|.++.+.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~d~~i~~a   79 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQLP-FIPELWIFNA   79 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhcc-cCCCEEEEcC
Confidence            46899999999999988888888999999999988777665 3221 11  234444324444444332 2467776665


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      |
T Consensus        80 g   80 (240)
T PRK06101         80 G   80 (240)
T ss_pred             c
Confidence            4

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.75  E-value=0.0092  Score=51.53  Aligned_cols=80  Identities=16%  Similarity=0.277  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH----hCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNK----FGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      ++.++||+||++++|.+++..+...|++|+.+.+ +.++.+.+.++    .+.. ..  +|..+.+++.+.+.++..  +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999988889999988764 34443332212    2321 22  244443234333443322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+++++.|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            7999999875

>PRK04148 hypothetical protein; Provisional

Probab=96.75  E-value=0.016  Score=44.18  Aligned_cols=86  Identities=15%  Similarity=0.156  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCC-ChhhHHHHHHHhCCCCccEEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYK-EEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .-.++.++++.|. | .|..++..+...|.+|+++..+++..+.++ +.+...+.+.- ++ ++  .+-    +++|+++
T Consensus        13 ~~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEE
Confidence            3345688999995 6 887666666678999999999999888888 66654332110 00 10  111    2577777


Q ss_pred             ECCChhhHHHHHHhhcc
Q 037444          227 ENVGGKMLDAVLLNMRL  243 (339)
Q Consensus       227 d~~g~~~~~~~~~~l~~  243 (339)
                      .+-....+...+.-|++
T Consensus        83 sirpp~el~~~~~~la~   99 (134)
T PRK04148         83 SIRPPRDLQPFILELAK   99 (134)
T ss_pred             EeCCCHHHHHHHHHHHH
Confidence            77766555554444444

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.75  E-value=0.016  Score=53.53  Aligned_cols=74  Identities=18%  Similarity=0.195  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      -.+.+++|.|+ |++|.+++..+...|+ +++++.++.++.+.+.++++...++.++   ++.+.+     ..+|+||.|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l-----~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLI-----KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHh-----ccCCEEEEC
Confidence            45789999996 9999999999988997 7999999988877776566522233221   222222     259999999


Q ss_pred             CChh
Q 037444          229 VGGK  232 (339)
Q Consensus       229 ~g~~  232 (339)
                      ++.+
T Consensus       250 T~a~  253 (414)
T PRK13940        250 VNVL  253 (414)
T ss_pred             cCCC
Confidence            9976

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.75  E-value=0.012  Score=54.10  Aligned_cols=75  Identities=31%  Similarity=0.373  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-Ceee--eCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAF--NYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~--~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .|.+++|+||+|++|.++++.+...|++|+++++++++.+...+..+. ...+  |..+.    +.+.+.. +++|++|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence            478999999999999999988888999999999887655332212111 1122  33332    2233332 36999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus       252 nAG  254 (406)
T PRK07424        252 NHG  254 (406)
T ss_pred             CCC
Confidence            876

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.73  E-value=0.0072  Score=50.21  Aligned_cols=108  Identities=19%  Similarity=0.231  Sum_probs=68.3

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCe--eeeC
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKN---KFGFDD--AFNY  204 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~---~~g~~~--v~~~  204 (339)
                      +..+...|.  +.+...+++|++||-+|  ++.|+.++-+++..|.  +|+.+...++=.+.+++   .++...  ++..
T Consensus        55 is~P~~~a~--~l~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g  130 (209)
T PF01135_consen   55 ISAPSMVAR--MLEALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG  130 (209)
T ss_dssp             E--HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES
T ss_pred             chHHHHHHH--HHHHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc
Confidence            344444444  33667899999999999  6788999999988875  69999988764444443   455543  2322


Q ss_pred             CChhhHHHHHHHhCC-CCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          205 KEEPDLDAALKRCFP-QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~-g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +..       ..+.. +.||.++-+.+-. .-...++.|+++|++|..
T Consensus       131 dg~-------~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  131 DGS-------EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             -GG-------GTTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             chh-------hccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            211       11111 3799999988865 446788999999999874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.011  Score=51.38  Aligned_cols=78  Identities=19%  Similarity=0.189  Sum_probs=51.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eee--eCCChhhHHHHHHHhC--CCCccEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAF--NYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      +++|+||+|++|..+++.+...|++|+++.++.++.+.+.+.+   +.. ..+  |..+..++.+.+..+.  .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6999999999999999888888999999999887755443222   322 122  3323212233232221  1379999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999873

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.72  E-value=0.027  Score=47.04  Aligned_cols=98  Identities=16%  Similarity=0.172  Sum_probs=67.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~  217 (339)
                      +...++++++||-.|  .+.|..+..+++..+  .+|+++..+++-.+.+++.   .|..  .++..+.. .   ..  .
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~-~---~~--~  141 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT-L---GY--E  141 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc-c---CC--C
Confidence            556789999999998  577888888888875  5999999998877766643   3432  22322211 1   00  0


Q ss_pred             CCCCccEEEECCCh-hhHHHHHHhhccCCEEEEE
Q 037444          218 FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       218 ~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  250 (339)
                      ..+.||+|+-.... ......++.|+++|+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            12379999865543 4556788999999998764

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.036  Score=48.35  Aligned_cols=100  Identities=20%  Similarity=0.199  Sum_probs=62.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC-CCCccEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF-PQGIDIY  225 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~-~g~~d~v  225 (339)
                      .+++|+|+ |++|.++++.+. .|++|++++++.++.+.+.+++   |.. ..  .|-.+.+.+.+.+.+.. .+++|++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            57899997 799999988875 7999999999877655443233   321 12  34444323444343331 1479999


Q ss_pred             EECCChh----h---------------HHHHHHhhccCCEEEEEeccc
Q 037444          226 FENVGGK----M---------------LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       226 id~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      |++.|..    .               ++.++..++.+|+++.+++..
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            9999831    1               223344555667777766543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.69  E-value=0.01  Score=51.04  Aligned_cols=79  Identities=16%  Similarity=0.168  Sum_probs=52.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCC--Ceee--eCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK----FGF--DDAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~----~g~--~~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +.++||+|++|++|..+++.+...|++|+.+.++.++.+.+.++    .+.  .+.+  |..+.+++...+.++..  ++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999988888899999999887655443322    221  1222  33332133333333321  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        82 id~vv~~ag   90 (259)
T PRK12384         82 VDLLVYNAG   90 (259)
T ss_pred             CCEEEECCC
Confidence            999999887

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.013  Score=51.95  Aligned_cols=80  Identities=20%  Similarity=0.216  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHH---HhCCC-ee--eeCCChhhHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----------EKVDLLKN---KFGFD-DA--FNYKEEPDLDAAL  214 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----------~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v  214 (339)
                      .|.+++|+||++++|.++++.+...|++|++++++.          ++.+.+.+   ..|.. ..  .|-.+.++....+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            478999999999999999999888999999998763          23322221   33322 11  2333332333333


Q ss_pred             HHhCC--CCccEEEECC-C
Q 037444          215 KRCFP--QGIDIYFENV-G  230 (339)
Q Consensus       215 ~~~~~--g~~d~vid~~-g  230 (339)
                      .++..  |++|++|++. |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence            33322  4799999988 5

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.68  E-value=0.013  Score=50.69  Aligned_cols=80  Identities=15%  Similarity=0.256  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.+++|+||++  ++|.++++.+...|++|+.+.+++.   ..+.+.++.+....  .|-.+.+++...+.+...  |.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478999999975  8999998888889999998887632   22333212222222  344443244444444332  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            999999987

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.67  E-value=0.0092  Score=47.53  Aligned_cols=78  Identities=19%  Similarity=0.267  Sum_probs=49.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC--HHHHHHHHHH---hCCC-eee--eCCChhhHHHHHHHhC--CCCc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS--KEKVDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~--~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      +++|+||++++|..+++.+...|+ +|+.+.++  .++.+.+.++   .+.. .++  |..+.+++...+.+..  .+.+
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999998877777777 78888887  4444444223   3431 222  3333324444444443  2379


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (167)
T PF00106_consen   82 DILINNAGI   90 (167)
T ss_dssp             SEEEEECSC
T ss_pred             ccccccccc
Confidence            999998873

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07577 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.008  Score=50.86  Aligned_cols=74  Identities=24%  Similarity=0.214  Sum_probs=51.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCC-CccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQ-GIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~  229 (339)
                      +.+++|+|++|++|..+++.+...|++|+++.++.++ .     +... ...|..+...+.+.+.++... ++|++|.+.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            5789999999999999999988899999999987654 1     1111 123444432344444444333 689999988


Q ss_pred             Ch
Q 037444          230 GG  231 (339)
Q Consensus       230 g~  231 (339)
                      |.
T Consensus        77 g~   78 (234)
T PRK07577         77 GI   78 (234)
T ss_pred             CC
Confidence            73

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.66  E-value=0.013  Score=50.34  Aligned_cols=80  Identities=23%  Similarity=0.311  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--KVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~--~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .|.+++|+|++|++|.++++.+...|++|+.+.++..  ..+.++ .++.. ..  .|-.+.+++.+.+.++..  +++|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4679999999999999999998889999998765432  223333 33422 11  233332133333433322  3799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|++.|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99998873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.65  E-value=0.028  Score=50.96  Aligned_cols=93  Identities=17%  Similarity=0.096  Sum_probs=65.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC---C-CeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFG---F-DDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+|||+|+ |.+|+.+++.+...| .+|++.+++.++.+.+. ...   . ...+|-.+.    +.+.++.. ++|+||+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~----~al~~li~-~~d~VIn   74 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADV----DALVALIK-DFDLVIN   74 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccCh----HHHHHHHh-cCCEEEE
Confidence            47999997 999999999988888 69999999999988887 443   2 234444432    22222222 3699999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEec
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |.+.. ...-+-.|++.+=.|++...
T Consensus        75 ~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          75 AAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             eCCchhhHHHHHHHHHhCCCEEEccc
Confidence            99975 44444467777777877654

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.02  Score=49.87  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhC--CCCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      ..+++|+||+|++|..+++.+...|++|++++++.++.+.+.+   ..+.. ..  .|..+.+.+.+.+.+..  -+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4589999999999999998888889999999988766543331   22332 11  23333313333333321  14689


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.63  E-value=0.012  Score=50.44  Aligned_cols=80  Identities=15%  Similarity=0.221  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ++.+++|+||+|++|..++..+...|++|++. .++.++.+.+.+   ..+.. ..  .|-.+.+++...+.+...  ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999988899998764 556555433321   23332 12  233333233333333321  36


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        83 id~vi~~ag   91 (250)
T PRK08063         83 LDVFVNNAA   91 (250)
T ss_pred             CCEEEECCC
Confidence            999999887

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.61  E-value=0.012  Score=50.43  Aligned_cols=78  Identities=18%  Similarity=0.198  Sum_probs=52.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCccE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGIDI  224 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d~  224 (339)
                      .++||+|++|.+|..++..+...|++|++++++.++.+.+.+.+   +.. ..  .|..+.+++...+.++.  .+++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999888888999999999887765554222   221 11  24443323333333322  136899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|.+.+
T Consensus        82 vi~~a~   87 (255)
T TIGR01963        82 LVNNAG   87 (255)
T ss_pred             EEECCC
Confidence            998886

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.61  E-value=0.017  Score=49.08  Aligned_cols=81  Identities=23%  Similarity=0.336  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHH---hCCC-eee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+|++|.+|..+++.+...|++|+++.++..+ .+...+.   .+.. ..+  |..+...+.+.+.++..  ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999998889999887766542 2222212   2322 122  33333233333333322  36


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|.+|.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK09135 pteridine reductase; Provisional

Probab=96.61  E-value=0.016  Score=49.47  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh---CC--Ce--eeeCCChhhHHHHHHHhC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKNKF---GF--DD--AFNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~~~---g~--~~--v~~~~~~~~~~~~v~~~~--~g  220 (339)
                      .+.++||+|++|.+|..+++.+...|++|++++++. ++.+.+.+.+   +.  ..  ..|..+.+.+...+.+..  -+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999988888899999999753 3333322121   11  11  224333312333333221  13


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|.+.|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999987

>PRK07069 short chain dehydrogenase; Validated

Probab=96.61  E-value=0.012  Score=50.23  Aligned_cols=77  Identities=16%  Similarity=0.270  Sum_probs=50.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CCe----eeeCCChhhHHHHHHHhCC--CCc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKNKFG----FDD----AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~~~g----~~~----v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +++|+|++|++|..+++.+...|++|+++.++ .++.+.+.+++.    ...    ..|..+.+.+.+.+.+...  +++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            38999999999999998888889999999987 554444432332    111    1244343234443433322  469


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        81 d~vi~~ag   88 (251)
T PRK07069         81 SVLVNNAG   88 (251)
T ss_pred             cEEEECCC
Confidence            99999987

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.60  E-value=0.014  Score=49.60  Aligned_cols=78  Identities=22%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      .++||+|++|++|..+++.+...|++|+++.+ +.++.+...+++   +.. ..  .|..+...+...+.++.  .+.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            36899999999999999998889999999887 444333322122   211 12  23333313333333332  24699


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        81 ~vi~~ag   87 (242)
T TIGR01829        81 VLVNNAG   87 (242)
T ss_pred             EEEECCC
Confidence            9999987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12743 oxidoreductase; Provisional

Probab=96.60  E-value=0.014  Score=50.16  Aligned_cols=79  Identities=16%  Similarity=0.263  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +.++||+||+|++|..+++.+...|++|+++.+ +.++.+.+.+   ..+.. +.  .|..+...+...+.++..  +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999889999988764 3343333321   23432 22  233332133333333322  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|.+.|
T Consensus        82 d~li~~ag   89 (256)
T PRK12743         82 DVLVNNAG   89 (256)
T ss_pred             CEEEECCC
Confidence            99999887

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.60  E-value=0.038  Score=43.53  Aligned_cols=100  Identities=21%  Similarity=0.238  Sum_probs=62.7

Q ss_pred             HHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.++.+..+ +-.|.+++|.|= |.+|.-.++.++.+|++|+++...+-+.-.+. .-|.. +.      .+.+.+   
T Consensus         9 ~~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~---   76 (162)
T PF00670_consen    9 LVDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEAL---   76 (162)
T ss_dssp             HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHT---
T ss_pred             HHHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHH---
Confidence            3444444433 458899999995 99999999999999999999999887654444 34442 22      222222   


Q ss_pred             CCCCccEEEECCChhh--HHHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVGGKM--LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~  252 (339)
                        ...|++|.++|...  -.+-++.|+++-.+..+|.
T Consensus        77 --~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh  111 (162)
T PF00670_consen   77 --RDADIFVTATGNKDVITGEHFRQMKDGAILANAGH  111 (162)
T ss_dssp             --TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSS
T ss_pred             --hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCc
Confidence              25899999999753  3577888888888777765

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.60  E-value=0.012  Score=50.70  Aligned_cols=107  Identities=20%  Similarity=0.190  Sum_probs=75.9

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhH
Q 037444          137 VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDL  210 (339)
Q Consensus       137 ~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~  210 (339)
                      ..++..+.+..++++|++||=+|  .|-|.+++.+|+..|++|++++-|+++.+.+++   +.|..   ++.-.    |+
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~----d~  131 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ----DY  131 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec----cc
Confidence            45556666788999999999998  678899999999999999999999998887774   23443   12111    11


Q ss_pred             HHHHHHhCCCCccEEE-----ECCCh----hhHHHHHHhhccCCEEEEEeccc
Q 037444          211 DAALKRCFPQGIDIYF-----ENVGG----KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                          +.+. +.||-|+     +.+|.    ..+..+.++|.++|+++......
T Consensus       132 ----rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         132 ----RDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             ----cccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence                1111 2366664     34453    25778999999999998765543

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.014  Score=50.88  Aligned_cols=81  Identities=22%  Similarity=0.323  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-------HHHHHH---HhCCC-ee--eeCCChhhHHHHHHHh
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-------VDLLKN---KFGFD-DA--FNYKEEPDLDAALKRC  217 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-------~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~  217 (339)
                      .+.+++|+||+|++|..+++.+...|++|++++++.+.       .+.+.+   ..+.. .+  .|..+.+.+.+.+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999888899999999986532       111111   23332 12  3444432333333332


Q ss_pred             CC--CCccEEEECCCh
Q 037444          218 FP--QGIDIYFENVGG  231 (339)
Q Consensus       218 ~~--g~~d~vid~~g~  231 (339)
                      ..  +++|++|++.|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence            21  379999998873

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.59  E-value=0.034  Score=47.54  Aligned_cols=75  Identities=19%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+|++|++|..+++.+...|++|+++.++.     .. ..+.. ..  .|-.+.+.+.+.+.+...  +.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467899999999999999998888999999999875     22 22221 11  233333133333333322  369999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999874

>PRK08264 short chain dehydrogenase; Validated

Probab=96.59  E-value=0.011  Score=50.11  Aligned_cols=75  Identities=23%  Similarity=0.287  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+.    .+.. .+  .|..+.+++.+.+...  +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEE
Confidence            467899999999999999999888999 99999988765442    2221 22  2333331233322221  3589999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.56  E-value=0.013  Score=50.59  Aligned_cols=80  Identities=15%  Similarity=0.268  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGS---KEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~---~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+||  ++++|.++++.+...|++|+.+.+.   .++.+.+.++++....  .|-.+.++..+.+.....  |+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999996  5799999998888899999987543   2333333324443222  343433244444444322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        85 iD~lvnnAG   93 (260)
T PRK06997         85 LDGLVHSIG   93 (260)
T ss_pred             CcEEEEccc
Confidence            999999886

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.56  E-value=0.012  Score=58.00  Aligned_cols=80  Identities=20%  Similarity=0.315  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCCe----eeeCCChhhHHHHHHHhC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFDD----AFNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~v~~~~--~g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+.+    +...    ..|-.+...+.+.+.+..  -|
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999888888999999999887665543232    2211    123333323333343332  24


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus       493 ~iDilV~nAG  502 (676)
T TIGR02632       493 GVDIVVNNAG  502 (676)
T ss_pred             CCcEEEECCC
Confidence            7999999988

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.54  E-value=0.034  Score=44.37  Aligned_cols=93  Identities=20%  Similarity=0.255  Sum_probs=61.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|.|+||+|.+|...++=|+.+|-+|++++|++++....+ ..-+  ..+++      ... +.... .|+|+||++.|.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd------~~~-~a~~l-~g~DaVIsA~~~   72 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFD------LTS-LASDL-AGHDAVISAFGA   72 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccC------hhh-hHhhh-cCCceEEEeccC
Confidence            6899999999999999999999999999999998865433 2211  11222      111 11111 279999998874


Q ss_pred             h----------hHHHHHHhhccC--CEEEEEecccc
Q 037444          232 K----------MLDAVLLNMRLR--GRIAVCGMISQ  255 (339)
Q Consensus       232 ~----------~~~~~~~~l~~~--G~~v~~g~~~~  255 (339)
                      .          ..+..+..|+.-  -|++.+|..+.
T Consensus        73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence            3          122355566653  48888876443

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.0075  Score=52.00  Aligned_cols=76  Identities=22%  Similarity=0.271  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      +|.++||+|++|++|..+++.+...|++|++++++.++.  ..  -... ...|-.+.+.+...+.++..  +++|++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   83 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH   83 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999999999999999998888899999999875431  11  0111 12233333123222222221  37999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        84 ~ag   86 (260)
T PRK06523         84 VLG   86 (260)
T ss_pred             CCc
Confidence            887

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.52  E-value=0.029  Score=49.02  Aligned_cols=95  Identities=17%  Similarity=0.118  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      ..+.+++|+|+ |++|.+++..+...| .+|+++.++.++.+.+.+.++....+.. .. +..+.+     ..+|+||+|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence            45678999996 999999999999999 5999999999887777645542110111 00 111111     368999999


Q ss_pred             CChhhH------HHHHHhhccCCEEEEEec
Q 037444          229 VGGKML------DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       229 ~g~~~~------~~~~~~l~~~G~~v~~g~  252 (339)
                      +.....      ......+.++..++++-.
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence            874321      123456777777777644

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.021  Score=48.68  Aligned_cols=77  Identities=17%  Similarity=0.178  Sum_probs=50.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--eee--eCCChhhHHHHHHHhCCCCccEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DAF--NYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v~--~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      .+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+.+   +..  +++  |-.+..++.+.+.+.. ..+|++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v   80 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV   80 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence            47999999999999999888888999999999887665443222   111  222  3333213333333321 257999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +.+.|
T Consensus        81 v~~ag   85 (243)
T PRK07102         81 LIAVG   85 (243)
T ss_pred             EECCc
Confidence            98776

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=96.50  E-value=0.022  Score=45.81  Aligned_cols=79  Identities=16%  Similarity=0.240  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--Ce-ee--eCCChhhHHHHHHHhCC--CCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--DD-AF--NYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~~-v~--~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      ....+|+|+++++|.+..|.+...|++|.+.....+..+.....++.  ++ .|  |-+++.+....+++..+  |.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            34578999999999999999999999999998777665554436665  22 23  33333233333444433  47999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +++|.|
T Consensus        94 lVncAG   99 (256)
T KOG1200|consen   94 LVNCAG   99 (256)
T ss_pred             EEEcCc
Confidence            999998

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.029  Score=47.05  Aligned_cols=76  Identities=16%  Similarity=0.203  Sum_probs=49.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~~g  230 (339)
                      .++||+||+|.+|..++..+... .+|+++.++.++.+.+.+.+...+++..+-. + .+.+.+...  +++|++|.+.|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-~-~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLT-D-PEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCC-C-HHHHHHHHHhcCCCCEEEECCC
Confidence            57999999999999988776666 8999999998776655523322223322221 2 223333332  26999999987


Q ss_pred             h
Q 037444          231 G  231 (339)
Q Consensus       231 ~  231 (339)
                      .
T Consensus        81 ~   81 (227)
T PRK08219         81 V   81 (227)
T ss_pred             c
Confidence            3

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.49  E-value=0.016  Score=49.28  Aligned_cols=80  Identities=26%  Similarity=0.352  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +.++||+|++|++|..++..+...|++|+++ .++.++.+.+.+.+   +.. .+  .|..+.+.+...+.....  +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999998877889999998 87776654443222   221 12  233333123232322211  369


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998873

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=96.49  E-value=0.013  Score=52.98  Aligned_cols=76  Identities=17%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-eee--eCCChhhHHHHHHHhCCC-CccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D-DAF--NYKEEPDLDAALKRCFPQ-GIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~-~v~--~~~~~~~~~~~v~~~~~g-~~d~  224 (339)
                      +|.+|||+||+|.+|..+++.+...|.+|+++.++........+.++.  . ..+  |-.+.    +.+.+...+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA----AKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH----HHHHHHHhhcCCCE
Confidence            468999999999999999999988999999998766543222112221  1 112  22222    233333334 6899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ||++.+
T Consensus        79 vih~A~   84 (349)
T TIGR02622        79 VFHLAA   84 (349)
T ss_pred             EEECCc
Confidence            999987

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.49  E-value=0.015  Score=50.27  Aligned_cols=105  Identities=13%  Similarity=0.090  Sum_probs=64.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC-
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK------EKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP-  219 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~------~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~-  219 (339)
                      .|.+++|+||+  +++|.++++.+...|++|+.+.++.      +..+.+.++.+....  .|-.+.+...+.+.+... 
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            46889999985  7999999988888999998875432      223333312221112  344443233333333322 


Q ss_pred             -CCccEEEECCChh-------h-----------------------HHHHHHhhccCCEEEEEecccc
Q 037444          220 -QGIDIYFENVGGK-------M-----------------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       220 -g~~d~vid~~g~~-------~-----------------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                       |++|+++++.|..       .                       .+..+..++.+|+++.+++...
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~  151 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG  151 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence             4799999998721       1                       1234556667799988876543

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.48  E-value=0.06  Score=44.82  Aligned_cols=102  Identities=17%  Similarity=0.169  Sum_probs=71.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCeee-eCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFGFDDAF-NYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g~~~v~-~~~~~~~~~~~v~~~~  218 (339)
                      ...++....+||=.|  +.+|+.++.+|..+.  .+++.+..++++.+.+++   +.|.+..+ -.... +..+.+....
T Consensus        53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhcc
Confidence            345566778888887  789999999999875  489999999998877764   34654321 11112 4555555534


Q ss_pred             CCCccEEEECCC-h---hhHHHHHHhhccCCEEEE
Q 037444          219 PQGIDIYFENVG-G---KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ~g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~  249 (339)
                      .+.||+||==.. .   ..++.++++|++||.++.
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~  164 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVA  164 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEE
Confidence            458999974443 2   278899999999999874

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.47  E-value=0.031  Score=46.48  Aligned_cols=98  Identities=13%  Similarity=0.147  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhHHHHHHH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDLDAALKR  216 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~v~~  216 (339)
                      +...++++++||=.|  .+.|..+..+++..+  .+|+++..+++-.+.+++   ..+..   .++..+.    .+.+. 
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~----~~~~~-  138 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG----KRGLE-  138 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc----ccCCc-
Confidence            556778999999998  577888888888774  599999999886666653   23432   2232221    11111 


Q ss_pred             hCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEE
Q 037444          217 CFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       217 ~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  250 (339)
                       ..+.+|+|+-+... ...+...+.|+++|+++..
T Consensus       139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 -KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             -cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence             12379999977664 3446778999999998764

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.47  E-value=0.04  Score=44.97  Aligned_cols=97  Identities=13%  Similarity=0.140  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .++++.+||-.|  .+.|..++.+++.. +++|+++..+++..+.+++   +.+.+. +..... +..+ +..  .+.+|
T Consensus        42 ~l~~g~~VLDiG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEc--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence            355688999888  45667777777654 6799999999876665553   344433 222221 2222 111  23799


Q ss_pred             EEEECCCh---hhHHHHHHhhccCCEEEEEe
Q 037444          224 IYFENVGG---KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       224 ~vid~~g~---~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+.....   ..+..+.+.|+++|+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            99975432   36778899999999998773

>PRK05599 hypothetical protein; Provisional

Probab=96.47  E-value=0.017  Score=49.38  Aligned_cols=77  Identities=13%  Similarity=0.125  Sum_probs=50.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--eee--eCCChhhHHHHHHHhC--CCCccE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DAF--NYKEEPDLDAALKRCF--PQGIDI  224 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v~--~~~~~~~~~~~v~~~~--~g~~d~  224 (339)
                      +++|+||++++|.++++... .|++|+.+.++.++.+.+.+++   |..  .++  |-.+.+.+.+.+.++.  .|++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999877665 4999999999888776554333   322  222  3333213333333322  247999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      ++.+.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9998873

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.46  E-value=0.022  Score=48.69  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHh---CCCCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRC---FPQGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~---~~g~~d~  224 (339)
                      +.+++|+||+|++|..++..+...|++|+.+.+ +.++.+.+.++++.. .+  .|..+..++.+.+.+.   .++++|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            568999999999999999988888999988754 445444444344422 12  2333321333333332   2224999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|.+.|
T Consensus        85 li~~ag   90 (253)
T PRK08642         85 VVNNAL   90 (253)
T ss_pred             EEECCC
Confidence            999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.029  Score=48.27  Aligned_cols=80  Identities=16%  Similarity=0.199  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.+. .++.+.+.+++   +.. +.  .|..+...+.+.+.+..  .++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999998888899999887654 33333332122   332 12  23333313333333321  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|.+.|
T Consensus        88 iD~vi~~ag   96 (258)
T PRK09134         88 ITLLVNNAS   96 (258)
T ss_pred             CCEEEECCc
Confidence            999999987

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.46  E-value=0.023  Score=49.06  Aligned_cols=81  Identities=19%  Similarity=0.186  Sum_probs=51.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ++.+++|+||+|++|..+++.+...|++|+++.++. +..+.+.+   ..+.. .  ..|-.+...+.+.+..+..  ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998887743 22222221   22322 1  2243433133333333322  37


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|+++.+.|.
T Consensus        86 id~lv~~ag~   95 (261)
T PRK08936         86 LDVMINNAGI   95 (261)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.021  Score=48.93  Aligned_cols=81  Identities=19%  Similarity=0.187  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC-----
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF-----  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~-----  218 (339)
                      .+.+++|+|++|++|..+++.+...|++|++. .++.++.+.+.+.+   +.. ++  .|-.+.+++.+.+++..     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            35789999999999999999888889998775 56665544333232   221 12  24443323443333331     


Q ss_pred             --C-CCccEEEECCCh
Q 037444          219 --P-QGIDIYFENVGG  231 (339)
Q Consensus       219 --~-g~~d~vid~~g~  231 (339)
                        + +++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence              1 369999998873

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.46  E-value=0.012  Score=51.62  Aligned_cols=149  Identities=19%  Similarity=0.201  Sum_probs=82.5

Q ss_pred             CCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHH
Q 037444           88 IQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQL  167 (339)
Q Consensus        88 v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~  167 (339)
                      -+.+++|++.+....|.++-.-+.+. ++.+ ..+  +.|....=+++-+ ...+|.+.  ..+|++||=.|  .|.|.+
T Consensus       105 ~~P~~vg~~~~I~P~w~~~~~~~~~~-~I~i-dPg--~AFGTG~H~TT~l-cl~~l~~~--~~~g~~vLDvG--~GSGIL  175 (295)
T PF06325_consen  105 FKPIRVGDRLVIVPSWEEYPEPPDEI-VIEI-DPG--MAFGTGHHPTTRL-CLELLEKY--VKPGKRVLDVG--CGSGIL  175 (295)
T ss_dssp             ---EEECTTEEEEETT----SSTTSE-EEEE-STT--SSS-SSHCHHHHH-HHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred             CccEEECCcEEEECCCcccCCCCCcE-EEEE-CCC--CcccCCCCHHHHH-HHHHHHHh--ccCCCEEEEeC--CcHHHH
Confidence            44577899888888888883223344 6777 445  5542222222211 12223232  67889999888  456666


Q ss_pred             HHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECCChhh----HHHHH
Q 037444          168 VGQFAKLAGC-YVVGSAGSKEKVDLLKN---KFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM----LDAVL  238 (339)
Q Consensus       168 ai~la~~~ga-~V~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~----~~~~~  238 (339)
                      ++-.++ +|| +|+++...+...+.+++   .-|.. .+...... +.       ..+.+|+|+-.+-.+.    .....
T Consensus       176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~  246 (295)
T PF06325_consen  176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIA  246 (295)
T ss_dssp             HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCH
T ss_pred             HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHH
Confidence            665555 588 89999988876655553   12322 22111111 11       1257999998887653    34455


Q ss_pred             HhhccCCEEEEEeccc
Q 037444          239 LNMRLRGRIAVCGMIS  254 (339)
Q Consensus       239 ~~l~~~G~~v~~g~~~  254 (339)
                      ++|+++|.++..|-..
T Consensus       247 ~~l~~~G~lIlSGIl~  262 (295)
T PF06325_consen  247 SLLKPGGYLILSGILE  262 (295)
T ss_dssp             HHEEEEEEEEEEEEEG
T ss_pred             HhhCCCCEEEEccccH
Confidence            7888999999988744

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PLN00015 protochlorophyllide reductase

Probab=96.46  E-value=0.02  Score=50.90  Aligned_cols=75  Identities=15%  Similarity=0.163  Sum_probs=51.3

Q ss_pred             EEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC--Ce----eeeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          156 YVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGF--DD----AFNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~--~~----v~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      +|+||++++|.++++.+...| ++|++++++.++.+.+.++++.  ..    .+|-.+.+.+.+.+.++..  +++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999988888889 8999999988776655435532  11    2344443233333433322  3799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        81 nnAG   84 (308)
T PLN00015         81 CNAA   84 (308)
T ss_pred             ECCC
Confidence            9887

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.46  E-value=0.045  Score=47.60  Aligned_cols=104  Identities=16%  Similarity=0.170  Sum_probs=65.8

Q ss_pred             hHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHH
Q 037444          138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAAL  214 (339)
Q Consensus       138 tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v  214 (339)
                      -...+|.+......+.+++|.|+ |++|.+++..+...|++|+++.++.++.+.+.+.++.   ...+.      +.+  
T Consensus       103 G~~~~l~~~~~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~------~~~--  173 (270)
T TIGR00507       103 GLVSDLERLIPLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS------MDE--  173 (270)
T ss_pred             HHHHHHHhcCCCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec------hhh--
Confidence            33344433233455789999997 8999999888888899999999988876655534432   11111      111  


Q ss_pred             HHhCCCCccEEEECCChhh---HH---HHHHhhccCCEEEEEec
Q 037444          215 KRCFPQGIDIYFENVGGKM---LD---AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~~~---~~---~~~~~l~~~G~~v~~g~  252 (339)
                        .....+|+||+|++...   ..   .....++++..++++..
T Consensus       174 --~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y  215 (270)
T TIGR00507       174 --LPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY  215 (270)
T ss_pred             --hcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence              11136899999998531   11   12355677777777754

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.45  E-value=0.046  Score=44.72  Aligned_cols=97  Identities=16%  Similarity=0.131  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCC-Cc
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA-G-CYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQ-GI  222 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~-g-a~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g-~~  222 (339)
                      ..+++|++||..|+ |+ |..+..+++.. + .+|+++..++..    . ..+...+ .|..+. +..+.+++..++ ++
T Consensus        28 ~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCCc
Confidence            45689999999995 44 34455555544 3 489999988653    1 2233211 233333 444556555555 89


Q ss_pred             cEEEE-C----CC-------------hhhHHHHHHhhccCCEEEEEe
Q 037444          223 DIYFE-N----VG-------------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       223 d~vid-~----~g-------------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      |+|+. .    .|             ...+..+.++|+++|+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            99995 2    12             135677899999999998754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.44  E-value=0.021  Score=50.56  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Ce----eeeCCChhhHHHHHHHhC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF----DD----AFNYKEEPDLDAALKRCF--P  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~v~~~~--~  219 (339)
                      -.|.+++|+|+++++|..++.-+...|++|+.++++.++.+.+++++..    ..    .+|-.+...+.....++.  .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999998777666655542    11    123332212222222222  2


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +..|+.|+..|
T Consensus       113 ~~ldvLInNAG  123 (314)
T KOG1208|consen  113 GPLDVLINNAG  123 (314)
T ss_pred             CCccEEEeCcc
Confidence            37899998776

>TIGR02415 23BDH acetoin reductases

Probab=96.41  E-value=0.02  Score=49.02  Aligned_cols=78  Identities=15%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +++|+|++|++|..+++.+...|++|+.+.++.++.+.+.+++   +.. ..  .|-.+.+.+.+.+.....  +.+|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999888889999999998876654433222   321 12  233333133333333321  368999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus        82 i~~ag~   87 (254)
T TIGR02415        82 VNNAGV   87 (254)
T ss_pred             EECCCc
Confidence            998873

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.40  E-value=0.045  Score=47.54  Aligned_cols=96  Identities=18%  Similarity=0.124  Sum_probs=66.2

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++....+..|....---.|.+++|.|.+.-+|.-+.+++...||+|++.-+...                     ++
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            345554445555533222247899999999777999999999999999998775322                     22


Q ss_pred             HHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEeccc
Q 037444          211 DAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.++     .+|+||.++|.+ .+..  ++++++-.++++|...
T Consensus       196 ~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        196 ASYLK-----DADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HHHHh-----hCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            22232     389999999976 3333  4688888888888743

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.40  E-value=0.058  Score=45.59  Aligned_cols=103  Identities=20%  Similarity=0.225  Sum_probs=71.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      ...+..+|++||=.+  +|+|-.+..+++..|- +|++++.|++=++.++++..-   .. +.+-.. |. +.+- +.+.
T Consensus        45 ~~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-dA-e~LP-f~D~  118 (238)
T COG2226          45 SLLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-DA-ENLP-FPDN  118 (238)
T ss_pred             HhhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-ch-hhCC-CCCC
Confidence            334556899998876  7899999999998875 999999999877777744332   11 111111 11 1111 2334


Q ss_pred             CccEEEECCChh-------hHHHHHHhhccCCEEEEEecc
Q 037444          221 GIDIYFENVGGK-------MLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       221 ~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .||+|.-+.|-.       .+.++.|.|+|+|+++.+...
T Consensus       119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             ccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence            899998877722       788999999999999888764

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.023  Score=56.09  Aligned_cols=79  Identities=24%  Similarity=0.330  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      +.+++|+||+|++|..+++.+...|++|+++.+++++.+.+.+++   +.. .+  .|-.+.+++.+.+.+...  +++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            678999999999999999888888999999999988765554233   321 11  243333233333443322  3699


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus       451 ~li~~Ag  457 (657)
T PRK07201        451 YLVNNAG  457 (657)
T ss_pred             EEEECCC
Confidence            9999987

>PRK05855 short chain dehydrogenase; Validated

Probab=96.38  E-value=0.017  Score=55.90  Aligned_cols=81  Identities=20%  Similarity=0.166  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.   .|.. .+  .|-.+.+...+.+.+..  .+++
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999988888999999999998776554322   2331 12  23344313333333332  1479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus       394 d~lv~~Ag~  402 (582)
T PRK05855        394 DIVVNNAGI  402 (582)
T ss_pred             cEEEECCcc
Confidence            999999874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=96.35  E-value=0.021  Score=52.56  Aligned_cols=105  Identities=19%  Similarity=0.153  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHh-CCCe-eeeCCChhhHHHHHHHhCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD------LLKNKF-GFDD-AFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~v~~~~~  219 (339)
                      +-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+      ...+.. +... ..|..+.+.+.+.++.. .
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~  134 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-G  134 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-C
Confidence            3456789999999999999999988888999999998865421      111011 2221 12444331333333322 1


Q ss_pred             CCccEEEECCChh------h-------HHHHHHhhccC--CEEEEEecc
Q 037444          220 QGIDIYFENVGGK------M-------LDAVLLNMRLR--GRIAVCGMI  253 (339)
Q Consensus       220 g~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~  253 (339)
                      +++|+||+|.+..      .       ....++.++..  +++|.++..
T Consensus       135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            1699999988631      1       12334444433  478877754

>PLN02476 O-methyltransferase

Probab=96.33  E-value=0.075  Score=46.07  Aligned_cols=102  Identities=16%  Similarity=0.136  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC-
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF-  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~-  218 (339)
                      ...+..+..+||=.|  ..+|+.++.+|+.++  .+|+.+..+++..+.+++   +.|..+-+..... +..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence            445667788999998  688999999998773  489999999988777753   3465422222222 3344444331 


Q ss_pred             ---CCCccEEEECCChh----hHHHHHHhhccCCEEEE
Q 037444          219 ---PQGIDIYFENVGGK----MLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ---~g~~d~vid~~g~~----~~~~~~~~l~~~G~~v~  249 (339)
                         .+.||.||--....    .++.++++|+++|.++.
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence               23799987555432    67889999999999764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.33  E-value=0.038  Score=46.80  Aligned_cols=70  Identities=21%  Similarity=0.319  Sum_probs=50.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--KVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~--~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      |+|+||+|.+|..+++.+...+.+|.+.+|+..  ..+.++ ..|+.-+ .|+++    .+.+.+... |+|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~----~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDD----PESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-----HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCC----HHHHHHHHc-CCceEEeecC
Confidence            799999999999999999888889999999864  345566 6777432 23333    233444333 6999999988

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.32  E-value=0.028  Score=49.48  Aligned_cols=82  Identities=16%  Similarity=0.158  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCCe-e--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKN---KFGFDD-A--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~---~~g~~~-v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      -.+.++||+||+|++|..+++.+...|++|+++.++.++ .+.+.+   ..+... +  .|-.+...+.+.+.++..  +
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357799999999999999998888889999999876432 222221   223221 2  233333133333333322  3


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|++|.+.|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.30  E-value=0.0089  Score=51.75  Aligned_cols=76  Identities=14%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .+.+++|+|++|++|.++++.+...|++|+.+.++.++.+    ..... ...|-.+..++.+.+.+...  +.+|++|+
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999999999999999999999999999987765422    11111 12344433233333333321  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        84 ~Ag   86 (266)
T PRK06171         84 NAG   86 (266)
T ss_pred             CCc
Confidence            887

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=96.29  E-value=0.083  Score=47.76  Aligned_cols=95  Identities=18%  Similarity=0.167  Sum_probs=64.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEe--CCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH-------------
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA--GCYVVGSA--GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK-------------  215 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~-------------  215 (339)
                      .+|.|.|++|++|..++...+..  ..+|.+++  ++.+++....+++++..++-.+.  .....++             
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G   79 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG   79 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence            47999999999999999988765  46888886  33444444444788876655443  2222222             


Q ss_pred             -----HhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEE
Q 037444          216 -----RCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       216 -----~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  249 (339)
                           ++... .+|+|+.++++ ..+.-.+.+++.|-++.+
T Consensus        80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL  120 (385)
T PRK05447         80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL  120 (385)
T ss_pred             hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence                 22222 58999999987 477778888887766554

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.28  E-value=0.078  Score=45.02  Aligned_cols=102  Identities=17%  Similarity=0.134  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC-
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF-  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~-  218 (339)
                      ...+..+..+||=.|  .+.|+.++.+++.++  .+|+.+..+++..+.+++   ..|...-+..... +..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence            345667788999888  577888888888763  599999999988777763   3354322222222 4444444432 


Q ss_pred             ---CCCccEEEECCCh----hhHHHHHHhhccCCEEEE
Q 037444          219 ---PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ---~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  249 (339)
                         .+.||+||--...    ..+..++++|++||.++.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence               2379999865432    367788999999998764

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.28  E-value=0.055  Score=46.99  Aligned_cols=99  Identities=13%  Similarity=0.018  Sum_probs=62.9

Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      ...+|.+ .+...+.+++|.|+ |+.+.+++..++..|+ +|+++.|+.++.+.+.+.++..          +...+.  
T Consensus       110 f~~~L~~-~~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~--  175 (272)
T PRK12550        110 IAKLLAS-YQVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG--  175 (272)
T ss_pred             HHHHHHh-cCCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc--
Confidence            3444533 34445678999996 9999999998889998 7999999998877776445321          111111  


Q ss_pred             CCCCccEEEECCChhhH--------HHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVGGKML--------DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g~~~~--------~~~~~~l~~~G~~v~~g~  252 (339)
                       ...+|+||+|+.....        .-....+.+...+.++-.
T Consensus       176 -~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY  217 (272)
T PRK12550        176 -GIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVA  217 (272)
T ss_pred             -cccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeec
Confidence             1258999999863211        112344666666665543

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.45  Score=38.47  Aligned_cols=90  Identities=17%  Similarity=0.139  Sum_probs=55.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      +++|+||+ ++|..+++.+...|++|+++.+++++.+.+...++..   ..  .|..+.+++...+.....  +++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            58999997 4555566666678999999999888766655334321   11  355554345555554432  4789999


Q ss_pred             ECCChhhHHHHHHhhccC
Q 037444          227 ENVGGKMLDAVLLNMRLR  244 (339)
Q Consensus       227 d~~g~~~~~~~~~~l~~~  244 (339)
                      +.+-...-.......+..
T Consensus        81 ~~vh~~~~~~~~~~~~~~   98 (177)
T PRK08309         81 AWIHSSAKDALSVVCREL   98 (177)
T ss_pred             EeccccchhhHHHHHHHH
Confidence            988765433444444443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.27  E-value=0.034  Score=47.43  Aligned_cols=81  Identities=23%  Similarity=0.294  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC-eee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.+++|+|++|++|..+++.+...|++|+++.+ ++++.+.+.+.   .+.. .++  |..+...+.+.+.+...  +.
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999888888999987654 34443333212   2321 122  33332133333333322  36


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (247)
T PRK12935         85 VDILVNNAGI   94 (247)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.26  E-value=0.055  Score=42.57  Aligned_cols=94  Identities=21%  Similarity=0.180  Sum_probs=62.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      ..+.+++|.|+ |.+|...++.+...| .+|+++.++.++.+.+.++++... .....   +..+.     -.++|+|+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhc-----cccCCEEEe
Confidence            45789999996 999999998888886 689999998887766553555421 01111   22111     136999999


Q ss_pred             CCChhhH-----HHHHHhhccCCEEEEEec
Q 037444          228 NVGGKML-----DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~-----~~~~~~l~~~G~~v~~g~  252 (339)
                      |++....     ......++++..+++++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~  117 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY  117 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence            9986432     122345667777777754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=96.23  E-value=0.048  Score=47.20  Aligned_cols=106  Identities=11%  Similarity=0.144  Sum_probs=68.6

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      .+....++.++.+||=+|.  +.|..+..+++..+++|+++..+++-.+.+++.......+..... ++.+  ....++.
T Consensus        43 ~~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~--~~~~~~~  117 (263)
T PTZ00098         43 KILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILK--KDFPENT  117 (263)
T ss_pred             HHHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-Cccc--CCCCCCC
Confidence            3335578899999998884  456667778877789999999998888887733332111111111 2111  0112237


Q ss_pred             ccEEEECC-----C--h--hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENV-----G--G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ||+|+..-     +  .  ..+.++.+.|+|+|+++....
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99998621     2  1  267788899999999987654

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.23  E-value=0.089  Score=39.37  Aligned_cols=99  Identities=21%  Similarity=0.284  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHH---HhCCC--eeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKN---KFGFD--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ....+.++++|+-.|.  +.|..+..+++..+ .+|+++..++...+.+++   ..+..  .++..+.. .   .... .
T Consensus        13 ~~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-~---~~~~-~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAP-E---ALED-S   85 (124)
T ss_pred             HHcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccc-c---cChh-h
Confidence            4456677888999884  44999999999874 699999999887776652   23332  22222211 1   0111 1


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+.+|+|+...+.    ..++.+.+.|+++|+++..
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            2379999976542    2678899999999998864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.22  E-value=0.034  Score=47.70  Aligned_cols=79  Identities=14%  Similarity=0.167  Sum_probs=49.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+++|+|++|++|..+++.+...|++|+++.++.. ..+...+.   .+.. .+  .|..+..++.+.+.++..  +.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999888888999999986543 22222112   2221 22  244443233333333322  3699


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99998873

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=96.18  E-value=0.041  Score=48.70  Aligned_cols=38  Identities=11%  Similarity=0.225  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHH
Q 037444          151 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSKEKV  189 (339)
Q Consensus       151 ~g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~~~~~  189 (339)
                      .|.++||+|+  ++++|.++++.+...|++|++ .+...++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5889999999  799999999999999999988 5444433

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.17  E-value=0.039  Score=48.95  Aligned_cols=80  Identities=19%  Similarity=0.219  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCCe-ee--eCCChhhHHHHHHHhC-CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKN---KFGFDD-AF--NYKEEPDLDAALKRCF-PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~---~~g~~~-v~--~~~~~~~~~~~v~~~~-~g~~  222 (339)
                      .|.+++|+|+++++|...++.+...|++|++..++. ++.+.+.+   ..|... .+  |-.+.+...+.+.... -|++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            467999999999999999988888899999987643 23322221   233321 12  3333212222222211 2579


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        91 D~li~nAG   98 (306)
T PRK07792         91 DIVVNNAG   98 (306)
T ss_pred             CEEEECCC
Confidence            99999887

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.17  E-value=0.056  Score=46.99  Aligned_cols=102  Identities=16%  Similarity=0.061  Sum_probs=65.7

Q ss_pred             HHHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCe----eeeCCChhhHH
Q 037444          139 AYAGLYEVC--SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDD----AFNYKEEPDLD  211 (339)
Q Consensus       139 A~~~l~~~~--~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~  211 (339)
                      -+.+|.+..  ...+|.+++|.|+ |+.+.+++.-+...|+ +++++-|+.++.+.+.+.++...    .....+     
T Consensus       111 ~~~~L~~~~~~~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~-----  184 (283)
T COG0169         111 FLRALKEFGLPVDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD-----  184 (283)
T ss_pred             HHHHHHhcCCCcccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc-----
Confidence            344553322  2346899999997 9999999999999997 89999999999877764554321    111111     


Q ss_pred             HHHHHhCCC-CccEEEECCChhh-------HHHHHHhhccCCEEEEEec
Q 037444          212 AALKRCFPQ-GIDIYFENVGGKM-------LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       212 ~~v~~~~~g-~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~  252 (339)
                           .... .+|++|+|+....       .-. ..++++.-.+.++-.
T Consensus       185 -----~~~~~~~dliINaTp~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY  227 (283)
T COG0169         185 -----LEGLEEADLLINATPVGMAGPEGDSPVP-AELLPKGAIVYDVVY  227 (283)
T ss_pred             -----cccccccCEEEECCCCCCCCCCCCCCCc-HHhcCcCCEEEEecc
Confidence                 1111 3899999987321       111 456666666666543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.15  E-value=0.15  Score=44.44  Aligned_cols=106  Identities=16%  Similarity=0.203  Sum_probs=71.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CC---CeeeeCCChhh---HHHHHHHhCCC-Cc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-GF---DDAFNYKEEPD---LDAALKRCFPQ-GI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-g~---~~v~~~~~~~~---~~~~v~~~~~g-~~  222 (339)
                      ++..|+|+|..+++|..++.-+...|.+|++.|-.++..+.++.+. ..   .-.+|-.+++.   ..+.+++..+. +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            4567999999999999999999999999999998777766665332 11   11234333213   34555666665 88


Q ss_pred             cEEEECCC-hh-----------hH---------------HHHHHhhcc-CCEEEEEeccccc
Q 037444          223 DIYFENVG-GK-----------ML---------------DAVLLNMRL-RGRIAVCGMISQY  256 (339)
Q Consensus       223 d~vid~~g-~~-----------~~---------------~~~~~~l~~-~G~~v~~g~~~~~  256 (339)
                      =.++++.| ..           .+               ...+.++++ .||+|.+++..+.
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence            88899887 21           11               123344554 7999999887665

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=96.15  E-value=0.068  Score=46.54  Aligned_cols=76  Identities=18%  Similarity=0.145  Sum_probs=47.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----CCee--e--e-CCChhhHHHHHHHhCCC-Ccc
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFG----FDDA--F--N-YKEEPDLDAALKRCFPQ-GID  223 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g----~~~v--~--~-~~~~~~~~~~v~~~~~g-~~d  223 (339)
                      |||+||+|.+|..+++.+...+. +++++++++.++-.+++++.    ...+  .  . -.+- .-.+.+.++... ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDV-RDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecc-cCHHHHHHHHhhcCCC
Confidence            79999999999999888777776 89999999888776765662    1111  1  0 1111 234566666665 899


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      +||.+..-
T Consensus        80 iVfHaAA~   87 (293)
T PF02719_consen   80 IVFHAAAL   87 (293)
T ss_dssp             EEEE----
T ss_pred             EEEEChhc
Confidence            99998864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK00811 spermidine synthase; Provisional

Probab=96.13  E-value=0.068  Score=46.83  Aligned_cols=94  Identities=9%  Similarity=0.045  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC-----C--C---eeeeCCChhhHHHHHHHhC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFG-----F--D---DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g-----~--~---~v~~~~~~~~~~~~v~~~~  218 (339)
                      ...++||++|+  |.|..+..+++..+. +|.++..+++-.+.+++.+.     .  +   +++..    |..+.+.. .
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~----Da~~~l~~-~  147 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG----DGIKFVAE-T  147 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC----chHHHHhh-C
Confidence            35679999994  557778888887665 89999999888887774332     1  1   12222    33444443 3


Q ss_pred             CCCccEEEECCC-----------hhhHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFENVG-----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+.+|+||--..           .+.++.+.+.|+++|.++.-
T Consensus       148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            458999986432           12356788999999998864

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.13  E-value=0.077  Score=44.39  Aligned_cols=94  Identities=16%  Similarity=0.203  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      -+|-+||=.|..||  . +.+-+.++|++|+++.-+++..+.++ .-....  -++|...  ..+++... ++.||+|++
T Consensus        58 l~g~~vLDvGCGgG--~-Lse~mAr~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGGG--I-LSEPLARLGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCcc--H-hhHHHHHCCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhc-CCCccEEEE
Confidence            47788888886554  4 34444567899999999999888886 211111  1456553  22223221 148999986


Q ss_pred             -----CCCh--hhHHHHHHhhccCCEEEEE
Q 037444          228 -----NVGG--KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       228 -----~~g~--~~~~~~~~~l~~~G~~v~~  250 (339)
                           -+..  ..+..+.++++|+|.++..
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence                 3333  3677899999999997643

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.12  E-value=0.039  Score=44.22  Aligned_cols=97  Identities=23%  Similarity=0.197  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCC-----------------ChhhHHHHH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYK-----------------EEPDLDAAL  214 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~-----------------~~~~~~~~v  214 (339)
                      .-+|+|+|+ |.+|+.|+.+++.+|++|++.....++.+... ..++..+....                 .. .+...+
T Consensus        20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~f   96 (168)
T PF01262_consen   20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPE-SYESNF   96 (168)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCC-HHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHH-HhHHHH
Confidence            368999996 99999999999999999999999988888777 66664332210                 11 222233


Q ss_pred             HHhCCCCccEEEECC--Ch-h----hHHHHHHhhccCCEEEEEec
Q 037444          215 KRCFPQGIDIYFENV--GG-K----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       215 ~~~~~g~~d~vid~~--g~-~----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .+... .+|++|-+.  .+ .    .-++.++.|+++..++++..
T Consensus        97 ~~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~  140 (168)
T PF01262_consen   97 AEFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC  140 (168)
T ss_dssp             HHHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred             HHHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence            32211 378888532  12 1    23567888888888887754

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.11  E-value=0.033  Score=48.22  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=48.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhC----CC-ee--eeCCChhhHH----HHHHHhC--
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKNKFG----FD-DA--FNYKEEPDLD----AALKRCF--  218 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~~~g----~~-~v--~~~~~~~~~~----~~v~~~~--  218 (339)
                      .+++|+||++++|..+++.+...|++|+++.++ .++.+.+.+++.    .. ..  .|-.+.+.+.    +.+....  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            468999999999999999888899999998654 444443332332    11 11  2333321121    1222221  


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      -+++|++|.+.|
T Consensus        82 ~g~iD~lv~nAG   93 (267)
T TIGR02685        82 FGRCDVLVNNAS   93 (267)
T ss_pred             cCCceEEEECCc
Confidence            147999999987

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PLN00016 RNA-binding protein; Provisional

Probab=96.10  E-value=0.051  Score=49.79  Aligned_cols=95  Identities=19%  Similarity=0.209  Sum_probs=61.8

Q ss_pred             CCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-----------HHHHhCCCeeeeCCChhhHHHHHHH
Q 037444          152 GEYVYVS----AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL-----------LKNKFGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       152 g~~vlI~----ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      ..+|||+    ||+|-+|..+++.+...|.+|++++++.+....           +. ..|.. ++..    |+.+ +..
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~-~v~~----D~~d-~~~  124 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVK-TVWG----DPAD-VKS  124 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCce-EEEe----cHHH-HHh
Confidence            3689999    999999999999888889999999988654221           11 22332 2222    2222 333


Q ss_pred             hCCC-CccEEEECCChh--hHHHHHHhhccCC--EEEEEecc
Q 037444          217 CFPQ-GIDIYFENVGGK--MLDAVLLNMRLRG--RIAVCGMI  253 (339)
Q Consensus       217 ~~~g-~~d~vid~~g~~--~~~~~~~~l~~~G--~~v~~g~~  253 (339)
                      .... ++|+||++.+..  .....++.++..|  ++|.++..
T Consensus       125 ~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        125 KVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             hhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            3333 799999998743  3445555555433  78877654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.09  E-value=0.035  Score=48.59  Aligned_cols=95  Identities=11%  Similarity=0.110  Sum_probs=60.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC-CC-ccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP-QG-IDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~-g~-~d~vid~~g  230 (339)
                      +|||+||+|.+|..+++.+...|.+|.++++++++..    ..+... ..|..+.+.+.+.++.... .+ +|.+|.+.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            4899999999999999988888999999999876432    223321 2455554233333332211 25 999998776


Q ss_pred             hh-----hHHHHHHhhccCC--EEEEEec
Q 037444          231 GK-----MLDAVLLNMRLRG--RIAVCGM  252 (339)
Q Consensus       231 ~~-----~~~~~~~~l~~~G--~~v~~g~  252 (339)
                      ..     .....++.++..|  ++|.++.
T Consensus        77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence            31     2334455555444  6777654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.09  E-value=0.097  Score=44.17  Aligned_cols=101  Identities=18%  Similarity=0.246  Sum_probs=73.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ...++.+|++|+=.|  .+.|-++.-||+..|-  +|+.....++..+.+++.   +|....+..... |    +.+...
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-D----v~~~~~  160 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-D----VREGID  160 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-c----cccccc
Confidence            568899999998877  5778888899988875  899999998887776643   444332333222 3    222222


Q ss_pred             C-CccEEEECCCh--hhHHHHHHhhccCCEEEEEec
Q 037444          220 Q-GIDIYFENVGG--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      + .+|.+|-=...  ..++.+.+.|+++|.++.+..
T Consensus       161 ~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P  196 (256)
T COG2519         161 EEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP  196 (256)
T ss_pred             ccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence            3 78988866664  489999999999999998844

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.09  E-value=0.12  Score=45.12  Aligned_cols=150  Identities=19%  Similarity=0.186  Sum_probs=89.2

Q ss_pred             CCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHH--HHHHhcCCCCCCEEEEEcCCchH
Q 037444           87 HIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYA--GLYEVCSPKKGEYVYVSAASGAV  164 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~--~l~~~~~~~~g~~vlI~ga~g~~  164 (339)
                      ....++.|++.+...+|.+|-.-.... .+++ ..+  +.|..   .....|++.  +|.  ..+++|.+||=.|  .+.
T Consensus       105 ~~~P~rig~~f~I~Psw~~~~~~~~~~-~i~l-DPG--lAFGT---G~HpTT~lcL~~Le--~~~~~g~~vlDvG--cGS  173 (300)
T COG2264         105 YFHPVRIGERFVIVPSWREYPEPSDEL-NIEL-DPG--LAFGT---GTHPTTSLCLEALE--KLLKKGKTVLDVG--CGS  173 (300)
T ss_pred             cCCcEEeeeeEEECCCCccCCCCCCce-EEEE-ccc--cccCC---CCChhHHHHHHHHH--HhhcCCCEEEEec--CCh
Confidence            345578899888888888875443234 7777 455  54432   223333332  232  2367999999888  456


Q ss_pred             HHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh----hHHH
Q 037444          165 GQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK----MLDA  236 (339)
Q Consensus       165 G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~----~~~~  236 (339)
                      |..+|-.+ .+|| +|+++...+-..+.+++.   -+... .......+.   ......+.+|+|+..+=.+    ....
T Consensus       174 GILaIAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~~~~~~~---~~~~~~~~~DvIVANILA~vl~~La~~  248 (300)
T COG2264         174 GILAIAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVEL-LVQAKGFLL---LEVPENGPFDVIVANILAEVLVELAPD  248 (300)
T ss_pred             hHHHHHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCch-hhhcccccc---hhhcccCcccEEEehhhHHHHHHHHHH
Confidence            66665544 4577 799999887666555531   12221 000000000   1111124799999877433    4567


Q ss_pred             HHHhhccCCEEEEEec
Q 037444          237 VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~  252 (339)
                      ..++++++|++++.|-
T Consensus       249 ~~~~lkpgg~lIlSGI  264 (300)
T COG2264         249 IKRLLKPGGRLILSGI  264 (300)
T ss_pred             HHHHcCCCceEEEEee
Confidence            7889999999999875

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.08  E-value=0.013  Score=42.70  Aligned_cols=86  Identities=20%  Similarity=0.285  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|||.|+ |.+|..-++.+...||+|++++...   +..+   +.-...   .. .+.+.    . .++++||.+.+
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~---~~-~~~~~----l-~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLI---RR-EFEED----L-DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEE---ES-S-GGG----C-TTESEEEE-SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHH---hh-hHHHH----H-hhheEEEecCC
Confidence            5789999997 9999999999999999999999775   2222   111111   11 22111    1 26999999999


Q ss_pred             hhhHHHHHHhh-ccCCEEEEEec
Q 037444          231 GKMLDAVLLNM-RLRGRIAVCGM  252 (339)
Q Consensus       231 ~~~~~~~~~~l-~~~G~~v~~g~  252 (339)
                      ...++..+... +..|.++.+..
T Consensus        70 d~~~n~~i~~~a~~~~i~vn~~D   92 (103)
T PF13241_consen   70 DPELNEAIYADARARGILVNVVD   92 (103)
T ss_dssp             -HHHHHHHHHHHHHTTSEEEETT
T ss_pred             CHHHHHHHHHHHhhCCEEEEECC
Confidence            87666555544 44898888755

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.03  E-value=0.078  Score=48.72  Aligned_cols=90  Identities=18%  Similarity=0.184  Sum_probs=58.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC-C-EEEEEeCCHHHHHHHHHHh-CCC---eeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAG-C-YVVGSAGSKEKVDLLKNKF-GFD---DAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~g-a-~V~~~~~~~~~~~~~~~~~-g~~---~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      |+|+|+ |.+|..+++.+...+ . +|++..++.++.+.+.+++ +..   ..+|-.+.    +.+.++.. +.|+||+|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP----ESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH----HHHHHHHT-TSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH----HHHHHHHh-cCCEEEEC
Confidence            789999 999999999888765 4 8999999999987776342 221   23343332    22555433 46999999


Q ss_pred             CChh-hHHHHHHhhccCCEEEEE
Q 037444          229 VGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +|.. ...-+-.|+..+-.|++.
T Consensus        75 ~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CccchhHHHHHHHHHhCCCeecc
Confidence            9964 555566777788888884

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.03  E-value=0.035  Score=45.82  Aligned_cols=99  Identities=14%  Similarity=0.067  Sum_probs=62.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +.....++.+||-.|  .+.|..+..+|+. |.+|+++..+++-.+.+++.   .+... +..... ++.+.  . ..+.
T Consensus        24 ~~l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~~~--~-~~~~   95 (197)
T PRK11207         24 EAVKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLNNL--T-FDGE   95 (197)
T ss_pred             HhcccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-ChhhC--C-cCCC
Confidence            334456778899998  4568888888875 88999999998876666522   22221 111111 22111  1 1237


Q ss_pred             ccEEEECCC----h-----hhHHHHHHhhccCCEEEEEe
Q 037444          222 IDIYFENVG----G-----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       222 ~d~vid~~g----~-----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+|+.+..    .     ..+....+.|+++|.++.+.
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            999997543    1     25677888999999965543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.02  E-value=0.11  Score=45.48  Aligned_cols=46  Identities=20%  Similarity=0.145  Sum_probs=38.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF  196 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~  196 (339)
                      ..+.+++|.|+ |+.+.+++..+...|+ +++++.|+.++.+.+.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            34789999996 9999999888888998 8999999988877776454

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.02  E-value=0.046  Score=46.45  Aligned_cols=80  Identities=26%  Similarity=0.333  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +..++||+||+|.+|..+++.+...|++|+++.++..+ .+.+..   ..+.. ++  .|..+.+.+.+.+.+...  ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999998899998887665443 222221   22221 12  233333233333333321  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|.+.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            999999887

>PLN02366 spermidine synthase

Probab=96.02  E-value=0.083  Score=46.73  Aligned_cols=98  Identities=17%  Similarity=0.129  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC------CeeeeCCChhhHHHHHHHhCCCCc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF------DDAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ...++||+.|+  +-|..+..++++-+. +|.++..+++-.+.+++-+..      +.-+..... |..+.+++..++.+
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence            45789999995  346677788887765 888988888767777733321      111111111 44444554334479


Q ss_pred             cEEEECCCh-----------hhHHHHHHhhccCCEEEEE
Q 037444          223 DIYFENVGG-----------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       223 d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  250 (339)
                      |+||--...           +.++.+.++|+++|.++.-
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            999864322           2477889999999998754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.01  E-value=0.043  Score=48.03  Aligned_cols=75  Identities=12%  Similarity=-0.050  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      ++.+++|.|+ |+++.+++..+..+|+ +|+++.|+.++.+.+.+.++.. .+....    ..+.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEEC
Confidence            5789999996 9999999998889998 8999999998877776455431 111111    001111111 368999999


Q ss_pred             CCh
Q 037444          229 VGG  231 (339)
Q Consensus       229 ~g~  231 (339)
                      +..
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            874

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.00  E-value=0.036  Score=52.63  Aligned_cols=74  Identities=15%  Similarity=0.109  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+|.+|+|+|. |..|++++++++..|++|++.+.++++.+.++ +.|+.. +...   ...+.+     ..+|+|+.
T Consensus         8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~---~~~~~l-----~~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTS---DAVQQI-----ADYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCc---chHhHh-----hcCCEEEE
Confidence            3567899999996 99999999999999999999987766666666 667632 3221   111222     14799999


Q ss_pred             CCChh
Q 037444          228 NVGGK  232 (339)
Q Consensus       228 ~~g~~  232 (339)
                      +-|-+
T Consensus        77 SpGi~   81 (488)
T PRK03369         77 SPGFR   81 (488)
T ss_pred             CCCCC
Confidence            88853

>PRK07041 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.036  Score=46.73  Aligned_cols=73  Identities=15%  Similarity=0.194  Sum_probs=49.8

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-Ceee--eCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--GF-DDAF--NYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--g~-~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ||+||+|++|..+++.+...|++|++++++.++.+.+.+.+  +. .+++  |..+..++.+.+.+.  +++|++|++.|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag   78 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA   78 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence            58999999999999888889999999999877665544233  22 1222  433332333333332  46899999887

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.00  E-value=0.075  Score=46.54  Aligned_cols=94  Identities=19%  Similarity=0.027  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CeeeeCCChhhHHHHHHHhCCCCccE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      ..+.+|+|.|+ |++|.+++..+...|+ +|+++.++.++.+.+.+.++.    ..+....   ++.+.+     ..+|+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDi  195 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADG  195 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCE
Confidence            35678999996 9999999999999998 899999998887766545432    1222111   221111     25899


Q ss_pred             EEECCChh-----hHHHHHHhhccCCEEEEEec
Q 037444          225 YFENVGGK-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       225 vid~~g~~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ||+|+...     ...-....++++..++++-.
T Consensus       196 VInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY  228 (284)
T PRK12549        196 LVHATPTGMAKHPGLPLPAELLRPGLWVADIVY  228 (284)
T ss_pred             EEECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence            99996421     11112345666666666544

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.99  E-value=0.25  Score=45.23  Aligned_cols=94  Identities=23%  Similarity=0.312  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      -.+.++||+|+ |-+|..++..+...|. +|++.-|+.++...+.+++|+. ++..+   ++.+.+.     .+|+||-+
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---ELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---HHHHhhh-----hCCEEEEe
Confidence            47889999997 9999999998888896 8888888888877666689853 33222   2233332     49999999


Q ss_pred             CChh----hHHHHHHhhccCCE--EEEEecc
Q 037444          229 VGGK----MLDAVLLNMRLRGR--IAVCGMI  253 (339)
Q Consensus       229 ~g~~----~~~~~~~~l~~~G~--~v~~g~~  253 (339)
                      ++.+    ......+.++..-+  +++++.|
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            9975    23445555555333  4455543

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.98  E-value=0.12  Score=43.35  Aligned_cols=98  Identities=19%  Similarity=0.216  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~  217 (339)
                      +...++++++||=.|  .+.|..++.+++..+.  +|+++..+++-.+.+++   ++|.+.  ++..    +..+...  
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~----d~~~~~~--  142 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG----DGTQGWE--  142 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC----CcccCCc--
Confidence            556789999999998  5778888888887654  79999999887766653   334432  2222    2111110  


Q ss_pred             CCCCccEEEECCCh-hhHHHHHHhhccCCEEEEE
Q 037444          218 FPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       218 ~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  250 (339)
                      ..+.||+|+-.... .......+.|+++|+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            11379988865443 4556788999999998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PLN03075 nicotianamine synthase; Provisional

Probab=95.96  E-value=0.087  Score=46.03  Aligned_cols=97  Identities=11%  Similarity=0.037  Sum_probs=65.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhC----CCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFG----FDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .+.++|+-+| +|+.|+.++.+++.+  +.+++.+..+++..+.+++.+.    ...-+..... |..+...  ..++||
T Consensus       122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~--~l~~FD  197 (296)
T PLN03075        122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTE--SLKEYD  197 (296)
T ss_pred             CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhccc--ccCCcC
Confidence            3778999999 699999888888654  4589999999988888774332    2222222222 3322110  124799


Q ss_pred             EEEECC------Ch--hhHHHHHHhhccCCEEEEE
Q 037444          224 IYFENV------GG--KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~------g~--~~~~~~~~~l~~~G~~v~~  250 (339)
                      +||..+      ..  ..+.+..+.|++||.++.-
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr  232 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLR  232 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCCcEEEEe
Confidence            999875      22  2678899999999998754

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.95  E-value=0.26  Score=37.37  Aligned_cols=91  Identities=20%  Similarity=0.226  Sum_probs=57.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH--HHH-HHHHHHhCCCeeeeCCChhhHHHHHH--------------
Q 037444          155 VYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSK--EKV-DLLKNKFGFDDAFNYKEEPDLDAALK--------------  215 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~--~~~-~~~~~~~g~~~v~~~~~~~~~~~~v~--------------  215 (339)
                      |.|.|++|.+|..++++.+...  .+|++.+...  +.+ +.++ ++.+..++-.++.  ..+.++              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~--~~~~l~~~~~~~~~~~~v~~   77 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEE--AYEELKKALPSKGPGIEVLS   77 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHH--HHHHHHHHHHHTTSSSEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHH--HHHHHHHHhhhcCCCCEEEe
Confidence            6799999999999999999886  5887776432  232 3334 7888776655542  222222              


Q ss_pred             ------HhCC-CCccEEEECCCh-hhHHHHHHhhccCCEEE
Q 037444          216 ------RCFP-QGIDIYFENVGG-KMLDAVLLNMRLRGRIA  248 (339)
Q Consensus       216 ------~~~~-g~~d~vid~~g~-~~~~~~~~~l~~~G~~v  248 (339)
                            ++.. ..+|+|+.++-+ .-+.-.+..++.+-++.
T Consensus        78 G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   78 GPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             SHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             ChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence                  2222 367888887765 57777788888665543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=95.94  E-value=0.056  Score=46.01  Aligned_cols=79  Identities=14%  Similarity=0.113  Sum_probs=50.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhC--CCCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      .+++|+||+|++|..+++.+...|++|+++ .++.++.+....   ..+.. .  ..|..+.+.+.+.+.++.  .+++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            379999999999999999888889998875 455554433321   22321 1  224443323444444432  24799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999883

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.94  E-value=0.37  Score=39.59  Aligned_cols=101  Identities=16%  Similarity=0.217  Sum_probs=63.7

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHh
Q 037444          144 YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       144 ~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~  217 (339)
                      .....++++++||=.|  .+.|..++.+++.. +.+|+++..+++..+.+++   .++...  ++..    +..+.+..+
T Consensus        33 ~~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQL  106 (196)
T ss_pred             HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhC
Confidence            3556778889887776  46666777777654 5799999999988777663   345432  3322    222222222


Q ss_pred             CCCCccE-EEECCC--hhhHHHHHHhhccCCEEEEEe
Q 037444          218 FPQGIDI-YFENVG--GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       218 ~~g~~d~-vid~~g--~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      . ..+|. +++...  ...++.+.+.|+++|+++...
T Consensus       107 ~-~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 A-PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             C-CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            2 22344 444322  246788999999999988764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.94  E-value=0.094  Score=47.51  Aligned_cols=79  Identities=18%  Similarity=0.195  Sum_probs=51.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CC-CeeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--GF-DDAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--g~-~~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      -..+.+|||+||+|.+|..+++.+...|.+|+++.++.++.+.+.+.+  +. -.++..+-. + .+.+.+... ++|+|
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~-~~~~~~~~~-~~d~V   83 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQ-E-EGSFDEAVK-GCDGV   83 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCC-C-HHHHHHHHc-CCCEE
Confidence            346779999999999999999988888999999988776554433232  11 112222211 1 122333322 58999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.+
T Consensus        84 ih~A~   88 (353)
T PLN02896         84 FHVAA   88 (353)
T ss_pred             EECCc
Confidence            99886

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.93  E-value=0.053  Score=46.28  Aligned_cols=78  Identities=18%  Similarity=0.183  Sum_probs=48.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC-eee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .++||+||+|++|..+++.+...|++|+++. ++.++.+.+.+.   .+.. ..+  |-.+..++.+.+.++..  +++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999988888899988765 444443333212   2321 122  32222133333333321  3799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        83 ~li~~ag   89 (248)
T PRK06947         83 ALVNNAG   89 (248)
T ss_pred             EEEECCc
Confidence            9999887

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.93  E-value=0.16  Score=43.35  Aligned_cols=102  Identities=12%  Similarity=0.078  Sum_probs=69.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC-
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF-  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~-  218 (339)
                      ...+.....+||=+|  ..+|+.++.+|+.+  +.+|+.+..+++..+.+++   +.|...-+..... +..+.+.++. 
T Consensus        73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~  149 (247)
T PLN02589         73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE  149 (247)
T ss_pred             HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence            344556677899998  68899999999877  5699999999887766653   3454333333222 4444444432 


Q ss_pred             ----CCCccEEEECCChh----hHHHHHHhhccCCEEEE
Q 037444          219 ----PQGIDIYFENVGGK----MLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ----~g~~d~vid~~g~~----~~~~~~~~l~~~G~~v~  249 (339)
                          .+.||.||-=....    .++.++++|++||.++.
T Consensus       150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence                24799998544422    67788999999998764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.93  E-value=0.053  Score=48.53  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCC--eee--eCCChhhHHHHHHHhCCCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKFGFD--DAF--NYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~g~~--~v~--~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      .|.+|||+||+|.+|..+++.+...|  .+|+++.++..+...+.+.+...  .++  |-.+.    +.+.+... ++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~----~~l~~~~~-~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK----ERLTRALR-GVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH----HHHHHHHh-cCCE
Confidence            46789999999999999988776665  68998887765544333233221  122  33332    22333222 4899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ||++.|
T Consensus        78 Vih~Ag   83 (324)
T TIGR03589        78 VVHAAA   83 (324)
T ss_pred             EEECcc
Confidence            999887

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.91  E-value=0.045  Score=43.22  Aligned_cols=43  Identities=23%  Similarity=0.253  Sum_probs=39.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      .|..|+++|+.-++|...++-+...||+|+++.++++++..+-
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV   48 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV   48 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence            5788999999999999999999999999999999999876655

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.91  E-value=0.035  Score=43.67  Aligned_cols=82  Identities=21%  Similarity=0.230  Sum_probs=58.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCCeeeeCCCh---hhHHHHHHHhCC--CCcc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKNKFGFDDAFNYKEE---PDLDAALKRCFP--QGID  223 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~~~g~~~v~~~~~~---~~~~~~v~~~~~--g~~d  223 (339)
                      .+|-.-||+|+.+++|.++...+...|+.|+...-...+ .+.++ ++|-.-+|...+.   .+....+...-+  |..|
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vak-elg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAK-ELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHH-HhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            356667999999999999999999999999888866655 45556 8998666644332   144433333322  3789


Q ss_pred             EEEECCChh
Q 037444          224 IYFENVGGK  232 (339)
Q Consensus       224 ~vid~~g~~  232 (339)
                      +.++|.|..
T Consensus        86 ~~vncagia   94 (260)
T KOG1199|consen   86 ALVNCAGIA   94 (260)
T ss_pred             eeeecccee
Confidence            999999853

>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]

Probab=95.91  E-value=0.32  Score=38.34  Aligned_cols=119  Identities=17%  Similarity=0.097  Sum_probs=87.0

Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      |.+|..-.+|-.+. ...+.+.|-.||=.|.  +.|-..=.++++.  ...+.++..+.+-...+.+.+....+++.+..
T Consensus        28 aI~PsSs~lA~~M~-s~I~pesglpVlElGP--GTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~  104 (194)
T COG3963          28 AILPSSSILARKMA-SVIDPESGLPVLELGP--GTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAF  104 (194)
T ss_pred             eecCCcHHHHHHHH-hccCcccCCeeEEEcC--CccHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccccchh
Confidence            44566666676666 4567888889999986  3444444444433  34799999998888878756666678888876


Q ss_pred             hhHHHHHHHhCCCCccEEEECCCh---------hhHHHHHHhhccCCEEEEEec
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGG---------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                       ++...+.+..+..+|.||.++.-         ..++..+..|+.+|.++.+..
T Consensus       105 -~l~~~l~e~~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftY  157 (194)
T COG3963         105 -DLRTTLGEHKGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTY  157 (194)
T ss_pred             -hHHHHHhhcCCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence             77777777766689999998862         257888999999999998754

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.89  E-value=0.26  Score=35.11  Aligned_cols=86  Identities=20%  Similarity=0.183  Sum_probs=57.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEE-eCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAG---CYVVGS-AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~g---a~V~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|.|+|+ |.+|.+.+.-....|   .+|+.+ .+++++.+.+.++++... ...    +..+.++     ..|+||-|+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~-~~~----~~~~~~~-----~advvilav   69 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQA-TAD----DNEEAAQ-----EADVVILAV   69 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEE-ESE----EHHHHHH-----HTSEEEE-S
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccc-ccC----ChHHhhc-----cCCEEEEEE
Confidence            5778885 999999999888888   799955 999999888875776432 211    2233343     379999999


Q ss_pred             ChhhHHHHHHhh---ccCCEEEEE
Q 037444          230 GGKMLDAVLLNM---RLRGRIAVC  250 (339)
Q Consensus       230 g~~~~~~~~~~l---~~~G~~v~~  250 (339)
                      -...+...++.+   .++..++.+
T Consensus        70 ~p~~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   70 KPQQLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred             CHHHHHHHHHHHhhccCCCEEEEe
Confidence            977655555444   445555554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.07  Score=45.87  Aligned_cols=81  Identities=16%  Similarity=0.190  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS----KEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP-  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~----~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~-  219 (339)
                      .+.+++|+|++|++|..+++.+...|++|++++++    .++.+.+.+   ..+.. .  .+|..+.+++.+.+.+... 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            46789999999999999998888889997777543    222222221   23332 1  2244433233333333322 


Q ss_pred             -CCccEEEECCCh
Q 037444          220 -QGIDIYFENVGG  231 (339)
Q Consensus       220 -g~~d~vid~~g~  231 (339)
                       +++|++|++.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence             379999998874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.88  E-value=0.29  Score=36.24  Aligned_cols=91  Identities=18%  Similarity=0.126  Sum_probs=61.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      |+|.|. |.+|+.+++.++..+.+|+++..++++.+.++ +.|. .++..+..  -.+.+++..-..++.++-+.+.+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~-~~~~-~~i~gd~~--~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR-EEGV-EVIYGDAT--DPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTS-EEEES-TT--SHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH-hccc-ccccccch--hhhHHhhcCccccCEEEEccCCHHH
Confidence            578886 99999999999997779999999999999888 7774 45544432  2333444322379999988886532


Q ss_pred             H----HHHHhhccCCEEEEE
Q 037444          235 D----AVLLNMRLRGRIAVC  250 (339)
Q Consensus       235 ~----~~~~~l~~~G~~v~~  250 (339)
                      +    ...+-+.+..+++..
T Consensus        76 n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHCCCCeEEEE
Confidence            2    233444455666654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.87  E-value=0.078  Score=46.60  Aligned_cols=96  Identities=17%  Similarity=0.105  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH---HHHHHHHHHhCC---C-ee--eeCCChhhHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSK---EKVDLLKNKFGF---D-DA--FNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~---~~~~~~~~~~g~---~-~v--~~~~~~~~~~~~v~~~~~g  220 (339)
                      .+.+++|+|+ |++|.+++..+...|++ |+++.++.   ++.+.+.+++..   . .+  .+..+    .+.+.... .
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~----~~~~~~~~-~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND----TEKLKAEI-A  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh----hhHHHhhh-c
Confidence            5788999998 89999998888889995 99999885   444444324421   1 11  22211    11222221 2


Q ss_pred             CccEEEECCChhhH------HH-HHHhhccCCEEEEEec
Q 037444          221 GIDIYFENVGGKML------DA-VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~g~~~~------~~-~~~~l~~~G~~v~~g~  252 (339)
                      .+|++|+|+.-...      .. ....+.++..++++-.
T Consensus       199 ~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  237 (289)
T PRK12548        199 SSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVY  237 (289)
T ss_pred             cCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecC
Confidence            47999998852210      00 1345666666666543

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=95.85  E-value=0.03  Score=46.37  Aligned_cols=100  Identities=17%  Similarity=0.148  Sum_probs=66.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC---
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF---  218 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~---  218 (339)
                      .+.....+||-+|  ..+|+.++.+|+.+  +.+|+.+..+++..+.+++   ..|...-+..... +..+.+.++.   
T Consensus        41 ~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~~  117 (205)
T PF01596_consen   41 VRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELANDG  117 (205)
T ss_dssp             HHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHTT
T ss_pred             HHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhcc
Confidence            4455667899998  68899999999987  5799999999988777763   3454322222222 3334444332   


Q ss_pred             -CCCccEEEECCC-hh---hHHHHHHhhccCCEEEE
Q 037444          219 -PQGIDIYFENVG-GK---MLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 -~g~~d~vid~~g-~~---~~~~~~~~l~~~G~~v~  249 (339)
                       .+.||.||==.. ..   .+..++++|+++|.++.
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~  153 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIA  153 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEE
Confidence             247999974333 22   67788999999998875

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.84  E-value=0.1  Score=45.76  Aligned_cols=62  Identities=24%  Similarity=0.258  Sum_probs=49.8

Q ss_pred             hHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCe
Q 037444          138 TAYAGLYE---VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDD  200 (339)
Q Consensus       138 tA~~~l~~---~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~  200 (339)
                      .||.++.+   .+.+.||.++||-.-+|.+|..+..+++..|+++|++..   +.+++..++ .+|+.-
T Consensus        86 ia~sMi~~Ae~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaei  153 (362)
T KOG1252|consen   86 IAWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEI  153 (362)
T ss_pred             HHHHHHHHHHHcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEE
Confidence            34544432   367899999999999999999999999999999999864   346777787 888753

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.13  Score=42.20  Aligned_cols=63  Identities=17%  Similarity=0.228  Sum_probs=41.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +++|+|+++++|..++..+... ++|+.+.++...           ...|-.+.+.+.+.+.+.  +++|++|.+.|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag   64 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAG   64 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCC
Confidence            6899999999999888766655 899999876431           123333331333333322  46899998887

>PLN02244 tocopherol O-methyltransferase

Probab=95.83  E-value=0.073  Score=47.97  Aligned_cols=98  Identities=16%  Similarity=0.162  Sum_probs=64.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +++++||=+|  .+.|..+..+++..|++|+++..+++..+.+++   ..|...-+..... |..+ + ...++.||+|+
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~  191 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW  191 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence            6788988887  567778888998889999999999887766652   2233111111111 1111 0 11234799998


Q ss_pred             ECCCh-------hhHHHHHHhhccCCEEEEEec
Q 037444          227 ENVGG-------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       227 d~~g~-------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .....       ..+.++.+.|+++|+++....
T Consensus       192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            64331       267788999999999987654

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.81  E-value=0.071  Score=48.26  Aligned_cols=81  Identities=15%  Similarity=0.094  Sum_probs=49.6

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCHH--H--------------HHHHHHHhCCC-eee--eCCChh
Q 037444          150 KKGEYVYVSAASGAVGQL--VGQFAKLAGCYVVGSAGSKE--K--------------VDLLKNKFGFD-DAF--NYKEEP  208 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~--ai~la~~~ga~V~~~~~~~~--~--------------~~~~~~~~g~~-~v~--~~~~~~  208 (339)
                      ..+.++||+|+++++|++  .++.+ ..|++|+++....+  +              .+.++ +.|.. ..+  |-.+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence            456799999999999999  55666 88999888874221  1              22333 55643 223  323321


Q ss_pred             hHHHHHHHhCC--CCccEEEECCChh
Q 037444          209 DLDAALKRCFP--QGIDIYFENVGGK  232 (339)
Q Consensus       209 ~~~~~v~~~~~--g~~d~vid~~g~~  232 (339)
                      ...+.+.++..  |++|+++++++..
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            23333333322  4799999999854

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=95.81  E-value=0.08  Score=44.97  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=48.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhC---CC-eee--eCCChhhHHHHHHHhCC--CCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNKFG---FD-DAF--NYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~~g---~~-~v~--~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+++|+|++|++|..+++.+...|++|+++.++.+ ..+...+.+.   .. .++  |..+...+.+.+..+..  +.+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47999999999999999888888999999998743 1222211222   11 122  33332133333333221  3699


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        83 ~vi~~ag   89 (245)
T PRK12824         83 ILVNNAG   89 (245)
T ss_pred             EEEECCC
Confidence            9999887

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.79  E-value=0.089  Score=41.62  Aligned_cols=88  Identities=9%  Similarity=0.101  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|+|.|| |.+|..-++.+...|++|+++.  ++..+.++ +++.-. +..+   .+.+.    .-.++|+||-+++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence            5789999997 9999988888888999999885  33334455 443211 1111   11110    0126899999999


Q ss_pred             hhhHHHHHHhhccCCEEEEE
Q 037444          231 GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+.++..+...++.+.++..
T Consensus        80 d~e~N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         80 QHAVNMMVKQAAHDFQWVNV   99 (157)
T ss_pred             CHHHHHHHHHHHHHCCcEEE
Confidence            88777777766655444443

>PRK12827 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.066  Score=45.57  Aligned_cols=81  Identities=19%  Similarity=0.219  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHH---hCCC-eee--eCCChhhHHHHHHHhCC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG----SKEKVDLLKNK---FGFD-DAF--NYKEEPDLDAALKRCFP-  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~----~~~~~~~~~~~---~g~~-~v~--~~~~~~~~~~~v~~~~~-  219 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++.+    +.++.+.+.++   .+.. .++  |..+.+.+...+.++.. 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE   84 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999888889999988654    33333322212   2222 122  33332123333333221 


Q ss_pred             -CCccEEEECCCh
Q 037444          220 -QGIDIYFENVGG  231 (339)
Q Consensus       220 -g~~d~vid~~g~  231 (339)
                       +++|.+|.+.|.
T Consensus        85 ~~~~d~vi~~ag~   97 (249)
T PRK12827         85 FGRLDILVNNAGI   97 (249)
T ss_pred             hCCCCEEEECCCC
Confidence             379999999873

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.77  E-value=0.15  Score=42.61  Aligned_cols=103  Identities=14%  Similarity=0.115  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH-------------------HHHHHHHH---HhCC-CeeeeCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK-------------------EKVDLLKN---KFGF-DDAFNYKE  206 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~-------------------~~~~~~~~---~~g~-~~v~~~~~  206 (339)
                      +.++|+|.|. |++|.+++..+.+-|. ++..+.-..                   .+.+.++|   ..+. .+|.-.+.
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            4678999996 9999999999999998 666554221                   12222221   1222 11211111


Q ss_pred             hhhHHHHHHHhCCCCccEEEECCChhh--HHHHHHhhccCCEEEEEecccc
Q 037444          207 EPDLDAALKRCFPQGIDIYFENVGGKM--LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       207 ~~~~~~~v~~~~~g~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      - -..+.+.++...++|+|+||+.+-.  ......|.+.+=.+|..+..++
T Consensus       108 f-~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         108 F-ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             h-hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence            1 1234455555568999999999732  3334446666667776665444

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.064  Score=45.67  Aligned_cols=76  Identities=18%  Similarity=0.183  Sum_probs=48.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHH-----hCC-CCcc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKR-----CFP-QGID  223 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~-----~~~-g~~d  223 (339)
                      .++||+|++|++|..+++.+...|++|++++++.++ +... ..+..   ...|..+.+++...+.+     +.. ++.|
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            379999999999999998888889999999987653 2222 33332   12344443133332322     122 2688


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|.+.|
T Consensus        80 ~~v~~ag   86 (243)
T PRK07023         80 LLINNAG   86 (243)
T ss_pred             EEEEcCc
Confidence            9998876

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.77  E-value=0.34  Score=42.32  Aligned_cols=56  Identities=25%  Similarity=0.278  Sum_probs=45.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCeee
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA---GSKEKVDLLKNKFGFDDAF  202 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~---~~~~~~~~~~~~~g~~~v~  202 (339)
                      +.+.+++|. .+|=+-+|.+|.+++.+|+.+|++++.+.   .|.++.+.++ .+|+.-++
T Consensus        55 ~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~  113 (300)
T COG0031          55 KRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVIL  113 (300)
T ss_pred             HcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEE
Confidence            346689999 66778889999999999999999888885   4667888888 89986444

>PLN00203 glutamyl-tRNA reductase

Probab=95.76  E-value=0.15  Score=48.41  Aligned_cols=75  Identities=25%  Similarity=0.349  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.+.++...+ .....++..+.+     ...|+||.|+
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al-----~~aDVVIsAT  337 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACA-----AEADVVFTST  337 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHH-----hcCCEEEEcc
Confidence            3688999997 9999999999988997 799999999888777645642111 111100222222     2589999999


Q ss_pred             Chh
Q 037444          230 GGK  232 (339)
Q Consensus       230 g~~  232 (339)
                      +..
T Consensus       338 ~s~  340 (519)
T PLN00203        338 SSE  340 (519)
T ss_pred             CCC
Confidence            864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.76  E-value=0.039  Score=45.71  Aligned_cols=92  Identities=9%  Similarity=-0.015  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .|.+|||.|| |.+|...++.+...|++|+++.+... ....+. .-+.- .+..+   .+.+.  .+  .++|+||-++
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~i-~~~~~---~~~~~--~l--~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGKI-RWKQK---EFEPS--DI--VDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCCE-EEEec---CCChh--hc--CCceEEEEcC
Confidence            5789999997 99999988888889999998875432 212221 11211 11111   11110  00  2689999999


Q ss_pred             ChhhHHHHHHhhccCCEEEEEec
Q 037444          230 GGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+.++..+...+..+.++.+..
T Consensus        79 ~d~elN~~i~~~a~~~~lvn~~d  101 (202)
T PRK06718         79 NDPRVNEQVKEDLPENALFNVIT  101 (202)
T ss_pred             CCHHHHHHHHHHHHhCCcEEECC
Confidence            99887777766666566665543

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=95.75  E-value=0.026  Score=50.86  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ++.+|||+||+|.+|..+++.+...|.+|+++.++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            467899999999999999999999999999998754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.74  E-value=0.086  Score=45.30  Aligned_cols=43  Identities=33%  Similarity=0.401  Sum_probs=33.5

Q ss_pred             EEEEEcCCchHHHHHHH-HHHH---cCCEEEEEeCCHHHHHHHHHHh
Q 037444          154 YVYVSAASGAVGQLVGQ-FAKL---AGCYVVGSAGSKEKVDLLKNKF  196 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~-la~~---~ga~V~~~~~~~~~~~~~~~~~  196 (339)
                      .++|+|+++++|.+++. +++.   .|++|+.+.++.++.+.+.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l   48 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI   48 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence            58999999999998765 4443   6999999999988766654343

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06123 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.11  Score=44.27  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +.++||+|++|++|..+++.....|++|+... +++++.+.+.+   ..+.. ..  .|-.+...+.+.+.++..  +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999888888899887765 44443333321   23332 12  233332133443433322  378


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T PRK06123         82 DALVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK14982 acyl-ACP reductase; Provisional

Probab=95.72  E-value=0.063  Score=47.99  Aligned_cols=94  Identities=16%  Similarity=0.154  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAK-LAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~-~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      -.+.+|+|+||+|.+|..+++.+. ..|+ +++.+.++.++...+.++++...+.      ++.    +.. .+.|+|+.
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~----~~l-~~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLE----EAL-PEADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHH----HHH-ccCCEEEE
Confidence            367899999999999999887775 4565 8999988888777665455321111      222    222 25899999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEeccc
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +.+.. .+..-...+++.-.+++++.+.
T Consensus       222 ~ts~~~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        222 VASMPKGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             CCcCCcCCcCCHHHhCCCeEEEEecCCC
Confidence            99863 3212224556666667777643

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.72  E-value=0.041  Score=41.71  Aligned_cols=87  Identities=22%  Similarity=0.247  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .-+|-|+|+ |.+|..+...++..|..|..+. ++.+..+.+.+.++...+.+..+          .. ...|++|=++.
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~----------~~-~~aDlv~iavp   77 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE----------IL-RDADLVFIAVP   77 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG----------GG-CC-SEEEE-S-
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc----------cc-ccCCEEEEEec
Confidence            358999997 9999999999999999988875 55556666653444433332211          11 25899999999


Q ss_pred             hhhHHHHHHhhccC-----CEEEEE
Q 037444          231 GKMLDAVLLNMRLR-----GRIAVC  250 (339)
Q Consensus       231 ~~~~~~~~~~l~~~-----G~~v~~  250 (339)
                      .+.+...++.|...     |+++.-
T Consensus        78 DdaI~~va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   78 DDAIAEVAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             CCHHHHHHHHHHCC--S-TT-EEEE
T ss_pred             hHHHHHHHHHHHHhccCCCCcEEEE
Confidence            99888888888765     676654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=95.71  E-value=0.067  Score=47.15  Aligned_cols=74  Identities=27%  Similarity=0.412  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhC-CC---eeee--CCChhhHHHHHHHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV---DLLKNKFG-FD---DAFN--YKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~---~~~~~~~g-~~---~v~~--~~~~~~~~~~v~~~~~g~  221 (339)
                      .+.+|+|+||+|=+|.+++..+-..|++|.+++|++++.   +.++ ++. +.   .++.  -.+...+.+.+     .|
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai-----~g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAI-----DG   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHH-----hC
Confidence            568999999999999999999999999999999998863   3455 554 22   1221  11111233333     26


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|.||.+..
T Consensus        79 cdgVfH~As   87 (327)
T KOG1502|consen   79 CDGVFHTAS   87 (327)
T ss_pred             CCEEEEeCc
Confidence            999998764

>PRK01581 speE spermidine synthase; Validated

Probab=95.69  E-value=0.54  Score=42.33  Aligned_cols=97  Identities=11%  Similarity=0.070  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC--------C--CeeeeCCChhhHHHHHHHhC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFG--------F--DDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g--------~--~~v~~~~~~~~~~~~v~~~~  218 (339)
                      ....+|||.|  ||.|..+..+++..+ .+|+++..+++-.+.++ ++.        +  +.-+...-. |..+.++. .
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~  223 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-P  223 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-c
Confidence            3456999999  456777777887665 48999999988888887 421        1  111111111 33444443 3


Q ss_pred             CCCccEEEECCCh------------hhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVGG------------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.+|+||--...            +.+..+.+.|+++|.++.-.
T Consensus       224 ~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        224 SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            3479998764321            14678889999999987653

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.15  Score=44.45  Aligned_cols=79  Identities=16%  Similarity=0.128  Sum_probs=55.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      --.|.+++|.|+++-+|..++.++...|++|++.-+..   +                  ++.+.+     ..+|++|.+
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~-----~~aDIvI~A  209 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHh-----ccCCEEEEc
Confidence            35789999999855699999999999999777655321   1                  111122     248999999


Q ss_pred             CChhhHHHHHHhhccCCEEEEEeccc
Q 037444          229 VGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       229 ~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +|.+.+ -..+.++++-.++++|...
T Consensus       210 tG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        210 VGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            986532 2235688888888888643

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.67  E-value=0.12  Score=43.19  Aligned_cols=101  Identities=14%  Similarity=0.155  Sum_probs=63.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee------e-CCCh-hh-HHHHHHHhC-
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF------N-YKEE-PD-LDAALKRCF-  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~------~-~~~~-~~-~~~~v~~~~-  218 (339)
                      +.++.+||+.|  .|.|.-++-+|. .|.+|+++..|+.-.+.+.++.+.....      . +... .+ +...+.+.. 
T Consensus        32 ~~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999998  577888888875 6999999999998877654233331100      0 0000 00 000111111 


Q ss_pred             --CCCccEEEECCC---------hhhHHHHHHhhccCCEEEEEec
Q 037444          219 --PQGIDIYFENVG---------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 --~g~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                        .+.+|.|+|+..         ...+....++|+++|+++.+..
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence              136899999653         1257788999999998766654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.67  E-value=0.066  Score=46.00  Aligned_cols=35  Identities=20%  Similarity=0.103  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .+.++||+||++  ++|..++..+...|++|++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            457899999984  89999888888889999999876

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.66  E-value=0.059  Score=48.15  Aligned_cols=38  Identities=18%  Similarity=0.310  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      .+.++||+||+|.+|..++..+...|++|++++++.++
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~   41 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD   41 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence            46799999999999999999888899999988877554

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=95.65  E-value=0.042  Score=49.53  Aligned_cols=34  Identities=18%  Similarity=0.282  Sum_probs=30.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~   34 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS   34 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence            3799999999999999999988999999998764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.59  E-value=0.062  Score=47.97  Aligned_cols=40  Identities=23%  Similarity=0.292  Sum_probs=34.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD  190 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~  190 (339)
                      .|.+|||+||+|.+|..+++.+...|.+|+++.++.++.+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4679999999999999999888888999999988765433

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.55  E-value=0.17  Score=44.97  Aligned_cols=89  Identities=17%  Similarity=0.235  Sum_probs=59.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|.|+|. |.+|...+..++..|.  +|++..+++++.+.++ +.|....+..    +..+.+     ...|+||.|+.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~~----~~~~~~-----~~aDvViiavp   75 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVTT----SAAEAV-----KGADLVILCVP   75 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceecC----CHHHHh-----cCCCEEEECCC
Confidence            57999995 9999999888888884  8999999988888887 6775211111    221222     25889999888


Q ss_pred             hhhH----HHHHHhhccCCEEEEEec
Q 037444          231 GKML----DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~~~----~~~~~~l~~~G~~v~~g~  252 (339)
                      ....    ......++++..++.++.
T Consensus        76 ~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         76 VGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            6432    233344556666666654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=95.55  E-value=0.035  Score=47.67  Aligned_cols=73  Identities=12%  Similarity=0.079  Sum_probs=52.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~  231 (339)
                      +|||.||+|- |..++..+...|.+|+++++++...+.+. ..|...+....-  +-. .+.+.... ++|+|+|++..
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~~-~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DPQ-ELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CHH-HHHHHHHhcCCCEEEEcCCH
Confidence            7999998775 99888877788999999999988777766 555544543322  222 24444434 89999998873

This enzyme was found to be a monomer by gel filtration.

>PRK04457 spermidine synthase; Provisional

Probab=95.54  E-value=0.48  Score=40.98  Aligned_cols=94  Identities=10%  Similarity=0.095  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC------eeeeCCChhhHHHHHHHhCCCCc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFD------DAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~------~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      .++.+||++|.  +.|..+..+++.. +++|+++..+++-.+.+++.++..      +++..    |..+.+.+. .+.+
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~----Da~~~l~~~-~~~y  137 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA----DGAEYIAVH-RHST  137 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC----CHHHHHHhC-CCCC
Confidence            45678999994  4578888888876 569999999999888888555431      22322    444444432 3479


Q ss_pred             cEEEE-CCC----------hhhHHHHHHhhccCCEEEEE
Q 037444          223 DIYFE-NVG----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       223 d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      |+|+- ...          .+.++.+.++|+++|.++..
T Consensus       138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            99873 211          13678899999999999863

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.53  E-value=0.093  Score=45.11  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC-----------HHHH----HHHHHHhCCC-ee--eeCCChhhH
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGS-----------KEKV----DLLKNKFGFD-DA--FNYKEEPDL  210 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~-----------~~~~----~~~~~~~g~~-~v--~~~~~~~~~  210 (339)
                      .|.+++|+||+  +++|..++..+...|++|++++++           .++.    +.++ +.|.. ..  .|-.+.+++
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHHH
Confidence            57899999998  489999998888899999987532           1111    1222 33432 12  233333244


Q ss_pred             HHHHHHhCC--CCccEEEECCC
Q 037444          211 DAALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       211 ~~~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.+.++..  +.+|++|.+.|
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag  105 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAA  105 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCC
Confidence            444443322  36899999886

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.53  E-value=0.048  Score=41.30  Aligned_cols=92  Identities=20%  Similarity=0.171  Sum_probs=51.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHH-H---HHHHHHHhCC--CeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKE-K---VDLLKNKFGF--DDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~-~---~~~~~~~~g~--~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +|.|+|.+|.+|..+++.+.. .+.++.+...+.. .   .+.-. -.|.  ..+..++   ++    .+.... +|++|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~-~~~~~~~~~~v~~---~l----~~~~~~-~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGE-LAGIGPLGVPVTD---DL----EELLEE-ADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHH-HCTSST-SSBEBS----H----HHHTTH--SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhh-hhCcCCcccccch---hH----HHhccc-CCEEE
Confidence            689999999999999999987 5777665543332 0   01000 1121  1111111   33    333322 89999


Q ss_pred             ECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          227 ENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       227 d~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      |++..+.....++.+...|.-+.+|.++
T Consensus        73 DfT~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             EES-HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             EcCChHHhHHHHHHHHhCCCCEEEECCC
Confidence            9997666655666556667777777643

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=95.51  E-value=0.073  Score=44.87  Aligned_cols=74  Identities=15%  Similarity=0.218  Sum_probs=50.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      |||+||+|-+|..++..+...|.+|+.+.++.............. ...|..+.+.+.+.+...   .+|.||++.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence            799999999999999999999999998888776654443122322 223444431333333322   68999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.49  E-value=0.17  Score=47.25  Aligned_cols=44  Identities=20%  Similarity=0.394  Sum_probs=36.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGF  198 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~  198 (339)
                      +|.|+||.|.+|.+.+..++..|.+|+++.+++++. +.+. ++|.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv   46 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV   46 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence            689999889999999999999999999999887764 3344 5664

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.44  E-value=0.33  Score=41.80  Aligned_cols=94  Identities=17%  Similarity=0.189  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .++.+||=.|  ++.|..+..+++. |.+|+++..+++..+.+++.   .|..   .++..    +..+ +.....+.+|
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~----d~~~-l~~~~~~~fD  114 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC----AAQD-IAQHLETPVD  114 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc----CHHH-HhhhcCCCCC
Confidence            4567888777  6778888888875 88999999999888777632   2321   22222    2211 2222334799


Q ss_pred             EEEECCC-----h--hhHHHHHHhhccCCEEEEEe
Q 037444          224 IYFENVG-----G--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       224 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+....     .  ..+..+.+.|+++|.++.+-
T Consensus       115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9986432     2  25788999999999997653

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.41  E-value=0.14  Score=45.77  Aligned_cols=93  Identities=12%  Similarity=0.064  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHH-HHHcCC-EEEEEeCCHHHHHHHHHHh----CCCeeeeCCChhhHHHHHHHhCCCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQF-AKLAGC-YVVGSAGSKEKVDLLKNKF----GFDDAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~l-a~~~ga-~V~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      ...+++|.|+ |..|.+.+.. +...++ +|.+..+++++.+.+.+++    +.. +..+.   ++.+.+     ...|+
T Consensus       126 ~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~-----~~aDi  195 (325)
T PRK08618        126 DAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAI-----EEADI  195 (325)
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHH-----hcCCE
Confidence            4578999995 9999877654 445677 7888888888876665343    332 22222   333333     25899


Q ss_pred             EEECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          225 YFENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       225 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      |+.|+++...... ++++++-.+..+|...
T Consensus       196 Vi~aT~s~~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        196 IVTVTNAKTPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             EEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence            9999997543344 8889988888888743

>PRK14967 putative methyltransferase; Provisional

Probab=95.38  E-value=0.59  Score=39.30  Aligned_cols=95  Identities=21%  Similarity=0.151  Sum_probs=62.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCC-eeeeCCChhhHHHHHHHhCCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN---KFGFD-DAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ..+.++++||-.|. |. |..++.+++. ++ +|+++..+++..+.+++   ..+.. .+++.    ++.+.   ...+.
T Consensus        32 ~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~~  101 (223)
T PRK14967         32 EGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFRP  101 (223)
T ss_pred             cccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCCC
Confidence            45788999999984 54 8888888875 66 99999999887766553   23332 22222    33222   12347


Q ss_pred             ccEEEECCC----------------------------hhhHHHHHHhhccCCEEEEEe
Q 037444          222 IDIYFENVG----------------------------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       222 ~d~vid~~g----------------------------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+|+...+                            ...+.++.+.|+++|+++.+-
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~  159 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ  159 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            999997521                            013456789999999988763

>PLN02214 cinnamoyl-CoA reductase

Probab=95.37  E-value=0.11  Score=46.85  Aligned_cols=39  Identities=21%  Similarity=0.307  Sum_probs=34.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++.++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   46 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD   46 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence            356789999999999999999988899999999987654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=95.35  E-value=0.15  Score=41.39  Aligned_cols=76  Identities=17%  Similarity=0.208  Sum_probs=43.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH-------HHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK-------EKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~-------~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      ++||+|+.|++|+..++.+...|+ +++.+.++.       +..+.++ +.|.. ..  .|-.+.+.+.+.+.++..  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELE-SAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHH-HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHH-hCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            689999999999999988887766 899999882       1234444 45552 11  233333133333333322  2


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      .++.||.+.|
T Consensus        81 ~i~gVih~ag   90 (181)
T PF08659_consen   81 PIDGVIHAAG   90 (181)
T ss_dssp             -EEEEEE---
T ss_pred             Ccceeeeeee
Confidence            6788888776

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.34  E-value=0.096  Score=44.23  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=47.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhC--CCCccEE
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      +||+|++|.+|..+++.+...|++|+++.++. ++.+.+.+   ..|.. .  ..|..+...+.+.+....  .+++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999988888899999998764 33222211   33431 1  224333312223232221  1368999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      +.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998883

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PLN02686 cinnamoyl-CoA reductase

Probab=95.32  E-value=0.16  Score=46.27  Aligned_cols=45  Identities=16%  Similarity=0.141  Sum_probs=37.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      ...+.+|||+||+|.+|..+++.+...|++|+++.++.++.+.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            356789999999999999999999889999999888776655444

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=95.32  E-value=0.13  Score=43.88  Aligned_cols=81  Identities=23%  Similarity=0.295  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhC-----CCe--eeeCCC-hhhHHHHHHHhCC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFG-----FDD--AFNYKE-EPDLDAALKRCFP-  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g-----~~~--v~~~~~-~~~~~~~v~~~~~-  219 (339)
                      .+..+||+|+++++|.+++..+...|++|+++.++.+.  .+.+.+...     ...  ..|..+ .......+..+.. 
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999888877999998888877543  233331222     111  134443 2133333333322 


Q ss_pred             -CCccEEEECCCh
Q 037444          220 -QGIDIYFENVGG  231 (339)
Q Consensus       220 -g~~d~vid~~g~  231 (339)
                       |++|+++++.|.
T Consensus        84 ~g~id~lvnnAg~   96 (251)
T COG1028          84 FGRIDILVNNAGI   96 (251)
T ss_pred             cCCCCEEEECCCC
Confidence             469999998883

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.32  E-value=0.21  Score=38.62  Aligned_cols=94  Identities=14%  Similarity=0.077  Sum_probs=64.1

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +|+........|....---.|.+|+|+|.+..+|.-++.++...|++|+...+...                     ++.
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~   66 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQ   66 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHH
Confidence            44444444444433222247999999999999999999999999999998864322                     222


Q ss_pred             HHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEec
Q 037444          212 AALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.++     ..|+|+.++|...+ ---++++++-.++.+|.
T Consensus        67 ~~v~-----~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~  101 (140)
T cd05212          67 SKVH-----DADVVVVGSPKPEK-VPTEWIKPGATVINCSP  101 (140)
T ss_pred             HHHh-----hCCEEEEecCCCCc-cCHHHcCCCCEEEEcCC
Confidence            2222     37899999987532 22467889888887765

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.28  E-value=0.68  Score=37.69  Aligned_cols=96  Identities=16%  Similarity=0.216  Sum_probs=63.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~~  218 (339)
                      ....+.++.+||=.|  .+.|..++.+++.. +.+|+++..+++..+.+++   .++...  ++..    +...    ..
T Consensus        25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~----d~~~----~~   94 (187)
T PRK08287         25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG----EAPI----EL   94 (187)
T ss_pred             HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec----Cchh----hc
Confidence            445677888988887  45578888888766 4699999999887766653   233322  2221    2111    11


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+.+|+|+.....    ..+..+.+.|+++|+++..
T Consensus        95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            2479999864321    2667889999999998764

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=95.27  E-value=0.089  Score=49.49  Aligned_cols=76  Identities=14%  Similarity=0.205  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----Ce---ee-eCCChhhHHHHHHHhCCC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF----DD---AF-NYKEEPDLDAALKRCFPQ-  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~----~~---v~-~~~~~~~~~~~v~~~~~g-  220 (339)
                      .|.+|||+||+|++|...+.-....+. +++..++++.+...+..++..    ..   ++ |-++    .+.+.+...+ 
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD----~~~~~~~~~~~  324 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD----RDRVERAMEGH  324 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc----HHHHHHHHhcC
Confidence            688999999999999887644444466 888888888776554433322    11   11 2222    3345555556 


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+||.+..
T Consensus       325 kvd~VfHAAA  334 (588)
T COG1086         325 KVDIVFHAAA  334 (588)
T ss_pred             CCceEEEhhh
Confidence            8999999775

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.13  Score=43.85  Aligned_cols=41  Identities=17%  Similarity=0.326  Sum_probs=33.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLK  193 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~  193 (339)
                      .+++|+||+|++|..+++.+...|++|+++++++ ++.+.+.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   43 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA   43 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH
Confidence            3799999999999999988888899999999876 3444333

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.25  E-value=0.15  Score=44.23  Aligned_cols=94  Identities=20%  Similarity=0.139  Sum_probs=66.0

Q ss_pred             cCchhhhHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          132 LGMPGVTAYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      +|++....+..| +..++ -.|.+|+|.|.+.-+|.-+..++...|++|++.-+..                    . ++
T Consensus       138 ~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t--------------------~-~l  195 (285)
T PRK14189        138 RPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT--------------------R-DL  195 (285)
T ss_pred             cCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC--------------------C-CH
Confidence            455544444444 33443 4799999999988889999999999999998743211                    1 33


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.++     ..|+|+-++|...+-. -++++++-.++++|..
T Consensus       196 ~~~~~-----~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin  232 (285)
T PRK14189        196 AAHTR-----QADIVVAAVGKRNVLT-ADMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHhh-----hCCEEEEcCCCcCccC-HHHcCCCCEEEEcccc
Confidence            33333     3899999999764322 2889999999999864

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=95.24  E-value=0.11  Score=46.83  Aligned_cols=74  Identities=12%  Similarity=0.042  Sum_probs=45.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|-+|..+++.+... |.+|+++.++.++...+. ....-+++..+-. +-.+.+.++.. ++|+||++.+
T Consensus         3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~Dl~-~~~~~~~~~~~-~~d~ViH~aa   77 (347)
T PRK11908          3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV-NHPRMHFFEGDIT-INKEWIEYHVK-KCDVILPLVA   77 (347)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc-cCCCeEEEeCCCC-CCHHHHHHHHc-CCCEEEECcc
Confidence            6999999999999999887765 689999998765443332 1111122222210 01122333322 5999999765

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.16  E-value=0.037  Score=46.77  Aligned_cols=72  Identities=15%  Similarity=0.125  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+.+++|+|++|++|..++..+...|++|+++.++....      ... -..+..+-. +..+++.+.. +++|+++++.
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~-~~~~~~~~~~-~~id~lv~~a   75 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLS-DDLEPLFDWV-PSVDILCNTA   75 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChH-HHHHHHHHhh-CCCCEEEECC
Confidence            467899999999999999988888899999998764321      111 112222211 1112222221 3699999988


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      |
T Consensus        76 g   76 (235)
T PRK06550         76 G   76 (235)
T ss_pred             C
Confidence            7

>PRK08317 hypothetical protein; Provisional

Probab=95.16  E-value=0.18  Score=42.60  Aligned_cols=102  Identities=23%  Similarity=0.301  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKF-GFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +...+.++++||-.|. | .|..+..+++..+  .+++++..+++..+.+++.. .....+..... +... . ....+.
T Consensus        13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~   87 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS   87 (241)
T ss_pred             HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence            5567889999999995 4 4889999998873  59999999988888777321 11111111111 1110 0 112247


Q ss_pred             ccEEEECC-----Ch--hhHHHHHHhhccCCEEEEEe
Q 037444          222 IDIYFENV-----GG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       222 ~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+|+...     ..  ..+..+.++|+++|.++...
T Consensus        88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            89888643     22  36788999999999998764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.15  E-value=0.14  Score=43.36  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=46.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHH---hCCC-e--eeeCCChhhHHHHHHHhC--CCCccEE
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKNK---FGFD-D--AFNYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      ++|+|++|++|..+++.+...|++|++++++. ++.+.+.++   .+.. +  ..|..+...+...+.+..  .+.+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999888999999887653 333322212   2321 1  233333313333333221  2468999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |.+.|
T Consensus        81 i~~ag   85 (239)
T TIGR01831        81 VLNAG   85 (239)
T ss_pred             EECCC
Confidence            98776

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.13  E-value=0.1  Score=44.53  Aligned_cols=105  Identities=15%  Similarity=0.226  Sum_probs=66.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHH-HHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLD-AALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~-~~v~~~~  218 (339)
                      ...++.||++|+=.|  .|.|.+...+++..|-  +|+....++++.+.+++   ..|....+..... |+. +-..+-.
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~  110 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL  110 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence            557899999998877  5778888888888764  99999999998777764   3455422211111 211 1111111


Q ss_pred             CCCccEEEECCCh--hhHHHHHHhh-ccCCEEEEEec
Q 037444          219 PQGIDIYFENVGG--KMLDAVLLNM-RLRGRIAVCGM  252 (339)
Q Consensus       219 ~g~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g~  252 (339)
                      .+.+|.||-=...  ..+..+.+.| +++|+++.+..
T Consensus       111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            2368888765554  4899999999 89999988753

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=95.11  E-value=0.093  Score=51.87  Aligned_cols=78  Identities=10%  Similarity=0.004  Sum_probs=48.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .++.+|||+||+|-+|..+++.+... |.+|+++.+......... ...--+.+..+-. +....+.+... ++|+||++
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~-~~~~~~~~~gDl~-d~~~~l~~~l~-~~D~ViHl  389 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL-GHPRFHFVEGDIS-IHSEWIEYHIK-KCDVVLPL  389 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc-CCCceEEEecccc-CcHHHHHHHhc-CCCEEEEC
Confidence            56789999999999999999887765 789999998665432221 1111122222211 11122333322 59999997


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .+
T Consensus       390 Aa  391 (660)
T PRK08125        390 VA  391 (660)
T ss_pred             cc
Confidence            76

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.11  E-value=0.13  Score=42.35  Aligned_cols=99  Identities=12%  Similarity=0.101  Sum_probs=60.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +.....++.+||-.|  .|.|..++.+++ .|.+|+++..+++-.+.+++   ..+..  +..... ++.. . . ..+.
T Consensus        24 ~~~~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~   94 (195)
T TIGR00477        24 EAVKTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNED   94 (195)
T ss_pred             HHhccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCC
Confidence            444455567888888  477888888877 48899999999876666542   22322  111111 2111 0 1 1236


Q ss_pred             ccEEEECC-----Ch----hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENV-----GG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+|+.+.     ..    ..+..+.++|+++|.++.+..
T Consensus        95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477        95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            99998642     21    266788899999999655543

Part of a tellurite-reducing operon tehA and tehB

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=95.11  E-value=0.074  Score=44.07  Aligned_cols=102  Identities=23%  Similarity=0.287  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----ee-e-eCC---ChhhHHHHHHHhCC--C
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD----DA-F-NYK---EEPDLDAALKRCFP--Q  220 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~----~v-~-~~~---~~~~~~~~v~~~~~--g  220 (339)
                      |..++++|+.|++|+.....+-..|+++.++..+.|+.+... +|.+-    .+ | .++   .. ++.+..+++..  |
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~-~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRG-DLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHH-HHHHHHHHHHHHhC
Confidence            789999999999999999988899999999998888877666 66541    22 1 121   22 45555555443  4


Q ss_pred             CccEEEECCCh---hhHHH---------------HHHhh-----ccCCEEEEEecccc
Q 037444          221 GIDIYFENVGG---KMLDA---------------VLLNM-----RLRGRIAVCGMISQ  255 (339)
Q Consensus       221 ~~d~vid~~g~---~~~~~---------------~~~~l-----~~~G~~v~~g~~~~  255 (339)
                      .+|++|+..|-   ..+++               ++..+     .++|.++.+++..+
T Consensus        83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            79999998872   23322               22222     26789998887554

>PLN02240 UDP-glucose 4-epimerase

Probab=95.11  E-value=0.13  Score=46.52  Aligned_cols=35  Identities=26%  Similarity=0.245  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++.
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            35789999999999999998888889999998753

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.11  E-value=0.41  Score=41.21  Aligned_cols=97  Identities=14%  Similarity=0.153  Sum_probs=66.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ....+.++++||=+|  .+.|..+..+++.. +.+|+++..++.-.+.+++.+.-..++..    +..+.   ...+.+|
T Consensus        25 ~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~----d~~~~---~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA----DIASW---QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEc--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC----chhcc---CCCCCcc
Confidence            445667889999888  46778888888876 57999999999888877733322223322    22111   1123799


Q ss_pred             EEEECCC-----h--hhHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVG-----G--KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+....     .  ..+.++.+.|+++|.++..
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            9986543     1  2678889999999998765

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.23  Score=43.10  Aligned_cols=93  Identities=19%  Similarity=0.117  Sum_probs=66.4

Q ss_pred             cCchhhhHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          132 LGMPGVTAYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      +|++....+..| +..++ -.|.+++|.|.+.-+|.-+.+++...||+|++.-+...                     ++
T Consensus       139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~l  196 (285)
T PRK10792        139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------NL  196 (285)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------CH
Confidence            455555555555 43444 36999999999888999999999999999988753311                     33


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEec
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .+.++     .+|++|.++|.+.+-. -++++++-.++++|.
T Consensus       197 ~~~~~-----~ADIvi~avG~p~~v~-~~~vk~gavVIDvGi  232 (285)
T PRK10792        197 RHHVR-----NADLLVVAVGKPGFIP-GEWIKPGAIVIDVGI  232 (285)
T ss_pred             HHHHh-----hCCEEEEcCCCccccc-HHHcCCCcEEEEccc
Confidence            33332     3899999999764422 278899999999985

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.10  E-value=0.35  Score=41.83  Aligned_cols=100  Identities=16%  Similarity=0.176  Sum_probs=65.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhC------CC--eeeeCCChhhHHHHH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKFG------FD--DAFNYKEEPDLDAAL  214 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~g------~~--~v~~~~~~~~~~~~v  214 (339)
                      +...++++++||=.|.  +.|..+..+++..|  .+|+++..+++-.+.+++...      ..  .++..+.. ++    
T Consensus        67 ~~~~~~~~~~VLDlGc--GtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~l----  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCC--GSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-DL----  139 (261)
T ss_pred             HHhCCCCCCEEEEECC--cCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-cC----
Confidence            3456788999998884  55667778888765  599999999988777763322      11  12221111 11    


Q ss_pred             HHhCCCCccEEEECCC-----h--hhHHHHHHhhccCCEEEEEec
Q 037444          215 KRCFPQGIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                       ...++.+|.|+-..+     .  ..+.++.+.|+++|+++.+..
T Consensus       140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~  183 (261)
T PLN02233        140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDF  183 (261)
T ss_pred             -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence             111237999986443     1  268899999999999987755

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.09  E-value=0.12  Score=40.30  Aligned_cols=96  Identities=17%  Similarity=0.183  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-----hhhHHHHHHHhCCC-CccEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-----EPDLDAALKRCFPQ-GIDIY  225 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-----~~~~~~~v~~~~~g-~~d~v  225 (339)
                      ..+|+|+|+-|.+|.++++.-|..++-|..+.-++.+..      ...-+++.+.     ++...+++.....| ++|.|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav   76 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV   76 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc------cceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence            357999999999999999999999998888876544211      1122333332     11233444555566 99999


Q ss_pred             EECCChh--------h--------H-----------HHHHHhhccCCEEEEEecc
Q 037444          226 FENVGGK--------M--------L-----------DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       226 id~~g~~--------~--------~-----------~~~~~~l~~~G~~v~~g~~  253 (339)
                      |+..|+=        .        +           ..+..+|+++|-+-+.|..
T Consensus        77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk  131 (236)
T KOG4022|consen   77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK  131 (236)
T ss_pred             EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence            9976531        1        1           1244588899988877753

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.06  E-value=0.27  Score=41.50  Aligned_cols=85  Identities=18%  Similarity=0.179  Sum_probs=59.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK-NKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +++|.|+ |.+|..+++.+...|.+|+++..++++..... +++.. +++..+.  .-.+.+++.--..+|+++-++|.+
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~--t~~~~L~~agi~~aD~vva~t~~d   77 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDA--TDEDVLEEAGIDDADAVVAATGND   77 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecC--CCHHHHHhcCCCcCCEEEEeeCCC
Confidence            6889996 99999999999999999999999998877643 12433 4444333  223445554333899999999987


Q ss_pred             hHHHHHHhhc
Q 037444          233 MLDAVLLNMR  242 (339)
Q Consensus       233 ~~~~~~~~l~  242 (339)
                      ..+..+-.++
T Consensus        78 ~~N~i~~~la   87 (225)
T COG0569          78 EVNSVLALLA   87 (225)
T ss_pred             HHHHHHHHHH
Confidence            5554444433

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.32  Score=42.25  Aligned_cols=95  Identities=20%  Similarity=0.110  Sum_probs=66.0

Q ss_pred             ccCchhhhHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh
Q 037444          131 ILGMPGVTAYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD  209 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  209 (339)
                      -+|++....+..| +..++ -.|.+|+|.|.+..+|.-+..++...||.|++.-....                     +
T Consensus       136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~  193 (285)
T PRK14191        136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------D  193 (285)
T ss_pred             CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------H
Confidence            3455555555555 44444 36999999999889999999999999999987532211                     2


Q ss_pred             HHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          210 LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       210 ~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +.+.++     ..|+|+-++|.+.+-. -++++++..++++|..
T Consensus       194 l~~~~~-----~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~  231 (285)
T PRK14191        194 LSFYTQ-----NADIVCVGVGKPDLIK-ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHH-----hCCEEEEecCCCCcCC-HHHcCCCcEEEEeecc
Confidence            222332     3899999999764422 4577889899999863

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.27  Score=43.13  Aligned_cols=93  Identities=18%  Similarity=0.174  Sum_probs=64.0

Q ss_pred             ccCchhhhHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHhCCCeeeeCCChh
Q 037444          131 ILGMPGVTAYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNKFGFDDAFNYKEEP  208 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~  208 (339)
                      -+|++....+..| +..++ -.|.+|+|+|.++.+|.-.+.++...|+.|++.- ++.+                     
T Consensus       137 ~~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------  194 (296)
T PRK14188        137 LVPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------  194 (296)
T ss_pred             CcCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence            3555544455555 33343 5799999999999999999999988999999873 3321                     


Q ss_pred             hHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecc
Q 037444          209 DLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       209 ~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~  253 (339)
                       +.+.++     ..|+|+-++|.+ .+...  +++++..++++|..
T Consensus       195 -l~e~~~-----~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin  232 (296)
T PRK14188        195 -LPAVCR-----RADILVAAVGRPEMVKGD--WIKPGATVIDVGIN  232 (296)
T ss_pred             -HHHHHh-----cCCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence             111111     378999999975 33333  38888888898863

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=94.99  E-value=0.09  Score=46.54  Aligned_cols=73  Identities=11%  Similarity=0.097  Sum_probs=44.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH--HHHHHHHHHhCC---Ceee--eCCChhhHHHHHHHhCCC-Ccc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSK--EKVDLLKNKFGF---DDAF--NYKEEPDLDAALKRCFPQ-GID  223 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~--~~~~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~g-~~d  223 (339)
                      +|+|+||+|.+|..+++.+...|  .+|+++.+..  .+.+.+. .+..   ..++  |..+.    +.+.++..+ ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLEDNPRYRFVKGDIGDR----ELVSRLFTEHQPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhccCCCcEEEEcCCcCH----HHHHHHHhhcCCC
Confidence            58999999999999998777666  6888876421  2222222 2211   1223  22232    233333334 699


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      +||++.+.
T Consensus        76 ~vi~~a~~   83 (317)
T TIGR01181        76 AVVHFAAE   83 (317)
T ss_pred             EEEEcccc
Confidence            99999973

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK07574 formate dehydrogenase; Provisional

Probab=94.98  E-value=0.16  Score=46.31  Aligned_cols=89  Identities=15%  Similarity=0.106  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|..+++.++.+|.+|++..++....+..+ .+|...   +.   ++.+.++     ..|+|+-++.
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~~---~l~ell~-----~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---HV---SFDSLVS-----VCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---cC---CHHHHhh-----cCCEEEEcCC
Confidence            5678999995 99999999999999999999997753323333 444321   01   2222221     3677777776


Q ss_pred             h-h----hH-HHHHHhhccCCEEEEEec
Q 037444          231 G-K----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      . +    .+ ...+..|+++..+|.++.
T Consensus       258 lt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            2 2    11 245667777776666653

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.95  E-value=0.62  Score=37.78  Aligned_cols=39  Identities=26%  Similarity=0.231  Sum_probs=32.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      +|.|.|+ |.+|...+.++...|.+|.....+++..+..+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence            5889997 99999988888888999999999998776554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=94.91  E-value=0.027  Score=49.34  Aligned_cols=67  Identities=16%  Similarity=0.126  Sum_probs=44.7

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      |||+||+|-+|..+++.+...|.+|+++.++..+..... ..+   +.+.... .+.    +.. .++|+||++.+.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~---~~~~~~~-~~~----~~~-~~~D~Vvh~a~~   67 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEG---YKPWAPL-AES----EAL-EGADAVINLAGE   67 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-cee---eeccccc-chh----hhc-CCCCEEEECCCC
Confidence            689999999999999988889999999998876543222 111   1111111 111    111 369999999973

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.89  E-value=0.12  Score=42.67  Aligned_cols=48  Identities=23%  Similarity=0.258  Sum_probs=41.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      -.|.+++|+|. |.+|..+++.+...|++|+++.++.++.+.+.+.+|+
T Consensus        26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~   73 (200)
T cd01075          26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGA   73 (200)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC
Confidence            36789999996 8999999999999999999999888887777645564

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02427 UDP-apiose/xylose synthase

Probab=94.88  E-value=0.17  Score=46.49  Aligned_cols=76  Identities=13%  Similarity=0.051  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC------CeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGF------DDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      +..+|||+||+|-+|..+++.+... |.+|+++.++.++...+. ..+.      -+++..+-. + .+.+.+... ++|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~-d-~~~l~~~~~-~~d   88 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIK-H-DSRLEGLIK-MAD   88 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCC-C-hHHHHHHhh-cCC
Confidence            4468999999999999999888777 589999998766555443 2221      112222111 1 123333333 589


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      +||++.+
T Consensus        89 ~ViHlAa   95 (386)
T PLN02427         89 LTINLAA   95 (386)
T ss_pred             EEEEccc
Confidence            9999886

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=94.88  E-value=0.12  Score=46.01  Aligned_cols=38  Identities=21%  Similarity=0.292  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      .+.+|||+||+|-+|..++..+...|.+|++++++.++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~   40 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND   40 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            35789999999999999999888889999999877543

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=94.87  E-value=0.15  Score=42.77  Aligned_cols=98  Identities=14%  Similarity=0.077  Sum_probs=61.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--------------eeCCChhhHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--------------FNYKEEPDLDAA  213 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~  213 (339)
                      .+.++.+||+.|  .|.|.-++.+|. .|.+|+++..++...+.+.++.+....              ++.... |+.+.
T Consensus        34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l  109 (218)
T PRK13255         34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL  109 (218)
T ss_pred             CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence            445778999998  577888888875 799999999999877765424433210              000000 11110


Q ss_pred             HHHhCCCCccEEEECCC---------hhhHHHHHHhhccCCEEEEE
Q 037444          214 LKRCFPQGIDIYFENVG---------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      - ....+.+|.|+|...         ...+....++|+++|+++.+
T Consensus       110 ~-~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        110 T-AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             C-cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence            0 001136899998653         12577888999999875543

>PLN03139 formate dehydrogenase; Provisional

Probab=94.85  E-value=0.19  Score=45.96  Aligned_cols=89  Identities=27%  Similarity=0.242  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|...++.++.+|.+|++..++....+... +.|+..+     . ++.+.+.     ..|+|+-++.
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~-----~-~l~ell~-----~sDvV~l~lP  264 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE-----E-DLDAMLP-----KCDVVVINTP  264 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec-----C-CHHHHHh-----hCCEEEEeCC
Confidence            5779999995 99999999999999999999887643333333 4443211     0 3333222     2677777666


Q ss_pred             h-h----hH-HHHHHhhccCCEEEEEec
Q 037444          231 G-K----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      . +    .+ ...+..|+++..+|.++.
T Consensus       265 lt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        265 LTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            2 1    11 245667777766666653

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=94.84  E-value=0.1  Score=45.75  Aligned_cols=32  Identities=25%  Similarity=0.387  Sum_probs=29.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      +|||+|++|.+|.++.+.++..|.+|+.+.++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~   33 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS   33 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence            79999999999999999999999999999765

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.84  E-value=0.16  Score=44.04  Aligned_cols=150  Identities=17%  Similarity=0.095  Sum_probs=90.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh----------hhHHHHHHHhC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE----------PDLDAALKRCF  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~----------~~~~~~v~~~~  218 (339)
                      -.++.++++.|+ |.+|+.++-.++..|+-|....-...+.+..+ ++|+...-..+++          +++..+=.++.
T Consensus       161 tv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~  238 (356)
T COG3288         161 TVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV  238 (356)
T ss_pred             cccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence            346678899996 99999999999999999999888888777777 7887422111110          12322222222


Q ss_pred             -C--CCccEEEECCC--h-h----hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc---
Q 037444          219 -P--QGIDIYFENVG--G-K----MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---  285 (339)
Q Consensus       219 -~--g~~d~vid~~g--~-~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  285 (339)
                       .  .++|+||-+.=  + +    .-..+...+++|..+|++....+-|-....+   ..-...+++++.|...-.-   
T Consensus       239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~p---g~~v~~~gV~iig~~nlp~r~a  315 (356)
T COG3288         239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEP---GKVVTKNGVKIIGYTNLPGRLA  315 (356)
T ss_pred             HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccC---CeEEEeCCeEEEeecCcchhhh
Confidence             1  27999998763  2 2    3457889999999999987655544322111   1112234566665432111   


Q ss_pred             ---cchhHHHHHHHHHHHHcC
Q 037444          286 ---YHLYPKFLELVIPAIREG  303 (339)
Q Consensus       286 ---~~~~~~~l~~~~~~l~~g  303 (339)
                         ...|...+-.+++++-+.
T Consensus       316 ~~aS~LYa~Nl~~~l~ll~~~  336 (356)
T COG3288         316 AQASQLYATNLVNLLKLLCKK  336 (356)
T ss_pred             hhHHHHHHHHHHHHHHHHhcc
Confidence               223344455566655443

>PRK06849 hypothetical protein; Provisional

Probab=94.84  E-value=0.38  Score=44.27  Aligned_cols=95  Identities=13%  Similarity=0.082  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--ee--CCChhhHHHHHHHhCCC-CccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FN--YKEEPDLDAALKRCFPQ-GIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~--~~~~~~~~~~v~~~~~g-~~d~v  225 (339)
                      ...+|||+|+..+.|+.+++.++..|.+|++++..+......  +..+++.  +.  ..+.+.+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~--s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRF--SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH--HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            357899999988899999999999999999999876543322  1122322  21  11212567777777655 89999


Q ss_pred             EECCChh-hHHHHHHhhccCCEE
Q 037444          226 FENVGGK-MLDAVLLNMRLRGRI  247 (339)
Q Consensus       226 id~~g~~-~~~~~~~~l~~~G~~  247 (339)
                      |-+.... .+......+.++.++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAYCEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCCcEE
Confidence            9887643 333344556555443

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.82  E-value=0.47  Score=41.64  Aligned_cols=77  Identities=13%  Similarity=0.132  Sum_probs=46.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH---HHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK---EKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      .+.+++|.|+ |+.+.+++..+...|+ +++++.|+.   ++.+.+.+.++..  ..+..... +-.+.+.+. ...+|+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~-~~~aDi  199 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEA-LASADI  199 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhh-cccCCE
Confidence            5679999997 8889987776777888 899999884   3555554355421  01111110 101112211 126899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      |++|+.
T Consensus       200 vINaTp  205 (288)
T PRK12749        200 LTNGTK  205 (288)
T ss_pred             EEECCC
Confidence            999886

>PLN00198 anthocyanidin reductase; Provisional

Probab=94.80  E-value=0.2  Score=44.99  Aligned_cols=37  Identities=16%  Similarity=0.139  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .+.+|||+||+|-+|..+++.+...|++|++++++.+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~   44 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE   44 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            3678999999999999999998889999998887654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=94.80  E-value=0.078  Score=46.38  Aligned_cols=32  Identities=25%  Similarity=0.315  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      +|||+||+|.+|..+++.+...|.+|+++.++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~   32 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS   32 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence            48999999999999999998889999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.78  E-value=0.3  Score=42.08  Aligned_cols=95  Identities=19%  Similarity=0.141  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ......++.+||=.|.  +.|..+..+++.. +.+|+++..++.-.+.++ +.+.+ ++..    +..+ +  ...+.||
T Consensus        23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~-~~~~----d~~~-~--~~~~~fD   91 (255)
T PRK14103         23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVD-ARTG----DVRD-W--KPKPDTD   91 (255)
T ss_pred             HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCc-EEEc----Chhh-C--CCCCCce
Confidence            4456678899988884  5577888888875 679999999988888877 54443 2222    2211 1  1124799


Q ss_pred             EEEECCC-----h--hhHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVG-----G--KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g-----~--~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+....     .  ..+.++.+.|+++|+++..
T Consensus        92 ~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         92 VVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             EEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            9998543     1  2577888999999998764

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=94.77  E-value=0.15  Score=46.84  Aligned_cols=75  Identities=19%  Similarity=0.276  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          151 KGEYVYVSAA----------------SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       151 ~g~~vlI~ga----------------~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .|.++||+||                +|.+|.++++.+...|++|+.+.++.+ .+  . ..+. ..++..+..+..+.+
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~-~~~~-~~~dv~~~~~~~~~v  261 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--T-PAGV-KRIDVESAQEMLDAV  261 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--C-CCCc-EEEccCCHHHHHHHH
Confidence            6889999999                667999999999999999999987642 11  1 1122 234444433556666


Q ss_pred             HHhCCCCccEEEECCCh
Q 037444          215 KRCFPQGIDIYFENVGG  231 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~  231 (339)
                      .+.. +.+|++|.+.+-
T Consensus       262 ~~~~-~~~DilI~~Aav  277 (399)
T PRK05579        262 LAAL-PQADIFIMAAAV  277 (399)
T ss_pred             HHhc-CCCCEEEEcccc
Confidence            5443 369999999984

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=94.75  E-value=0.029  Score=39.66  Aligned_cols=82  Identities=21%  Similarity=0.275  Sum_probs=53.8

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEECCCh-------h
Q 037444          162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFENVGG-------K  232 (339)
Q Consensus       162 g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-------~  232 (339)
                      .+.|..+..+++.-+.+|+++..+++..+.+++......  +...+.. ++     .+.++.+|+|+....-       .
T Consensus         5 ~G~G~~~~~l~~~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~~~~~~~~~~~~~   78 (95)
T PF08241_consen    5 CGTGRFAAALAKRGGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAE-DL-----PFPDNSFDVVFSNSVLHHLEDPEA   78 (95)
T ss_dssp             -TTSHHHHHHHHTTTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTT-SS-----SS-TT-EEEEEEESHGGGSSHHHH
T ss_pred             CcCCHHHHHHHhccCCEEEEEeCCHHHHHHHHhcccccCchheeehHH-hC-----ccccccccccccccceeeccCHHH
Confidence            457888888888867799999999998888884333321  2222221 11     2223479999875431       2


Q ss_pred             hHHHHHHhhccCCEEEE
Q 037444          233 MLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       233 ~~~~~~~~l~~~G~~v~  249 (339)
                      .+.++.+.|+++|+++.
T Consensus        79 ~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   79 ALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             HHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHcCcCeEEeC
Confidence            67899999999999873

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.74  E-value=0.17  Score=42.01  Aligned_cols=91  Identities=22%  Similarity=0.165  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .|.+|||.|| |.+|..-++.+...|++|++++.... ....+. +.|--..+. ... . ...+     .++++||-+.
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~-~-~~dl-----~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCF-D-ADIL-----EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCC-C-HHHh-----CCcEEEEECC
Confidence            4679999997 99999999999999999999886543 223333 233211111 111 1 1111     3699999999


Q ss_pred             ChhhHH-HHHHhhccCCEEEEEe
Q 037444          230 GGKMLD-AVLLNMRLRGRIAVCG  251 (339)
Q Consensus       230 g~~~~~-~~~~~l~~~G~~v~~g  251 (339)
                      +.+.++ ......+..|.++.+.
T Consensus        78 ~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        78 DDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEC
Confidence            987554 4444445567776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.73  E-value=0.23  Score=39.33  Aligned_cols=97  Identities=16%  Similarity=0.085  Sum_probs=57.4

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++....+..|....---.|.+++|.|.+..+|.-+..++...|+.|+..-...+                     ++
T Consensus        15 ~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~---------------------~l   73 (160)
T PF02882_consen   15 FVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK---------------------NL   73 (160)
T ss_dssp             S--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS---------------------SH
T ss_pred             CcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC---------------------cc
Confidence            345554445555533222357899999999999999999999999999988543322                     22


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.++     ..|+|+-++|.+.+- --.+++++-.++++|...
T Consensus        74 ~~~~~-----~ADIVVsa~G~~~~i-~~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   74 QEITR-----RADIVVSAVGKPNLI-KADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             HHHHT-----TSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred             cceee-----eccEEeeeecccccc-ccccccCCcEEEecCCcc
Confidence            22222     378999999876432 235788888888888643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.70  E-value=0.24  Score=44.48  Aligned_cols=87  Identities=21%  Similarity=0.208  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|- |.+|..+++.++.+|.+|++..++.... ... ..+...    .   ++.+.+.     ..|+|+-++.
T Consensus       149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~----~---~l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAEY----R---PLEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCEe----c---CHHHHHh-----hCCEEEEeCC
Confidence            5789999995 9999999999999999999998765432 222 333311    1   2222222     2577777665


Q ss_pred             h-h----hH-HHHHHhhccCCEEEEEec
Q 037444          231 G-K----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      . +    .+ ...+..++++..++.++.
T Consensus       214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            2 1    11 245566666666666543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.70  E-value=0.15  Score=38.38  Aligned_cols=90  Identities=14%  Similarity=0.125  Sum_probs=51.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHH-HHHHHHHHhC----C-CeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKE-KVDLLKNKFG----F-DDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~-~~~~~~~~~g----~-~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +|.|+||+|-+|..+++++... .+++..+..+.. .-..+.+.++    . +-.+...+       ...+  ..+|+||
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~~~Dvvf   71 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD-------PEEL--SDVDVVF   71 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS-------GHHH--TTESEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc-------hhHh--hcCCEEE
Confidence            6899999999999999888765 566555544433 2222221221    1 11222211       1111  3699999


Q ss_pred             ECCChhhHHHHHHhh-ccCCEEEEEec
Q 037444          227 ENVGGKMLDAVLLNM-RLRGRIAVCGM  252 (339)
Q Consensus       227 d~~g~~~~~~~~~~l-~~~G~~v~~g~  252 (339)
                      .|.+.....+....+ ..+-++++.+.
T Consensus        72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~   98 (121)
T PF01118_consen   72 LALPHGASKELAPKLLKAGIKVIDLSG   98 (121)
T ss_dssp             E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred             ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence            999987555555555 55556666543

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=94.69  E-value=0.1  Score=46.19  Aligned_cols=73  Identities=12%  Similarity=0.084  Sum_probs=44.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeee-eCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAF-NYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      |||+||+|.+|..+++.+...|. +|+++.++.... .+. .++...+. +.++. +..+.+.+..-.++|+|+++.+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence            68999999999999999999998 788876543321 122 22221111 12222 3333333211147999999886

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.69  E-value=2.5  Score=36.20  Aligned_cols=99  Identities=17%  Similarity=0.156  Sum_probs=62.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccE
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      +.....++.+||-.|. | .|..+..+++ .|.+|+++..+++..+.+++......++..+-+ ++     ...++.+|+
T Consensus        36 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~-~~-----~~~~~~fD~  106 (251)
T PRK10258         36 AMLPQRKFTHVLDAGC-G-PGWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIE-SL-----PLATATFDL  106 (251)
T ss_pred             HhcCccCCCeEEEeeC-C-CCHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcc-cC-----cCCCCcEEE
Confidence            3334446788998885 3 3666655554 588999999999988888733222223322211 11     112237999


Q ss_pred             EEECCC-------hhhHHHHHHhhccCCEEEEEec
Q 037444          225 YFENVG-------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       225 vid~~g-------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+....       ...+.++.+.|+++|.++....
T Consensus       107 V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        107 AWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             EEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            997543       1267888999999999986543

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.65  E-value=0.17  Score=37.47  Aligned_cols=96  Identities=19%  Similarity=0.230  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      |.+||-.|  .+.|..++.+++....+++++..++...+.+++.+   +.+.-+..... |+.+.......+.+|+|+-.
T Consensus         1 g~~vlD~~--~G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~D~Iv~n   77 (117)
T PF13659_consen    1 GDRVLDPG--CGSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVG-DARDLPEPLPDGKFDLIVTN   77 (117)
T ss_dssp             TEEEEEET--STTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEES-HHHHHHHTCTTT-EEEEEE-
T ss_pred             CCEEEEcC--cchHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEEC-chhhchhhccCceeEEEEEC
Confidence            45666666  45666666666665579999999999888777432   22111222222 55444434444589999973


Q ss_pred             CC-h--------------hhHHHHHHhhccCCEEEEE
Q 037444          229 VG-G--------------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g-~--------------~~~~~~~~~l~~~G~~v~~  250 (339)
                      -. .              ..+..+.+.|+++|.++.+
T Consensus        78 pP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   78 PPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             -STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            32 1              1377899999999998865

...

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
4hfj_A	351	X-ray Crystal Structure Of A Double Bond Reductase		1e-140
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		1e-130
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		2e-56
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		4e-54
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		8e-53
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		8e-53
2w4q_A	357	Crystal Structure Of Human Zinc-Binding Alcohol Deh		7e-37
2zb4_A	357	Crystal Structure Of Human 15-Ketoprostaglandin Del		9e-37
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		8e-34
1vj1_A	363	Crystal Structure Of Putative Nadph-Dependent Oxido		3e-32
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-23
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-23
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-23
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		3e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		9e-09
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-08
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-08
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		3e-08
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		4e-07
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		8e-07
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		8e-06
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		3e-04
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		4e-04

>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351

Iteration: 1
 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/341 (72%), Positives = 285/341 (83%), Gaps = 9/341 (2%)
Query: 6   EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS 65
           E VSNK+VIL NYVTG+PKESDM+I + +IKLKV EGS D V++KNLYLSCDPYMR RM 
Sbjct: 3   EEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSND-VVVKNLYLSCDPYMRSRMR 61
Query: 66  KLDRPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTAPQLLIKI 118
           K++  S+V+SF PG     + +  +       + K DLVWG TGWEEYS++T  Q L KI
Sbjct: 62  KIEG-SYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120
Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
              DVPLSYYTGILGMPG+TAYAG +EVCSPKKGE V+VSAASGAVGQLVGQFAK+ GCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180
Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK+KFGFD+AFNYKEE DL AALKR FP GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240
Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           +NM+L GRIAVCGMISQYNLE+ EGVHNL  LI KRIR+EGFL  DYYHLYPK+LE+VIP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300
Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            I+ GK+VYVED+A GLE+AP ALVGLF+GRN+GKQ+V V+
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score =  461 bits (1187), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/341 (67%), Positives = 269/341 (78%), Gaps = 11/341 (3%)
Query: 9   SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           +NK+VIL +YV+GFP ESD   T+ +++L+V EG+ ++VL+KNLYLSCDPYMR RM K D
Sbjct: 4   TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMRIRMGKPD 62
Query: 69  --RPSFVDSFHPGE--LKFWILHI-----QNYAKDDLVWGSTGWEEYSLVTA-PQLLIKI 118
               +   ++ PG+    + +  I      +Y K DL+WG   WEEYS++T       KI
Sbjct: 63  PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
           QHTDVPLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQ AK+ GCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182
Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           VVGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP GIDIYFENVGGKMLDAVL
Sbjct: 183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVL 242
Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
           +NM + GRIAVCGMISQYNLE  EGVHNL  +I KR R++GF+  D+Y  Y KFLE V+P
Sbjct: 243 VNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLP 302
Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            IREGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V VA
Sbjct: 303 HIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 186/337 (55%), Gaps = 16/337 (4%)
Query: 10  NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR 69
           N++  L+   +G P       T   ++  + E ++  +L+KN YLS DP MR  M+  D 
Sbjct: 8   NRQYQLAQRPSGLPGRD----TFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMN--DA 61
Query: 70  PSFVDSFHPGEL-------KFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTD 122
            S++     GE+       K  +     +   D V G+ G ++Y  +  P+   K+  + 
Sbjct: 62  RSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDPSR 120
Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
            PL  Y   LGM G+TAY  L +V  PK GE V +S A+GAVG + GQ A+L GC VVG 
Sbjct: 121 APLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGI 180
Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AG  EK   L  + GFD A +YK E DL A LKR  P+GID++F+NVGG++LD VL  + 
Sbjct: 181 AGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIA 239
Query: 243 LRGRIAVCGMISQY-NLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIR 301
            + RI +CG ISQY N E   G  N   L+  R R+EG +  DY   +P+ L+ +   + 
Sbjct: 240 FKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLA 299
Query: 302 EGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
           EGK+   EDI EGLE  P  L+ LF+G N GK ++ V
Sbjct: 300 EGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 192/338 (56%), Gaps = 19/338 (5%)
Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSK 66
           V  K   L  +  G P +SD ++ +  +  LK  E     VLL+ L+LS DPYMR    +
Sbjct: 6   VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGE-----VLLEALFLSVDPYMRIASKR 60
Query: 67  LDRPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTD 122
           L   + +     G+    ++  +N A     +V   +GW  + +     L  L+      
Sbjct: 61  LKEGAVM----MGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDK 116
Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           +PLS   G +GMPG+TAY GL EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 117 LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 176
Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AGS EK+  LK + GFD AFNYK    L+ ALK+  P G D YF+NVGG+ L+ VL  M+
Sbjct: 177 AGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 235
Query: 243 LRGRIAVCGMISQYNL--EKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPA 299
             G+IA+CG IS YN   + P G  + E +I K++R+EGF+   +   +  K L  ++  
Sbjct: 236 DFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKW 294
Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA 337
           + EGK+ Y E + +G EN PAA + +  G N+GK +V 
Sbjct: 295 VLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 185/337 (54%), Gaps = 23/337 (6%)
Query: 10  NKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
            K   L  +  G+P  SD ++ +  +  LK  E     VLL+ L+L+ DPYMR    +L 
Sbjct: 24  TKTWTLKKHFVGYPTNSDFELKTSELPPLKNGE-----VLLEALFLTVDPYMRVAAKRLK 78
Query: 69  RPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVP 124
                D+   G+    ++  +N A  K  +V  S GW  +S+     L  L+      +P
Sbjct: 79  EG---DTMM-GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIP 134
Query: 125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
           LS   G +GMPG+TAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ G
Sbjct: 135 LSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVG 194
Query: 185 SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR 244
           S EKV  L+ K GFD  FNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  
Sbjct: 195 SDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKF 253
Query: 245 GRIAVCGMISQYN-LEKPEGVHNLEQLIGKRIRLEGFLA----GDYYHLYPKFLELVIPA 299
           GRIA+CG IS YN           E +I + +R+E F+     GD      K L+ ++  
Sbjct: 254 GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKW 310
Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           + EGK+ Y E I EG EN PAA +G+  G N+GK +V
Sbjct: 311 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 185/337 (54%), Gaps = 23/337 (6%)
Query: 10  NKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
            K   L  +  G+P  SD ++ +  +  LK  E     VLL+ L+L+ DPYMR    +L 
Sbjct: 3   TKTWTLKKHFVGYPTNSDFELKTSELPPLKNGE-----VLLEALFLTVDPYMRVAAKRLK 57
Query: 69  RPSFVDSFHPGELKFWILHIQNYA--KDDLVWGSTGWEEYSLVTAPQL--LIKIQHTDVP 124
                D+   G+    ++  +N A  K  +V  S GW  +S+     L  L+      +P
Sbjct: 58  EG---DTMM-GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIP 113
Query: 125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
           LS   G +GMPG+TAY GL E+C  K GE V V+AA+GAVG +VGQ AKL GC VVG+ G
Sbjct: 114 LSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVG 173
Query: 185 SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR 244
           S EKV  L+ K GFD  FNYK    L+  LK+  P G D YF+NVGG+  + V+  M+  
Sbjct: 174 SDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKF 232
Query: 245 GRIAVCGMISQYN-LEKPEGVHNLEQLIGKRIRLEGFLA----GDYYHLYPKFLELVIPA 299
           GRIA+CG IS YN           E +I + +R+E F+     GD      K L+ ++  
Sbjct: 233 GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKW 289
Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
           + EGK+ Y E I EG EN PAA +G+  G N+GK +V
Sbjct: 290 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326

>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357

Iteration: 1
 Score =  150 bits (380), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 176/353 (49%), Gaps = 34/353 (9%)
Query: 11  KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           +RV+L++     G P   + ++    +   + EG    V ++ LYLS DPYMR RM++  
Sbjct: 5   QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDT 61
Query: 69  RPSFVDSFHPGEL----KFWILHIQ---NYAKDDLV----WGSTGWEEYSLVTAPQL-LI 116
              ++  +   ++       I+      N  K D V    W    W+   ++    L  +
Sbjct: 62  GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWP---WQTKVILDGNSLEKV 118
Query: 117 KIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKL 174
             Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ    
Sbjct: 119 DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF 178
Query: 175 AGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM 233
            GC  VVG  G+ EK  LL ++ GFD A NYK++ ++   L+   P G+D+YF+NVGG +
Sbjct: 179 LGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNI 237
Query: 234 LDAVLLNMRLRGRIAVCGMISQYNLEKP------EGVHNLEQLIGKRIRLEGFLAGDYYH 287
            D V+  M     I +CG ISQYN + P        +  +++   + I  E FL  +Y  
Sbjct: 238 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--ERNITRERFLVLNYKD 295
Query: 288 LY-PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            + P  L+L     +EGK+   E +  GLEN  AA   + TG N+GKQ+V ++
Sbjct: 296 KFEPGILQLS-QWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS 347

>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357

Iteration: 1
 Score =  150 bits (379), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 176/353 (49%), Gaps = 34/353 (9%)
Query: 11  KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           +RV+L++     G P   + ++    +   + EG    V ++ LYLS DPYMR RM++  
Sbjct: 10  QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDT 66
Query: 69  RPSFVDSFHPGEL----KFWILHIQ---NYAKDDLV----WGSTGWEEYSLVTAPQL-LI 116
              ++  +   ++       I+      N  K D V    W    W+   ++    L  +
Sbjct: 67  GTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWP---WQTKVILDGNSLEKV 123
Query: 117 KIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKL 174
             Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G + GQ    
Sbjct: 124 DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF 183
Query: 175 AGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM 233
            GC  VVG  G+ EK  LL ++ GFD A NYK++ ++   L+   P G+D+YF+NVGG +
Sbjct: 184 LGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNI 242
Query: 234 LDAVLLNMRLRGRIAVCGMISQYNLEKP------EGVHNLEQLIGKRIRLEGFLAGDYYH 287
            D V+  M     I +CG ISQYN + P        +  +++   + I  E FL  +Y  
Sbjct: 243 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--ERNITRERFLVLNYKD 300
Query: 288 LY-PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            + P  L+L     +EGK+   E +  GLEN  AA   + TG N+GKQ+V ++
Sbjct: 301 KFEPGILQLS-QWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS 352

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score =  140 bits (354), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 161/313 (51%), Gaps = 25/313 (7%)
Query: 47  VLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELK----FWILH---IQNYAKDDLV-- 97
           V ++ LYLS DPYMR +M++     ++  +   ++       ++     Q   K D V  
Sbjct: 41  VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTS 100
Query: 98  --WGSTGWEEYSLVTAPQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKG 152
             W    W+  +++    L  +  Q  D  LSY+ G +GMPG+T+  G+ E    S    
Sbjct: 101 FYWP---WQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSN 157
Query: 153 EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD 211
           + + VS A+GA G L GQ   L GC  VVG  G++EK   L ++ GFD A NYK   ++ 
Sbjct: 158 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVA 216
Query: 212 AALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLE---KPEGVHNLE 268
             L+   P G+D+YF+NVGG + +AV+  M     I +CG ISQY+ +    P     +E
Sbjct: 217 EQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVE 276
Query: 269 QLIGKR-IRLEGFLAGDYYHLY-PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLF 326
            +  +R I  E F   +Y   + P  L+L     +EGK+   E +A+GLEN   A   + 
Sbjct: 277 AIRKERNITRERFTVLNYKDKFEPGILQLS-QWFKEGKLKVKETMAKGLENMGVAFQSMM 335
Query: 327 TGRNVGKQLVAVA 339
           TG NVGKQ+V ++
Sbjct: 336 TGGNVGKQIVCIS 348

>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363

Iteration: 1
 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 171/354 (48%), Gaps = 36/354 (10%)
Query: 11  KRVILSNY--VTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD 68
           +RV+L++     G P   + ++   S+   + EG    V ++ LYLS DPY R    K +
Sbjct: 16  QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQ---VQVRTLYLSVDPYXR---CKXN 69
Query: 69  RPSFVDSFHPGELK-------FWILH---IQNYAKDDLV----WGSTGWEEYSLVTAPQL 114
             +  D   P +L          I+     Q  AK D V    W    W+  +++    L
Sbjct: 70  EDTGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWP---WQTKAILDGNGL 126
Query: 115 -LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQF 171
             +  Q  D  LSY+ G +G PG+T+  G+ E    S    +   VS A+GA G L GQ 
Sbjct: 127 EKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQI 186
Query: 172 AKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG 230
             L GC  VVG  G++EK   L ++ GFD A NYK   ++   L+   P G+D+YF+NVG
Sbjct: 187 GHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVG 245
Query: 231 GKMLDAVLLNMRLRGRIAVCGMISQYNLE---KPEGVHNLEQLIGKR-IRLEGFLAGDYY 286
           G + + V+        I +CG ISQYN +    P     +E +  +R I  E F   +Y 
Sbjct: 246 GDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYK 305
Query: 287 HLY-PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
             + P  L+L     +EGK+   E +A+GLEN   A     TG NVGKQ+V ++
Sbjct: 306 DKFEPGILQLS-QWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCIS 358

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 23/248 (9%)
Query: 103 WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG 162
           + EY++V A    I      V   Y T  L + G TAY  L E+    +G+ V V+AA+G
Sbjct: 128 FAEYTVVPAS---IATPVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAG 182
Query: 163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGI 222
             GQ   Q +K A C+V+G+  S EK   LK+  G D   NYK EP +   LK+ +P+G+
Sbjct: 183 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 240
Query: 223 DIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIR 276
           D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   
Sbjct: 241 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKKSAS 298
Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE--------GLENAPAALVGLFTG 328
           ++GF    Y   Y   +  ++     G +V   D+ +        GLE+   A+  ++ G
Sbjct: 299 VQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMG 358
Query: 329 RNVGKQLV 336
           +N GK +V
Sbjct: 359 KNTGKIVV 366

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 23/248 (9%)
Query: 103 WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG 162
           + EY++V A    I      V   Y T  L + G TAY  L E+    +G+ V V+AA+G
Sbjct: 120 FAEYTVVPAS---IATPVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAG 174
Query: 163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGI 222
             GQ   Q +K A C+V+G+  S EK   LK+  G D   NYK EP +   LK+ +P+G+
Sbjct: 175 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 232
Query: 223 DIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIR 276
           D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   
Sbjct: 233 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKKSAS 290
Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE--------GLENAPAALVGLFTG 328
           ++GF    Y   Y   +  ++     G +V   D+ +        GLE+   A+  ++ G
Sbjct: 291 VQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMG 350
Query: 329 RNVGKQLV 336
           +N GK +V
Sbjct: 351 KNTGKIVV 358

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 23/248 (9%)
Query: 103 WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG 162
           + EY++V A    I      V   Y T  L + G TAY  L E+    +G+ V V+AA+G
Sbjct: 99  FAEYTVVPAS---IATPVPSVKPEYLT--LLVSGTTAYISLKELGGLSEGKKVLVTAAAG 153
Query: 163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGI 222
             GQ   Q +K A C+V+G+  S EK   LK+  G D   NYK EP +   LK+ +P+G+
Sbjct: 154 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 211
Query: 223 DIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE------QLIGKRIR 276
           D+ +E+VGG M D  +  +  +GR+ V G IS Y  + P G+  ++      +L+ K   
Sbjct: 212 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKKSAS 269
Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE--------GLENAPAALVGLFTG 328
           ++GF    Y   Y   +  ++     G +V   D+ +        GLE+   A+  ++ G
Sbjct: 270 VQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMG 329
Query: 329 RNVGKQLV 336
           +N GK +V
Sbjct: 330 KNTGKIVV 337

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 12/167 (7%)
Query: 91  YAKDDLVWGST----GWEEYSLVTAPQLLIKIQHTDVPLSYYTGI-LGMPGVTAYAGLYE 145
           + K D V+ S+    G+ EY+L  A   + K+      L +  G  +G+P  TAY  L  
Sbjct: 109 FKKGDRVFTSSTISGGYAEYAL-AADHTVYKLPEK---LDFKQGAAIGIPYFTAYRALIH 164
Query: 146 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL-LKNKFGFDDAFNY 204
               K GE V V  ASG VG    Q A+  G  ++G+AG++E   + L+N  G  + FN+
Sbjct: 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHEVFNH 222
Query: 205 KEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           +E   +D   K    +GIDI  E +    L   L  +   GR+ V G
Sbjct: 223 REVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 11/220 (5%)
Query: 43  SKDTVLLKNLYLSCD---PYMRWRMSKLDRPSFVDSFHPGELKFWILHIQNYAKDDLV-- 97
           S++ +L+KN Y   +    Y R  +   ++P  +     G +      + N+   D V  
Sbjct: 34  SEEELLIKNKYTGVNYIESYFRKGIYPCEKPYVLGREASGTVVAKGKGVTNFEVGDQVAY 93
Query: 98  WGSTGWEEYSLVTAPQLLIKIQH--TDVPLSYYT-GILGMPGVTAYAGLYEVCSPKKGEY 154
             ++ + +YS +++   ++K+    +D  L  Y  G+L +  +TA +   E    KKG+Y
Sbjct: 94  ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQV--LTALSFTNEAYHVKKGDY 151
Query: 155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL 214
           V + AA+G VG ++ Q  K+ G + +  A + EK+ + K ++G +   N  +E  L   L
Sbjct: 152 VLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKEDILRQVL 210
Query: 215 KRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
           K    +G+D  F++VG    +  L  ++ +G     G  S
Sbjct: 211 KFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS 250

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 103 WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG 162
           + +  L  A +L+   +  D+   +  G++ + G+TA   L++    K G+YV + AA+G
Sbjct: 98  YSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAG 156
Query: 163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGI 222
            +G ++  +A+  G  V+G+  ++EK +  + K G     NY  +   +   +    +G+
Sbjct: 157 GMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGV 215
Query: 223 DIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
           D+ ++++G   L   L  +R RG  A  G  S
Sbjct: 216 DVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 108 LVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQL 167
           L+  P+ L   Q   +P ++         +TA+  L+ V + + G+YV + A    VG  
Sbjct: 128 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 178
Query: 168 VGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE 227
             Q  ++AG   + +AGS++K+ + + K G    FNYK+E   +A LK     G+++  +
Sbjct: 179 AIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKEDFSEATLKFTKGAGVNLILD 237
Query: 228 NVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 261
            +GG   +  +  + L GR  + G++   ++  P
Sbjct: 238 CIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 108 LVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQL 167
           L+  P+ L   Q   +P ++         +TA+  L+ V + + G+YV + A    VG  
Sbjct: 112 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 162
Query: 168 VGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE 227
             Q  ++AG   + +AGS++K+ + + K G    FNYK+E   +A LK     G+++  +
Sbjct: 163 AIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKEDFSEATLKFTKGAGVNLILD 221
Query: 228 NVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP 261
            +GG   +  +  + L GR  + G++   ++  P
Sbjct: 222 CIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 88  IQNYAKDDLVWG---STGWEEYSLVTAPQLLI------KIQHTDVPLSYYTGILGMPGVT 138
           +  YA  D V G      + EY L+ A Q+L        ++   +P +++T         
Sbjct: 104 VSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT--------- 154
Query: 139 AYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF 198
            +A L++     +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + G 
Sbjct: 155 VWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGA 213
Query: 199 DDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNL 258
               NY+ E D  A +K    QG+DI  + +G    +  + ++   G +++   +     
Sbjct: 214 KRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVA 272
Query: 259 EKPEGVHNLEQLIGKRIRLEG 279
           EK     NL  +  KR+ + G
Sbjct: 273 EK----VNLSPIXVKRLTVTG 289

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 105 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAV 164
           E +L   P+ L   +   +PL++         +TA+  + +    + G+ V V AA   V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 165 GQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF-PQGID 223
                Q AKL G  V+ +AGS++K+   K   G D+  NY   PD    ++R    +G D
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYT-HPDWPKEVRRLTGGKGAD 237
Query: 224 IYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG 283
              ++ G    + V+      GRIA+ G  S Y     EG      +  +++ + G    
Sbjct: 238 KVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMA 292
Query: 284 DYYHLYP--KFLE--LVIPAIREGKMVYVEDIAEG 314
               L+P  +F+E   + P +  G+++ +E  AEG
Sbjct: 293 SKSRLFPILRFVEEGKLKPVV--GQVLPLEAAAEG 325

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS 161
           GW     V AP+ L   + + +P +         G+TA+  L E    + G+ V V   +
Sbjct: 153 GW----FVAAPKSLDAAEASTLPCA---------GLTAWFALVEKGHLRAGDRVVVQG-T 198
Query: 162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQG 221
           G V     Q AK  G  V+ ++ S+EK+D      G D   N  EE  ++        +G
Sbjct: 199 GGVALFGLQIAKATGAEVIVTSSSREKLDR-AFALGADHGINRLEEDWVERVYALTGDRG 257
Query: 222 IDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEG 263
            D   E  GG  L   L  +   GRI+V G++  + +  P G
Sbjct: 258 ADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVG 299

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK 193
           M  VTAY  L+EV + ++G  V V +A G VGQ V Q         V    S  K + +K
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK 184
Query: 194 NKFG--FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG 231
           +     FD   +Y +E      +KR   +G+DI  + + G
Sbjct: 185 DSVTHLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 137  VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF 196
             TAY  L      + GE V + + SG VGQ     A   GC V  + GS EK   L+ +F
Sbjct: 1653 TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF 1712
Query: 197  GFDDAFNYKEEPDLDAALKRCFPQGIDIYFE-----NVGGKMLDAVL 238
                       P LD   + CF    D  FE     +  GK +D VL
Sbjct: 1713 -----------PQLD---ETCFANSRDTSFEQHVLRHTAGKGVDLVL 1745

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	0.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-167
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-159
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	8e-93
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	4e-29
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	5e-26
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	5e-26
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	4e-25
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	7e-24
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-23
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-23
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	8e-23
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-22
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	4e-22
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-20
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	3e-20
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	3e-19
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	4e-19
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	6e-19
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-18
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-17
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	5e-16
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-15
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	3e-15
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-15
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-13
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	4e-12
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-10
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	5e-10
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	9e-10
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	9e-10
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	1e-09
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-09
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-09
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-09
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-09
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-09
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-08
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	4e-08
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	5e-08
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	9e-08
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-07
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	6e-07
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	5e-06
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	8e-06
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	2e-05
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-05

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score =  515 bits (1328), Expect = 0.0
 Identities = 230/349 (65%), Positives = 266/349 (76%), Gaps = 23/349 (6%)

Query: 7   AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK 66
             +NK+VIL +YV+GFP ESD   T+ +++L+V EG+   VL+KNLYLSCDPYMR RM K
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNS-VLVKNLYLSCDPYMRIRMGK 60

Query: 67  LDR--PSFVDSFHPGELKFWILHIQ-------------NYAKDDLVWGSTGWEEYSLVTA 111
            D    +   ++ PG+       IQ             +Y K DL+WG   WEEYS++T 
Sbjct: 61  PDPSTAALAQAYTPGQP------IQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITP 114

Query: 112 PQL-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQ 170
                 KIQHTDVPLSYYTG+LGMPG+TAYAG YEVCSPK+GE VYVSAASGAVGQLVGQ
Sbjct: 115 MTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQ 174

Query: 171 FAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG 230
            AK+ GCYVVGSAGSKEKVDLLK KFGFDDAFNYKEE DL AALKRCFP GIDIYFENVG
Sbjct: 175 LAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234

Query: 231 GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP 290
           GKMLDAVL+NM + GRIAVCGMISQYNLE  EGVHNL  +I KR R++GF+  D+Y  Y 
Sbjct: 235 GKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYS 294

Query: 291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           KFLE V+P IREGK+ YVED+A+GLE AP ALVGLF G+NVGKQ+V VA
Sbjct: 295 KFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVA 343

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score =  467 bits (1204), Expect = e-167
 Identities = 131/347 (37%), Positives = 185/347 (53%), Gaps = 29/347 (8%)

Query: 3   AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW 62
           + +  V  K   L  +  G P +SD ++ +  +           VLL+ L+LS DPYMR 
Sbjct: 1   SPEFMVKAKSWTLKKHFQGKPTQSDFELKTVEL----PPLKNGEVLLEALFLSVDPYMRI 56

Query: 63  RMS--KLDRP-------SFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQ 113
                K             V+S +             +    +V   +GW  + +     
Sbjct: 57  ASKRLKEGAVMMGQQVARVVESKNS-----------AFPAGSIVLAQSGWTTHFISDGKG 105

Query: 114 L--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQF 171
           L  L+      +PLS   G +GMPG+TAY GL EVC  K GE V VSAA+GAVG +VGQ 
Sbjct: 106 LEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQI 165

Query: 172 AKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG 231
           AKL GC VVG+AGS EK+  LK + GFD AFNYK    L+ ALK+  P G D YF+NVGG
Sbjct: 166 AKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224

Query: 232 KMLDAVLLNMRLRGRIAVCGMISQYNL-EKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLY 289
           + L+ VL  M+  G+IA+CG IS YN  ++     + E +I K++R+EGF+   +   + 
Sbjct: 225 EFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVR 284

Query: 290 PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLV 336
            K L  ++  + EGK+ Y E + +G EN PAA + +  G N+GK +V
Sbjct: 285 EKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score =  449 bits (1157), Expect = e-159
 Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 34/362 (9%)

Query: 2   AAEQEAVSNKRVILSN--YVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPY 59
           AA   A+  +RV+L++     G P   + ++    +   + EG    V ++ LYLS DPY
Sbjct: 1   AAAAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPY 57

Query: 60  MRWRMSKLDRPSFVDSFHPGELKFWILHIQ-------------NYAKDDLVWGST-GWEE 105
           MR RM++     ++  +   ++      +              N  K D V      W+ 
Sbjct: 58  MRCRMNEDTGTDYITPWQLSQV------VDGGGIGIIEESKHTNLTKGDFVTSFYWPWQT 111

Query: 106 YSLVTAPQLL-IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASG 162
             ++    L  +  Q  D  LSY+ G +GMPG+T+  G+ E      G  + + VS A+G
Sbjct: 112 KVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAG 171

Query: 163 AVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQG 221
           A G + GQ     GC  VVG  G+ EK  LL ++ GFD A NYK++ ++   L+   P G
Sbjct: 172 ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAG 230

Query: 222 IDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV----HNLEQLIGKRIRL 277
           +D+YF+NVGG + D V+  M     I +CG ISQYN + P               + I  
Sbjct: 231 VDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITR 290

Query: 278 EGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVA 337
           E FL  +Y   +   +  +    +EGK+   E +  GLEN  AA   + TG N+GKQ+V 
Sbjct: 291 ERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVC 350

Query: 338 VA 339
           ++
Sbjct: 351 IS 352

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  279 bits (717), Expect = 8e-93
 Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 27/313 (8%)

Query: 47  VLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGE------LKFWILHIQNYAKDDLV--W 98
           +L++N ++  +       +    PS    F  G       +   +     Y     V   
Sbjct: 56  LLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYM 115

Query: 99  GSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
               + EY++V A      +         Y   L + G TAY  L E+    +G+ V V+
Sbjct: 116 APGSFAEYTVVPASIAT-PV---PSVKPEYLT-LLVSGTTAYISLKELGGLSEGKKVLVT 170

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF 218
           AA+G  GQ   Q +K A C+V+G+  S EK   LK   G D   NYK E  +   LK+ +
Sbjct: 171 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEY 228

Query: 219 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN----LEKPEGVHNLEQLIGKR 274
           P+G+D+ +E+VGG M D  +  +  +GR+ V G IS Y     L   +      +L+ K 
Sbjct: 229 PEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKS 288

Query: 275 IRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIA--------EGLENAPAALVGLF 326
             ++GF    Y   Y   +  ++     G +V   D+          GLE+   A+  ++
Sbjct: 289 ASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMY 348

Query: 327 TGRNVGKQLVAVA 339
            G+N GK +V + 
Sbjct: 349 MGKNTGKIVVELP 361

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  113 bits (286), Expect = 4e-29
 Identities = 43/240 (17%), Positives = 87/240 (36%), Gaps = 22/240 (9%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
            W EY++  A   +       +   +    G  + +  +TA A ++++   +  +   ++
Sbjct: 119 SWAEYAVAEAAACI------PLLDTVRDEDGAAMIVNPLTAIA-MFDIVKQEGEKAFVMT 171

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR-C 217
           A +  + +L+   AK  G   + +    E++ LLK   G     N K   D +A L+   
Sbjct: 172 AGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVM 229

Query: 218 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
             +   I+ + V G +  A+   M  R R  + G +          +    QLI +   +
Sbjct: 230 KAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLD----PDATVIREPGQLIFQHKHI 285

Query: 278 EGFLAGDYYHLYP----KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGK 333
           EGF   ++   +       +        +G+          L  A A +      +  GK
Sbjct: 286 EGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVP-AELTKPNGK 344

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  105 bits (264), Expect = 5e-26
 Identities = 61/277 (22%), Positives = 103/277 (37%), Gaps = 21/277 (7%)

Query: 68  DRPSFVDSFHPGELKFWILHIQNYAKDDLVWGST---GWEEYSLVTAPQLLIKIQHTDVP 124
           D          G  +  +    N      + G      + EY ++    L  K ++    
Sbjct: 83  DEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKN---- 138

Query: 125 LSYYT-GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA 183
           LS+     + +  +TA+  + +    + G+ V V AA   V     Q AKL G  V+ +A
Sbjct: 139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATA 198

Query: 184 GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMR 242
           GS++K+   K   G D+  NY   PD    ++R    +G D   ++ G    + V+    
Sbjct: 199 GSEDKLRRAK-ALGADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATA 256

Query: 243 LRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIRE 302
             GRIA+ G  S Y             +  +++ + G             L  ++  + E
Sbjct: 257 NGGRIAIAGASSGYEGTL-----PFAHVFYRQLSILGSTMAS-----KSRLFPILRFVEE 306

Query: 303 GKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
           GK+  V      LE A      L   R  GK ++ V 
Sbjct: 307 GKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  105 bits (264), Expect = 5e-26
 Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 11/206 (5%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           T +A L+++    +GE V +   +  +G    Q A+  G  V  +AGS  K +  + + G
Sbjct: 154 TVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG 212

Query: 198 FDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYN 257
                NY+ E D  A +K    QG+DI  + +G    +  + ++   G +++   +    
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFERNIASLAKDGCLSIIAFLGGA- 270

Query: 258 LEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP-----KFLELVIPAIREGKMVYVEDIA 312
               E V NL  ++ KR+ + G                  L  V P +  G +  V    
Sbjct: 271 --VAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKV 327

Query: 313 EGLENAPAALVGLFTGRNVGKQLVAV 338
              E+   A   L  G +VGK ++ V
Sbjct: 328 FAFEDVADAHRLLEEGSHVGKVMLTV 353

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  103 bits (258), Expect = 4e-25
 Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 22/248 (8%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
            W   ++ +   L+       VP  +   +   LG+   TAY  L +    + G+ V  +
Sbjct: 121 TWRTEAVFSEEALIQ------VPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 174

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALK 215
           A++  VGQ V Q A   G   +     +  +  L +     G +     +E    +    
Sbjct: 175 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 234

Query: 216 RCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRI 275
                   +    VGGK    +L  +   G +   G +++  +        +  LI K +
Sbjct: 235 FKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVAS-----VSLLIFKDL 289

Query: 276 RLEGFLAGDYYHLYP-----KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRN 330
           +L GF    +   +      + +  +   IR G++         L++  +AL        
Sbjct: 290 KLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFI 349

Query: 331 VGKQLVAV 338
             KQ++ +
Sbjct: 350 SSKQILTM 357

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  100 bits (251), Expect = 7e-24
 Identities = 58/254 (22%), Positives = 83/254 (32%), Gaps = 35/254 (13%)

Query: 105 EYSLVTAPQLLIKIQHTDVPLSYYT-GILGMPGVTAYAGLYEVCSP--KKGEYVYVSAAS 161
           EY +V A QLL K  H    L++    +  +   TAY  L        K+G+ V +  AS
Sbjct: 175 EYGVVRASQLLPKPAH----LTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGAS 230

Query: 162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP-- 219
           G +G    QF K  G   V    S +K   ++   G D   N  E    D          
Sbjct: 231 GGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGITDDIADDPRRVV 289

Query: 220 ---------------QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV 264
                          +  DI FE+ G       ++  R  G +  CG  S Y        
Sbjct: 290 ETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHT----- 344

Query: 265 HNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVG 324
            +   L  K  ++ G    ++        +        G +V        L  A  A   
Sbjct: 345 FDNRYLWMKLKKIVGSHGANHEE-----QQATNRLFESGAVVPAMSAVYPLAEAAEACRV 399

Query: 325 LFTGRNVGKQLVAV 338
           + T R VGK  V  
Sbjct: 400 VQTSRQVGKVAVLC 413

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 99.1 bits (247), Expect = 2e-23
 Identities = 55/254 (21%), Positives = 85/254 (33%), Gaps = 35/254 (13%)

Query: 105 EYSLVTAPQLLIKIQHTDVPLSYYT-GILGMPGVTAYAGLYEVCS--PKKGEYVYVSAAS 161
           E +LV + QL+ K  H    LS+      G+   TAY  L        K+G+ V +  AS
Sbjct: 183 EIALVKSNQLMPKPDH----LSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGAS 238

Query: 162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE-------------- 207
           G +G    QFA   G   +    S +K ++ +   G +   +   E              
Sbjct: 239 GGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAEGYRFWKDENTQDPK 297

Query: 208 --PDLDAALKRCF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV 264
                   ++     + IDI FE+ G +   A +   R  G I  C   S Y  E     
Sbjct: 298 EWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYD--- 354

Query: 265 HNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVG 324
                L     R+ G    +Y              I +G++         LE+   A   
Sbjct: 355 --NRYLWMSLKRIIGSHFANYRE-----AWEANRLIAKGRIHPTLSKVYSLEDTGQAAYD 407

Query: 325 LFTGRNVGKQLVAV 338
           +    + GK  V  
Sbjct: 408 VHRNLHQGKVGVLC 421

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 97.7 bits (244), Expect = 2e-23
 Identities = 53/252 (21%), Positives = 87/252 (34%), Gaps = 30/252 (11%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
            W E        +        +P  +S+       M  VTAY  L+EV + ++G  V V 
Sbjct: 96  AWAEVVCTPVEFVY------KIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVH 149

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF 218
           +A G VGQ V Q         V    S  K + +K+       F+     D    +KR  
Sbjct: 150 SAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKD--SVTHLFDRNA--DYVQEVKRIS 205

Query: 219 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVH-----------NL 267
            +G+DI  + + G      L  ++  G   + G  +    E                 N 
Sbjct: 206 AEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP 265

Query: 268 EQLIGKRIRLEGFLAGDYYHLYPK------FLELVIPAIREGKMVYVEDIAEGLENAPAA 321
            +L  +   + GF   +      +       +E +I    + K+  V D    LE    A
Sbjct: 266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEA 325

Query: 322 LVGLFTGRNVGK 333
           +  +    N+GK
Sbjct: 326 MQRIHDRGNIGK 337

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score = 97.3 bits (243), Expect = 5e-23
 Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L   G+TA+  L E    + G+ V V    G V     Q AK  G  V+ ++ S+EK+D 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAKATGAEVIVTSSSREKLDR 228

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGRIAVC 250
                G D   N   E D    +      +G D   E  GG  L   L  +   GRI+V 
Sbjct: 229 AF-ALGADHGINRL-EEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVI 286

Query: 251 GMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVED 310
           G++  + +  P     +  L+ K   ++G   G         LE ++ A+    +  V D
Sbjct: 287 GVLEGFEVSGP-----VGPLLLKSPVVQGISVGHRRA-----LEDLVGAVDRLGLKPVID 336

Query: 311 IAEGLENAPAALVGLFTGRNVGK 333
           +       P AL  L  G   GK
Sbjct: 337 MRYKFTEVPEALAHLDRG-PFGK 358

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 96.7 bits (241), Expect = 8e-23
 Identities = 42/263 (15%), Positives = 74/263 (28%), Gaps = 31/263 (11%)

Query: 99  GSTGWEEYSLVTAPQLL-IKIQHTDVPLSYYTGI-------LGMPGVTAYAGLYEVCSPK 150
               W  ++L      + +             G+       + +  +TAY  L       
Sbjct: 106 NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLT 165

Query: 151 KGE-YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKNKFGFDDAFNYK 205
            G+ +   +  + AVG+   Q  KL     +     +    E V  LK + G        
Sbjct: 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITED 224

Query: 206 EE--PDLDAALK---RCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEK 260
           +    +    +K   +       +    VGGK    +   +   G +   G +S      
Sbjct: 225 QNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS-----F 279

Query: 261 PEGVHNLEQLIGKRIRLEGFLAGDYYHLYP----KFLELVIPAIREGKMVYVEDIA---E 313
                     I K     GF   +            L  +I    EGK+   + I    +
Sbjct: 280 QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYD 339

Query: 314 GLENAPAALVGLFTGRNVGKQLV 336
           G +               GKQL+
Sbjct: 340 GTKPLHELYQDGVANSKDGKQLI 362

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 95.0 bits (237), Expect = 3e-22
 Identities = 50/240 (20%), Positives = 80/240 (33%), Gaps = 23/240 (9%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
           G+ E   V    +L        P  L       L     T Y         + GE V V 
Sbjct: 113 GYAERVAVAPSNILP------TPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVL 166

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR-C 217
            A+G +G    Q AK  G  V+         + +K   G D     +E      A++   
Sbjct: 167 GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLEE--GWAKAVREAT 223

Query: 218 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
              G+D+  + +GG   D  +  +   GR+ V G  +      P     + +L+ +   L
Sbjct: 224 GGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVGFAAG---GIPT--IKVNRLLLRNASL 278

Query: 278 EGFLAGDYYHLYPKFL----ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGK 333
            G   G++   +  +L      +   + EG    V      L     AL     G+  GK
Sbjct: 279 IGVAWGEFLRTHADYLYETQAGLEKLVAEGMRPPVSARI-PLSEGRQALQDFADGKVYGK 337

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 94.2 bits (235), Expect = 4e-22
 Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)

Query: 138 TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG 197
           TA+  L+ V + + G+YV + A    VG    Q  ++AG   + +AGS++K+ + + K G
Sbjct: 149 TAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLG 207

Query: 198 FDDAFNYKEEPDLDAALKRCF-PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQY 256
               FNYK+E D   A  +     G+++  + +GG   +  +  + L GR  + G++   
Sbjct: 208 AAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266

Query: 257 NLEKPEGVHNLEQLIGKRIRLEGFL-----AGDYYHLYPKFLELVIPAIR---EGKMVYV 308
           ++  P       +L+ KR  L   L           L   F E ++P        +++ V
Sbjct: 267 DINGP----LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPV 322

Query: 309 EDIAEGLENAPAALVGLFTGRNVGK 333
            D    +     A   +   +N+GK
Sbjct: 323 LDRIYPVTEIQEAHKYMEANKNIGK 347

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 35/249 (14%), Positives = 93/249 (37%), Gaps = 27/249 (10%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
            W+EY   +A  ++       +P  +  +T   + +  +TA+    E  + ++ + + V+
Sbjct: 98  TWQEYVKTSADFVV------PIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVN 151

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR-C 217
           A   A+G L  Q +++    ++    + +  + L  + G     +      L   +    
Sbjct: 152 ACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELT 209

Query: 218 FPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
              G D   +++GG   + +  ++R  G     G++S       + V+  E +   ++  
Sbjct: 210 NGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS-----GIQ-VNWAEIVTKAKVHA 263

Query: 278 EGFLAGDYYHLYP-----KFLELVIPAIREGKMVYVEDIAE--GLENAPAALVGLFTGR- 329
             F    +          +    +I  +   ++ +++ +     L +  AA+  + +   
Sbjct: 264 NIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEK 322

Query: 330 NVGKQLVAV 338
             GK  +  
Sbjct: 323 TKGKVFLTS 331

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 90.3 bits (225), Expect = 1e-20
 Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 21/235 (8%)

Query: 105 EYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS 161
           EY+L     +        +P  L +  G  +G+P  TAY  L      K GE V V  AS
Sbjct: 127 EYALAADHTVY------KLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGAS 180

Query: 162 GAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR-CFPQ 220
           G VG    Q A+  G  ++G+AG++E   ++  + G  + FN++E  +    +K+    +
Sbjct: 181 GGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEK 238

Query: 221 GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF 280
           GIDI  E +    L   L  +   GR+ V G      +       N    + K   + G 
Sbjct: 239 GIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI-------NPRDTMAKESSIIGV 291

Query: 281 LAGDYYHLYPK-FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGR-NVGK 333
                     + +   +   +  G +  V      LE    A   +  G    GK
Sbjct: 292 TLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGK 346

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 88.8 bits (221), Expect = 3e-20
 Identities = 51/240 (21%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 105 EYSLVTAPQLLIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASG 162
           +YS +++   ++K+    +D  L  Y   L +  +TA +   E    KKG+YV + AA+G
Sbjct: 101 QYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNEAYHVKKGDYVLLFAAAG 159

Query: 163 AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF-PQG 221
            VG ++ Q  K+ G + +  A + EK+ + K ++G +   N  +E D+   + +    +G
Sbjct: 160 GVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKG 217

Query: 222 IDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFL 281
           +D  F++VG    +  L  ++ +G     G  S           ++ +L  K I L    
Sbjct: 218 VDASFDSVGKDTFEISLAALKRKGVFVSFGNASG----LIPPF-SITRLSPKNITLVRPQ 272

Query: 282 AGDYYH---LYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
              Y      +  + +     +   K+         L +   A   + + + VGK ++ +
Sbjct: 273 LYGYIADPEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEI 332

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 86.1 bits (214), Expect = 3e-19
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+TA   L++    K G+YV + AA+G +G ++  +A+  G  V+G+  ++EK +  + K
Sbjct: 130 GMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-K 188

Query: 196 FGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
            G     NY  + D    ++     +G+D+ ++++G   L   L  +R RG  A  G  S
Sbjct: 189 LGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 85.7 bits (213), Expect = 4e-19
 Identities = 60/292 (20%), Positives = 100/292 (34%), Gaps = 62/292 (21%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWE--------EYSLVTAPQLLIK---IQHT 121
           VDSF  G               D V+G TG          +++ V A  L  K   +   
Sbjct: 82  VDSFRVG---------------DAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMR 126

Query: 122 D---VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY 178
               +PL           +TA+ GL +    + G+ V +    G VG +  Q A   G  
Sbjct: 127 QASVLPLV---------FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGAR 177

Query: 179 VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVL 238
           V  +A     ++ ++   G       +E  D  A       QG D+ ++ +GG +LDA  
Sbjct: 178 VFATA-RGSDLEYVR-DLGATPIDASREPEDYAAEHTA--GQGFDLVYDTLGGPVLDASF 233

Query: 239 LNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG------FLAGDYYHLYPKF 292
             ++  G +  C            G H L  L  K+    G       LA +    + + 
Sbjct: 234 SAVKRFGHVVSCLGW---------GTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEM 284

Query: 293 LELVIPAIREGKM-VYVEDIAEGLENAPAALVGLF----TGRNVGKQLVAVA 339
           L      ++ GK+   ++     +    +A   +       R  GK  + V 
Sbjct: 285 LREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 84.9 bits (211), Expect = 6e-19
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK 193
           + G+T    L +    K GE +   AA+G VG L  Q+AK  G  ++G+  S EK    K
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182

Query: 194 NKFGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGM 252
              G  +  +Y  E D+   +      +   + ++ VG       L ++  RG +   G 
Sbjct: 183 -ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240

Query: 253 IS 254
            S
Sbjct: 241 AS 242

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+T Y  L +    K  E     AA+G VG +  Q+AK  G  ++G+ G+ +K      K
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-K 183

Query: 196 FGFDDAFNYKEEPDLDAALKRCFP-QGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
            G     NY+EE DL   LK     + + + +++VG    +  L  ++ RG +   G  S
Sbjct: 184 AGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 80.9 bits (200), Expect = 3e-17
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 43/293 (14%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVP--LSYYTG 130
           V     G+  +   +       D   G+  + +Y++    ++  KI     P  LS+   
Sbjct: 81  VTHIQVGDRVYGAQNEMCPRTPD--QGA--FSQYTVTRG-RVWAKI-----PKGLSFEQA 130

Query: 131 -ILGMPGVTAYAGLYEV------------CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC 177
             L     TA   +  +             +  K  YV V   S A   +  Q  +L+G 
Sbjct: 131 AALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY 190

Query: 178 YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG----KM 233
             + +  S    DL K   G ++ F+Y+  P+L   ++      +    + +        
Sbjct: 191 IPIATC-SPHNFDLAK-SRGAEEVFDYR-APNLAQTIRTYTKNNLRYALDCITNVESTTF 247

Query: 234 LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE---QLIGKRIRLEGFLAG----DYY 286
             A +   R  G         ++   +     +      + G+              +  
Sbjct: 248 CFAAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEER 305

Query: 287 HLYPKFLELVIPAIREGKM--VYVEDIAEGLENAPAALVGLFTGRNVGKQLVA 337
                   +    + +G++    +  +  G ++    +  +  G   G++LV 
Sbjct: 306 QFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVV 358

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 78.4 bits (193), Expect = 2e-16
 Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 21/193 (10%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTGI-LGMPGVTAYAGLYEVCSPKKGEYVYVS 158
            + +Y  + A Q L+      +P   +   G    +  +TA  G+ E    +    +  +
Sbjct: 126 MYSQYRCIPADQCLV------LPEGATPADGASSFVNPLTAL-GMVETMRLEGHSALVHT 178

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF 218
           AA+  +GQ++ Q     G  +V     +E+ DLLK   G     N      +    +   
Sbjct: 179 AAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASPTFMQDLTEALV 237

Query: 219 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVH----------NLE 268
             G  I F+  GG  L   +L              S+Y     + V+             
Sbjct: 238 STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEFN 297

Query: 269 QLIGKRIRLEGFL 281
           +  G    + G+L
Sbjct: 298 RNFGMAWGMGGWL 310

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 62/279 (22%), Positives = 94/279 (33%), Gaps = 57/279 (20%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWE-------EYSLVTAPQLLIK---IQHTD 122
           V++ + G               D V G  G+        EY   +   ++ K   +    
Sbjct: 86  VNNVNIG---------------DKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQ 130

Query: 123 ---VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV 179
              +P +         G+TA   L      K+G+ V + A +G VG L  Q AK  G  V
Sbjct: 131 AASLPTA---------GLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTV 180

Query: 180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
           + +A SK     LK   G +   NY EE  L A         +D   + VGG +    + 
Sbjct: 181 ITTA-SKRNHAFLK-ALGAEQCINYHEEDFLLAI-----STPVDAVIDLVGGDVGIQSID 233

Query: 240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPA 299
            ++  G I         ++        +E    K  R  G L         + L  +   
Sbjct: 234 CLKETGCIV--------SVPTITAGRVIEVAKQKHRRAFGLLK----QFNIEELHYLGKL 281

Query: 300 IREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
           + E K+         L  A  A   L TG   GK +  V
Sbjct: 282 VSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 75.6 bits (187), Expect = 1e-15
 Identities = 58/244 (23%), Positives = 90/244 (36%), Gaps = 28/244 (11%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVP--LSYYTG-ILGMPGVTAYAGLYEVCSPKKGEYVYVS 158
           G  E   V    LL       +P  LS        +  +TAY  L +    + GE V V 
Sbjct: 80  GLAERVAVPKGALL------PLPEGLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQ 132

Query: 159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF 218
           AA+GA+G    Q A+  G  V+ +A   EK+ L     G ++A  Y E        K   
Sbjct: 133 AAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEV---PERAKA-- 186

Query: 219 PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLE 278
             G+D+  E V GK ++  L  +   GR+   G       E         +L+ + + + 
Sbjct: 187 WGGLDLVLE-VRGKEVEESLGLLAHGGRLVYIGAAEG---EVAPI--PPLRLMRRNLAVL 240

Query: 279 GFLAGDYYHLYPK----FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQ 334
           GF                L  ++P +   ++  V         A AA   L    + GK 
Sbjct: 241 GF-WLTPLLREGALVEEALGFLLPRL-GRELRPVVGPVFPFAEAEAAFRALLDRGHTGKV 298

Query: 335 LVAV 338
           +V +
Sbjct: 299 VVRL 302

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 74.7 bits (184), Expect = 3e-15
 Identities = 57/291 (19%), Positives = 100/291 (34%), Gaps = 54/291 (18%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWE------EYSLVTAPQLLIK---IQHTD- 122
           V  F PG               D VW +          E+ +V+  ++  K   + HT  
Sbjct: 113 VKYFKPG---------------DEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQA 157

Query: 123 --VPLSYYTGILGMPGVTAYAGLYEV----CSPKKGEYVYVSAASGAVGQLVGQFAKLAG 176
             +P            +TA++ + +V         G+ V +  ASG VG    Q  K   
Sbjct: 158 ASLPYV---------ALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD 208

Query: 177 CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDA 236
            +V     S++  +L++ K G DD  +YK    ++  LK    +  D   +NVGG     
Sbjct: 209 AHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETW 263

Query: 237 VLLNMRLR--GRIAVCGMISQYNLEKPEGVHNLEQLIG--KRIRLEGFLAGDYYHLY--- 289
               ++                N+++      + Q         L+ F  G +Y      
Sbjct: 264 APDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFM 323

Query: 290 --PKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
                L+ +   +  GK+  V +        P A + +  G   GK ++ V
Sbjct: 324 ASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score = 73.8 bits (182), Expect = 6e-15
 Identities = 46/242 (19%), Positives = 92/242 (38%), Gaps = 20/242 (8%)

Query: 97  VWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY 156
             G   + EY +V   + + K++  +   +     L   G+T Y  +    S    + + 
Sbjct: 122 FDG--AYAEYVIVPHYKYMYKLRRLN---AVEAAPLTCSGITTYRAV-RKASLDPTKTLL 175

Query: 157 VSAASGAVGQLVGQFAK-LAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK 215
           V  A G +G +  Q AK ++G  ++G    +E V+  K + G D   N   +  L    +
Sbjct: 176 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQDPLAEIRR 234

Query: 216 RCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKR 274
               +G+D   +     K L      +  +G+  + G+         +  ++   +    
Sbjct: 235 ITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG------ADLHYHAPLITLSE 288

Query: 275 IRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQ 334
           I+  G L G+        + L       GK+  +      LE A  A+  L   + +G+Q
Sbjct: 289 IQFVGSLVGNQSDF-LGIMRLA----EAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQ 343

Query: 335 LV 336
           ++
Sbjct: 344 VL 345

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 28/221 (12%)

Query: 136 GVTAY------AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV 189
           G+TAY       G+    +  +G+ + +   +G VG +  Q AK  G  V+ +A   E +
Sbjct: 129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI 188

Query: 190 DLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM-LDAVLLNMRLRGRIA 248
           +  K K G D   N+KE   L    K    + +D  F      M  D ++  ++ RG IA
Sbjct: 189 EWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIA 245

Query: 249 VCGMISQYNLEKPEGVHNLEQLIGKRIRL--EGFLAGDYYHLYP-----KFLELVIPAIR 301
               I        E   +L  L  K +    E   A             ++LE +   + 
Sbjct: 246 ---TIVA-----FENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVE 297

Query: 302 EGKM-VYVEDIAEG--LENAPAALVGLFTGRNVGKQLVAVA 339
           +         + EG   EN   A   L +   +GK ++ + 
Sbjct: 298 QNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN 338

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 44/194 (22%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWE------EYSLVTAPQLLIK---IQHTD- 122
           V  F PG               D V+ +          E+ LV    +  K   +   + 
Sbjct: 100 VTLFRPG---------------DEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEA 144

Query: 123 --VPLSYYTGILGMPGVTAYAGLYEV-----CSPKKGEYVYVSAASGAVGQLVGQFAK-L 174
             +PL   T I      TA+   ++        P     + +   +G VG +  Q A+  
Sbjct: 145 AALPL---TSI------TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQR 195

Query: 175 AGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML 234
               V+ +A   E  + +K   G     ++  +P               ++      K  
Sbjct: 196 TDLTVIATASRPETQEWVK-SLGAHHVIDHS-KPLAAEVAALGLGAPAFVFSTTHTDKHA 253

Query: 235 DAVLLNMRLRGRIA 248
             +   +  +GR  
Sbjct: 254 AEIADLIAPQGRFC 267

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 48/237 (20%), Positives = 81/237 (34%), Gaps = 27/237 (11%)

Query: 102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSP-KKGEYVYVSAA 160
              EY +V + + L+ I   D+       +    G+T Y  +  V      G    V   
Sbjct: 124 SMAEYMIVDSARHLVPIG--DLDPVAAAPLTD-AGLTPYHAISRVLPLLGPGSTAVVIGV 180

Query: 161 SGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP 219
            G +G +  Q  +      V+      +++ L + + G D A         DA  +    
Sbjct: 181 -GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGAGA-ADAIRELTGG 237

Query: 220 QGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE--QLIGKRIR 276
           QG    F+ VG    +D     + + G I+V G+          G H      +I     
Sbjct: 238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGI--------HAGAHAKVGFFMIPFGAS 289

Query: 277 LEGFLAGDYYHLYPKFLELVIPAIREGKM-VYVEDIAEGLENAPAALVGLFTGRNVG 332
           +     G    L  + + L     R G++ ++ E     L+  PAA   L  G   G
Sbjct: 290 VVTPYWGTRSEL-MEVVALA----RAGRLDIHTETF--TLDEGPAAYRRLREGSIRG 339

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 59.9 bits (145), Expect = 5e-10
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 12/128 (9%)

Query: 123  VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
            VP+ Y          TAY  L      + GE V + + SG VGQ     A   GC V  +
Sbjct: 1648 VPIVY---------TTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTT 1698

Query: 183  AGSKEKVDLLKNKF-GFDDA--FNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL 239
             GS EK   L+ +F   D+    N ++       L+    +G+D+   ++  + L A + 
Sbjct: 1699 VGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVR 1758

Query: 240  NMRLRGRI 247
             +   GR 
Sbjct: 1759 CLAQHGRF 1766

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 56.4 bits (137), Expect = 9e-10
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 133 GMPGV--TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
                  TA+  L EV     GE V + +A+G VG      AK+ G  +  +AGS  K +
Sbjct: 18  TFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 77

Query: 191 LLKNKFGFDDAFN 203
           +L  + G +   +
Sbjct: 78  MLS-RLGVEYVGD 89

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 58.4 bits (142), Expect = 9e-10
 Identities = 40/196 (20%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 105 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAV 164
            + ++     ++K+      L     +    G TAY    E      G+ V +  A G +
Sbjct: 151 SHIVLDPETDVLKV-SEKDDLDV-LAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPL 207

Query: 165 GQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA---LKRCFPQ 220
           G      A+  G   V+  AGS  ++ L + + G D   N +E    +     +     +
Sbjct: 208 GLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRETSVEERRKAIMDITHGR 266

Query: 221 GIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG 279
           G D   E  G  + L      +R  G  +V G+      + P      E L+ K    +G
Sbjct: 267 GADFILEATGDSRALLEGSELLRRGGFYSVAGVAVP---QDPVPFKVYEWLVLKNATFKG 323

Query: 280 FLAGDYYHLYPKFLEL 295
               D  H   K + +
Sbjct: 324 IWVSDTSHF-VKTVSI 338

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 58.1 bits (141), Expect = 1e-09
 Identities = 55/231 (23%), Positives = 82/231 (35%), Gaps = 44/231 (19%)

Query: 128 YTGILGMPGVTAYAG---LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
               +G  G TA      L E     +   V V+ A+G VG L        G  V  S G
Sbjct: 123 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG 182

Query: 185 SKEKVDLLKNKFGFDDAFNYKEEPDLDAA-----LKRCFPQGIDIYFENVGGKMLDAVLL 239
              + D L+   G   A       D+ A       K+ +   +D     VGG+ L  VL 
Sbjct: 183 KAAEHDYLR-VLG---AKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGRTLATVLS 234

Query: 240 NMRLRGRIAVCGMISQYNLE-----------KPEGVHNLEQLIGKRIRLEGFLAGDYYHL 288
            MR  G +AV G+     +               G+ ++   +  R+R+   LAGD   L
Sbjct: 235 RMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGD---L 291

Query: 289 YPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA 339
            P    +             ++I   L   P AL  +  G   G+ +V +A
Sbjct: 292 KPDLERI------------AQEI--SLAELPQALKRILRGELRGRTVVRLA 328

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 48/225 (21%), Positives = 74/225 (32%), Gaps = 35/225 (15%)

Query: 128 YTGILGMPGVTAYAGLYEVCS---PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
              I+G  G TA   +  +       +   V V+ ASG VG          G  V   +G
Sbjct: 120 NAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG 179

Query: 185 SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR 244
            +     LK   G +   +  E  +     K+ +   ID     VG K+L  VL  M   
Sbjct: 180 RESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVLAQMNYG 234

Query: 245 GRIAVCGMISQYNLE-----------KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL 293
           G +A CG+   + L            + +GV ++     +R      L  D   L   F 
Sbjct: 235 GCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKD---LPESFY 291

Query: 294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
                 I              L +AP     +   +  G+ LV +
Sbjct: 292 AQAATEI-------------TLADAPKFADAIINNQVQGRTLVKI 323

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 43/223 (19%), Positives = 87/223 (39%), Gaps = 25/223 (11%)

Query: 125 LSYYTGILGMP-GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGS 182
             +  G L  P  V   A +      + G+ V +    G +G       K AG   V+ S
Sbjct: 186 RLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILS 244

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-----MLDAV 237
             S+ + +L K + G D   +  +E  ++A L      G  ++ E  G        ++ V
Sbjct: 245 EPSEVRRNLAK-ELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEV 303

Query: 238 LLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVI 297
               R RG  A   ++++ + + P      E    +R ++ G      +  +P+ + L+ 
Sbjct: 304 --IWRARGINATVAIVARADAKIP---LTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMA 358

Query: 298 PAIREGKMVY----VEDIAEGLENAPAALVGLFTGRNVGKQLV 336
             +   K++     +E+I E ++        L T +++ K  +
Sbjct: 359 SGMDMTKIISKTVSMEEIPEYIKR-------LQTDKSLVKVTM 394

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 42/275 (15%), Positives = 73/275 (26%), Gaps = 55/275 (20%)

Query: 73  VDSFHPGELKFWILHIQNYAKDDLVWGSTGWE------EYSLVTAPQLLIK---IQHTD- 122
           VDS   G                 V   T  +      E++++   +++     +     
Sbjct: 77  VDSKMLG---------------RRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERA 121

Query: 123 --VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV 180
             +P          P +TA+    E     K   V +    GAV  L+ Q    AG  V 
Sbjct: 122 AALPC---------PLLTAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVD 170

Query: 181 GSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLN 240
               +     L   K G    +    +            Q     F+ V  +   A++ +
Sbjct: 171 L-VSASLSQALAA-KRGVRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPS 218

Query: 241 MRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP--KFLELVIP 298
           ++  G I     I        +          +         GD        +  E ++ 
Sbjct: 219 LKANGHII---CIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT 275

Query: 299 AIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGK 333
            I +GKM          E    AL      +    
Sbjct: 276 LIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTV 310

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 57.2 bits (139), Expect = 2e-09
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 23/183 (12%)

Query: 148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE 206
            P  G+ V ++ A G +G L    AK +G   V+ S  S  + +L K K G D   N  E
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221

Query: 207 EPDLDAALKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVH 265
           E  +   +      G+D++ E  G  K L+  L  +   GR+++ G+           + 
Sbjct: 222 EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-----YPGKVTID 276

Query: 266 NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGK----------MVYVEDIAEGL 315
               +I K + + G      +  +     L    ++ GK              +   E  
Sbjct: 277 FNNLIIFKALTIYGITGRHLWETWYTVSRL----LQSGKLNLDPIITHKYKGFDKYEEAF 332

Query: 316 ENA 318
           E  
Sbjct: 333 ELM 335

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 55.3 bits (134), Expect = 7e-09
 Identities = 26/149 (17%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 208
             G+ V ++ A G +G +     + +G   ++ S  +  ++   +  +  D   N  EE 
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218

Query: 209 DLDAALKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL 267
           DL   ++R    G+++  E  G    +   L+ +   G   + G+        P      
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGI-----PSDPIRFDLA 273

Query: 268 EQLIGKRIRLEGFLAGDYYHLYPKFLELV 296
            +L+ + I   G      +  + +   LV
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTALV 302

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 16/181 (8%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE 207
             + + V +  A G +G L  Q A   G   V     S EK+ L K  FG    FN  E 
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM 215

Query: 208 PDLDAALKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN 266
                       +   +  E  G  + ++  +       ++A+ G + Q   +       
Sbjct: 216 SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ---DLHLTSAT 272

Query: 267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM---------VYVEDIAEGLEN 317
             +++ K + + G           +  E     + E K+            E  A+ + +
Sbjct: 273 FGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRD 332

Query: 318 A 318
            
Sbjct: 333 I 333

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 36/227 (15%)

Query: 128 YTGILGMPGVTAYAGLYEVCS---PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG 184
              + G  G TA   ++ +       +   V V+ A+G VG +        G  VV S G
Sbjct: 124 EAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTG 183

Query: 185 SKEKVDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           ++E  D LK + G  +  + ++  +  L A  K+ +   +D     VGGK L ++L  ++
Sbjct: 184 NREAADYLK-QLGASEVISREDVYDGTLKALSKQQWQGAVD----PVGGKQLASLLSKIQ 238

Query: 243 LRGRIAVCGMISQYNLE-----------KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK 291
             G +AV G+     +               G+ ++   +  R  +   ++ D   L P 
Sbjct: 239 YGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSD---LKPD 295

Query: 292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV 338
            L  ++            ++   LE  P AL  +   R  G+ +V +
Sbjct: 296 QLLTIV----------DREV--SLEETPGALKDILQNRIQGRVIVKL 330

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 29/185 (15%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE 207
            K G  V +    G +G L  Q A+LAG   V+ S     K  L + + G     +    
Sbjct: 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG 237

Query: 208 PDLDAALKR---CFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEG 263
            D+  A+       P G+D+  E  G  + +       +  G + + G+     L + E 
Sbjct: 238 -DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGV-----LPQGEK 291

Query: 264 VH-NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM---------VYVEDIAE 313
           V      ++ + +R+ G        ++ +  +L    +  G +         + +++  +
Sbjct: 292 VEIEPFDILFRELRVLGSFI--NPFVHRRAADL----VATGAIEIDRMISRRISLDEAPD 345

Query: 314 GLENA 318
            + N 
Sbjct: 346 VISNP 350

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 52.2 bits (126), Expect = 9e-08
 Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 8/149 (5%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           G+T Y  L +  +   G +V +S A+G +G L  Q+AK  G  V+G  G + K +L +  
Sbjct: 155 GITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212

Query: 196 FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM-LDAVLLNMRLRGRIAVCGMIS 254
            G +   ++ +E D+  A+ +    G          +  ++A    +R  G   + GM  
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM-- 270

Query: 255 QYNLEKPEGVHNLEQLIGKRIRLEGFLAG 283
                  +   ++   + K I + G   G
Sbjct: 271 ---PAGAKCCSDVFNQVVKSISIVGSYVG 296

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 133 GMPGV--TAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
            +P V  TAY  L ++   + GE + V +A+G VG    Q A+  G  V  +A   +   
Sbjct: 325 SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQA 384

Query: 191 L 191
           +
Sbjct: 385 V 385

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 49.5 bits (119), Expect = 6e-07
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 27/183 (14%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEE 207
              G  V V  A G +G +    AK  G   VV +  S  ++   K + G D      +E
Sbjct: 169 VTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKE 226

Query: 208 PDLDAA--LKRCFPQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV 264
              + A  ++       ++  E  G    + A +   R  G + + G+            
Sbjct: 227 SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLG------SEMTT 280

Query: 265 HNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM---------VYVEDIAEGL 315
             L     + + ++G     Y + +P  + +    +    +           +E   E  
Sbjct: 281 VPLLHAAIREVDIKGVFR--YCNTWPVAISM----LASKSVNVKPLVTHRFPLEKALEAF 334

Query: 316 ENA 318
           E  
Sbjct: 335 ETF 337

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 29/185 (15%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEE 207
            + G+ V +  A G +G +    AK AG   +V +   + ++   K +   +   +  E 
Sbjct: 177 VRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EICPEVVTHKVER 234

Query: 208 PDLDAALKRCF----PQGIDIYFENVG-GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPE 262
              + + K+           +  E  G    + A +  ++  G++ V G+       K E
Sbjct: 235 LSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVG------KNE 288

Query: 263 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKM---------VYVEDIAE 313
                 +   + + L+      Y + +P+ + L    +  G +           +ED  +
Sbjct: 289 IQIPFMRASVREVDLQFQYR--YCNTWPRAIRL----VENGLVDLTRLVTHRFPLEDALK 342

Query: 314 GLENA 318
             E A
Sbjct: 343 AFETA 347

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 45.9 bits (109), Expect = 8e-06
 Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 19/189 (10%)

Query: 149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP 208
                 V V    G +G L     +  G  V  +   +     ++     +   NY    
Sbjct: 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREP--TEVEQTVIEETKTNYYNSS 234

Query: 209 DLDAALKRCFPQGIDIYFENVG--GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN 266
           +    LK       D+  +  G    +L  V+  +   G + + G  +  +   P     
Sbjct: 235 NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFST--SGSVPLDYKT 291

Query: 267 LEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE------GLENAPA 320
           L++++     + G + G   H      +  +  +   K +Y +           + +   
Sbjct: 292 LQEIVHTNKTIIGLVNGQKPH-----FQQAVVHLASWKTLYPKAAKMLITKTVSINDEKE 346

Query: 321 ALVGLFTGR 329
            L  L    
Sbjct: 347 LLKVLREKE 355

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 16/151 (10%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           GVT Y  L +V   K GE+V +    G +G +  Q+AK  G  VV      EK++L K +
Sbjct: 150 GVTTYKAL-KVTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E 206

Query: 196 FGFDDAFNYKEEPDLDAALKRCFPQGID-IYFENVGGKMLDAVLLNMRLRGRIAVCGMIS 254
            G D   N  +E D    +K     G+       V      +   ++R  G   + G+  
Sbjct: 207 LGADLVVNPLKE-DAAKFMKEKVG-GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGL-- 262

Query: 255 QYNLEKPEGVHNLE--QLIGKRIRLEGFLAG 283
                 P     +     +   I++ G + G
Sbjct: 263 ------PPEEMPIPIFDTVLNGIKIIGSIVG 287

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK 195
           GVT Y GL +V   + G++V +S   G +G +  Q+A+  G  V        K++L + +
Sbjct: 152 GVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-R 208

Query: 196 FGFDDAFNYKEEPDLDAALKRCF--PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI 253
            G + A N + + D  A L++      G+ +    V  K     +  +R  G IA+ G+ 
Sbjct: 209 LGAEVAVNAR-DTDPAAWLQKEIGGAHGVLVT--AVSPKAFSQAIGMVRRGGTIALNGL- 264

Query: 254 SQYNLEKPEGVHNLE--QLIGKRIRLEGFLAG 283
                  P G        ++ K I + G + G
Sbjct: 265 -------PPGDFGTPIFDVVLKGITIRGSIVG 289

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.94
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.8
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.78
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.65
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.64
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.46
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.37
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.35
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.25
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.25
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.1
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	98.0
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.98
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.98
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.98
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.96
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.88
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.86
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.84
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.84
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.84
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.84
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.84
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.82
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.82
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.81
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.8
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.79
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.79
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.78
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.78
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.77
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.77
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.76
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.75
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.75
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.74
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.74
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.73
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.73
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.72
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.72
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.72
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.72
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.71
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.71
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.7
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.7
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.69
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.68
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.68
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.68
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.67
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.67
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.67
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.67
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.67
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.67
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.66
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.66
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.65
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.65
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.65
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.65
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.64
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.64
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.64
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.64
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.64
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.64
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.64
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.64
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.64
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.63
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.63
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.63
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.63
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.63
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.63
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.63
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.62
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.62
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.62
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.61
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.61
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.61
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.61
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.61
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.6
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.6
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.6
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.59
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.59
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.59
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.59
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.58
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.58
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.58
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.58
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.57
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.57
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.56
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.56
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.56
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.56
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.55
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.55
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.55
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.55
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.54
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.54
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.54
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.54
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.54
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.54
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.53
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.52
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.52
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.52
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.52
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.52
1spx_A	278	Short-chain reductase family member (5L265); paral	97.52
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.51
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.51
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.51
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.5
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.5
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.5
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.5
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.49
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.49
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.49
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.49
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.49
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.48
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.48
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.48
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.48
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.47
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.47
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.46
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.46
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.44
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.44
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.43
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.42
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.42
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.42
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.41
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.41
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.41
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.41
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.41
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.41
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.4
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.4
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.39
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.39
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.38
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.38
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.38
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.38
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.38
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.37
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.37
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.36
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.36
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.35
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.35
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.35
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.34
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.33
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.32
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.32
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.32
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.32
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.32
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.31
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.31
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.31
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.31
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.3
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.3
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.3
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.3
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.3
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.29
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	97.29
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.29
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.28
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.27
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.27
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.26
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.26
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.24
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.24
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.24
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.23
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.22
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.22
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.21
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.21
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.2
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.19
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.18
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.18
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.16
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.16
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.15
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.14
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.14
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.12
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.12
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.11
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.11
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.11
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.1
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.09
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.09
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.09
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.08
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	97.06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.05
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	97.04
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.03
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.02
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.01
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.01
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.0
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.97
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.96
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.96
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.95
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.95
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.94
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.93
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.91
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.89
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.89
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.88
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.87
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.87
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.86
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.85
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.85
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.85
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.85
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.84
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	96.84
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.83
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.82
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.81
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.81
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.8
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.8
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.8
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.79
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.79
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.79
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.78
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.77
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.77
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.77
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	96.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.72
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	96.72
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.72
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.71
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	96.71
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.71
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.71
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.67
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.67
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.66
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.66
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.65
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.64
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	96.62
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.62
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.61
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	96.61
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.6
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.59
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.56
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.56
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.56
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.56
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.55
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.55
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.53
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.53
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.53
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.52
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.52
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.52
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	96.49
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	96.49
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.48
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.48
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	96.48
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.46
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.45
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.45
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.45
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.44
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.44
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.43
2b25_A	336	Hypothetical protein; structural genomics, methyl	96.42
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.42
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.41
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.41
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	96.4
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	96.39
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.38
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.38
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	96.35
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.33
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.33
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.33
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.32
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.32
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.31
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.31
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.3
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.3
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	96.3
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	96.28
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.28
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.28
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	96.25
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.24
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.22
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.2
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.2
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.19
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	96.18
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	96.16
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.16
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.15
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	96.15
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.14
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	96.14
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	96.13
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.12
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.12
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.12
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.11
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	96.08
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.07
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.07
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	96.04
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	96.04
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.04
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.01
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.0
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	95.98
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	95.96
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.95
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.95
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.95
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	95.94
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.93
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.91
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.91
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.91
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	95.9
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.87
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.86
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	95.85
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.83
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.83
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.81
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.8
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.79
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	95.78
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.77
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	95.77
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.77
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.76
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.75
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.75
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.74
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.72
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.72
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	95.71
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.69
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.67
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.66
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	95.65
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.65
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.64
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.63
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.63
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.62
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.61
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.6
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.6
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.6
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.6
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.59
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	95.58
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.58
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	95.58
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.56
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	95.56
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.55
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.53
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.53
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.53
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	95.52
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.52
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	95.51
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	95.51

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=4.7e-53  Score=381.01  Aligned_cols=317  Identities=22%  Similarity=0.268  Sum_probs=276.6

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      +||.+|||+++.++  |.|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|
T Consensus        24 ~~p~~MkA~~~~~~--g~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G   95 (353)
T 4dup_A           24 SLPQEMRFVDLKSF--GGP--DVMVIGK--RPLP-VAGE-GEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSG   95 (353)
T ss_dssp             CCCSSEEEEEESSS--SSG--GGEEEEE--ECCC-CCCT-TEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEE
T ss_pred             CCChheeEEEEccC--CCc--cceEEEe--ccCC-CCCC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEE
Confidence            47889999999998  777  5666655  5556 3488 9999999999999999999998765444568999999999


Q ss_pred             e-----eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           85 I-----LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                      +     +++++|++||||+++   |+|+||++++++. ++++ |++++.. ++|+++.+++|||+++.+.+++++|++||
T Consensus        96 ~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  172 (353)
T 4dup_A           96 EIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQ-ILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGESVL  172 (353)
T ss_dssp             EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEEE
T ss_pred             EEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHH-cEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence            9     788999999999986   8999999999999 9999 9996555 68889999999999998889999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDA  236 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~  236 (339)
                      |+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++++++. ++.+.+++.+++++|++|||+|++.+..
T Consensus       173 V~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~~  250 (353)
T 4dup_A          173 IHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFER  250 (353)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGGGHHH
T ss_pred             EEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHHHHHH
Confidence            9999999999999999999999999999999999999 9999999999987 9999999988449999999999999999


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc-----hhHHHHHHHHHHHHcCCceeeeee
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH-----LYPKFLELVIPAIREGKMVYVEDI  311 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~l~~g~~~~~~~~  311 (339)
                      ++++|+++|+++.+|......    ....+...++.+++++.|+.......     ...+.++++++++++|++++.+..
T Consensus       251 ~~~~l~~~G~iv~~g~~~~~~----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~  326 (353)
T 4dup_A          251 NIASLAKDGCLSIIAFLGGAV----AEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK  326 (353)
T ss_dssp             HHHTEEEEEEEEECCCTTCSE----EEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEE
T ss_pred             HHHHhccCCEEEEEEecCCCc----ccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcce
Confidence            999999999999998754321    11145677888999999988765421     223347889999999999999999


Q ss_pred             eeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          312 AEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       312 ~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +|+++++++|++.+.+++..||+|+++
T Consensus       327 ~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          327 VFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             EEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             EEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999999999999999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=8.3e-53  Score=377.84  Aligned_cols=313  Identities=18%  Similarity=0.178  Sum_probs=266.7

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      ++|.+|||+++.++  ++|  +.+++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|
T Consensus        17 ~~p~~MkA~~~~~~--g~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G   88 (342)
T 4eye_A           17 QGPGSMKAIQAQSL--SGP--EGLVYTD--VETP-GAGP-NVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAG   88 (342)
T ss_dssp             -CCCEEEEEEECSS--SGG--GGEEEEE--EECC-CCCT-TCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEE
T ss_pred             cCCcceEEEEEecC--CCC--ceeEEEe--CCCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEE
Confidence            46788999999998  777  4566655  5556 3488 9999999999999999999998765445678999999999


Q ss_pred             e-----eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           85 I-----LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                      +     ++++ |++||||+++   |+|+||++++++. ++++ |++++.. ++|+++.+++|||+++.+.+++++|++||
T Consensus        89 ~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~Vl  164 (342)
T 4eye_A           89 VVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSN-ILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGETVL  164 (342)
T ss_dssp             EEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHH-eEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence            9     6777 9999999986   7999999999999 9999 9995554 67799999999999998889999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|++|++|++++|+|+.+|++|+++++++++++.++ ++|++++++++ . ++.+.+++.+++ ++|++|||+|++.+.
T Consensus       165 V~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~~~~~  241 (342)
T 4eye_A          165 VLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGGPAFD  241 (342)
T ss_dssp             ESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC--CHH
T ss_pred             EECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCchhHHH
Confidence            9999999999999999999999999999999999999 89999999998 5 999999999988 999999999999999


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc----cchhHHHHHHHHHHHHcCCceeeeee
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYPKFLELVIPAIREGKMVYVEDI  311 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~l~~g~~~~~~~~  311 (339)
                      .++++++++|+++.+|...+.     ....+...++.+++++.++....+    ++...+.++++++++++| +++.+..
T Consensus       242 ~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~  315 (342)
T 4eye_A          242 DAVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSA  315 (342)
T ss_dssp             HHHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEE
T ss_pred             HHHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcce
Confidence            999999999999999875432     112233446778999988876544    344557799999999999 9999989


Q ss_pred             eeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          312 AEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       312 ~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +|+++++++|++.+.+++..||+|+++
T Consensus       316 ~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          316 RIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             EEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            999999999999999999999999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.9e-51  Score=368.62  Aligned_cols=320  Identities=38%  Similarity=0.630  Sum_probs=275.4

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCe----eE
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEL----KF   83 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e----~~   83 (339)
                      ++|||+++++++.|.|.++.+++++  .|.| .+++ +||+|||+++|||++|++.+.+...  ..+|.++|||    ++
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~d~~~~~~~~~--~~~p~~~G~e~g~~~~   79 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVE--TPLG-EPAE-GQILVKNEYLSLDPAMRGWMNDARS--YIPPVGIGEVMRALGV   79 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEE--EECC-CCCT-TCEEEEEEEEECCTHHHHHHSCSCC--SSCCCCTTSBCCCEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEe--ccCC-CCCC-CEEEEEEEEEEeCHHHHhhhhcccc--cCCCCCCCcccCCceE
Confidence            5689999998666766667888866  4555 3478 9999999999999999988876432  3567788887    78


Q ss_pred             Ee---eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCccccc--cccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           84 WI---LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPLSYYT--GILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        84 G~---~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~~~~a--a~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                      |+   +++++|++||||++.|+|+||++++++. ++++ |++++.. ++  ++++++++|||++|.+.+++++|++|||+
T Consensus        80 G~V~~~~v~~~~vGdrV~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~  156 (336)
T 4b7c_A           80 GKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKG-FYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVVIS  156 (336)
T ss_dssp             EEEEEECSTTCCTTCEEEEECCSBSEEEECCTT-CEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEES
T ss_pred             EEEEecCCCCCCCCCEEeccCCceEEEEechHH-eEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            98   6899999999999999999999999999 9999 9985333 43  78999999999999888999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHH
Q 037444          159 AASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLL-KNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV  237 (339)
Q Consensus       159 ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~  237 (339)
                      |++|++|++++|+|+..|++|+++++++++.+.+ + ++|+++++++++. ++.+.+++.+++++|++|||+|++.+..+
T Consensus       157 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~  234 (336)
T 4b7c_A          157 GAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTV  234 (336)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHHHH
Confidence            9999999999999999999999999999999999 6 9999999999887 99999999986699999999999999999


Q ss_pred             HHhhccCCEEEEEecccccCCCC-CccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcc
Q 037444          238 LLNMRLRGRIAVCGMISQYNLEK-PEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLE  316 (339)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~  316 (339)
                      +++++++|+++.+|.....+... .....+...++.+++++.++....+.....+.++++++++++|++++.+..+++++
T Consensus       235 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  314 (336)
T 4b7c_A          235 LTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLE  314 (336)
T ss_dssp             HTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGG
T ss_pred             HHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHH
Confidence            99999999999999765321101 11234556788899999998877665556688999999999999999988889999


Q ss_pred             cHHHHHHHhHcCCccceEEEEe
Q 037444          317 NAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       317 ~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++|++.+.+++..||+|+++
T Consensus       315 ~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          315 TFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             GHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHcCCCCceEEEeC
Confidence            9999999999999999999985

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=3e-52  Score=377.20  Aligned_cols=307  Identities=22%  Similarity=0.255  Sum_probs=270.6

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |+.+|||++++++   +|  +.+++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+
T Consensus        24 m~~~mkA~~~~~~---~~--~~l~~~e--~p~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~   94 (363)
T 3uog_A           24 MSKWMQEWSTETV---AP--HDLKLAE--RPVP-EAGE-HDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGV   94 (363)
T ss_dssp             CCSEEEEEEBSCT---TT--TCCEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEE
T ss_pred             CchhhEEEEEccC---CC--CCcEEEe--eeCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEE
Confidence            4677999999875   23  4567765  5556 4488 99999999999999999999987654456799999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                           +++++|++||||++.                           |+|+||++++++. ++++ |++++.. ++|+++
T Consensus        95 V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~  171 (363)
T 3uog_A           95 VEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGW-FVAA-PKSLDAA-EASTLP  171 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGG-EEEC-CTTSCHH-HHHTTT
T ss_pred             EEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHH-eEEC-CCCCCHH-HHhhcc
Confidence                 788999999999975                           7899999999999 9999 9996555 688899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      +++.|||+++.+.+++++|++|||+| +|++|++++|+|+.+|++|+++++++++++.++ ++|++++++.+.+ ++.+.
T Consensus       172 ~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~  248 (363)
T 3uog_A          172 CAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-DWVER  248 (363)
T ss_dssp             THHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc-cHHHH
Confidence            99999999998889999999999999 799999999999999999999999999999998 9999999996555 89999


Q ss_pred             HHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          214 LKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       214 v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                      +++.+++ ++|+||||+|...+..++++|+++|+++.+|.....     ....+...++.+++++.++....     .+.
T Consensus       249 v~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~  318 (363)
T 3uog_A          249 VYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-----RRA  318 (363)
T ss_dssp             HHHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC-----HHH
T ss_pred             HHHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC-----HHH
Confidence            9999988 999999999988999999999999999999875432     12345566788999999988766     778


Q ss_pred             HHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ++++++++++|++++.++.+|+++++++|++.+.+++ .||+|+++
T Consensus       319 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          319 LEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            9999999999999999999999999999999999998 89999985

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=3.5e-52  Score=372.99  Aligned_cols=314  Identities=18%  Similarity=0.224  Sum_probs=273.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      +|.+|||++++++  |.|  +.+++++  .|.| .+++ +||+|||+++|||++|++...|.+.  ..+|.++|||++|+
T Consensus         5 ~p~~mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~--~~~P~i~G~e~~G~   74 (334)
T 3qwb_A            5 IPEQQKVILIDEI--GGY--DVIKYED--YPVP-SISE-EELLIKNKYTGVNYIESYFRKGIYP--CEKPYVLGREASGT   74 (334)
T ss_dssp             CCSEEEEEEESSS--SSG--GGEEEEE--EECC-CCCT-TEEEEEEEEEECCTTHHHHHHTSSC--CCSSEECCSEEEEE
T ss_pred             CchheEEEEEecC--CCC--ceeEEEe--ccCC-CCCC-CEEEEEEEEEecCHHHHHHHCCCCC--CCCCCccccceEEE
Confidence            6788999999998  766  5566654  5556 3488 9999999999999999999988654  34689999999999


Q ss_pred             -----eCCCCCCCCCEEEec--cceeeEEEec-CccceeeccCCCCCcccc---ccccCchhhhHHHHHHHhcCCCCCCE
Q 037444           86 -----LHIQNYAKDDLVWGS--TGWEEYSLVT-APQLLIKIQHTDVPLSYY---TGILGMPGVTAYAGLYEVCSPKKGEY  154 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~--g~~~~~~~v~-~~~~~~~i~p~~~~~~~~---aa~l~~~~~tA~~~l~~~~~~~~g~~  154 (339)
                           +++++|++||||+++  |+|+||++++ ++. ++++ |++++.. +   +++++..+.|||+++.+.+++++|++
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~-~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~  151 (334)
T 3qwb_A           75 VVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGP-VMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHVKKGDY  151 (334)
T ss_dssp             EEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSS-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCCCTTCE
T ss_pred             EEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcce-EEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccCCCCCE
Confidence                 788999999999975  8999999999 888 9999 9996655 5   67889999999999988889999999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhh
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKM  233 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~  233 (339)
                      |||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++++++. ++.+.+++.+++ ++|++|||+|+..
T Consensus       152 vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~~  229 (334)
T 3qwb_A          152 VLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKDT  229 (334)
T ss_dssp             EEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEECCGGGG
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEECCChHH
Confidence            999999999999999999999999999999999999998 9999999999887 999999999987 9999999999999


Q ss_pred             HHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc---cchhHHHHHHHHHHHHcCCceeeee
Q 037444          234 LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVED  310 (339)
Q Consensus       234 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~  310 (339)
                      +..++++|+++|+++.+|...+.     ....+...++.+++++.++....+   +....+.++++++++++|++++.+.
T Consensus       230 ~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~  304 (334)
T 3qwb_A          230 FEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKIY  304 (334)
T ss_dssp             HHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred             HHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCcee
Confidence            99999999999999999875432     123344556778888887766554   3334556789999999999999988


Q ss_pred             eeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          311 IAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       311 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .+|+++++++|++.+.+++..||+|++++
T Consensus       305 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  333 (334)
T 3qwb_A          305 KTYPLRDYRTAAADIESRKTVGKLVLEIP  333 (334)
T ss_dssp             EEEEGGGHHHHHHHHHTTCCCBEEEEECC
T ss_pred             eEEcHHHHHHHHHHHHhCCCceEEEEecC
Confidence            89999999999999999999999999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.9e-51  Score=368.94  Aligned_cols=314  Identities=14%  Similarity=0.209  Sum_probs=264.2

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |+++|||++++++  |.|. +.+++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+
T Consensus         1 M~~~mka~~~~~~--g~p~-~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~   73 (340)
T 3gms_A            1 MSLHGKLIQFHKF--GNPK-DVLQVEY--KNIE-PLKD-NEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGI   73 (340)
T ss_dssp             -CCEEEEEEESSC--SCHH-HHEEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEE
T ss_pred             CCcccEEEEEecC--CCch-heEEEEe--cCCC-CCCC-CEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEE
Confidence            4578999999998  7763 3355554  5556 3488 99999999999999999999997654457799999999999


Q ss_pred             -----eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           86 -----LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                           +++++|++||||+++   |+|+||++++++. ++++ |++++.. ++|+++..++|||+++.+.+++++|++|||
T Consensus        74 V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV  150 (340)
T 3gms_A           74 VENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADF-VVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVLLV  150 (340)
T ss_dssp             EEEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             EEEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHH-eEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEEEE
Confidence                 788999999999976   8999999999999 9999 9996655 688899999999999988899999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHH
Q 037444          158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDA  236 (339)
Q Consensus       158 ~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~  236 (339)
                      +|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+.+++.+++ ++|++|||+|+.....
T Consensus       151 ~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~  228 (340)
T 3gms_A          151 NACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNE  228 (340)
T ss_dssp             SSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHHHHHH
T ss_pred             eCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCChhHHH
Confidence            999889999999999999999999999999999999 8999999999887 999999999988 9999999999988788


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHH-hccccccceecccc-----cchhHHHHHHHHHHHHcCCcee-ee
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLI-GKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVY-VE  309 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~-~~  309 (339)
                      ++++|+++|+++.+|.....       ......+. ..++.+..+....+     .....+.++++++++++|++++ .+
T Consensus       229 ~~~~l~~~G~iv~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i  301 (340)
T 3gms_A          229 LAFSLRPNGHFLTIGLLSGI-------QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKV  301 (340)
T ss_dssp             HHHTEEEEEEEEECCCTTSC-------CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCE
T ss_pred             HHHHhcCCCEEEEEeecCCC-------CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccc
Confidence            88999999999999975432       12222222 23344333333222     2233578999999999999997 47


Q ss_pred             eeeeCcccHHHHHHHhHcCCc-cceEEEEe
Q 037444          310 DIAEGLENAPAALVGLFTGRN-VGKQLVAV  338 (339)
Q Consensus       310 ~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~  338 (339)
                      ..+|+++++++|++.+.+++. .||+++++
T Consensus       302 ~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          302 HSTYELADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             EEEEEGGGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             cEEEeHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence            788999999999999999874 59999986

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=6e-51  Score=363.49  Aligned_cols=310  Identities=21%  Similarity=0.240  Sum_probs=268.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++++++  |+|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+    
T Consensus         2 MkA~~~~~~--g~~--~~l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~v   72 (325)
T 3jyn_A            2 AKRIQFSTV--GGP--EVLEYVD--FEPE-APGP-QAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAV   72 (325)
T ss_dssp             EEEEEBSSC--SSG--GGCEEEE--ECCC-CCCT-TEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEE
T ss_pred             cEEEEEecC--CCc--ceeEEee--cCCC-CCCC-CEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEE
Confidence            799999998  877  5677765  4555 4477 99999999999999999999986543 35689999999999    


Q ss_pred             -eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444           86 -LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                       +++++|++||||++.    |+|+||++++++. ++++ |++++.. ++|+++..++|||+++.+.+++++|++|||+||
T Consensus        73 G~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  149 (325)
T 3jyn_A           73 GDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEAN-LVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAA  149 (325)
T ss_dssp             CTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEEecCCCccccceEEecHHH-eEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence             788999999999874    7999999999999 9999 9996555 688899999999999988899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHH
Q 037444          161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLL  239 (339)
Q Consensus       161 ~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~  239 (339)
                      +|++|++++|+|+..|++|+++++++++++.++ ++|+++++++++. ++.+.+++.+++ ++|++|||+|+..+..+++
T Consensus       150 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~  227 (325)
T 3jyn_A          150 AGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLD  227 (325)
T ss_dssp             TSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGHHHHHT
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHH
Confidence            999999999999999999999999999999999 9999999999987 999999999987 9999999999999999999


Q ss_pred             hhccCCEEEEEecccccCCCCCccccchHHHHhc-cccccceecccc---cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGK-RIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      +|+++|+++.+|...+.     ....+...++.+ ++.+.+..+..+   +....+.++++++++++|++++.+..+|++
T Consensus       228 ~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  302 (325)
T 3jyn_A          228 SVAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYAL  302 (325)
T ss_dssp             TEEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEG
T ss_pred             HhcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcH
Confidence            99999999999975432     123445556655 555554443333   344566788999999999999998889999


Q ss_pred             ccHHHHHHHhHcCCccceEEEEe
Q 037444          316 ENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       316 ~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++|++.+.+++..||+|+.+
T Consensus       303 ~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          303 KDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             GGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999999999999874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.4e-50  Score=364.15  Aligned_cols=307  Identities=20%  Similarity=0.187  Sum_probs=260.6

Q ss_pred             cccceEEEeeccCC---CCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            8 VSNKRVILSNYVTG---FPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         8 ~~~~a~~~~~~~~~---~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      |+|||++++++  |   .|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.   ...+|.++|||++|
T Consensus         1 m~MkA~~~~~~--G~~~~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G   69 (346)
T 3fbg_A            1 MSLKAIGFEQP--FKLSDG--NLFKTFN--LDIP-EPKV-HEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIG   69 (346)
T ss_dssp             -CEEEEEBSSC--CCGGGC--CCCEEEE--ECCC-CCCT-TEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEE
T ss_pred             CCcEEEEEEec--cccCCC--ceeEecc--ccCC-CCCC-CEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEE
Confidence            57999999997  6   44  5566655  5556 3478 99999999999999999988885   24678999999999


Q ss_pred             e-----eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCC---
Q 037444           85 I-----LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPK---  150 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~---  150 (339)
                      +     +++++|++||||++.      |+|+||++++++. ++++ |++++.. ++|++++++.|||++|.+.++++   
T Consensus        70 ~V~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~  146 (346)
T 3fbg_A           70 VVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERL-VAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISRNR  146 (346)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGG-EEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCSSH
T ss_pred             EEEEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHH-eEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCcccc
Confidence            9     788999999999985      7999999999998 9999 9996655 68888999999999998889998   


Q ss_pred             ---CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 ---KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ---~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                         +|++|||+||+|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++  ++.+.+++..++++|++||
T Consensus       147 ~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv~d  223 (346)
T 3fbg_A          147 NENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFC  223 (346)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEEEE
T ss_pred             ccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEEEE
Confidence               9999999999999999999999999999999999999999999 899999999875  7888888884449999999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-------cchhHHHHHHHHHH
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-------YHLYPKFLELVIPA  299 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~  299 (339)
                      |+|+. .+..++++|+++|+++.++...        ...+...+..+++++.++.....       .....+.+++++++
T Consensus       224 ~~g~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  295 (346)
T 3fbg_A          224 TFNTDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNK  295 (346)
T ss_dssp             SSCHHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHH
Confidence            99985 6799999999999999886422        12334455667888777554321       22335778999999


Q ss_pred             HHcCCceeeeeeee---CcccHHHHHHHhHcCCccceEEEEeC
Q 037444          300 IREGKMVYVEDIAE---GLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       300 l~~g~~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +++|++++.+..++   +++++++|++.+.+++..||+|++++
T Consensus       296 ~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~  338 (346)
T 3fbg_A          296 VEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLN  338 (346)
T ss_dssp             HHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC-
T ss_pred             HHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecC
Confidence            99999999888777   99999999999999999999999873

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5e-50  Score=360.71  Aligned_cols=313  Identities=22%  Similarity=0.290  Sum_probs=265.8

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      +.+|||+++.++  +.|  +.+++. .+.|.|. +++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|+ 
T Consensus        27 ~~~Mka~~~~~~--g~~--~~l~~~-~~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V   99 (351)
T 1yb5_A           27 QKLMRAVRVFEF--GGP--EVLKLR-SDIAVPI-PKD-HQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVI   99 (351)
T ss_dssp             -CEEEEEEESSC--SSG--GGEEEE-EEEECCC-CCT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEE
T ss_pred             cceEEEEEEccC--CCc--ceeEEe-eecCCCC-CCC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEE
Confidence            346899999987  766  456661 2355563 478 99999999999999999998886543345789999999999 


Q ss_pred             ----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           86 ----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                          +++++|++||||++.    |+|+||++++++. ++++ |++++.. ++|++++++.|||++|.+.+++++|++|||
T Consensus       100 ~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~vlV  176 (351)
T 1yb5_A          100 EAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESVLV  176 (351)
T ss_dssp             EEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred             EEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHH-eEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEEEE
Confidence                788999999999986    7999999999998 9999 9996555 678899999999999987889999999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHH
Q 037444          158 SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDA  236 (339)
Q Consensus       158 ~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~  236 (339)
                      +|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+++ ++|++|||+|+..+..
T Consensus       177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~~~~~  254 (351)
T 1yb5_A          177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSK  254 (351)
T ss_dssp             ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChHHHHH
Confidence            999999999999999999999999999999999888 9999999999887 888889888877 8999999999988999


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCc
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGL  315 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l  315 (339)
                      ++++++++|+++.+|....       ...+...++.+++++.++..... ++...+.++.+.+++++|++++.+..+|++
T Consensus       255 ~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l  327 (351)
T 1yb5_A          255 DLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPL  327 (351)
T ss_dssp             HHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEG
T ss_pred             HHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcH
Confidence            9999999999999986321       22345567888999988765433 334456677788899999999989889999


Q ss_pred             ccHHHHHHH-hHcCCccceEEEEe
Q 037444          316 ENAPAALVG-LFTGRNVGKQLVAV  338 (339)
Q Consensus       316 ~~~~~a~~~-~~~~~~~gkvvv~~  338 (339)
                      +++++|++. +.++...||+|+++
T Consensus       328 ~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          328 EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999998 55667789999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-50  Score=365.12  Aligned_cols=317  Identities=21%  Similarity=0.224  Sum_probs=257.7

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      +|+|||++++++  +.|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|+ 
T Consensus         1 sm~mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V   72 (349)
T 4a27_A            1 SMEMRAVVLAGF--GGL--NKLRLFR--KAMP-EPQD-GELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIV   72 (349)
T ss_dssp             CCCEEEEEECSS--SSG--GGEEEEE--ECCC-CCCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEE
T ss_pred             CceeEEEEEccC--CCc--ceeEEEe--cCCC-CCCC-CEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEE
Confidence            368999999998  777  4566655  5556 3488 99999999999999999999997654456789999999999 


Q ss_pred             ----eCCCCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           86 ----LHIQNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                          +++++|++||||+++   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+
T Consensus        73 ~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~  149 (349)
T 4a27_A           73 EALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEF-VYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVLVH  149 (349)
T ss_dssp             EEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHH-eEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence                788999999999986   7999999999999 9999 9996655 6888999999999999888999999999999


Q ss_pred             cCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHH
Q 037444          159 AASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAV  237 (339)
Q Consensus       159 ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~  237 (339)
                      |++|++|++++|+|+.+| ++|++++ ++++.+.++  +|++++++ .+. ++.+.+++.+++++|+||||+|++.+..+
T Consensus       150 Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~  224 (349)
T 4a27_A          150 SAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDNTGKG  224 (349)
T ss_dssp             STTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-------
T ss_pred             cCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchhHHHH
Confidence            999999999999999995 5999988 566667664  89999999 665 89999999887799999999999888999


Q ss_pred             HHhhccCCEEEEEecccccCCCC-----------CccccchHHHHhccccccceecccc------cchhHHHHHHHHHHH
Q 037444          238 LLNMRLRGRIAVCGMISQYNLEK-----------PEGVHNLEQLIGKRIRLEGFLAGDY------YHLYPKFLELVIPAI  300 (339)
Q Consensus       238 ~~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l  300 (339)
                      +++|+++|+++.+|.........           .....+...++.+++++.++....+      .....+.++++++++
T Consensus       225 ~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~  304 (349)
T 4a27_A          225 LSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLY  304 (349)
T ss_dssp             CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHH
Confidence            99999999999998754221000           0012345667788888888776443      123367899999999


Q ss_pred             HcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          301 REGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       301 ~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++|++++.++.+|+++++++|++.+.+++..||+|++++
T Consensus       305 ~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~  343 (349)
T 4a27_A          305 NQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE  343 (349)
T ss_dssp             HTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred             HCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence            999999999999999999999999999999999999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.9e-50  Score=365.43  Aligned_cols=312  Identities=19%  Similarity=0.215  Sum_probs=263.9

Q ss_pred             ccccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCee
Q 037444            3 AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELK   82 (339)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~   82 (339)
                      +++|+++|||+++++.  +.|    +++++  .|.| .+++ +||+|||+++|||++|++.+.|... ...+|.++|||+
T Consensus         2 ~~~~~~tmkA~v~~~~--~~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~   70 (378)
T 3uko_A            2 TQGQVITCKAAVAYEP--NKP----LVIED--VQVA-PPQA-GEVRIKILYTALCHTDAYTWSGKDP-EGLFPCILGHEA   70 (378)
T ss_dssp             CTTSCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEE
T ss_pred             CcccceeeEEEEEecC--CCc----cEEEE--ecCC-CCCC-CeEEEEEEEeecCHHHHHHhcCCCC-CCCCCccCCccc
Confidence            4567899999999987  655    46655  5555 3478 9999999999999999999998653 345789999999


Q ss_pred             EEe-----eCCCCCCCCCEEEec----------------------------------------------------cceee
Q 037444           83 FWI-----LHIQNYAKDDLVWGS----------------------------------------------------TGWEE  105 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~  105 (339)
                      +|+     +++++|++||||++.                                                    |+|+|
T Consensus        71 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  150 (378)
T 3uko_A           71 AGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ  150 (378)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBS
T ss_pred             eEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEe
Confidence            999     788999999999853                                                    48999


Q ss_pred             EEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 037444          106 YSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAG  184 (339)
Q Consensus       106 ~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~  184 (339)
                      |++++++. ++++ |++++.. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus       151 y~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~  226 (378)
T 3uko_A          151 YTVVHDVS-VAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDI  226 (378)
T ss_dssp             EEEEEGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECS
T ss_pred             EEEechhh-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcC
Confidence            99999999 9999 9996655 688899999999999988899999999999997 9999999999999999 8999999


Q ss_pred             CHHHHHHHHHHhCCCeeeeCC--ChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCC
Q 037444          185 SKEKVDLLKNKFGFDDAFNYK--EEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEK  260 (339)
Q Consensus       185 ~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  260 (339)
                      ++++++.++ ++|+++++++.  +. ++.+.+++++++++|+||||+|+ ..+..++++++++ |+++.+|.....    
T Consensus       227 ~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~----  300 (378)
T 3uko_A          227 DSKKYETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG----  300 (378)
T ss_dssp             CTTHHHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----
T ss_pred             CHHHHHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC----
Confidence            999999999 99999999987  45 89999999998899999999998 5889999999996 999999975421    


Q ss_pred             CccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          261 PEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .........++. ++++.|+....+.  ..+.++++++++++|++++  .++.+|+|+++++|++.+.+++.. |+|+++
T Consensus       301 ~~~~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          301 QEISTRPFQLVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             CCEEECTHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEET
T ss_pred             CccccCHHHHhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEec
Confidence            112233444444 7888877655332  2567899999999999885  477889999999999999988766 999987


Q ss_pred             C
Q 037444          339 A  339 (339)
Q Consensus       339 ~  339 (339)
                      +
T Consensus       377 ~  377 (378)
T 3uko_A          377 S  377 (378)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.3e-50  Score=362.57  Aligned_cols=317  Identities=21%  Similarity=0.235  Sum_probs=266.1

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      +++.+|||+++.+.  |.|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|
T Consensus        18 ~~~~~Mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G   89 (354)
T 2j8z_A           18 LYFQSMLAVHFDKP--GGP--ENLYVKE--VAKP-SPGE-GEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASG   89 (354)
T ss_dssp             ---CEEEEEEESSC--SSG--GGEEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEE
T ss_pred             cchhheeEEEEccC--CCc--cceEEee--cCCC-CCCC-CeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEE
Confidence            46788999999887  666  4566654  5556 3478 9999999999999999999988654323468999999999


Q ss_pred             e-----eCC-CCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEE
Q 037444           85 I-----LHI-QNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYV  155 (339)
Q Consensus        85 ~-----~~v-~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~v  155 (339)
                      +     +++ ++|++||||+++   |+|+||++++++. ++++ |++++.. ++|+++.+++|||++|.+.+++++|++|
T Consensus        90 ~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~~v  166 (354)
T 2j8z_A           90 HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGL-LMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYV  166 (354)
T ss_dssp             EEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTCEE
T ss_pred             EEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHH-cEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCCEE
Confidence            9     788 899999999986   8999999999998 9999 9996554 6788999999999999888999999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhH
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKML  234 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~  234 (339)
                      ||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+.+ ++|++|||+|+..+
T Consensus       167 lV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G~~~~  244 (354)
T 2j8z_A          167 LIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYW  244 (354)
T ss_dssp             EESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCGGGH
T ss_pred             EEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCCchHH
Confidence            99999999999999999999999999999999999997 9999999999887 888999988876 89999999999999


Q ss_pred             HHHHHhhccCCEEEEEecccccCCCCCccccch-HHHHhccccccceecccccch-----hHHHHHHHHHHHHcC---Cc
Q 037444          235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGDYYHL-----YPKFLELVIPAIREG---KM  305 (339)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~l~~g---~~  305 (339)
                      ..++++|+++|+++.+|...+.     ....+. ..++.+++++.++........     ....++++++++++|   ++
T Consensus       245 ~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l  319 (354)
T 2j8z_A          245 EKNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRL  319 (354)
T ss_dssp             HHHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCC
T ss_pred             HHHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccc
Confidence            9999999999999999875432     123445 667789999988766543211     122345688999999   99


Q ss_pred             eeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          306 VYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       306 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++.+..+|+++++++|++.+.+++..||+|++++
T Consensus       320 ~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          320 LPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             CCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             cCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            8888889999999999999998888899999863

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.7e-50  Score=362.87  Aligned_cols=307  Identities=16%  Similarity=0.208  Sum_probs=261.6

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC-CCCCCCCCCCeeEE
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP-SFVDSFHPGELKFW   84 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~-~~~~p~~~G~e~~G   84 (339)
                      +|.+|||+++.++  ++|    ++++  +.|.| .+++ +||+|||.++|||++|++.+.|.... ...+|.++|||++|
T Consensus         4 ~~~~mka~~~~~~--~~~----l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G   73 (343)
T 3gaz_A            4 TTPTMIAAVVEEA--NGP----FVLR--KLARP-QPAP-GQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAG   73 (343)
T ss_dssp             --CEEEEEEECST--TCC----EEEE--EEECC-CCCT-TEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEE
T ss_pred             CchhheEEEEecC--CCc----eEEE--eccCC-CCCC-CEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEE
Confidence            3578999999987  655    4554  46666 3488 99999999999999999999886432 24578999999999


Q ss_pred             e-----eCCCCCCCCCEEEec--------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCC
Q 037444           85 I-----LHIQNYAKDDLVWGS--------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKK  151 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~--------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~  151 (339)
                      +     +++++|++||||+++        |+|+||++++++. ++++ |++++.. ++|+++.++.|||++|.+.+++++
T Consensus        74 ~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~  150 (343)
T 3gaz_A           74 TVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARL-LASK-PAALTMR-QASVLPLVFITAWEGLVDRAQVQD  150 (343)
T ss_dssp             EEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTCCCT
T ss_pred             EEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHH-eeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcCCCC
Confidence            9     788999999999875        7899999999999 9999 9996655 688889999999999988899999


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVG  230 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g  230 (339)
                      |++|||+||+|++|++++|+|+..|++|+++ .++++++.++ ++|++. ++ +.. ++.+.+++.+.+ ++|++|||+|
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEEESSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEEECCC
Confidence            9999999999999999999999999999999 7889999998 999988 77 555 889999998887 9999999999


Q ss_pred             hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc------cchhHHHHHHHHHHHHcCC
Q 037444          231 GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY------YHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l~~g~  304 (339)
                      ++.+..++++|+++|+++.+|...         ..+...++.+++++.++.....      +....+.++++++++++|+
T Consensus       226 ~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  296 (343)
T 3gaz_A          226 GPVLDASFSAVKRFGHVVSCLGWG---------THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGK  296 (343)
T ss_dssp             THHHHHHHHHEEEEEEEEESCCCS---------CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHhcCCeEEEEcccC---------ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCC
Confidence            999999999999999999998743         1245667788998888654321      2234578999999999999


Q ss_pred             ceeeee-eeeCcccHHHHHHHhHcCCc----cceEEEEeC
Q 037444          305 MVYVED-IAEGLENAPAALVGLFTGRN----VGKQLVAVA  339 (339)
Q Consensus       305 ~~~~~~-~~~~l~~~~~a~~~~~~~~~----~gkvvv~~~  339 (339)
                      +++.+. .+|+++++++|++.+.+++.    .||+|+++.
T Consensus       297 l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          297 LAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             CCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             cccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence            999888 68999999999999998765    689998863

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=7.4e-50  Score=358.72  Aligned_cols=301  Identities=19%  Similarity=0.225  Sum_probs=262.6

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +|||++++++  ++|    +++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+   
T Consensus         2 ~MkA~~~~~~--g~~----l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~   71 (340)
T 3s2e_A            2 MMKAAVVRAF--GAP----LTIDE--VPVP-QPGP-GQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSA   71 (340)
T ss_dssp             EEEEEEBCST--TSC----CEEEE--EECC-CCCT-TCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEE
T ss_pred             ceEEEEEecC--CCC----CEEEE--ccCC-CCCC-CeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEE
Confidence            4899999887  655    46654  5556 3478 99999999999999999999997654456789999999999   


Q ss_pred             --eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCcccccccc
Q 037444           86 --LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l  132 (339)
                        +++++|++||||+.                               .|+|+||++++++. ++++ |++++.. ++|++
T Consensus        72 vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l  148 (340)
T 3s2e_A           72 VGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNY-VGLL-PDKVGFV-EIAPI  148 (340)
T ss_dssp             ECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTSCHH-HHGGG
T ss_pred             ECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHH-EEEC-CCCCCHH-Hhhcc
Confidence              78999999999942                               27999999999999 9999 9996655 68889


Q ss_pred             CchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHH
Q 037444          133 GMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDA  212 (339)
Q Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  212 (339)
                      ++++.|||++| +..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+
T Consensus       149 ~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~  224 (340)
T 3s2e_A          149 LCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNARDT-DPAA  224 (340)
T ss_dssp             GTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHH
T ss_pred             cchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHH
Confidence            99999999999 6689999999999996 99999999999999999999999999999999 9999999999987 8888


Q ss_pred             HHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHH
Q 037444          213 ALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK  291 (339)
Q Consensus       213 ~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
                      .+++ +.+++|++||++|+ ..++.++++|+++|+++.+|....      ........++.+++++.++....     .+
T Consensus       225 ~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~  292 (340)
T 3s2e_A          225 WLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVGT-----RS  292 (340)
T ss_dssp             HHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HH
T ss_pred             HHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecCC-----HH
Confidence            8888 44589999999985 689999999999999999987542      13345677888999999987766     77


Q ss_pred             HHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       292 ~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .++++++++++|++++.+. .++|+++++|++.+.+++..||+|++++
T Consensus       293 ~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~  339 (340)
T 3s2e_A          293 DLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFS  339 (340)
T ss_dssp             HHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HHHHHHHHHHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecC
Confidence            8999999999999998655 4799999999999999999999999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.2e-51  Score=371.60  Aligned_cols=319  Identities=20%  Similarity=0.197  Sum_probs=263.6

Q ss_pred             CcccccccccceEEEe--eccCC-CCCCCCeEEEee-------cccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC
Q 037444            1 MAAEQEAVSNKRVILS--NYVTG-FPKESDMKITSG-------SIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP   70 (339)
Q Consensus         1 m~~~~~~~~~~a~~~~--~~~~~-~p~~~~~~~~~~-------~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~   70 (339)
                      |++-++|.+|||++++  ++  + .|  +.+++++.       ++|.| .+++ +||+|||+++|||++|++.+.|.+..
T Consensus         2 Ms~m~~p~~mka~~~~~~~~--~~~~--~~l~~~~~~~~~~~~~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~   75 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGY--TKTP--SGSALEAMEPYLEQGRIAVP-APGP-SQVLIKVNLASINPSDVAFIKGQYGQ   75 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBS--CSSC--CCSCCCCSTTTEEEEEEECC-CCCT-TEEEEEEEEEECCHHHHHHHTTCSSS
T ss_pred             CCCCCCchhheEEEEEcccc--CCCc--ccceEEEeecccccccCCCC-CCCC-CeEEEEEEEecCCHHHHHHhcccCCC
Confidence            6776788899999999  54  3 23  34444332       22667 4488 99999999999999999999987654


Q ss_pred             CCCCCCCCCCeeEEe-----eCC-CCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhh
Q 037444           71 SFVDSFHPGELKFWI-----LHI-QNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVT  138 (339)
Q Consensus        71 ~~~~p~~~G~e~~G~-----~~v-~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~t  138 (339)
                      ...+|.++|||++|+     ++| ++|++||||++.      |+|+||++++++. ++++ |++++.. ++|++++.++|
T Consensus        76 ~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~t  152 (349)
T 3pi7_A           76 PRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA-CIPL-LDTVRDE-DGAAMIVNPLT  152 (349)
T ss_dssp             CBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGG-EEEC-CTTCCC---GGGSSHHHHH
T ss_pred             CCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHH-eEEC-CCCCCHH-HHhhccccHHH
Confidence            456799999999999     677 889999999964      7999999999999 9999 9996665 68889999999


Q ss_pred             HHHHHHHhcCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEVCSPKKG-EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~~~~~~g-~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      ||+++ +.++ ++| ++|+|+||+|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+.+++.
T Consensus       153 a~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~  228 (349)
T 3pi7_A          153 AIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREV  228 (349)
T ss_dssp             HHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHH
T ss_pred             HHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHH
Confidence            99766 5556 666 79999999999999999999999999999999999999999 9999999999887 999999999


Q ss_pred             CCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccch-HHHHhccccccceecccc----cchhHH
Q 037444          218 FPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGDY----YHLYPK  291 (339)
Q Consensus       218 ~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~  291 (339)
                      +++ ++|++|||+|+..+..++++|+++|+++.+|.....     ....+. ..++.+++++.++....+    +....+
T Consensus       229 ~~~~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  303 (349)
T 3pi7_A          229 MKAEQPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPD-----ATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGP  303 (349)
T ss_dssp             HHHHCCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCS-----CCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHH
T ss_pred             hcCCCCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCC-----CCCCCchhhhhccccEEEEEEehhhhhhCcHHHHH
Confidence            887 999999999998889999999999999999875432     123444 778889999999887654    223456


Q ss_pred             HHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          292 FLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       292 ~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .++++++++++|++++.++.+|+++++++|++. .++...||+|+++
T Consensus       304 ~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~-~~~~~~gKvvl~p  349 (349)
T 3pi7_A          304 AILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPA-ELTKPNGKVFIRP  349 (349)
T ss_dssp             HHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHH-HHTSSSSCEEEEC
T ss_pred             HHHHHHHHHHcCCcccccceEEcHHHHHHHHHH-HhCCCCceEEEeC
Confidence            788999999999999999899999999999995 4455779999974

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.4e-49  Score=358.28  Aligned_cols=300  Identities=18%  Similarity=0.190  Sum_probs=260.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++...   .+  ..+++++  .|.| .++| +||||||.++|||++|++.+.|.+.  .++|.++|||++|+    
T Consensus         1 MKA~v~~~~---~~--~~~~l~e--~~~P-~~~p-~eVLVkv~a~gic~~D~~~~~G~~~--~~~p~i~GhE~aG~V~~v   69 (348)
T 4eez_A            1 MKAAVVRHN---PD--GYADLVE--KELR-AIKP-NEALLDMEYCGVCHTDLHVAAGDFG--NKAGTVLGHEGIGIVKEI   69 (348)
T ss_dssp             CEEEEECSS---CC--SSEEEEE--CCCC-CCCT-TEEEEEEEEEECCHHHHHHHTTTTC--CCTTCBCCSEEEEEEEEE
T ss_pred             CeEEEEEcC---CC--CcEEEEE--eECC-CCCC-CEEEEEEEEEEECHHHHHHhcCCCC--CCCCcccceeEEEEEEEE
Confidence            799999654   22  3356655  5556 4488 9999999999999999999998765  46789999999999    


Q ss_pred             -eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++|++|++||||++.                               |+|+||+.++++. ++++ |++++.. ++++++
T Consensus        70 G~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~-~~~i-P~~~~~~-~aa~l~  146 (348)
T 4eez_A           70 GADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADY-AVKV-PDGLDPI-EASSIT  146 (348)
T ss_dssp             CTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-SCBC-CTTSCHH-HHHHHH
T ss_pred             CceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccc-eeec-CCCCCHH-HHhhcc
Confidence             889999999999752                               6899999999999 9999 9996555 688999


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDA  212 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  212 (339)
                      .++.|||+++ +..++++|++|||+|+ |++|.+++|+|+.+ |++|++++++++++++++ ++|+++++|+++. ++.+
T Consensus       147 ~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~~-~~~~  222 (348)
T 4eez_A          147 CAGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTINSGDV-NPVD  222 (348)
T ss_dssp             HHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEEC-CC-CHHH
T ss_pred             cceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEeCCCC-CHHH
Confidence            9999999999 5688999999999997 99999999999876 679999999999999999 9999999999997 9999


Q ss_pred             HHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhH
Q 037444          213 ALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP  290 (339)
Q Consensus       213 ~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (339)
                      ++++.+++ ++|.++|++++ ..+..++++++++|+++.+|....      ....+...++.+++++.|+...+     +
T Consensus       223 ~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~-----~  291 (348)
T 4eez_A          223 EIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGSLVGT-----R  291 (348)
T ss_dssp             HHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEECCSCC-----H
T ss_pred             HhhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEEecCC-----H
Confidence            99999998 99999999986 588999999999999999987543      23456778889999999987766     6


Q ss_pred             HHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          291 KFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       291 ~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ..++++++++++|++++.+ .+|+|+++++|++.+++++..||+|++|+
T Consensus       292 ~~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          292 LDLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             HHHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence            7799999999999999755 57899999999999999999999999974

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.8e-51  Score=363.69  Aligned_cols=308  Identities=17%  Similarity=0.140  Sum_probs=261.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||++++++  |+|  +.  ++..+.|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+   .
T Consensus         1 MkA~~~~~~--g~~--~~--l~~~~~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~   72 (324)
T 3nx4_A            1 MQALILEQQ--DGK--TL--ASVQHLEES-QLPA-GDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHAS   72 (324)
T ss_dssp             CEEEEEEES--SSS--EE--EEEEECCGG-GSCC-CSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEE
T ss_pred             CceEEEecC--CCC--ce--eeEeecCCC-CCCC-CEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEe
Confidence            799999998  877  33  444556667 4488 99999999999999999999987654456789999999999   6


Q ss_pred             CCCCCCCCCEEEe---------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH--hcCCCCCC-E
Q 037444           87 HIQNYAKDDLVWG---------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKKGE-Y  154 (339)
Q Consensus        87 ~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~g~-~  154 (339)
                      ++++|++||||++         .|+|+||++++++. ++++ |++++.. ++|+++..+.|||++|+.  ..++++++ +
T Consensus        73 Gv~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~g~  149 (324)
T 3nx4_A           73 EDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDW-LVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQDGE  149 (324)
T ss_dssp             SSTTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGGCC
T ss_pred             CCCCCCCCCEEEEcccccCCCCCCceeeEEecCHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCCCCCe
Confidence            7889999999995         38999999999999 9999 9996655 688999999999999863  35577643 4


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKML  234 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~  234 (339)
                      |||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++|+++. +.   +++++++++|++|||+|++.+
T Consensus       150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d~~g~~~~  224 (324)
T 3nx4_A          150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWAGAIDTVGDKVL  224 (324)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEESSCHHHH
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEECCCcHHH
Confidence            999999999999999999999999999999999999999 9999999998764 43   555555699999999999999


Q ss_pred             HHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       235 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ..++++|+++|+++.+|.....     ....+...++.+++++.++..... +....+.++++++++++|++++. ..+|
T Consensus       225 ~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~~~  298 (324)
T 3nx4_A          225 AKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-ATEI  298 (324)
T ss_dssp             HHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EEEE
T ss_pred             HHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ceeE
Confidence            9999999999999999875432     123456678889999999876443 33445778999999999999887 8889


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEeC
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +++++++|++.+.+++..||+|++++
T Consensus       299 ~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          299 TLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             EGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             eHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99999999999999999999999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.7e-49  Score=360.69  Aligned_cols=310  Identities=17%  Similarity=0.165  Sum_probs=259.4

Q ss_pred             CcccccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCC
Q 037444            1 MAAEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGE   80 (339)
Q Consensus         1 m~~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~   80 (339)
                      |.+...|++|||+++.+.  +++    +++++  +|.| .+++ +||+|||+++|||++|++.+.|.+.  ..+|.++||
T Consensus         1 ~~~~~~p~~mka~~~~~~--g~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~Gh   68 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEP--HKP----LSLET--ITVA-PPKA-HEVRIKILASGICGSDSSVLKEIIP--SKFPVILGH   68 (373)
T ss_dssp             -CCTTSCEEEEEEEBSST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCC
T ss_pred             CcccCCcceeEEEEEEcC--CCC----eeEEE--eeCC-CCCC-CeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCc
Confidence            777788999999999886  544    46654  5556 3477 9999999999999999999988553  456899999


Q ss_pred             eeEEe-----eCCCCCCCCCEEEec---------------------------------------------------ccee
Q 037444           81 LKFWI-----LHIQNYAKDDLVWGS---------------------------------------------------TGWE  104 (339)
Q Consensus        81 e~~G~-----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~  104 (339)
                      |++|+     ++|++|++||||++.                                                   |+|+
T Consensus        69 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  148 (373)
T 1p0f_A           69 EAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFT  148 (373)
T ss_dssp             CEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSB
T ss_pred             CceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccce
Confidence            99999     788999999999853                                                   7899


Q ss_pred             eEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe
Q 037444          105 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSA  183 (339)
Q Consensus       105 ~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~  183 (339)
                      ||++++++. ++++ |++++.  ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       149 ey~~v~~~~-~~~i-P~~l~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~  223 (373)
T 1p0f_A          149 EYTVVADIA-VAKI-DPKAPL--ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVG  223 (373)
T ss_dssp             SEEEEETTS-EEEE-CTTCCG--GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             eEEEEchhh-EEEC-CCCCCh--hhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            999999999 9999 999554  466788899999999988899999999999995 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHhCCCeeeeCCC--hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCC
Q 037444          184 GSKEKVDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLE  259 (339)
Q Consensus       184 ~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  259 (339)
                      +++++++.++ ++|+++++++++  . ++.+.+++.+++++|+||||+|+ ..+..++++++++ |+++.+|.....   
T Consensus       224 ~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~---  298 (373)
T 1p0f_A          224 THKDKFPKAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN---  298 (373)
T ss_dssp             SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT---
T ss_pred             CCHHHHHHHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCC---
Confidence            9999999999 999999999874  4 78899999887799999999997 6889999999999 999999875421   


Q ss_pred             CCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          260 KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                       .....+...++.++ ++.|+....+.   .+.++++++++++|++++  .+..+|+|+++++|++.+.+++. +|++++
T Consensus       299 -~~~~~~~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~  372 (373)
T 1p0f_A          299 -ERLPLDPLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMI  372 (373)
T ss_dssp             -CCEEECTHHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEE
T ss_pred             -CccccCHHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEe
Confidence             11233445566677 88877654321   256889999999999874  56778999999999999988764 699987


Q ss_pred             e
Q 037444          338 V  338 (339)
Q Consensus       338 ~  338 (339)
                      +
T Consensus       373 ~  373 (373)
T 1p0f_A          373 Y  373 (373)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8.5e-49  Score=354.15  Aligned_cols=331  Identities=33%  Similarity=0.529  Sum_probs=270.1

Q ss_pred             ccccccccceEEEeecc--CCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCC----CCCCCCCCC
Q 037444            3 AEQEAVSNKRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL----DRPSFVDSF   76 (339)
Q Consensus         3 ~~~~~~~~~a~~~~~~~--~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~----~~~~~~~p~   76 (339)
                      .+.||++|||+++....  .|.|.++.+++++  .|.|.+.++ +||+|||.++|||++|++.+.+.    +.....+|.
T Consensus         2 ~~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~--~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~   78 (357)
T 2zb4_A            2 AAAAAMIVQRVVLNSRPGKNGNPVAENFRMEE--VYLPDNINE-GQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQ   78 (357)
T ss_dssp             ----CCEEEEEEECCCCCTTSCCCGGGEEEEE--EECCSCCCT-TEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTS
T ss_pred             CCcccccceEEEEeccCCCCCCCCcCceEEEe--ecCCCCCCC-CeEEEEEEEEecCHHHHhhccccccccccCCCCCCc
Confidence            35578999999994321  1445335667755  555633277 99999999999999999877652    211235678


Q ss_pred             CCCCeeEEe---eCCCCCCCCCEEEec-cceeeEEEecCccceeeccCCCC---CccccccccCchhhhHHHHHHHhcCC
Q 037444           77 HPGELKFWI---LHIQNYAKDDLVWGS-TGWEEYSLVTAPQLLIKIQHTDV---PLSYYTGILGMPGVTAYAGLYEVCSP  149 (339)
Q Consensus        77 ~~G~e~~G~---~~v~~~~~Gd~V~~~-g~~~~~~~v~~~~~~~~i~p~~~---~~~~~aa~l~~~~~tA~~~l~~~~~~  149 (339)
                      ++|||++|+   +++++|++||||++. |+|+||++++++. ++++ |+++   +.++++++++++++|||+++.+.+++
T Consensus        79 v~G~E~~G~V~~~~v~~~~vGdrV~~~~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~  156 (357)
T 2zb4_A           79 VVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNS-LEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHI  156 (357)
T ss_dssp             BCEEEEEEEEEEECSTTCCTTCEEEEEEEESBSEEEEEGGG-CEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCC
T ss_pred             cccccEEEEEEecCCCCCCCCCEEEecCCCcEEEEEEchHH-ceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCC
Confidence            999999999   788899999999987 6999999999998 9999 9985   22556789999999999999888999


Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          150 KKG--EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       150 ~~g--~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      ++|  ++|||+|++|++|++++|+|+..|+ +|+++++++++++.+++++|++.++++++. ++.+.+++.+.+++|++|
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi  235 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYF  235 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEE
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEE
Confidence            999  9999999999999999999999999 999999999999988834999999999886 888899988876899999


Q ss_pred             ECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccc-c---chHHHHhccccccceecccccchhHHHHHHHHHHHHc
Q 037444          227 ENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGV-H---NLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIRE  302 (339)
Q Consensus       227 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  302 (339)
                      ||+|+..+..++++|+++|+++.+|.........+... .   ....++.+++++.++....+.....+.++++++++++
T Consensus       236 ~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~  315 (357)
T 2zb4_A          236 DNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKE  315 (357)
T ss_dssp             ESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHT
T ss_pred             ECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHc
Confidence            99999899999999999999999997654211111000 0   0246778899998887655544557789999999999


Q ss_pred             CCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          303 GKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       303 g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      |++++.+..+|+|+++++|++.+.+++..||+|++++
T Consensus       316 g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  352 (357)
T 2zb4_A          316 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCIS  352 (357)
T ss_dssp             TCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECC
T ss_pred             CCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEe
Confidence            9999988888999999999999999888899999873

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-49  Score=357.08  Aligned_cols=307  Identities=19%  Similarity=0.206  Sum_probs=261.2

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      +++|||+++++.  +.+    +++++  .|.| .+++ +||+|||.++|||++|++.+.|.+.  ..+|.++|||++|+ 
T Consensus         4 ~~~mka~~~~~~--g~~----l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V   71 (371)
T 1f8f_A            4 LKDIIAAVTPCK--GAD----FELQA--LKIR-QPQG-DEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGII   71 (371)
T ss_dssp             CEEEEEEEBCST--TCC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEE
T ss_pred             cccceEEEEcCC--CCC----eEEEE--ecCC-CCCC-CEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEE
Confidence            467999999886  544    46654  5556 3478 9999999999999999999988653  35689999999999 


Q ss_pred             ----eCCCCCCCCCEEEe----------------------------------------------------ccceeeEEEe
Q 037444           86 ----LHIQNYAKDDLVWG----------------------------------------------------STGWEEYSLV  109 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~----------------------------------------------------~g~~~~~~~v  109 (339)
                          ++|++|++||||++                                                    .|+|+||+++
T Consensus        72 ~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v  151 (371)
T 1f8f_A           72 EAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALS  151 (371)
T ss_dssp             EEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEE
T ss_pred             EEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEe
Confidence                78899999999985                                                    1689999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK  188 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~  188 (339)
                      +++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       152 ~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~  227 (371)
T 1f8f_A          152 RENN-TVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR  227 (371)
T ss_dssp             EGGG-EEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             chhh-eEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHH
Confidence            9999 9999 9996665 678889999999999988889999999999995 9999999999999999 79999999999


Q ss_pred             HHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccch
Q 037444          189 VDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL  267 (339)
Q Consensus       189 ~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~  267 (339)
                      ++.++ ++|+++++++++. ++.+.+++.+++++|+|||++|. ..+..++++|+++|+++.+|.....    .....+.
T Consensus       228 ~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~  301 (371)
T 1f8f_A          228 LELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDV  301 (371)
T ss_dssp             HHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCH
T ss_pred             HHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----CccccCH
Confidence            99998 9999999999887 89999999887799999999997 6889999999999999999875421    1123455


Q ss_pred             HHHHhccccccceecccccchhHHHHHHHHHHHHcCCceee--eeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          268 EQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYV--EDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ..++.+++++.++......  ..+.++++++++++|++++.  +.. |+|+++++|++.+.+++. +|+|++++
T Consensus       302 ~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          302 NDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             HHHHHTTCEEEECSGGGSC--HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             HHHHhCCCEEEEeCCCCCc--hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence            6778889999887654321  24678999999999999863  666 999999999999998875 79999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.6e-49  Score=358.94  Aligned_cols=311  Identities=14%  Similarity=0.096  Sum_probs=261.5

Q ss_pred             cccccceEEEeeccCCC-CCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            6 EAVSNKRVILSNYVTGF-PKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~-p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      ++++|||++++++  +. ..+..+++++  .|.| .+++ +||+|||.++|||++|++.+.|.... ..+|.++|||++|
T Consensus        19 ~m~~MkA~~~~~~--~~~~~~~~l~~~~--~p~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G   91 (363)
T 4dvj_A           19 YFQSMKAVGYNKP--APITDDASLLDIE--LPKP-APAG-HDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAG   91 (363)
T ss_dssp             CCCEEEEEEBSSC--CCTTSTTSSEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEE
T ss_pred             hhheeEEEEEecc--CCCCCCceEEEee--cCCC-CCCC-CEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEE
Confidence            4588999999886  32 1225666654  5556 3478 99999999999999999999886542 4578999999999


Q ss_pred             e-----eCCCCCCCCCEEEec------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCC---
Q 037444           85 I-----LHIQNYAKDDLVWGS------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPK---  150 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~---  150 (339)
                      +     +++++|++||||++.      |+|+||++++++. ++++ |++++.. ++|+++++++|||++|.+.++++   
T Consensus        92 ~V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~  168 (363)
T 4dvj_A           92 IVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERI-VGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNKPV  168 (363)
T ss_dssp             EEEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGG-CEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTSCC
T ss_pred             EEEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHH-eeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCcCc
Confidence            9     788999999999975      7999999999998 9999 9996655 68888999999999998888998   


Q ss_pred             --CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 --KGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 --~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                        +|++|||+||+|++|++++|+|+.+ |++|+++++++++++.++ ++|+++++++++  ++.+.+++..++++|+|||
T Consensus       169 ~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvvid  245 (363)
T 4dvj_A          169 PGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFS  245 (363)
T ss_dssp             TTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEEEE
Confidence              8999999999999999999999984 889999999999999999 999999999875  7888888884459999999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-------cchhHHHHHHHHHH
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-------YHLYPKFLELVIPA  299 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~  299 (339)
                      |+|+. .+..++++|+++|+++.+|...         ..+...++.+++++.++.....       .....+.+++++++
T Consensus       246 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  316 (363)
T 4dvj_A          246 TTHTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRL  316 (363)
T ss_dssp             CSCHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHH
Confidence            99985 8899999999999999986422         2334456677888776554321       11225678999999


Q ss_pred             HHcCCceeeeeeee---CcccHHHHHHHhHcCCccceEEEEe
Q 037444          300 IREGKMVYVEDIAE---GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       300 l~~g~~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++|++++.+..++   +++++++|++.+.+++..||+|+++
T Consensus       317 ~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          317 VDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            99999999888766   9999999999999999999999986

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.2e-49  Score=354.42  Aligned_cols=301  Identities=24%  Similarity=0.203  Sum_probs=253.6

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC----CCCCCCCCCCCee
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR----PSFVDSFHPGELK   82 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~----~~~~~p~~~G~e~   82 (339)
                      +++|||+++.++  |.|  +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|...    ....+|.++|||+
T Consensus         4 m~~Mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~   75 (321)
T 3tqh_A            4 MKEMKAIQFDQF--GPP--KVLKLVD--TPTP-EYRK-NQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDF   75 (321)
T ss_dssp             -CEEEEEEESSS--CSG--GGEEEEE--EECC-CCCT-TCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEE
T ss_pred             cccceEEEEccC--CCc--ceeEEEe--cCCC-CCCC-CEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCccccee
Confidence            368999999998  777  5566655  4555 3478 9999999999999999999888321    1245689999999


Q ss_pred             EEe-----eCCCCCCCCCEEEec-------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCC
Q 037444           83 FWI-----LHIQNYAKDDLVWGS-------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPK  150 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~~-------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~  150 (339)
                      +|+     +++++|++||||+++       |+|+||++++++. ++++ |++++.. ++|++++++.|||+++ +.++++
T Consensus        76 ~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~  151 (321)
T 3tqh_A           76 SGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDT-IIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAEVK  151 (321)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGG-EEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTTCC
T ss_pred             EEEEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHH-hccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcCCC
Confidence            999     788999999999875       7899999999999 9999 9996655 6888899999999999 789999


Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh-HHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD-LDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|++|||+||+|++|++++|+|+.+|++|++++ ++++.+.++ ++|+++++|+++. + +.+.+     +++|+||||+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~d~~  223 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAVIDLV  223 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEEEESS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEEEECC
Confidence            999999999999999999999999999999998 566688888 9999999999886 5 54443     4799999999


Q ss_pred             ChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeee
Q 037444          230 GGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVE  309 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~  309 (339)
                      |++....++++|+++|+++.+|.....        .....+..+++++.++....    ..+.++++++++++|++++.+
T Consensus       224 g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~i  291 (321)
T 3tqh_A          224 GGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQF----NIEELHYLGKLVSEDKLRIEI  291 (321)
T ss_dssp             CHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCCC----CHHHHHHHHHHHHTTSSCCCE
T ss_pred             CcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecCC----CHHHHHHHHHHHHCCCccccc
Confidence            998789999999999999998763221        12234556777777743222    267799999999999999999


Q ss_pred             eeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          310 DIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       310 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ..+|+++++++|++.+.+++..||+|++++
T Consensus       292 ~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          292 SRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             EEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            999999999999999999999999999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=5.9e-50  Score=361.50  Aligned_cols=316  Identities=20%  Similarity=0.238  Sum_probs=259.0

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      .|+.+|||+++.+.  |.|. +.+.++  +.|.| .+++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|
T Consensus        22 ~m~~~mka~~~~~~--g~~~-~~l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G   94 (357)
T 1zsy_A           22 SMPARVRALVYGHH--GDPA-KVVELK--NLELA-AVRG-SDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVA   94 (357)
T ss_dssp             CCCCCEEEEEESSS--SCHH-HHEEEE--EECCC-CCCT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEE
T ss_pred             hCchhhEEEEEecC--CCcc-ceEEEe--eccCC-CCCC-CEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEE
Confidence            36778999999887  6651 224554  45666 3488 9999999999999999999988654333468999999999


Q ss_pred             e-----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEE
Q 037444           85 I-----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYV  155 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~v  155 (339)
                      +     +++++|++||||++.    |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|
T Consensus        95 ~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~~V  171 (357)
T 1zsy_A           95 QVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEA-LIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGDSV  171 (357)
T ss_dssp             EEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGG-EEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTCEE
T ss_pred             EEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHH-cEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCCEE
Confidence            9     788899999999976    8999999999998 9999 9996555 6888898999999999888899999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC--CccEEEECC
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ--GIDIYFENV  229 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g--~~d~vid~~  229 (339)
                      ||+|++|++|++++|+||.+|++|++++++.    ++.+.++ ++|+++++++++  ...+.+.+.+.+  ++|+||||+
T Consensus       172 lV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~~~~~Dvvid~~  248 (357)
T 1zsy_A          172 IQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEE--LRRPEMKNFFKDMPQPRLALNCV  248 (357)
T ss_dssp             EESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHH--HHSGGGGGTTSSSCCCSEEEESS
T ss_pred             EEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCc--chHHHHHHHHhCCCCceEEEECC
Confidence            9999999999999999999999998888653    3467888 999999998653  222345566554  599999999


Q ss_pred             ChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-----cchhHHHHHHHHHHHHcCC
Q 037444          230 GGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~  304 (339)
                      |+.....++++++++|+++.+|.....     ....+...++.+++++.++....+     +....+.++++++++++|+
T Consensus       249 g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  323 (357)
T 1zsy_A          249 GGKSSTELLRQLARGGTMVTYGGMAKQ-----PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQ  323 (357)
T ss_dssp             CHHHHHHHHTTSCTTCEEEECCCCTTC-----CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHhhCCCCEEEEEecCCCC-----CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCC
Confidence            988778899999999999999864321     123445667789999998876543     2223567899999999999


Q ss_pred             ceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          305 MVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       305 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++.+..+|+++++++|++.+.+++..||+|+++
T Consensus       324 l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          324 LTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             SCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            9988878899999999999999888889999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=3.9e-49  Score=356.50  Aligned_cols=321  Identities=26%  Similarity=0.379  Sum_probs=268.2

Q ss_pred             cccccceEEEeeccCCCCCCCCeEE-EeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKI-TSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~-~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      ++.+|||++++++  |.+-.+.+++ +  +.|.|. +++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|
T Consensus        20 ~~~~MkA~~~~~~--g~~~~~~l~~~~--~~p~P~-~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G   93 (362)
T 2c0c_A           20 FQSMMQKLVVTRL--SPNFREAVTLSR--DCPVPL-PGD-GDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG   93 (362)
T ss_dssp             HCCEEEEEEECSC--CSSHHHHEEEEE--EEECCC-CCT-TEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEE
T ss_pred             chhhceEEEEeec--CCCccceeEEEe--ecCCCC-CCC-CeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEE
Confidence            5678999999887  5431123555 4  456664 478 9999999999999999999988654334578999999999


Q ss_pred             e-----eCCC-CCCCCCEEEec--cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           85 I-----LHIQ-NYAKDDLVWGS--TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        85 ~-----~~v~-~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                      +     ++++ +|++||||++.  |+|+||++++++. ++++ |+.  .. ++|+++.+++|||+++.+.+++++|++||
T Consensus        94 ~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g~~Vl  168 (362)
T 2c0c_A           94 EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASI-ATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEGKKVL  168 (362)
T ss_dssp             EEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGG-CEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEE
T ss_pred             EEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHH-eEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCCCEEE
Confidence            9     6788 99999999985  8999999999998 9999 986  33 78899999999999998888999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDA  236 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~  236 (339)
                      |+||+|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+.+++.+++++|++|||+|+..+..
T Consensus       169 V~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~  246 (362)
T 2c0c_A          169 VTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDL  246 (362)
T ss_dssp             ETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHHHHH
T ss_pred             EeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHHHHH
Confidence            9999999999999999999999999999999999999 8999999999886 8888888887558999999999989999


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCcc----ccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeee--
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEG----VHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVED--  310 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~--  310 (339)
                      ++++++++|+++.+|............    ......++.+++++.|+....+.....+.++++++++++|++++.+.  
T Consensus       247 ~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  326 (362)
T 2c0c_A          247 AVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLG  326 (362)
T ss_dssp             HHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECS
T ss_pred             HHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccc
Confidence            999999999999999765431100000    01135677889999888765544445678999999999999998765  


Q ss_pred             ------eeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          311 ------IAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       311 ------~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                            ..++++++++|++.+.+++..||+|++++
T Consensus       327 ~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  361 (362)
T 2c0c_A          327 DLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP  361 (362)
T ss_dssp             TTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred             cccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence                  45799999999999999888899999864

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.9e-49  Score=355.13  Aligned_cols=312  Identities=19%  Similarity=0.234  Sum_probs=262.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCC-CCC-CCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLD-RPS-FVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~-~~~-~~~p~~~G~e~~G~--   85 (339)
                      |||++++++  |.|  +.++++  +.|.|. +++ +||+|||.++|||++|++.+.|.+ ... ..+|.++|||++|+  
T Consensus         2 Mka~~~~~~--g~~--~~l~~~--~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~   73 (333)
T 1wly_A            2 VMAAVIHKK--GGP--DNFVWE--EVKVGS-PGP-GQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVE   73 (333)
T ss_dssp             CEEEEESSC--SSG--GGEEEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEE
T ss_pred             cEEEEEccc--CCc--ceeEEE--eccCCC-CCC-CeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEE
Confidence            799999887  766  456665  456663 478 999999999999999999998854 111 34689999999999  


Q ss_pred             ---eCCCCCCCCCEEEe----ccceeeEEEecCccceeeccCCCCCcccc--ccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 ---LHIQNYAKDDLVWG----STGWEEYSLVTAPQLLIKIQHTDVPLSYY--TGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~----~g~~~~~~~v~~~~~~~~i~p~~~~~~~~--aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                         +++++|++||||++    .|+|+||++++++. ++++ |++++.. +  +|+++.+++|||+++.+.+++++|++||
T Consensus        74 ~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vl  150 (333)
T 1wly_A           74 EVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEK-LIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVL  150 (333)
T ss_dssp             EECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGG-CEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred             EECCCCCCCCCCCEEEEecCCCCcceeEEEecHHH-cEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCEEE
Confidence               78899999999977    48999999999998 9999 9996655 6  7899999999999998788999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLD  235 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~  235 (339)
                      |+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+.+ ++|++|||+|+..+.
T Consensus       151 V~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g~~~~~  228 (333)
T 1wly_A          151 IHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQ  228 (333)
T ss_dssp             ETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSCTTTHH
T ss_pred             EECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCcHHHHH
Confidence            9999999999999999999999999999999999998 8999999998886 888889888766 899999999999999


Q ss_pred             HHHHhhccCCEEEEEecccccCCCCCccccchH-HHHhcc--ccccceecccc--cchhHHHHHHHHHHHHcCCceeeee
Q 037444          236 AVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLE-QLIGKR--IRLEGFLAGDY--YHLYPKFLELVIPAIREGKMVYVED  310 (339)
Q Consensus       236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~l~~~~~~l~~g~~~~~~~  310 (339)
                      .++++++++|+++.+|...+.     ....+.. .++.++  +++.|+....+  +....+.++++++++++|++++.+.
T Consensus       229 ~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~  303 (333)
T 1wly_A          229 KSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVA  303 (333)
T ss_dssp             HHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEE
T ss_pred             HHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcc
Confidence            999999999999999875432     1223444 566788  88888754221  2223567899999999999999888


Q ss_pred             eeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          311 IAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       311 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .+|+++++++|++.+.+++..||+|++++
T Consensus       304 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  332 (333)
T 1wly_A          304 KTFPLREAAAAHKYMGGRQTIGSIVLLPQ  332 (333)
T ss_dssp             EEEEGGGHHHHHHHHHHCSCCSEEEEETT
T ss_pred             eEEeHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            89999999999999999888899999864

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.9e-50  Score=363.29  Aligned_cols=316  Identities=17%  Similarity=0.227  Sum_probs=259.3

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeeccccccc-CCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCC---------C
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVA-EGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDS---------F   76 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~-~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p---------~   76 (339)
                      +++|||++++++  |.|. +.+++++  .|.|.+ +++ +||+|||+++|||++|++.+.|.+.....+|         .
T Consensus         1 ~~~mka~~~~~~--g~~~-~~l~~~~--~~~P~p~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~   74 (364)
T 1gu7_A            1 MITAQAVLYTQH--GEPK-DVLFTQS--FEIDDDNLAP-NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAA   74 (364)
T ss_dssp             CEEEEEEEESSC--SCHH-HHCEEEE--EEECTTSCCT-TEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBE
T ss_pred             CceEEEEEeccC--CCch-heeEEee--ccCCCCCCCC-CeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccc
Confidence            467999999887  6541 2356655  444433 237 9999999999999999999988654222345         8


Q ss_pred             CCCCeeEEe-----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCC-----------CCCccccccccCchh
Q 037444           77 HPGELKFWI-----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHT-----------DVPLSYYTGILGMPG  136 (339)
Q Consensus        77 ~~G~e~~G~-----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~-----------~~~~~~~aa~l~~~~  136 (339)
                      ++|||++|+     +++++|++||||++.    |+|+||++++++. ++++ |+           +++.. ++|++++++
T Consensus        75 i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~~~  151 (364)
T 1gu7_A           75 PCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNPAQSKANGKPNGLTIN-QGATISVNP  151 (364)
T ss_dssp             ECCSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCHHHHHHTTCSCCCCHH-HHHTCTTHH
T ss_pred             ccCceeEEEEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHH-eEEc-CCccccccccccCCCCHH-HHhhccccH
Confidence            999999999     788999999999976    8999999999998 9999 98           75554 688899999


Q ss_pred             hhHHHHHHHhcCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH----HHHHHHHhCCCeeeeCCC---hh
Q 037444          137 VTAYAGLYEVCSPKKG-EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK----VDLLKNKFGFDDAFNYKE---EP  208 (339)
Q Consensus       137 ~tA~~~l~~~~~~~~g-~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~----~~~~~~~~g~~~v~~~~~---~~  208 (339)
                      +|||++|.+.+++++| ++|||+|++|++|++++|+|+.+|++|++++++.++    ++.++ ++|+++++++++   . 
T Consensus       152 ~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-  229 (364)
T 1gu7_A          152 LTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSR-  229 (364)
T ss_dssp             HHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCG-
T ss_pred             HHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchH-
Confidence            9999999776799999 999999999999999999999999999999866543    57777 999999999875   4 


Q ss_pred             hHHHHHHHhC--CC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          209 DLDAALKRCF--PQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       209 ~~~~~v~~~~--~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                      ++.+.+++.+  ++ ++|+||||+|+.....++++++++|+++.+|.....     ....+...++.+++++.++....+
T Consensus       230 ~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~  304 (364)
T 1gu7_A          230 EFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWVTEL  304 (364)
T ss_dssp             GGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCHHHH
T ss_pred             HHHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCcEEEEEchhHh
Confidence            7888898887  44 899999999987767999999999999999875432     123445667789999988776543


Q ss_pred             ----cchhHHHHHHHHHHHHcCCceeeeeeeeCc---ccHHHHHHHhHcCCccceEEEEe
Q 037444          286 ----YHLYPKFLELVIPAIREGKMVYVEDIAEGL---ENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       286 ----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l---~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                          +....+.++++++++++|++++.+..++++   +++++|++.+.+++..||+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          305 LKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence                222356789999999999999877777766   59999999999988899999975

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.1e-49  Score=356.05  Aligned_cols=307  Identities=22%  Similarity=0.292  Sum_probs=264.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +.|  +.++++  +.|.|. +++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+    
T Consensus         1 Mka~~~~~~--g~~--~~l~~~--~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~v   72 (343)
T 2eih_A            1 MRAVVMRAR--GGP--EVLEVA--DLPVPE-PGP-KEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAV   72 (343)
T ss_dssp             CEEEEECSS--SSG--GGEEEE--ECCCCC-CCT-TEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEE
T ss_pred             CeEEEEecC--CCC--ceEEEE--ecCCCC-CCC-CEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEE
Confidence            689999887  666  445665  456663 478 99999999999999999999886542235689999999999    


Q ss_pred             -eCCCCCCCCCEEE-------e--------------------c---cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVW-------G--------------------S---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~-------~--------------------~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       +++++|++||||+       +                    +   |+|+||++++++. ++++ |++++.. ++|+++.
T Consensus        73 G~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~~  149 (343)
T 2eih_A           73 GPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEAN-LAPK-PKNLSFE-EAAAIPL  149 (343)
T ss_dssp             CSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHHHSHH
T ss_pred             CCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHH-eEEC-CCCCCHH-HHhhchh
Confidence             7889999999999       4                    2   7899999999998 9999 9995554 5777999


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      ++.|||+++.+.+++++|++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. ++.+.+
T Consensus       150 ~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~  227 (343)
T 2eih_A          150 TFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-DWPKEV  227 (343)
T ss_dssp             HHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTST-THHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCcc-cHHHHH
Confidence            99999999976679999999999999999999999999999999999999999999998 8999999998886 888889


Q ss_pred             HHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHH
Q 037444          215 KRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFL  293 (339)
Q Consensus       215 ~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  293 (339)
                      ++.+++ ++|++||++|...+..++++|+++|+++.+|.....     ....+...++.+++++.|+....     .+.+
T Consensus       228 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~~~  297 (343)
T 2eih_A          228 RRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KSRL  297 (343)
T ss_dssp             HHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GGGH
T ss_pred             HHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HHHH
Confidence            988876 899999999987899999999999999999875432     11234456778899988876433     5668


Q ss_pred             HHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          294 ELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       294 ~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +++++++++|++++.+..+|+|+++++|++.+.+++..||+|+++.
T Consensus       298 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (343)
T 2eih_A          298 FPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG  343 (343)
T ss_dssp             HHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEECC
T ss_pred             HHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEecC
Confidence            9999999999999988889999999999999999888899999863

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-49  Score=357.50  Aligned_cols=301  Identities=19%  Similarity=0.233  Sum_probs=255.0

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEE
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFW   84 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G   84 (339)
                      +++|||++++++  +.+    ++++  +.|.|..+++ +||+|||.++|||++|++.+.|.+..  ...+|.++|||++|
T Consensus        13 ~~~mka~~~~~~--g~~----l~~~--~~p~P~~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G   83 (359)
T 1h2b_A           13 VERLKAARLHEY--NKP----LRIE--DVDYPRLEGR-FDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG   83 (359)
T ss_dssp             ----CEEEESST--TSC----CEEE--CCCCCCCBTT-BCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEE
T ss_pred             hhhceEEEEecC--CCC----cEEE--EccCCCCCCC-CEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceE
Confidence            578999999886  544    4554  5666741478 99999999999999999999885420  22568999999999


Q ss_pred             e-----eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccc
Q 037444           85 I-----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                      +     +++++|++||||+++                              |+|+||++++++. ++++ |++++.. ++
T Consensus        84 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~a  160 (359)
T 1h2b_A           84 YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDISRE-KL  160 (359)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCHH-HH
T ss_pred             EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHh-EEEC-CCCCCHH-HH
Confidence            9     788999999999753                              7899999999998 9999 9996554 56


Q ss_pred             c---ccCchhhhHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          130 G---ILGMPGVTAYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       130 a---~l~~~~~tA~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      |   ++++++.|||+++.+. +++++|++|||+|+ |++|++++|+|+++ |++|+++++++++++.++ ++|+++++|+
T Consensus       161 a~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~  238 (359)
T 1h2b_A          161 VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDA  238 (359)
T ss_dssp             HHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred             hhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEEEec
Confidence            6   7888999999999665 89999999999998 99999999999999 999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHhCCC-CccEEEECCChh---hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          205 KEEPDLDAALKRCFPQ-GIDIYFENVGGK---MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      ++  .+.+.+++++++ ++|+|||++|+.   .+..++++  ++|+++.+|....     .  ..+...++.+++++.++
T Consensus       239 ~~--~~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~-----~--~~~~~~~~~~~~~i~g~  307 (359)
T 1h2b_A          239 RR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGE-----L--RFPTIRVISSEVSFEGS  307 (359)
T ss_dssp             TS--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSC-----C--CCCHHHHHHTTCEEEEC
T ss_pred             cc--hHHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCC-----C--CCCHHHHHhCCcEEEEe
Confidence            86  377888888887 999999999986   78888888  9999999987432     1  34556778899999887


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ....     .+.++++++++++|++++.+ .+|+|+++++|++.+.+++..||+|+++
T Consensus       308 ~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          308 LVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             CSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             cCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            7655     67899999999999999888 8899999999999999988889999974

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=4.5e-49  Score=354.36  Aligned_cols=299  Identities=19%  Similarity=0.192  Sum_probs=258.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC-CCCCCCCCCCeeEEe---
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP-SFVDSFHPGELKFWI---   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~-~~~~p~~~G~e~~G~---   85 (339)
                      |||++++++  ++|    +++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.. ...+|.++|||++|+   
T Consensus         1 MkA~~~~~~--g~~----l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~   70 (345)
T 3jv7_A            1 MKAVQYTEI--GSE----PVVVD--IPTP-TPGP-GEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAE   70 (345)
T ss_dssp             CEEEEECST--TSC----CEEEE--CCCC-CCCT-TCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEE
T ss_pred             CeEEEEcCC--CCc----eEEEE--ecCC-CCCC-CeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEE
Confidence            799999987  665    45654  5666 3488 99999999999999999999986542 246789999999999   


Q ss_pred             --eCCCCCCCCCEEEe-----------------------------------ccceeeEEEec-CccceeeccCCCCCccc
Q 037444           86 --LHIQNYAKDDLVWG-----------------------------------STGWEEYSLVT-APQLLIKIQHTDVPLSY  127 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~-----------------------------------~g~~~~~~~v~-~~~~~~~i~p~~~~~~~  127 (339)
                        +++++|++||||++                                   .|+|+||++++ ++. ++++ |+ ++.. 
T Consensus        71 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~-~~~~-p~-~~~~-  146 (345)
T 3jv7_A           71 LGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARH-LVPI-GD-LDPV-  146 (345)
T ss_dssp             ECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGG-EEEC-TT-CCHH-
T ss_pred             ECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhc-eEeC-CC-CCHH-
Confidence              78899999999986                                   37899999999 777 9999 98 7665 


Q ss_pred             cccccCchhhhHHHHHHH-hcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          128 YTGILGMPGVTAYAGLYE-VCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~-~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                      ++|+++++++|||+++.+ ..++++|++|||+|+ |++|++++|+|+.+ |++|+++++++++++.++ ++|++++++++
T Consensus       147 ~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~~i~~~  224 (345)
T 3jv7_A          147 AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSG  224 (345)
T ss_dssp             HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSEEEECS
T ss_pred             HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcCC
Confidence            688899999999999976 458999999999997 99999999999999 679999999999999999 99999999987


Q ss_pred             ChhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          206 EEPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       206 ~~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      +  ++.+.+++.+++ ++|+||||+|+. .+..++++|+++|+++.+|.....     ....+. .++.+++++.++...
T Consensus       225 ~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~-~~~~~~~~i~g~~~~  296 (345)
T 3jv7_A          225 A--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGA-----HAKVGF-FMIPFGASVVTPYWG  296 (345)
T ss_dssp             T--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTC-----CEEEST-TTSCTTCEEECCCSC
T ss_pred             C--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----CCCcCH-HHHhCCCEEEEEecC
Confidence            5  788999999988 999999999986 899999999999999999875442     112233 567788888888776


Q ss_pred             cccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .     .+.++++++++++|++++ +..+|+++++++|++.+.+++..||+|+++
T Consensus       297 ~-----~~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          297 T-----RSELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             C-----HHHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             C-----HHHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            6     678999999999999998 447799999999999999999999999864

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1e-48  Score=355.93  Aligned_cols=306  Identities=17%  Similarity=0.187  Sum_probs=257.6

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      ..|++|||+++.+.  +.+    +++++  .|.| .+++ +||+|||+++|||++|++.+.|.  +...+|.++|||++|
T Consensus         4 ~~p~~mka~~~~~~--g~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~--~~~~~P~v~GhE~~G   71 (376)
T 1e3i_A            4 GKVIKCKAAIAWKT--GSP----LCIEE--IEVS-PPKA-CEVRIQVIATCVCPTDINATDPK--KKALFPVVLGHECAG   71 (376)
T ss_dssp             TSCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHTTCTT--SCCCSSBCCCCEEEE
T ss_pred             CCChheeEEEEecC--CCC----eEEEE--eeCC-CCCC-CeEEEEEeEEeEchhhHHHhcCC--CCCCCCcccCccccE
Confidence            45789999999886  544    46654  5555 3477 99999999999999999988885  223578999999999


Q ss_pred             e-----eCCCCCCCCCEEEec-------------------------------------------------------ccee
Q 037444           85 I-----LHIQNYAKDDLVWGS-------------------------------------------------------TGWE  104 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~-------------------------------------------------------g~~~  104 (339)
                      +     ++|++|++||||++.                                                       |+|+
T Consensus        72 ~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~a  151 (376)
T 1e3i_A           72 IVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFS  151 (376)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSB
T ss_pred             EEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccce
Confidence            9     788999999999852                                                       7899


Q ss_pred             eEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe
Q 037444          105 EYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSA  183 (339)
Q Consensus       105 ~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~  183 (339)
                      ||++++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++
T Consensus       152 ey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~  227 (376)
T 1e3i_A          152 QYTVVSEAN-LARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAID  227 (376)
T ss_dssp             SEEEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEC
T ss_pred             eEEEecccc-EEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEc
Confidence            999999998 9999 9996555 688888999999999988899999999999996 9999999999999999 899999


Q ss_pred             CCHHHHHHHHHHhCCCeeeeCCC--hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCC
Q 037444          184 GSKEKVDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLE  259 (339)
Q Consensus       184 ~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~  259 (339)
                      +++++++.++ ++|+++++++++  . ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.+|....    
T Consensus       228 ~~~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~----  301 (376)
T 1e3i_A          228 INGEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD----  301 (376)
T ss_dssp             SCGGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS----
T ss_pred             CCHHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC----
Confidence            9999999998 999999998874  4 78888998887799999999997 6889999999999 99999987321    


Q ss_pred             CCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEE
Q 037444          260 KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVA  337 (339)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  337 (339)
                        ....+...++.++ ++.++....+.  ..+.++++++++++|++++  .+..+|+|+++++|++.+.+++ .+|++++
T Consensus       302 --~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~  375 (376)
T 1e3i_A          302 --EMTIPTVDVILGR-SINGTFFGGWK--SVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILT  375 (376)
T ss_dssp             --EEEEEHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEE
T ss_pred             --ccccCHHHhhccC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEe
Confidence              1234556667777 88877653321  2567899999999999874  5677899999999999998876 4699987


Q ss_pred             e
Q 037444          338 V  338 (339)
Q Consensus       338 ~  338 (339)
                      +
T Consensus       376 ~  376 (376)
T 1e3i_A          376 F  376 (376)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.4e-49  Score=356.45  Aligned_cols=297  Identities=17%  Similarity=0.145  Sum_probs=252.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |+|+|||+++.+.  +++    +++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.. ..+|.++|||++|+
T Consensus         1 M~m~mka~~~~~~--~~~----l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~   69 (348)
T 3two_A            1 MRVQSKGFAIFSK--DEH----FKPHD--FSRH-AVGP-RDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGI   69 (348)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEE
T ss_pred             CceEEEEEEEccC--CCC----CeEEE--eeCC-CCCC-CeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEE
Confidence            4578999999886  444    56655  5555 3478 99999999999999999999986543 46789999999999


Q ss_pred             -----eCCCCCCCCCEEEec----------------------------------------cceeeEEEecCccceeeccC
Q 037444           86 -----LHIQNYAKDDLVWGS----------------------------------------TGWEEYSLVTAPQLLIKIQH  120 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~~~~~~i~p  120 (339)
                           +++++|++||||++.                                        |+|+||++++++. ++++ |
T Consensus        70 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P  147 (348)
T 3two_A           70 IKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENY-VISV-D  147 (348)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGG-CEEC-C
T ss_pred             EEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhh-EEEC-C
Confidence                 789999999999752                                        8999999999999 9999 9


Q ss_pred             CCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe
Q 037444          121 TDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD  200 (339)
Q Consensus       121 ~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~  200 (339)
                      +++++. ++|++++++.|||++|. ..++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++
T Consensus       148 ~~~~~~-~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~  223 (348)
T 3two_A          148 KNAPLE-KVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKH  223 (348)
T ss_dssp             TTSCHH-HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTCSE
T ss_pred             CCCCHH-HhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCe
Confidence            996665 68889999999999995 469999999999997 99999999999999999999999999999999 999999


Q ss_pred             eeeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHH-hcccccc
Q 037444          201 AFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLI-GKRIRLE  278 (339)
Q Consensus       201 v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~  278 (339)
                      ++ .+.. .    +    ..++|+|||++|+. .+..++++|+++|+++.+|.....    .....+...++ .+++++.
T Consensus       224 v~-~~~~-~----~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~~i~  289 (348)
T 3two_A          224 FY-TDPK-Q----C----KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVE----VAPVLSVFDFIHLGNRKVY  289 (348)
T ss_dssp             EE-SSGG-G----C----CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGG----GCCEEEHHHHHHTCSCEEE
T ss_pred             ec-CCHH-H----H----hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCC----CcccCCHHHHHhhCCeEEE
Confidence            88 3321 2    1    11799999999987 999999999999999999875411    11124556666 8999999


Q ss_pred             ceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          279 GFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       279 ~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      |+....     .+.++++++++++|++++.+ .+|+++++++|++.+.+++..||+|++++
T Consensus       290 g~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          290 GSLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             ECCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             EEecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence            988766     67799999999999999865 57999999999999999999999999873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=8.3e-49  Score=355.51  Aligned_cols=318  Identities=13%  Similarity=0.143  Sum_probs=253.5

Q ss_pred             Ccccc--cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCC
Q 037444            1 MAAEQ--EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHP   78 (339)
Q Consensus         1 m~~~~--~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~   78 (339)
                      |...+  ||.+|||+++++.       ..++++ .+.|.| .+++ +||+|||.++|||++|++.+.+.    ..+|.++
T Consensus         1 ~~~~tm~~p~~mkA~v~~~~-------~~l~~~-~~~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~----~~~p~v~   66 (371)
T 3gqv_A            1 MGDQPFIPPPQQTALTVNDH-------DEVTVW-NAAPCP-MLPR-DQVYVRVEAVAINPSDTSMRGQF----ATPWAFL   66 (371)
T ss_dssp             ---CCCCCCSCEEEEEECTT-------SCEEEE-EEECCC-CCCT-TSEEEEEEEEECCGGGGC---------CCTTSCC
T ss_pred             CCCCCCCCchhceeEEEcCC-------CceEEe-ccCCCC-CCCC-CEEEEEEEEEEcCHHHHHHhhcC----CCCCccC
Confidence            44555  4568999999774       335665 145556 3478 99999999999999999988762    3468999


Q ss_pred             CCeeEEe-----eCCCCCCCCCEEEec-----------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHH
Q 037444           79 GELKFWI-----LHIQNYAKDDLVWGS-----------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAG  142 (339)
Q Consensus        79 G~e~~G~-----~~v~~~~~Gd~V~~~-----------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~  142 (339)
                      |||++|+     +++++|++||||++.           |+|+||++++++. ++++ |++++.. ++|++++++.|||++
T Consensus        67 G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~ta~~~  143 (371)
T 3gqv_A           67 GTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRV-WAKI-PKGLSFE-QAAALPAGISTAGLA  143 (371)
T ss_dssp             CSEEEEEEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTC-EEEC-CTTCCHH-HHHTSHHHHHHHHHH
T ss_pred             ccccEEEEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhh-eEEC-CCCCCHH-HHhhhhhhHHHHHHH
Confidence            9999999     788999999999975           7999999999999 9999 9996655 677889999999999


Q ss_pred             HHHh-cCC-----------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          143 LYEV-CSP-----------KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       143 l~~~-~~~-----------~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      |.+. .++           ++|++|||+|++|++|++++|+|+.+|++|++++ ++++++.++ ++|+++++|+++. ++
T Consensus       144 l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~  220 (371)
T 3gqv_A          144 MKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NL  220 (371)
T ss_dssp             HHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-TH
T ss_pred             HHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hH
Confidence            9777 553           8999999999999999999999999999999998 788899998 9999999999987 99


Q ss_pred             HHHHHHhCCCCccEEEECCCh-hhHHHHHHhh-ccCCEEEEEecccccCCCCCcc---ccchHHHHhccccccceecccc
Q 037444          211 DAALKRCFPQGIDIYFENVGG-KMLDAVLLNM-RLRGRIAVCGMISQYNLEKPEG---VHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                      .+.+++++++++|+||||+|+ ..+..++++| +++|+++.+|............   ......++.+++++.|+.....
T Consensus       221 ~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~  300 (371)
T 3gqv_A          221 AQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPG  300 (371)
T ss_dssp             HHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCC
T ss_pred             HHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccc
Confidence            999999998899999999998 5789999999 5899999998644321000001   1123456778999888755433


Q ss_pred             -c---chhHHHHHHHHHHHHcCCceeeeeee--eCcccHHHHHHHhHcCCccc-eEEEEe
Q 037444          286 -Y---HLYPKFLELVIPAIREGKMVYVEDIA--EGLENAPAALVGLFTGRNVG-KQLVAV  338 (339)
Q Consensus       286 -~---~~~~~~l~~~~~~l~~g~~~~~~~~~--~~l~~~~~a~~~~~~~~~~g-kvvv~~  338 (339)
                       +   +...+.++++++++++|++++.+..+  |+|+++++|++.+.+++..| |+|+++
T Consensus       301 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~  360 (371)
T 3gqv_A          301 SEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRL  360 (371)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEe
Confidence             1   22345567899999999999876654  79999999999999998887 566654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2e-48  Score=353.76  Aligned_cols=309  Identities=17%  Similarity=0.184  Sum_probs=258.9

Q ss_pred             cccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeE
Q 037444            4 EQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKF   83 (339)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~   83 (339)
                      ...|++|||+++++.  +.+    +++++  .|.| .+++ +||+|||.++|||++|++.+.|.+..  .+|.++|||++
T Consensus         3 ~~~~~~mkA~~~~~~--g~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~--~~P~v~GhE~~   70 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEE--KKP----FSIEE--VEVA-PPKA-HEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAA   70 (374)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEE
T ss_pred             CCCceeEEEEEEecC--CCc----eEEEE--ccCC-CCCC-CeEEEEEeEEeechhhHHHHcCCCCC--CCCcccCcCce
Confidence            446789999999886  544    46654  5555 3477 99999999999999999999886532  37899999999


Q ss_pred             Ee-----eCCCCCCCCCEEEec---------------------------------------------------cceeeEE
Q 037444           84 WI-----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYS  107 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~  107 (339)
                      |+     ++|++|++||||++.                                                   |+|+||+
T Consensus        71 G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~  150 (374)
T 2jhf_A           71 GIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYT  150 (374)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEE
T ss_pred             EEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEE
Confidence            99     788999999999853                                                   7899999


Q ss_pred             EecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 037444          108 LVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK  186 (339)
Q Consensus       108 ~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~  186 (339)
                      +++++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++
T Consensus       151 ~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~  226 (374)
T 2jhf_A          151 VVDEIS-VAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK  226 (374)
T ss_dssp             EEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             EEchHH-eEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence            999998 9999 9996655 688889999999999988899999999999995 9999999999999999 899999999


Q ss_pred             HHHHHHHHHhCCCeeeeCCC--hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCc
Q 037444          187 EKVDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPE  262 (339)
Q Consensus       187 ~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~  262 (339)
                      ++++.++ ++|+++++++++  . ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.+|.....    ..
T Consensus       227 ~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~  300 (374)
T 2jhf_A          227 DKFAKAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS----QN  300 (374)
T ss_dssp             GGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTT----CC
T ss_pred             HHHHHHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCC----Cc
Confidence            9999998 999999998874  4 78888998887799999999997 6889999999999 999999875421    11


Q ss_pred             cccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          263 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...+...++.++ ++.++....+.  ..+.++++++++++|++++  .+..+|+|+++++|++.+.+++. +|+++++
T Consensus       301 ~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          301 LSMNPMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             EEECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             cccCHHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            233455666777 88877654321  2567899999999999874  56778999999999999988774 6999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-48  Score=354.47  Aligned_cols=309  Identities=17%  Similarity=0.180  Sum_probs=259.3

Q ss_pred             ccccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhh-hhcCCCCCCCCCCCCCCCe
Q 037444            3 AEQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW-RMSKLDRPSFVDSFHPGEL   81 (339)
Q Consensus         3 ~~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~-~~~~~~~~~~~~p~~~G~e   81 (339)
                      +...|++|||+++.+.  ++|    +++++  .|.| .+++ +||+|||.++|||++|++ .+.|.+.  ..+|.++|||
T Consensus         2 ~~~~~~~mka~~~~~~--~~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE   69 (374)
T 1cdo_A            2 TVGKVIKCKAAVAWEA--NKP----LVIEE--IEVD-VPHA-NEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHE   69 (374)
T ss_dssp             CTTSCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCC
T ss_pred             CCCCcceeEEEEEecC--CCC----eEEEE--eeCC-CCCC-CEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCcc
Confidence            3456789999999886  544    46654  5555 3478 999999999999999999 8888543  4568999999


Q ss_pred             eEEe-----eCCCCCCCCCEEEec---------------------------------------------------cceee
Q 037444           82 KFWI-----LHIQNYAKDDLVWGS---------------------------------------------------TGWEE  105 (339)
Q Consensus        82 ~~G~-----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~  105 (339)
                      ++|+     ++|++|++||||++.                                                   |+|+|
T Consensus        70 ~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ae  149 (374)
T 1cdo_A           70 GAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQ  149 (374)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBS
T ss_pred             ceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCcccee
Confidence            9999     788999999999853                                                   78999


Q ss_pred             EEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 037444          106 YSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAG  184 (339)
Q Consensus       106 ~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~  184 (339)
                      |++++++. ++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus       150 y~~v~~~~-~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~  225 (374)
T 1cdo_A          150 YTVVNQIA-VAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDL  225 (374)
T ss_dssp             EEEEEGGG-EEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             EEEEchhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            99999998 9999 9996655 688889999999999988899999999999995 9999999999999999 8999999


Q ss_pred             CHHHHHHHHHHhCCCeeeeCCC--hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCC
Q 037444          185 SKEKVDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEK  260 (339)
Q Consensus       185 ~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~  260 (339)
                      ++++++.++ ++|+++++++++  . ++.+.+++.+++++|+|||++|+ ..+..++++|+++ |+++.+|.....    
T Consensus       226 ~~~~~~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----  299 (374)
T 1cdo_A          226 NPDKFEKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH----  299 (374)
T ss_dssp             CGGGHHHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS----
T ss_pred             CHHHHHHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCC----
Confidence            999999999 999999998874  4 78888988887799999999997 6889999999999 999999875421    


Q ss_pred             CccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          261 PEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                       ....+...++.++ ++.++....+.  ..+.++++++++++|++++  .+..+|+|+++++|++.+.+++. +|+++++
T Consensus       300 -~~~~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          300 -DVATRPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             -CEEECHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             -CcccCHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence             1234455666777 88877654321  2567899999999999884  56778999999999999988775 6999875

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.9e-48  Score=350.65  Aligned_cols=306  Identities=18%  Similarity=0.127  Sum_probs=253.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.  |     .+++  .|.|.|+.++| +||||||+++|||++|++.+.+...  ..+|+++|||++|+    
T Consensus         1 MkAvv~~~~--g-----~l~v--~e~p~P~~~~~-~eVlVkv~a~gi~~sD~~~~~g~~~--~~~P~i~G~E~~G~V~~v   68 (346)
T 4a2c_A            1 MKSVVNDTD--G-----IVRV--AESVIPEIKHQ-DEVRVKIASSGLCGSDLPRIFKNGA--HYYPITLGHEFSGYIDAV   68 (346)
T ss_dssp             CEEEEECSS--S-----CEEE--EECCCCCCCST-TEEEEEEEEEECCTTHHHHHHSSCS--SSSSBCCCCEEEEEEEEE
T ss_pred             CCEEEEecC--C-----CEEE--EEEeCCCCCCc-CEEEEEEEEEEECHHHHHHHcCCCC--CCCCccccEEEEEEEEEE
Confidence            799999875  3     2455  45777754578 9999999999999999998888543  46789999999999    


Q ss_pred             -eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccCc
Q 037444           86 -LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGM  134 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~  134 (339)
                       ++|+++++||+|++.                              |+|+||++++++. ++++ |++++.  +.|++..
T Consensus        69 G~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~--~~aa~l~  144 (346)
T 4a2c_A           69 GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKN-VFAL-PTDMPI--EDGAFIE  144 (346)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGG-EEEC-CTTSCG--GGGGGHH
T ss_pred             CCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchhe-EEEC-CCCCCH--HHHHhch
Confidence             889999999999763                              6899999999999 9999 999554  4444444


Q ss_pred             hhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          135 PGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       135 ~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      +..++++++ ...++++|++|||+|+ |++|++++|+|+++|++ +++++++++++++++ ++|+++++|+++. +..+.
T Consensus       145 ~~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~-~~~~~  220 (346)
T 4a2c_A          145 PITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-SAPQM  220 (346)
T ss_dssp             HHHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHH
T ss_pred             HHHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCC-CHHHH
Confidence            555555555 7789999999999997 99999999999999995 577888999999999 9999999999997 88888


Q ss_pred             HHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHH
Q 037444          214 LKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPK  291 (339)
Q Consensus       214 v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
                      ++.++++ ++|+|||++|+ ..++.++++++++|+++.+|......   .........++.+++++.|++.........+
T Consensus       221 ~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~  297 (346)
T 4a2c_A          221 QSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL---HLTSATFGKILRKELTVIGSWMNYSSPWPGQ  297 (346)
T ss_dssp             HHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCE---EECHHHHHHHHHHTCEEEECCTTCCSSTTCH
T ss_pred             HHhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCc---cccccCHHHHhhceeEEEEEeccccCcchHH
Confidence            9988887 99999999996 58899999999999999998754321   1122345667889999998876543333356


Q ss_pred             HHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          292 FLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       292 ~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .++++++++++|++++  .++.+|+|+++++|++.+.+++..||+|+.+
T Consensus       298 ~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          298 EWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            7899999999999864  4778899999999999999999999999863

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.6e-48  Score=348.32  Aligned_cols=300  Identities=20%  Similarity=0.221  Sum_probs=257.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  +.+    ++++  +.|.|. +++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|+    
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~v   70 (339)
T 1rjw_A            1 MKAAVVEQF--KEP----LKIK--EVEKPT-ISY-GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEV   70 (339)
T ss_dssp             CEEEEBSST--TSC----CEEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEE
T ss_pred             CeEEEEcCC--CCC----cEEE--EeeCCC-CCC-CEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEE
Confidence            689999876  533    4564  466663 478 99999999999999999999886543335689999999999    


Q ss_pred             -eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       +++++|++||||++                               .|+|+||++++++. ++++ |++++.. ++|+++
T Consensus        71 G~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~l~  147 (339)
T 1rjw_A           71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNLSFE-EAAPIF  147 (339)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTSCHH-HHGGGG
T ss_pred             CCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHH-EEEC-CCCCCHH-Hhhhhh
Confidence             78899999999975                               27899999999999 9999 9996555 688899


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      .++.|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++.+.
T Consensus       148 ~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~~-~~~~~  223 (339)
T 1rjw_A          148 CAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAAKF  223 (339)
T ss_dssp             THHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-CHHHH
T ss_pred             hhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecCCCc-cHHHH
Confidence            999999999965 58999999999998 88999999999999999999999999999998 8999999998876 88888


Q ss_pred             HHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHH
Q 037444          214 LKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF  292 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
                      +++.+ +++|++||++|. ..+..++++|+++|+++.+|.....      ...+...++.+++++.++....     .+.
T Consensus       224 ~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~  291 (339)
T 1rjw_A          224 MKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT-----RKD  291 (339)
T ss_dssp             HHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHH
T ss_pred             HHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEeccCC-----HHH
Confidence            88877 689999999997 6889999999999999999875421      2345567788999998876655     677


Q ss_pred             HHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          293 LELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       293 l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++++++++++|++++.+ .+|+|+++++|++.+.+++..||+|++++
T Consensus       292 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  337 (339)
T 1rjw_A          292 LQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLE  337 (339)
T ss_dssp             HHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            89999999999999864 57999999999999999888899999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.5e-48  Score=353.15  Aligned_cols=308  Identities=21%  Similarity=0.238  Sum_probs=258.2

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      .|++|||+++.+.  +++    +++++  .|.| .+++ +||+|||+++|||++|++.+.|.+. ...+|.++|||++|+
T Consensus         3 ~p~~mkA~~~~~~--~~~----l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~P~v~GhE~~G~   71 (373)
T 2fzw_A            3 EVIKCKAAVAWEA--GKP----LSIEE--IEVA-PPKA-HEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGI   71 (373)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEEE
T ss_pred             CccceEEEEEecC--CCC----cEEEE--eeCC-CCCC-CEEEEEEEEEEEchhhHHHhcCCCC-CCCCCccccccccEE
Confidence            4689999999886  544    46654  5555 3477 9999999999999999999988653 235689999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEe
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  109 (339)
                           ++|++|++||||++.                                                   |+|+||+++
T Consensus        72 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v  151 (373)
T 2fzw_A           72 VESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV  151 (373)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred             EEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEE
Confidence                 788999999999853                                                   689999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK  188 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~  188 (339)
                      +++. ++++ |++++.. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus       152 ~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~  227 (373)
T 2fzw_A          152 ADIS-VAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK  227 (373)
T ss_dssp             EGGG-EEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG
T ss_pred             chhh-eEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence            9998 9999 9996655 688899999999999988899999999999996 9999999999999999 89999999999


Q ss_pred             HHHHHHHhCCCeeeeCCC--hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCccc
Q 037444          189 VDLLKNKFGFDDAFNYKE--EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGV  264 (339)
Q Consensus       189 ~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~  264 (339)
                      ++.++ ++|+++++++++  . ++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.+|.....    ....
T Consensus       228 ~~~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~  301 (373)
T 2fzw_A          228 FARAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----EEIA  301 (373)
T ss_dssp             HHHHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEE
T ss_pred             HHHHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCC----ceee
Confidence            99999 999999998874  4 78889999887799999999997 6889999999999 999999875421    1123


Q ss_pred             cchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          265 HNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .....++.++ ++.++....+.  ..+.++++++++++|++++  .+..+|+|+++++|++.+.+++. +|+++++
T Consensus       302 ~~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          302 TRPFQLVTGR-TWKGTAFGGWK--SVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             ECTHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             eCHHHHhcCC-EEEEeccCCCC--cHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            3445666677 88877654321  2567899999999999884  56778999999999999988875 6999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.3e-48  Score=348.78  Aligned_cols=310  Identities=19%  Similarity=0.161  Sum_probs=262.8

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++++++  |.|  +.+++++  .|.|. +++ +||+|||.++|||++|++.+.|.+. ...+|.++|||++|+    
T Consensus         2 Mka~~~~~~--g~~--~~l~~~~--~~~p~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~p~v~G~E~~G~V~~v   72 (327)
T 1qor_A            2 ATRIEFHKH--GGP--EVLQAVE--FTPAD-PAE-NEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVSKV   72 (327)
T ss_dssp             CEEEEBSSC--CSG--GGCEEEE--CCCCC-CCT-TEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEEEE
T ss_pred             cEEEEEcCC--CCh--hheEEec--cCCCC-CCC-CEEEEEEEEEecCHHHHHHhCCCCC-CCCCCCCCCceeEEEEEEE
Confidence            799999887  766  4566654  55563 478 9999999999999999999988653 234689999999999    


Q ss_pred             -eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444           86 -LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                       +++++|++||||...    |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||
T Consensus        73 G~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  149 (327)
T 1qor_A           73 GSGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA  149 (327)
T ss_dssp             CTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEECCCCCceeeeEEEecHHH-cEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC
Confidence             788999999999654    8999999999998 9999 9995554 577899999999999977889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHH
Q 037444          161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLL  239 (339)
Q Consensus       161 ~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~  239 (339)
                      +|++|++++|+++..|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+.+ ++|++|||+|...+..+++
T Consensus       150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~  227 (327)
T 1qor_A          150 AGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLD  227 (327)
T ss_dssp             TBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence            999999999999999999999999999999998 8999999998886 888899888876 8999999999889999999


Q ss_pred             hhccCCEEEEEecccccCCCCCccccchHHHHhc-cccccceecccc---cchhHHHHHHHHHHHHcCCceeeee--eee
Q 037444          240 NMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGK-RIRLEGFLAGDY---YHLYPKFLELVIPAIREGKMVYVED--IAE  313 (339)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~~~~~l~~g~~~~~~~--~~~  313 (339)
                      +++++|+++.+|.....     ....+...++.+ ++++.+.....+   +....+.++++++++++|++++.+.  .+|
T Consensus       228 ~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~  302 (327)
T 1qor_A          228 CLQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKY  302 (327)
T ss_dssp             TEEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEE
T ss_pred             HhcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEE
Confidence            99999999999875432     122345556666 666665443222   2223567899999999999999888  889


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEe
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++++++|++.+.+++..||+++++
T Consensus       303 ~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          303 PLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             EGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999999988889999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-48  Score=349.57  Aligned_cols=307  Identities=18%  Similarity=0.200  Sum_probs=261.7

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      ||.+|||+++++.  +.+    +++++  .|.|. +++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+
T Consensus         2 ~p~~mka~~~~~~--g~~----l~~~~--~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~   71 (347)
T 2hcy_A            2 IPETQKGVIFYES--HGK----LEYKD--IPVPK-PKA-NELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGV   71 (347)
T ss_dssp             CCSEEEEEEESST--TCC----CEEEE--EECCC-CCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEE
T ss_pred             CCcccEEEEEeCC--CCC----CEEEE--eeCCC-CCC-CEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEE
Confidence            6778999999886  533    46654  55563 478 99999999999999999999886542335689999999999


Q ss_pred             -----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 -----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                           +++++|++||||++                               .|+|+||++++++. ++++ |++++.. ++
T Consensus        72 V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~a  148 (347)
T 2hcy_A           72 VVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQ-AAHI-PQGTDLA-QV  148 (347)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTT-SEEE-CTTCCHH-HH
T ss_pred             EEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEecccc-EEEC-CCCCCHH-HH
Confidence                 78899999999975                               27899999999999 9999 9996555 68


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCC-Chh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYK-EEP  208 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~-~~~  208 (339)
                      |+++.++.|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+. .. 
T Consensus       149 a~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-  225 (347)
T 2hcy_A          149 APILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKEK-  225 (347)
T ss_dssp             GGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEETTTCS-
T ss_pred             HHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEecCccH-
Confidence            8899999999999954 58999999999999999999999999999999999999999989888 89999899877 44 


Q ss_pred             hHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc
Q 037444          209 DLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH  287 (339)
Q Consensus       209 ~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
                      ++.+.+++.+.+++|++||++|. ..+..++++|+++|+++.+|...+.     ....+...++.+++++.|+....   
T Consensus       226 ~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~---  297 (347)
T 2hcy_A          226 DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISIVGSYVGN---  297 (347)
T ss_dssp             CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEEEECCCCC---
T ss_pred             hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEEEEccCCC---
Confidence            88888888776689999999997 6889999999999999999875421     12345667788999998876655   


Q ss_pred             hhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          288 LYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       288 ~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                        .+.++++++++++|++++.+ .+|+|+++++|++.+.+++..||+|++++
T Consensus       298 --~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          298 --RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             --HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             --HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence              67789999999999999864 57999999999999999888899999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=5.1e-48  Score=347.65  Aligned_cols=331  Identities=67%  Similarity=1.136  Sum_probs=266.9

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCC---CCCCCCCCCee
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPS---FVDSFHPGELK   82 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~---~~~p~~~G~e~   82 (339)
                      ||++||++++..+..++|....++++..+.|.|.++++ +||||||.++|+|+.|. ...|.+...   ..+|+++|||+
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~-~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~   78 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGT-NSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPI   78 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSS-SCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBC
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCC-CEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCee
Confidence            56789999998875566631157887445665643588 99999999999999885 344433211   24688999999


Q ss_pred             EEe-------eCCCCCCCCCEEEeccceeeEEEecCcc-ceeeccCC-CCCccccccccCchhhhHHHHHHHhcCCCCCC
Q 037444           83 FWI-------LHIQNYAKDDLVWGSTGWEEYSLVTAPQ-LLIKIQHT-DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGE  153 (339)
Q Consensus        83 ~G~-------~~v~~~~~Gd~V~~~g~~~~~~~v~~~~-~~~~i~p~-~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~  153 (339)
                      +|+       +++++|++||||++.|+|+||++++++. .++++ |+ ++++++++|+++++++|||+++.+.+++++|+
T Consensus        79 ~G~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  157 (345)
T 2j3h_A           79 QGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGE  157 (345)
T ss_dssp             EEEEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTC
T ss_pred             ecceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCC
Confidence            886       6788999999999999999999998643 28888 75 55566667899999999999998888999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      +|||+|++|++|++++|+|+..|++|+++++++++++.+++++|+++++|+.+..++.+.+++.+++++|++||++|+..
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~  237 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKM  237 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHH
Confidence            99999999999999999999999999999999999998874699999998875226778888877568999999999989


Q ss_pred             HHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          234 LDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       234 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      +..++++++++|+++.+|.....+........+...++.+++++.|+....+.....+.++++++++++|++++.+..+|
T Consensus       238 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~  317 (345)
T 2j3h_A          238 LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD  317 (345)
T ss_dssp             HHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             HHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccC
Confidence            99999999999999999876542111111223445677889998887665544445677999999999999998777789


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEeC
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +|+++++|++.+.+++..||+|++++
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~~  343 (345)
T 2j3h_A          318 GLEKAPEALVGLFHGKNVGKQVVVVA  343 (345)
T ss_dssp             SGGGSHHHHHHHHTTCCSSEEEEESS
T ss_pred             CHHHHHHHHHHHHcCCCceEEEEEeC
Confidence            99999999999999988999999863

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=1.2e-48  Score=354.14  Aligned_cols=302  Identities=18%  Similarity=0.201  Sum_probs=257.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      +|++|||+++++.  +     .++++  +.|.| .+++ +||+|||.++|||++|++.+.|.+.  ..+|.++|||++|+
T Consensus        20 ~p~~mkA~v~~~~--~-----~l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~--~~~p~v~G~e~~G~   86 (370)
T 4ej6_A           20 FQSMMKAVRLESV--G-----NISVR--NVGIP-EPGP-DDLLVKVEACGICGTDRHLLHGEFP--STPPVTLGHEFCGI   86 (370)
T ss_dssp             -CCEEEEEEEEET--T-----EEEEE--EEECC-CCCT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSEECCCSEEEE
T ss_pred             cchheEEEEEecC--C-----ceEEE--EccCC-CCCC-CeEEEEEEEEeecHHHHHHHcCCCC--CCCCeecCcceEEE
Confidence            5788999999885  2     34554  45666 3478 9999999999999999999998653  46789999999999


Q ss_pred             -----eCCCCCCCCCEEEe------------------------------ccceeeEEEecCccceeeccCCCCCcccccc
Q 037444           86 -----LHIQNYAKDDLVWG------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTG  130 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa  130 (339)
                           +++++|++||||++                              .|+|+||++++++. ++++ |++++  ++.|
T Consensus        87 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~~~--~~~a  162 (370)
T 4ej6_A           87 VVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQ-AFEI-PLTLD--PVHG  162 (370)
T ss_dssp             EEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTSC--TTGG
T ss_pred             EEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhh-EEEC-CCCCC--HHHH
Confidence                 78899999999986                              37999999999998 9999 99954  4445


Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD  209 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  209 (339)
                      +++.++.+||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.++++ ++|+++++++++. +
T Consensus       163 al~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~  238 (370)
T 4ej6_A          163 AFCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG-D  238 (370)
T ss_dssp             GGHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTSS-C
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCCCc-C
Confidence            5888999999999 7799999999999997 9999999999999999 8999999999999999 9999999999887 9


Q ss_pred             HHHHHHH---hCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          210 LDAALKR---CFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       210 ~~~~v~~---~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                      +.+.+++   .+++++|+||||+|+ ..+..++++|+++|+++.+|.....    .....+...++.+++++.|+.... 
T Consensus       239 ~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~-  313 (370)
T 4ej6_A          239 VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFINP-  313 (370)
T ss_dssp             HHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCSCT-
T ss_pred             HHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEeccCh-
Confidence            9999998   777799999999995 6899999999999999999875432    123456778889999999986543 


Q ss_pred             cchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHHHhHcCC-ccceEEEEe
Q 037444          286 YHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALVGLFTGR-NVGKQLVAV  338 (339)
Q Consensus       286 ~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~  338 (339)
                           ..++++++++++|++++  .++.+|+|+++++|++.+.+++ ..+|+++++
T Consensus       314 -----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          314 -----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             -----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             -----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence                 23789999999999964  4778899999999999998876 457888765

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.4e-47  Score=341.56  Aligned_cols=318  Identities=42%  Similarity=0.670  Sum_probs=260.4

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ++|||+++.++++|.|.++.+++++  .|.| .+++ +||+|||.++|||+.|+. +..    ...+|.++|||++|+  
T Consensus         6 ~~mka~~~~~~~~g~~~~~~l~~~e--~~~P-~~~~-~eVlVkv~a~gi~~~~~~-~~~----~~~~p~~~g~e~~G~Vv   76 (333)
T 1v3u_A            6 VKAKSWTLKKHFQGKPTQSDFELKT--VELP-PLKN-GEVLLEALFLSVDPYMRI-ASK----RLKEGAVMMGQQVARVV   76 (333)
T ss_dssp             CEEEEEEECC-----CCGGGEEEEE--EECC-CCCT-TCEEEEEEEEECCTHHHH-HTT----TCCTTSBCCCCEEEEEE
T ss_pred             ccccEEEEeecCCCCCCccceEEEe--CCCC-CCCC-CEEEEEEEEeccCHHHcc-ccC----cCCCCcccccceEEEEE
Confidence            6799999988644555446677765  5555 3478 999999999999999873 211    234678899999998  


Q ss_pred             -eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCC----CCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444           86 -LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTD----VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~----~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                       .++++|++||||++.|+|+||++++++. ++++ |++    +++...+|+++++++|||+++.+.+++++|++|||+|+
T Consensus        77 ~~~v~~~~vGdrV~~~g~~aey~~v~~~~-~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  154 (333)
T 1v3u_A           77 ESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAA  154 (333)
T ss_dssp             EESCTTSCTTCEEEECCCSBSEEEESSTT-EEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEEST
T ss_pred             ecCCCCCCCCCEEEecCceEEEEEechHH-eEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecC
Confidence             7888999999999999999999999999 9999 987    55552258999999999999988889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-hhhHHHHHHHhCCCCccEEEECCChhhHHHHHH
Q 037444          161 SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLDAALKRCFPQGIDIYFENVGGKMLDAVLL  239 (339)
Q Consensus       161 ~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~  239 (339)
                      +|++|++++|+++..|++|+++++++++.+.++ ++|++.++|..+ . ++.+.+.+.+.+++|++||++|+..+..+++
T Consensus       155 ~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~  232 (333)
T 1v3u_A          155 AGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEFLNTVLS  232 (333)
T ss_dssp             TBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHHHHHHHH
Confidence            999999999999999999999999999999887 999998999877 5 8888888887678999999999988999999


Q ss_pred             hhccCCEEEEEecccccCCCC-CccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCccc
Q 037444          240 NMRLRGRIAVCGMISQYNLEK-PEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGLEN  317 (339)
Q Consensus       240 ~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~  317 (339)
                      +|+++|+++.+|.....+... .....+...++.+++++.|+....+ +....+.++++++++++|++++.+..+++|++
T Consensus       233 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~  312 (333)
T 1v3u_A          233 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFEN  312 (333)
T ss_dssp             TEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGG
T ss_pred             HHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHH
Confidence            999999999998754321000 0011245667889999988776544 23446788999999999999998878899999


Q ss_pred             HHHHHHHhHcCCccceEEEEe
Q 037444          318 APAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       318 ~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      +++|++.+.+++..||+|+++
T Consensus       313 ~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          313 MPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             HHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999988889999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.6e-48  Score=351.07  Aligned_cols=304  Identities=19%  Similarity=0.180  Sum_probs=253.1

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcC-CCC-CCCCCCCCCCCeeE
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK-LDR-PSFVDSFHPGELKF   83 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~-~~~-~~~~~p~~~G~e~~   83 (339)
                      |+++|||+++++.  +.    .+++++  .|.| .+++ +||+|||.++|||++|++.+.| .+. ....+|.++|||++
T Consensus         1 ~m~~mka~~~~~~--g~----~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~   70 (348)
T 2d8a_A            1 MSEKMVAIMKTKP--GY----GAELVE--VDVP-KPGP-GEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVA   70 (348)
T ss_dssp             --CEEEEEEECSS--SS----SCEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEE
T ss_pred             CCCcceEEEEECC--CC----CEEEEE--CCCC-CCCc-CEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccce
Confidence            4567999999886  42    356654  5556 3478 9999999999999999999888 321 12356899999999


Q ss_pred             Ee-----eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCcccc
Q 037444           84 WI-----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYY  128 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~  128 (339)
                      |+     +++++|++||||++.                              |+|+||++++++. ++++ |++++.. +
T Consensus        71 G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~  147 (348)
T 2d8a_A           71 GEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQN-IWKN-PKSIPPE-Y  147 (348)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGG-EEEC-CTTSCHH-H
T ss_pred             EEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHH-eEEC-CCCCCHH-H
Confidence            99     788999999999874                              7899999999998 9999 9995543 4


Q ss_pred             ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          129 TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      +|.+ .++.|||+++ +.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++++++.
T Consensus       148 aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~  222 (348)
T 2d8a_A          148 ATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEE  222 (348)
T ss_dssp             HTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECTTTS
T ss_pred             HHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCCc
Confidence            5444 5889999999 67889 9999999999 9999999999999999 9999999999999998 9999999999887


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccch-HHHHhccccccceeccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  284 (339)
                       ++.+.+++.+++ ++|+|||++|. ..+..++++++++|+++.+|.....      ...+. ..++.+++++.|+....
T Consensus       223 -~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~~  295 (348)
T 2d8a_A          223 -DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFKALTIYGITGRH  295 (348)
T ss_dssp             -CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTTTCEEEECCCCC
T ss_pred             -CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhCCcEEEEecCCC
Confidence             899999999887 89999999997 6889999999999999999875421      23344 56678889888875432


Q ss_pred             ccchhHHHHHHHHHHHHcCCc--eeeeeeeeC-cccHHHHHHHhHcCCccceEEEEeC
Q 037444          285 YYHLYPKFLELVIPAIREGKM--VYVEDIAEG-LENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~--~~~~~~~~~-l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                          ..+.++++++++++|++  .+.+..+|+ ++++++|++.+.+ ...||+|++++
T Consensus       296 ----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          296 ----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             ----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             ----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence                15678999999999996  455677899 9999999999977 56789999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=2.7e-50  Score=360.25  Aligned_cols=314  Identities=20%  Similarity=0.226  Sum_probs=255.0

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |+.+|||++++++  +.+  ..+++++  .|.| .+++ +||+|||+++|||++|++.+.|.+.....+|.++|||++|+
T Consensus         1 m~~~mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~   72 (330)
T 1tt7_A            1 MSTLFQALQAEKN--ADD--VSVHVKT--ISTE-DLPK-DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGT   72 (330)
T ss_dssp             -CCEEEEEEECCG--GGS--CCCEEEE--EESS-SSCS-SSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEE
T ss_pred             CCCcceEEEEecC--CCC--cceeEee--cCCC-CCCC-CEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEE
Confidence            5678999999887  544  3456654  5556 3477 99999999999999999999886543335689999999999


Q ss_pred             ---eCCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH--hcCCCC
Q 037444           86 ---LHIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKK  151 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~  151 (339)
                         .++++|++||||++.         |+|+||++++++. ++++ |++++.. ++|+++..+.|||.+++.  ..++++
T Consensus        73 V~~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~~~  149 (330)
T 1tt7_A           73 VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQNGLSP  149 (330)
T ss_dssp             EEECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             EEEcCCCCCCCCCEEEEcccccCCCCCccceeEEEecHHH-eEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhcCcCC
Confidence               677889999999853         7999999999998 9999 9996655 688888889999988753  467899


Q ss_pred             CC-EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          152 GE-YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       152 g~-~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      |+ +|||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. + .+.+++++++++|++|||+|
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQGAVDPVG  226 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEEEEEESCC
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCccEEEECCc
Confidence            97 9999999999999999999999999999999999999998 8999999976432 2 22233344448999999999


Q ss_pred             hhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeee
Q 037444          231 GKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVE  309 (339)
Q Consensus       231 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~  309 (339)
                      ++.+..++++++++|+++.+|...+.     ....+...++.+++++.|+..... .....+.++++++++++|++++.+
T Consensus       227 ~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~i  301 (330)
T 1tt7_A          227 GKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLTIV  301 (330)
T ss_dssp             THHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTTSE
T ss_pred             HHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCccccc
Confidence            99999999999999999999875432     122344567889999988753322 222345678888888899998888


Q ss_pred             eeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          310 DIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       310 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ..+|+|+++++|++.+.+++..||+|+++
T Consensus       302 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          302 DREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             EEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             ceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            88999999999999999988889999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.1e-49  Score=351.15  Aligned_cols=311  Identities=19%  Similarity=0.213  Sum_probs=249.0

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .+|||++++++  +.|  ..+++  .+.|.|. +++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|+  
T Consensus         2 ~~mka~~~~~~--g~~--~~l~~--~~~~~p~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~   73 (328)
T 1xa0_A            2 SAFQAFVVNKT--ETE--FTAGV--QTISMDD-LPE-GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (328)
T ss_dssp             CEEEEEEEEEE--TTE--EEEEE--EEEEGGG-SCS-CSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             CcceEEEEecC--CCc--ceeEE--EeccCCC-CCC-CeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEE
Confidence            36899999997  654  23444  4566663 478 99999999999999999998885432235689999999999  


Q ss_pred             -eCCCCCCCCCEEEe---------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH--hcCCCCCC
Q 037444           86 -LHIQNYAKDDLVWG---------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE--VCSPKKGE  153 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~---------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~--~~~~~~g~  153 (339)
                       .++++|++||||++         .|+|+||++++++. ++++ |++++.. ++|++++++.|||.+|+.  ..++++|+
T Consensus        74 ~~~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~g~  150 (328)
T 1xa0_A           74 SSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHGLTPER  150 (328)
T ss_dssp             ECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred             ecCCCCCCCCCEEEEccccCCCCCCccceeEEEechHH-eEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcCCCCCC
Confidence             67888999999985         38999999999998 9999 9996655 688888889999988753  46789997


Q ss_pred             -EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 -YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 -~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                       +|||+|++|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. + .+.+++++++++|++|||+|+.
T Consensus       151 ~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~vid~~g~~  227 (328)
T 1xa0_A          151 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAAVDPVGGR  227 (328)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEEEECSTTT
T ss_pred             ceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEEEECCcHH
Confidence             9999999999999999999999999999999999999998 8999999998764 4 4445555555899999999999


Q ss_pred             hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeee
Q 037444          233 MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDI  311 (339)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~  311 (339)
                      .+..++++++++|+++.+|...+.+     ...+...++.+++++.|+..... .....+.++++.+++++| +++ +..
T Consensus       228 ~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~-~~~  300 (328)
T 1xa0_A          228 TLATVLSRMRYGGAVAVSGLTGGAE-----VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LER-IAQ  300 (328)
T ss_dssp             THHHHHHTEEEEEEEEECSCCSSSC-----CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHH-HEE
T ss_pred             HHHHHHHhhccCCEEEEEeecCCCC-----CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cce-eee
Confidence            9999999999999999998754321     12344567789999988753222 222345677888888888 776 457


Q ss_pred             eeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          312 AEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       312 ~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +|+++++++|++.+.+++..||+|++++
T Consensus       301 ~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          301 EISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             EEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             EeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            8999999999999999888999999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=6.8e-49  Score=365.30  Aligned_cols=314  Identities=19%  Similarity=0.178  Sum_probs=261.8

Q ss_pred             ccccccceEEEeeccC----------CCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCC-------
Q 037444            5 QEAVSNKRVILSNYVT----------GFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL-------   67 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~----------~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~-------   67 (339)
                      ++|.+|||+++.+...          +.|. +.+++++  .|.| .+++ +||+|||.++|||++|++...+.       
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~-~~l~~~e--~p~P-~~~~-~eVlVkV~a~gic~sD~~~~~~~~~~~~~~  100 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPR-KSIHLDD--VPVP-ELGP-GEALVAVMASSVNYNSVHTSIFEPLSTFGF  100 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHH-HHCEEEE--ECCC-CCCT-TEEEEEEEEEEECHHHHHHHTTCSSCSHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCC-CCcEEEE--ccCC-CCCC-CeEEEEEEEEEecchhhhhhhcCcccchhh
Confidence            4678999999997410          1121 3456654  5556 3488 99999999999999998764321       


Q ss_pred             ------CC---CCCCCC-CCCCCeeEEe-----eCCCCCCCCCEEEe------------------------------ccc
Q 037444           68 ------DR---PSFVDS-FHPGELKFWI-----LHIQNYAKDDLVWG------------------------------STG  102 (339)
Q Consensus        68 ------~~---~~~~~p-~~~G~e~~G~-----~~v~~~~~Gd~V~~------------------------------~g~  102 (339)
                            ..   ....+| .++|||++|+     +++++|++||+|++                              .|+
T Consensus       101 ~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~  180 (456)
T 3krt_A          101 LERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGG  180 (456)
T ss_dssp             HHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCS
T ss_pred             hhhccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCc
Confidence                  10   012345 6899999999     78899999999987                              389


Q ss_pred             eeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 037444          103 WEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVV  180 (339)
Q Consensus       103 ~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~  180 (339)
                      |+||++++++. ++++ |++++.. ++|+++.++.|||++|...  +++++|++|||+|++|++|++++|+|+.+|++|+
T Consensus       181 ~aey~~v~~~~-~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi  257 (456)
T 3krt_A          181 LAEIALVKSNQ-LMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPI  257 (456)
T ss_dssp             SBSEEEEEGGG-EEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred             ccceEEechHH-eeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEE
Confidence            99999999999 9999 9996655 6777888999999999654  7899999999999999999999999999999999


Q ss_pred             EEeCCHHHHHHHHHHhCCCeeeeCCChhh-----------------HHHHHHHhCCC-CccEEEECCChhhHHHHHHhhc
Q 037444          181 GSAGSKEKVDLLKNKFGFDDAFNYKEEPD-----------------LDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMR  242 (339)
Q Consensus       181 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-----------------~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~  242 (339)
                      ++++++++++.++ ++|+++++++.+. +                 +.+.+++++++ ++|+||||+|+..+..++++++
T Consensus       258 ~~~~~~~~~~~~~-~lGa~~vi~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~  335 (456)
T 3krt_A          258 CVVSSPQKAEICR-AMGAEAIIDRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTR  335 (456)
T ss_dssp             EEESSHHHHHHHH-HHTCCEEEETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEE
T ss_pred             EEECCHHHHHHHH-hhCCcEEEecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhh
Confidence            9999999999998 9999999998774 4                 34788888887 9999999999999999999999


Q ss_pred             cCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHH
Q 037444          243 LRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAAL  322 (339)
Q Consensus       243 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~  322 (339)
                      ++|+++.+|...+.     ....+...++.+++++.|+....     .+.+.++++++++|++++.++.+|+|+++++|+
T Consensus       336 ~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~  405 (456)
T 3krt_A          336 KGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQAA  405 (456)
T ss_dssp             EEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHH
T ss_pred             CCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHH
Confidence            99999999875432     22345667788888888887766     455678999999999999898999999999999


Q ss_pred             HHhHcCCccceEEEEe
Q 037444          323 VGLFTGRNVGKQLVAV  338 (339)
Q Consensus       323 ~~~~~~~~~gkvvv~~  338 (339)
                      +.+.+++..||+|+.+
T Consensus       406 ~~l~~~~~~GKvvv~~  421 (456)
T 3krt_A          406 YDVHRNLHQGKVGVLC  421 (456)
T ss_dssp             HHHHTTCSSSEEEEES
T ss_pred             HHHHhCCCCCcEEEEe
Confidence            9999999999999875

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.2e-48  Score=363.31  Aligned_cols=313  Identities=20%  Similarity=0.191  Sum_probs=260.3

Q ss_pred             cccccccceEEEeeccCC----------CCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhc--------
Q 037444            4 EQEAVSNKRVILSNYVTG----------FPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMS--------   65 (339)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~----------~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~--------   65 (339)
                      .++|.+|||+++.+.  +          .|. +.+++++  .|.| .+++ +||+|||+++|||++|++...        
T Consensus        19 ~~~p~tmkA~v~~~~--~~~~~~~~~~~~~~-~~l~~~e--~p~P-~~~~-~eVlVrV~a~gic~sD~~~~~~~~~~~~~   91 (447)
T 4a0s_A           19 APVPDTYLALHLRAE--DADMFKGVADKDVR-KSLRLGE--VPMP-ELAP-DEVLVAVMASSINYNTVWSAMFEPIPTFH   91 (447)
T ss_dssp             SCCCSEEEEEEEEGG--GTTTTTTCSSCCHH-HHCEEEE--EECC-CCCT-TEEEEEEEEEECCHHHHHHHTTCSSCHHH
T ss_pred             cCCChhheeeeeecc--ccccccccccCCCC-CCceEEe--ccCC-CCCC-CeEEEEEEEEEECcHHhhhhccCcccchh
Confidence            357899999999997  4          111 2456655  5556 3488 999999999999999975321        


Q ss_pred             --------CCCCCCCCCC-CCCCCeeEEe-----eCCCCCCCCCEEEe------------------------------cc
Q 037444           66 --------KLDRPSFVDS-FHPGELKFWI-----LHIQNYAKDDLVWG------------------------------ST  101 (339)
Q Consensus        66 --------~~~~~~~~~p-~~~G~e~~G~-----~~v~~~~~Gd~V~~------------------------------~g  101 (339)
                              +.+.....+| .++|||++|+     ++|++|++||||++                              .|
T Consensus        92 ~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G  171 (447)
T 4a0s_A           92 FLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFG  171 (447)
T ss_dssp             HHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSC
T ss_pred             hhhhhcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCC
Confidence                    2111112345 6999999999     78999999999987                              38


Q ss_pred             ceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHh--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE
Q 037444          102 GWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYV  179 (339)
Q Consensus       102 ~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~--~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V  179 (339)
                      +|+||++++++. ++++ |+++++. ++|+++.++.|||++|.+.  +++++|++|||+|++|++|++++|+|+.+|++|
T Consensus       172 ~~aey~~v~~~~-~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~v  248 (447)
T 4a0s_A          172 GLAEYGVVRASQ-LLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIP  248 (447)
T ss_dssp             SSBSEEEEEGGG-EEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             ceeeeeecCHHH-cEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEE
Confidence            999999999999 9999 9996655 6777889999999999743  889999999999999999999999999999999


Q ss_pred             EEEeCCHHHHHHHHHHhCCCeeeeCCChhh------------------HHHHHHHhCCCCccEEEECCChhhHHHHHHhh
Q 037444          180 VGSAGSKEKVDLLKNKFGFDDAFNYKEEPD------------------LDAALKRCFPQGIDIYFENVGGKMLDAVLLNM  241 (339)
Q Consensus       180 ~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~------------------~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l  241 (339)
                      +++++++++++.++ ++|+++++++.+. +                  +.+.+++.+++++|++||++|+..+..+++++
T Consensus       249 i~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l  326 (447)
T 4a0s_A          249 VAVVSSAQKEAAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVA  326 (447)
T ss_dssp             EEEESSHHHHHHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHS
T ss_pred             EEEeCCHHHHHHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHH
Confidence            99999999999998 9999999986543 3                  36778888844999999999999999999999


Q ss_pred             ccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHH
Q 037444          242 RLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAA  321 (339)
Q Consensus       242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a  321 (339)
                      +++|+++.+|...+.     ....+...++.+++++.|+....     .+.+.++++++++|++++.++.+|+|+++++|
T Consensus       327 ~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A  396 (447)
T 4a0s_A          327 RRGGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEA  396 (447)
T ss_dssp             CTTCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHH
T ss_pred             hcCCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHH
Confidence            999999999875432     22345667788888888887766     56677899999999999988899999999999


Q ss_pred             HHHhHcCCccceEEEEe
Q 037444          322 LVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       322 ~~~~~~~~~~gkvvv~~  338 (339)
                      ++.+.+++..||+|+.+
T Consensus       397 ~~~~~~~~~~GKvvv~~  413 (447)
T 4a0s_A          397 CRVVQTSRQVGKVAVLC  413 (447)
T ss_dssp             HHHHHTTCCSSEEEEES
T ss_pred             HHHHhcCCCceEEEEEe
Confidence            99999999999999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.7e-49  Score=350.48  Aligned_cols=298  Identities=15%  Similarity=0.143  Sum_probs=232.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .+|||+++++.    |  +.++++  +.|.| .+++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+  
T Consensus         3 ~tMka~~~~~~----~--~~l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~   71 (315)
T 3goh_A            3 EQHQVWAYQTK----T--HSVTLN--SVDIP-ALAA-DDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIV   71 (315)
T ss_dssp             CEEEEEEEETT----T--TEEEEE--EEECC-CCCT-TEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEE
T ss_pred             cceEEEEEeCC----C--CeeEEE--ecCCC-CCCC-CEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEE
Confidence            46899999852    3  345555  45556 3488 99999999999999999999886542 46789999999999  


Q ss_pred             ---eCCCCCCCCCEEEe------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEE
Q 037444           86 ---LHIQNYAKDDLVWG------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVY  156 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vl  156 (339)
                         +++++|++||||++      .|+|+||++++++. ++++ |++++.. ++|+++++++|||++| +.+++++|++||
T Consensus        72 ~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~Vl  147 (315)
T 3goh_A           72 KVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDR-VMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQREVL  147 (315)
T ss_dssp             EECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTS-EEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCCEEE
T ss_pred             EeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHH-hccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCCEEE
Confidence               78889999999998      48999999999999 9999 9996554 6778999999999999 889999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDA  236 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~  236 (339)
                      |+|+ |++|++++|+|+.+|++|++++ ++++++.++ ++|++++++     + .+++    ++++|+||||+|++.+..
T Consensus       148 V~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~~g~~~~~~  214 (315)
T 3goh_A          148 IVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDAVNSQNAAA  214 (315)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC-------T
T ss_pred             EECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEECCCchhHHH
Confidence            9999 9999999999999999999999 889999999 999998884     2 1222    449999999999987789


Q ss_pred             HHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc---hhHHHHHHHHHHHHcCCceeeeeeee
Q 037444          237 VLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH---LYPKFLELVIPAIREGKMVYVEDIAE  313 (339)
Q Consensus       237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~l~~g~~~~~~~~~~  313 (339)
                      ++++|+++|+++.+|.....    .........+..+++++.++.....+.   ...+.++++++++++|++++.++.+|
T Consensus       215 ~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~  290 (315)
T 3goh_A          215 LVPSLKANGHIICIQDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIF  290 (315)
T ss_dssp             TGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEE
T ss_pred             HHHHhcCCCEEEEEeCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEe
Confidence            99999999999999753221    000000011223344444443311111   33456889999999999999999999


Q ss_pred             CcccHHHHHHHhHcCCccceEEEEeC
Q 037444          314 GLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       314 ~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +|+++++|++.+.  +..||+|++++
T Consensus       291 ~l~~~~~A~~~~~--~~~gKvvi~~~  314 (315)
T 3goh_A          291 RFEQMIEALDHSE--QTKLKTVLTLN  314 (315)
T ss_dssp             EGGGHHHHHHHHH--HHCCCEEEESC
T ss_pred             cHHHHHHHHHHHH--hcCCcEEEEec
Confidence            9999999999998  67789999874

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=7.2e-48  Score=347.34  Aligned_cols=302  Identities=15%  Similarity=0.106  Sum_probs=252.0

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhh-hhcCCCCCCCCCCCCCCCeeEEe---
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRW-RMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~-~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      |||+++++.  +.     +.++  +.|.|. +++ +||+|||+++|||++|++ ...|...  ..+|.++|||++|+   
T Consensus         1 MkA~~~~~~--~~-----~~~~--e~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~p~v~G~E~~G~V~~   67 (352)
T 3fpc_A            1 MKGFAMLSI--GK-----VGWI--EKEKPA-PGP-FDAIVRPLAVAPCTSDIHTVFEGAIG--ERHNMILGHEAVGEVVE   67 (352)
T ss_dssp             CEEEEEEET--TE-----EEEE--ECCCCC-CCT-TCEEEEEEEEECCHHHHHHHHSCTTC--CCSSEECCCEEEEEEEE
T ss_pred             CeEEEEccC--CC-----ceEE--eCCCCC-CCC-CeEEEEeCEEeEcccchHHHhCCCCC--CCCCcccCCcceEEEEE
Confidence            799999886  43     3554  566664 478 999999999999999999 5577554  35689999999999   


Q ss_pred             --eCCCCCCCCCEEEe---------------------------------ccceeeEEEecCc--cceeeccCCCCCcccc
Q 037444           86 --LHIQNYAKDDLVWG---------------------------------STGWEEYSLVTAP--QLLIKIQHTDVPLSYY  128 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~--~~~~~i~p~~~~~~~~  128 (339)
                        +++++|++||||++                                 .|+|+||+++++.  . ++++ |++++.. +
T Consensus        68 vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~-~~~i-P~~~~~~-~  144 (352)
T 3fpc_A           68 VGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMN-LAHL-PKEIPLE-A  144 (352)
T ss_dssp             ECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHH-CEEC-CTTSCHH-H
T ss_pred             ECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCe-EEEC-CCCCCHH-H
Confidence              78999999999984                                 3789999999976  7 9999 9996555 6


Q ss_pred             ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          129 TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      ++.++.++.|||+++ +.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++ ++|+++++++++.
T Consensus       145 aa~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~  221 (352)
T 3fpc_A          145 AVMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGATDIINYKNG  221 (352)
T ss_dssp             HTTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCCEEECGGGS
T ss_pred             HhhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEEcCCCc
Confidence            778889999999999 7799999999999995 9999999999999999 8999999999999999 9999999999887


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccc--hHHHHhccccccceecc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN--LEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  283 (339)
                       ++.+.+++.+++ ++|+|||++|+ ..+..++++|+++|+++.+|......    .....  ......+++++.++...
T Consensus       222 -~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~----~~~~~~~~~~~~~~~~~i~g~~~~  296 (352)
T 3fpc_A          222 -DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGD----NIDIPRSEWGVGMGHKHIHGGLCP  296 (352)
T ss_dssp             -CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCS----EEEEETTTTGGGTBCEEEEEBCCC
T ss_pred             -CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCC----ceecchhHhhhhccccEEEEeecc
Confidence             999999999988 99999999998 68999999999999999998754321    11111  11223456676665442


Q ss_pred             cccchhHHHHHHHHHHHHcCCceee--eeeeeC-cccHHHHHHHhHcCCc-cceEEEEeC
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYV--EDIAEG-LENAPAALVGLFTGRN-VGKQLVAVA  339 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~--~~~~~~-l~~~~~a~~~~~~~~~-~gkvvv~~~  339 (339)
                      .    ..+.++++++++++|++++.  ++.+|+ |+++++|++.+.+++. .+|+|++++
T Consensus       297 ~----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          297 G----GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             C----HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             C----chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            2    25678999999999999875  677888 9999999999998654 489999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-47  Score=345.44  Aligned_cols=303  Identities=17%  Similarity=0.143  Sum_probs=249.7

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcC-CCC-CCCCCCCCCCCeeE
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK-LDR-PSFVDSFHPGELKF   83 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~-~~~-~~~~~p~~~G~e~~   83 (339)
                      |+++|||+++++.       ..++++  +.|.| .+++ +||+|||+++|||++|++.+.+ ... ....+|.++|||++
T Consensus         1 m~~~mka~~~~~~-------~~l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~   69 (352)
T 1e3j_A            1 MASDNLSAVLYKQ-------NDLRLE--QRPIP-EPKE-DEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEAS   69 (352)
T ss_dssp             ---CCEEEEEEET-------TEEEEE--ECCCC-CCCT-TEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred             CcccCEEEEEEcC-------CcEEEE--EecCC-CCCC-CeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccce
Confidence            4567999999874       234554  56666 3488 9999999999999999998774 221 12246899999999


Q ss_pred             Ee-----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccc
Q 037444           84 WI-----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSY  127 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~  127 (339)
                      |+     +++++|++||||++                               .|+|+||++++++. ++++ |++++  +
T Consensus        70 G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~~--~  145 (352)
T 1e3j_A           70 GTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNVS--L  145 (352)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTSC--H
T ss_pred             EEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHH-eEEC-cCCCC--H
Confidence            99     78899999999985                               37899999999999 9999 99954  4


Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-  206 (339)
                      +.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++ 
T Consensus       146 ~~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~  222 (352)
T 1e3j_A          146 EEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDPA  222 (352)
T ss_dssp             HHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECCTT
T ss_pred             HHHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCccc
Confidence            4444557889999999 7789999999999996 99999999999999999999999999999999 999999999884 


Q ss_pred             hhhHHHHHHHhCC---C-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccccee
Q 037444          207 EPDLDAALKRCFP---Q-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFL  281 (339)
Q Consensus       207 ~~~~~~~v~~~~~---g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (339)
                      . ++.+++++.++   + ++|++||++|+. .+..++++|+++|+++.+|....      ....+...++.+++++.++.
T Consensus       223 ~-~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~  295 (352)
T 1e3j_A          223 K-EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVF  295 (352)
T ss_dssp             T-SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECC
T ss_pred             c-cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEEec
Confidence            5 77788888775   4 899999999975 78999999999999999986332      12345567788899888865


Q ss_pred             cccccchhHHHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcCC-ccceEEEEeC
Q 037444          282 AGDYYHLYPKFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTGR-NVGKQLVAVA  339 (339)
Q Consensus       282 ~~~~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~  339 (339)
                      ..      .+.++++++++++|+++  +.+..+|+|+++++|++.+.+++ ..||+|++++
T Consensus       296 ~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  350 (352)
T 1e3j_A          296 RY------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR  350 (352)
T ss_dssp             SC------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred             cc------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence            42      23478899999999975  45677899999999999999887 6899999874

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=9e-48  Score=348.22  Aligned_cols=302  Identities=15%  Similarity=0.055  Sum_probs=251.3

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeeccccc--------ccCCCCCeEEEEEEEEeeChhhhhhhcCCC-C-CCCCC
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLK--------VAEGSKDTVLLKNLYLSCDPYMRWRMSKLD-R-PSFVD   74 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p--------~~~~~~~evlv~v~~~~i~~~d~~~~~~~~-~-~~~~~   74 (339)
                      +++++|||+++...       +.+++++  .|.|        .+ ++ +||+|||+++|||++|++.+.+.. . ....+
T Consensus         4 ~~~~~mka~~~~~~-------~~l~~~~--~~~P~~~~~~~~~~-~~-~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~   72 (363)
T 3m6i_A            4 SASKTNIGVFTNPQ-------HDLWISE--ASPSLESVQKGEEL-KE-GEVTVAVRSTGICGSDVHFWKHGCIGPMIVEC   72 (363)
T ss_dssp             -CCSCCEEEEECTT-------CCEEEEE--CSSCHHHHHHTCSC-CT-TEEEEEEEEEECCHHHHHHHHHSBSSSCBCCS
T ss_pred             CCcccceeEEEeCC-------CcEEEEE--ecCCccccccCCCc-CC-CeEEEEEeEEeecHhhHHHHcCCCCCCccCCC
Confidence            47789999999753       3456654  5555        44 77 999999999999999999887432 1 12356


Q ss_pred             CCCCCCeeEEe-----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeec
Q 037444           75 SFHPGELKFWI-----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKI  118 (339)
Q Consensus        75 p~~~G~e~~G~-----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i  118 (339)
                      |.++|||++|+     +++++|++||||++                               .|+|+||++++++. ++++
T Consensus        73 p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~-~~~i  151 (363)
T 3m6i_A           73 DHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVW-CHKI  151 (363)
T ss_dssp             CEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGG-EEEC
T ss_pred             CcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhh-EEEC
Confidence            89999999999     78999999999985                               37899999999999 9999


Q ss_pred             cCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhC
Q 037444          119 QHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFG  197 (339)
Q Consensus       119 ~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g  197 (339)
                       |+ ++.. ++|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+||.+|++ |++++++++++++++ ++ 
T Consensus       152 -P~-~s~~-~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-  223 (363)
T 3m6i_A          152 -GN-MSYE-NGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-  223 (363)
T ss_dssp             -TT-CCHH-HHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-
T ss_pred             -CC-CCHH-HHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-
Confidence             98 6665 45555 6889999999 7789999999999997 99999999999999996 999999999999999 88 


Q ss_pred             CCeeeeCC-----ChhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHH
Q 037444          198 FDDAFNYK-----EEPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQL  270 (339)
Q Consensus       198 ~~~v~~~~-----~~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  270 (339)
                      +++++++.     .. ++.+.+++.+++ ++|+||||+|+. .+..++++|+++|+++.+|.....      ...+...+
T Consensus       224 ~~~~~~~~~~~~~~~-~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~  296 (363)
T 3m6i_A          224 CPEVVTHKVERLSAE-ESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE------IQIPFMRA  296 (363)
T ss_dssp             CTTCEEEECCSCCHH-HHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC------CCCCHHHH
T ss_pred             chhcccccccccchH-HHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC------ccccHHHH
Confidence            76666553     24 889999999987 999999999986 789999999999999999874432      23456678


Q ss_pred             HhccccccceecccccchhHHHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcC-CccceEEEEeC
Q 037444          271 IGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTG-RNVGKQLVAVA  339 (339)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv~~~  339 (339)
                      +.+++++.++...      .+.++++++++++|+++  +.++.+|+|+++++|++.+.++ ...+|++++++
T Consensus       297 ~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~  362 (363)
T 3m6i_A          297 SVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSL  362 (363)
T ss_dssp             HHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC
T ss_pred             HhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecC
Confidence            8899988887643      34578899999999994  4577889999999999999987 57789999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=9.9e-48  Score=349.19  Aligned_cols=318  Identities=18%  Similarity=0.235  Sum_probs=251.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEE-EeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--------------C
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKI-TSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--------------P   70 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~-~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--------------~   70 (339)
                      ++++|||+++.++  |.|  ..+++ ++  .|.|.++++ +||+|||.++|||++|++.+.|...              .
T Consensus        18 ~~~~mka~~~~~~--g~~--~~l~~~~~--~p~P~~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~   90 (375)
T 2vn8_A           18 LYFQSMAWVIDKY--GKN--EVLRFTQN--MMMPIIHYP-NEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIK   90 (375)
T ss_dssp             CCCCEEEEEBSSC--CSG--GGCEEEEE--ECCCCCCST-TEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCT
T ss_pred             cCccceeEEeccC--CCc--cceEEecc--ccCCCCCCC-CEEEEEEEEEEcCHHHHHHhccCccccccccccccccccc
Confidence            5678999999887  766  45666 44  555643477 9999999999999999999887531              1


Q ss_pred             CCCCCCCCCCeeEEe-----eCCCCCCCCCEEEe------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhH
Q 037444           71 SFVDSFHPGELKFWI-----LHIQNYAKDDLVWG------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTA  139 (339)
Q Consensus        71 ~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA  139 (339)
                      ...+|.++|||++|+     +++++|++||||++      .|+|+||++++++. ++++ |++++.. ++|+++.+++||
T Consensus        91 ~~~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~ls~~-~Aa~l~~~~~tA  167 (375)
T 2vn8_A           91 GEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNE-VSHK-PKSLTHT-QAASLPYVALTA  167 (375)
T ss_dssp             TTTCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGG-EEEC-CTTSCHH-HHTTSHHHHHHH
T ss_pred             cccCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHH-eeeC-CCCCCHH-HHhhhHHHHHHH
Confidence            122689999999999     78899999999998      48999999999999 9999 9996655 688888899999


Q ss_pred             HHHHHHhcC----CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          140 YAGLYEVCS----PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       140 ~~~l~~~~~----~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      |++|.+.++    +++|++|||+||+|++|++++|+|+.+|++|++++ ++++.+.++ ++|+++++++++. ++.+.++
T Consensus       168 ~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~~  244 (375)
T 2vn8_A          168 WSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLK  244 (375)
T ss_dssp             HHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHHH
T ss_pred             HHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHHh
Confidence            999977788    99999999999999999999999999999999998 678888898 9999999999886 8877776


Q ss_pred             HhCCCCccEEEECCChh--hHHHHHHhhccCCEEEEEecccccCCCCCccccc----hHHHHhccc-cc-cceeccc-cc
Q 037444          216 RCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN----LEQLIGKRI-RL-EGFLAGD-YY  286 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~~~-~~  286 (339)
                      +.  +++|++|||+|+.  .+..++++++++|+++.+|...............    ...++.+++ ++ .+..... +.
T Consensus       245 ~~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  322 (375)
T 2vn8_A          245 SL--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF  322 (375)
T ss_dssp             TS--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred             hc--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEe
Confidence            53  4799999999986  4588999999999999998643210000000000    012333333 22 2332211 11


Q ss_pred             chhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          287 HLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ....+.++++++++++|++++.++.+|+++++++|++.+.+++..||+|+++
T Consensus       323 ~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          323 MASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             CCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             CCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            1235678999999999999988888999999999999999988889999986

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.7e-47  Score=347.96  Aligned_cols=305  Identities=16%  Similarity=0.150  Sum_probs=259.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |.-+|||+++++.  +    +.+++++  .|.| .+++ +||+|||.++|||++|++.+.|.+. ...+|.++|||++|+
T Consensus        14 ~~~~mka~~~~~~--g----~~l~~~~--~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~G~   82 (380)
T 1vj0_A           14 MGLKAHAMVLEKF--N----QPLVYKE--FEIS-DIPR-GSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGR   82 (380)
T ss_dssp             CCEEEEEEEBCST--T----SCCEEEE--EEEC-CCCT-TCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEE
T ss_pred             hhhheEEEEEecC--C----CCeEEEE--ccCC-CCCC-CEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcEEE
Confidence            4578999999886  4    2356654  5556 3478 9999999999999999999988543 235789999999999


Q ss_pred             ----eCCC------CCCCCCEEEe---------------------------------------ccceeeEEEe-cCccce
Q 037444           86 ----LHIQ------NYAKDDLVWG---------------------------------------STGWEEYSLV-TAPQLL  115 (339)
Q Consensus        86 ----~~v~------~~~~Gd~V~~---------------------------------------~g~~~~~~~v-~~~~~~  115 (339)
                          .+|+      +|++||||++                                       .|+|+||+++ +++. +
T Consensus        83 V~~vG~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~-~  161 (380)
T 1vj0_A           83 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD-V  161 (380)
T ss_dssp             EEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC-E
T ss_pred             EEEeCCccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccce-E
Confidence                2456      8999999986                                       3789999999 9998 9


Q ss_pred             eeccCCCCCccccccccCchhhhHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Q 037444          116 IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLK  193 (339)
Q Consensus       116 ~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~  193 (339)
                      +++ |++++.. ++|++..+++|||+++ +..+ +++|++|||+| +|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       162 ~~i-P~~l~~~-~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~  237 (380)
T 1vj0_A          162 LKV-SEKDDLD-VLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE  237 (380)
T ss_dssp             EEE-CTTSCHH-HHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             EEC-CCCCChH-HhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence            999 9994443 2677777999999999 5678 99999999999 79999999999999995 9999999999999999


Q ss_pred             HHhCCCeeeeCC---ChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc-ccCCCCCccccch
Q 037444          194 NKFGFDDAFNYK---EEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS-QYNLEKPEGVHNL  267 (339)
Q Consensus       194 ~~~g~~~v~~~~---~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~  267 (339)
                       ++|++++++++   +. ++.+.+++.+++ ++|+|||++|+ ..+..++++|+++|+++.+|... ..     ....+.
T Consensus       238 -~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~  310 (380)
T 1vj0_A          238 -EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD-----PVPFKV  310 (380)
T ss_dssp             -HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC-----CEEECH
T ss_pred             -HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----CeeEch
Confidence             99999999987   65 888999999988 99999999997 58999999999999999998754 21     123445


Q ss_pred             HH-HHhccccccceecccccchhHHHHHHHHHHHHc--CCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          268 EQ-LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIRE--GKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       268 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~--g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .. ++.+++++.|+....     .+.++++++++++  |++++.+..+|+|+++++|++.+.+++.. |+|++++
T Consensus       311 ~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          311 YEWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             HHHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            55 778999999887655     6789999999999  99988888889999999999999988878 9999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=8.4e-48  Score=352.76  Aligned_cols=308  Identities=17%  Similarity=0.135  Sum_probs=256.3

Q ss_pred             cccceEEEeeccCCCCCCCCe---------------------EEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcC
Q 037444            8 VSNKRVILSNYVTGFPKESDM---------------------KITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK   66 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~---------------------~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~   66 (339)
                      |+|||++++++  +.|.+...                     .++..+.|.|.++++ +||+|||.++|||++|++.+.|
T Consensus         1 ~~m~a~~~~~~--~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~g   77 (404)
T 3ip1_A            1 MSLRAVRLHAK--WDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKP-TEIIIKVKACGICGSDVHMAQT   77 (404)
T ss_dssp             -CEEEEEEEEE--ECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCST-TEEEEEEEEEECCHHHHHHHCB
T ss_pred             CcceEEEecCC--CCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCc-CEEEEEEeEeeeCHHHHHHhcC
Confidence            57899999988  77752221                     345556777742588 9999999999999999999886


Q ss_pred             CCC------CCCCCCCCCCCeeEEe-----eCC------CCCCCCCEEEe------------------------------
Q 037444           67 LDR------PSFVDSFHPGELKFWI-----LHI------QNYAKDDLVWG------------------------------   99 (339)
Q Consensus        67 ~~~------~~~~~p~~~G~e~~G~-----~~v------~~~~~Gd~V~~------------------------------   99 (339)
                      ...      ....+|.++|||++|+     +++      ++|++||||++                              
T Consensus        78 ~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~  157 (404)
T 3ip1_A           78 DEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNV  157 (404)
T ss_dssp             CTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTB
T ss_pred             CCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCC
Confidence            421      1235689999999999     677      78999999997                              


Q ss_pred             ccceeeEEEecCccceeeccCCCCCc-----cccccccCchhhhHHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHH
Q 037444          100 STGWEEYSLVTAPQLLIKIQHTDVPL-----SYYTGILGMPGVTAYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAK  173 (339)
Q Consensus       100 ~g~~~~~~~v~~~~~~~~i~p~~~~~-----~~~aa~l~~~~~tA~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~  173 (339)
                      .|+|+||++++++. ++++ |++++.     ..++|+++.+++|||+++... +++++|++|||+|+ |++|++++|+|+
T Consensus       158 ~G~~aey~~v~~~~-~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak  234 (404)
T 3ip1_A          158 DGAFAEYVKVDAKY-AWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILK  234 (404)
T ss_dssp             CCSSBSEEEEEGGG-EEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHH
T ss_pred             CCCCcceEEechHH-eEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHH
Confidence            37899999999998 9999 988542     225889999999999999655 48999999999997 999999999999


Q ss_pred             HcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChh--hHHHHHHhh----ccCC
Q 037444          174 LAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGK--MLDAVLLNM----RLRG  245 (339)
Q Consensus       174 ~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~--~~~~~~~~l----~~~G  245 (339)
                      .+|+ +|++++++++++++++ ++|+++++++++. ++.+.+++.+++ ++|+||||+|+.  .+..++++|    +++|
T Consensus       235 ~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G  312 (404)
T 3ip1_A          235 HAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINA  312 (404)
T ss_dssp             HTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCC
T ss_pred             HcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCc
Confidence            9999 9999999999999999 9999999999887 999999999988 999999999986  677777788    9999


Q ss_pred             EEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCcee--eeeeeeCcccHHHHHH
Q 037444          246 RIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMVY--VEDIAEGLENAPAALV  323 (339)
Q Consensus       246 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~--~~~~~~~l~~~~~a~~  323 (339)
                      +++.+|.....      ...+...++.+++++.|+.....    .+.++++++++++| +++  .++.+|+|+++++|++
T Consensus       313 ~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~  381 (404)
T 3ip1_A          313 TVAIVARADAK------IPLTGEVFQVRRAQIVGSQGHSG----HGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIK  381 (404)
T ss_dssp             EEEECSCCCSC------EEECHHHHHHTTCEEEECCCCCS----TTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHH
T ss_pred             EEEEeCCCCCC------CcccHHHHhccceEEEEecCCCc----hHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHH
Confidence            99999975432      24567788889999988765331    34678999999999 754  5678899999999999


Q ss_pred             HhHcCCccceEEEEe
Q 037444          324 GLFTGRNVGKQLVAV  338 (339)
Q Consensus       324 ~~~~~~~~gkvvv~~  338 (339)
                      .+.    .||+|+++
T Consensus       382 ~~~----~GKvvl~~  392 (404)
T 3ip1_A          382 RLQ----TDKSLVKV  392 (404)
T ss_dssp             HTT----TCTTCSCE
T ss_pred             HHh----CCcEEEec
Confidence            987    56777665

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.3e-48  Score=347.56  Aligned_cols=300  Identities=16%  Similarity=0.136  Sum_probs=251.5

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe--
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI--   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~--   85 (339)
                      |||++++++  +.|    ++++  +.|.|. +++ +||+|||.++|||++|++.+.|.+..  ...+|.++|||++|+  
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~   70 (343)
T 2dq4_A            1 MRALAKLAP--EEG----LTLV--DRPVPE-PGP-GEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVE   70 (343)
T ss_dssp             CEEEEECSS--SSS----CEEE--ECCCCC-CCT-TEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEE
T ss_pred             CeEEEEeCC--CCc----EEEE--eccCCC-CCC-CEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEE
Confidence            689999886  543    4665  466663 488 99999999999999999998885321  134689999999999  


Q ss_pred             ---eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCcccccccc
Q 037444           86 ---LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGIL  132 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l  132 (339)
                         +++++|++||||++.                              |+|+||++++++. ++++ |++++.. ++|. 
T Consensus        71 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~-  146 (343)
T 2dq4_A           71 AVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAEN-AWVN-PKDLPFE-VAAI-  146 (343)
T ss_dssp             EECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-EEEE-CTTSCHH-HHTT-
T ss_pred             EECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHH-eEEC-CCCCCHH-HHHh-
Confidence               788999999999972                              7899999999998 9999 9995443 3444 


Q ss_pred             CchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          133 GMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       133 ~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      ..++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++ +++++++++. ++.
T Consensus       147 ~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~~-~~~  221 (343)
T 2dq4_A          147 LEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLEE-DLL  221 (343)
T ss_dssp             HHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECTTTS-CHH
T ss_pred             hhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCcc-CHH
Confidence            47888999999647889 9999999999 9999999999999999 9999999999999998 88 9999999886 899


Q ss_pred             HHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccch-HHHHhccccccceecccccchh
Q 037444          212 AALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNL-EQLIGKRIRLEGFLAGDYYHLY  289 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  289 (339)
                      +.+++.+++++|+|||++|+ ..++.++++|+++|+++.+|....      ....+. ..++.+++++.|+....    .
T Consensus       222 ~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~  291 (343)
T 2dq4_A          222 EVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR----L  291 (343)
T ss_dssp             HHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC----T
T ss_pred             HHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC----C
Confidence            99998883399999999998 688999999999999999987432      123445 56788899988876541    1


Q ss_pred             HHHHHHHHHHHHcCCc--eeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          290 PKFLELVIPAIREGKM--VYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       290 ~~~l~~~~~~l~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      .+.++++++++++|++  ++.+..+|+++++++|++.+.+++. ||+|++++
T Consensus       292 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            5678999999999995  5667788999999999999998877 99999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=4e-48  Score=349.88  Aligned_cols=303  Identities=14%  Similarity=0.030  Sum_probs=252.4

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      +|.+|||++++++  +.+    +++++.+.|.|. +++ +||+|||+++|||++|++.+.|.+.. ..+|.++|||++|+
T Consensus         3 ~p~~mka~~~~~~--~~~----l~~~~~~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~   73 (360)
T 1piw_A            3 YPEKFEGIAIQSH--EDW----KNPKKTKYDPKP-FYD-HDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGK   73 (360)
T ss_dssp             TTTCEEEEEECCS--SST----TSCEEEEECCCC-CCT-TEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEE
T ss_pred             CChheEEEEEecC--CCC----eeEEeccccCCC-CCC-CeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEE
Confidence            6778999999886  544    345441255563 478 99999999999999999999886532 35689999999999


Q ss_pred             -----eCCC-CCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCC
Q 037444           86 -----LHIQ-NYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHT  121 (339)
Q Consensus        86 -----~~v~-~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~  121 (339)
                           ++++ +|++||||+.                                      .|+|+||++++++. ++++ |+
T Consensus        74 V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~  151 (360)
T 1piw_A           74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-PE  151 (360)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-CT
T ss_pred             EEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhh-eEEC-CC
Confidence                 7888 9999999931                                      27899999999998 9999 99


Q ss_pred             CCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee
Q 037444          122 DVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA  201 (339)
Q Consensus       122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v  201 (339)
                      +++.. ++|++++++.|||+++.+ +++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|++++
T Consensus       152 ~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v  227 (360)
T 1piw_A          152 NIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHY  227 (360)
T ss_dssp             TSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEE
T ss_pred             CCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCEE
Confidence            96554 688899999999999965 89999999999999 99999999999999999999999999999999 8999999


Q ss_pred             eeCCChhhHHHHHHHhCCCCccEEEECCCh---hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccc
Q 037444          202 FNYKEEPDLDAALKRCFPQGIDIYFENVGG---KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLE  278 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (339)
                      +++++..++.+.+.    +++|+|||++|+   ..+..++++|+++|+++.+|....  .    ...+...++.+++++.
T Consensus       228 ~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~--~----~~~~~~~~~~~~~~i~  297 (360)
T 1piw_A          228 IATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ--H----EMLSLKPYGLKAVSIS  297 (360)
T ss_dssp             EEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS--S----CCEEECGGGCBSCEEE
T ss_pred             EcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC--c----cccCHHHHHhCCeEEE
Confidence            98764213333332    589999999998   678899999999999999987542  0    1233345667888888


Q ss_pred             ceecccccchhHHHHHHHHHHHHcCCceeeeeeeeCccc--HHHHHHHhHcCCccceEEEEeC
Q 037444          279 GFLAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLEN--APAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       279 ~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ++....     .+.++++++++++|++++.+ .+|++++  +++|++.+.+++..||+|++++
T Consensus       298 g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          298 YSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             ECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             EEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            876655     67789999999999999887 7899999  9999999999888899999863

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.1e-47  Score=342.78  Aligned_cols=300  Identities=15%  Similarity=0.110  Sum_probs=249.9

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~   85 (339)
                      |+|||+++++.       ..++++  +.|.| .+++ +||+|||.++|||++|++.+.+....  ...+|.++|||++|+
T Consensus         6 ~~mka~~~~~~-------~~l~~~--~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~   74 (356)
T 1pl8_A            6 PNNLSLVVHGP-------GDLRLE--NYPIP-EPGP-NEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (356)
T ss_dssp             CCCEEEEEEET-------TEEEEE--ECCCC-CCCT-TEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             cCceEEEEecC-------CcEEEE--EccCC-CCCC-CeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEE
Confidence            77999999874       234554  56666 4488 99999999999999999988742211  124689999999999


Q ss_pred             -----eCCCCCCCCCEEEe-------------------------------ccceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 -----LHIQNYAKDDLVWG-------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~-------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                           ++|++|++||||++                               .|+|+||++++++. ++++ |++++.  +.
T Consensus        75 V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~~--~~  150 (356)
T 1pl8_A           75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVTF--EE  150 (356)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTSCH--HH
T ss_pred             EEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHH-EEEC-cCCCCH--HH
Confidence                 78899999999985                               37899999999998 9999 999544  43


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCC---
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYK---  205 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~---  205 (339)
                      |++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++ ++|++++++++   
T Consensus       151 aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~~  227 (356)
T 1pl8_A          151 GALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKES  227 (356)
T ss_dssp             HHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSCC
T ss_pred             HHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCcccc
Confidence            44557889999999 7789999999999996 9999999999999999 9999999999999999 99999999987   


Q ss_pred             ChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          206 EEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       206 ~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      .. ++.+.+++.+++++|+|||++|+. .+..++++|+++|+++.+|....      ....+...++.+++++.++... 
T Consensus       228 ~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~-  299 (356)
T 1pl8_A          228 PQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFRY-  299 (356)
T ss_dssp             HH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCSC-
T ss_pred             cc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEEeccc-
Confidence            35 788888887766899999999975 78999999999999999986321      1234556778899998887542 


Q ss_pred             ccchhHHHHHHHHHHHHcCCce--eeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          285 YYHLYPKFLELVIPAIREGKMV--YVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                           .+.++++++++++|+++  +.+..+|+++++++|++.+.++ ..||+|++++
T Consensus       300 -----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~  350 (356)
T 1pl8_A          300 -----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCD  350 (356)
T ss_dssp             -----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECC
T ss_pred             -----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCC
Confidence                 23478899999999975  4567789999999999999988 7899999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=8.3e-47  Score=339.72  Aligned_cols=301  Identities=20%  Similarity=0.203  Sum_probs=257.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC-------CCCCCCCCCCee
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP-------SFVDSFHPGELK   82 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~-------~~~~p~~~G~e~   82 (339)
                      |||++++++  +.+    ++++  +.|.| .+++ +||+|||.++|||++|++.+.|.+..       ...+|.++|||+
T Consensus         1 Mka~~~~~~--g~~----l~~~--~~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~   70 (347)
T 1jvb_A            1 MRAVRLVEI--GKP----LSLQ--EIGVP-KPKG-PQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI   70 (347)
T ss_dssp             CEEEEECST--TSC----CEEE--ECCCC-CCCT-TCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE
T ss_pred             CeEEEEecC--CCC----eEEE--EeeCC-CCCC-CeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccc
Confidence            689999886  544    4554  46666 3478 99999999999999999998875431       235689999999


Q ss_pred             EEe-----eCCCCCCCCCEEEec------------------------------cceeeEEEecC-ccceeeccCCCCCcc
Q 037444           83 FWI-----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTA-PQLLIKIQHTDVPLS  126 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~-~~~~~~i~p~~~~~~  126 (339)
                      +|+     +++++|++||||+++                              |+|+||+++++ +. ++++  ++++..
T Consensus        71 ~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~~~~~  147 (347)
T 1jvb_A           71 AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKY-MYKL--RRLNAV  147 (347)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGG-EEEC--SSSCHH
T ss_pred             eEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccc-eEEe--CCCCHH
Confidence            999     788999999999752                              78999999999 88 9998  564444


Q ss_pred             ccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          127 YYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       127 ~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                       +++++++++.|||+++. .+++++|++|||+|++|++|++++|+|+.. |++|+++++++++.+.++ ++|+++++++.
T Consensus       148 -~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~  224 (347)
T 1jvb_A          148 -EAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINAS  224 (347)
T ss_dssp             -HHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETT
T ss_pred             -HcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEecCC
Confidence             57789999999999995 589999999999999889999999999999 999999999999999998 89999999988


Q ss_pred             ChhhHHHHHHHhCC-CCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          206 EEPDLDAALKRCFP-QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       206 ~~~~~~~~v~~~~~-g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      +. ++.+.+.+.+. +++|++||++|+. .+..++++|+++|+++.+|.....    .  ..+...++.+++++.++...
T Consensus       225 ~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~----~--~~~~~~~~~~~~~i~g~~~~  297 (347)
T 1jvb_A          225 MQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD----L--HYHAPLITLSEIQFVGSLVG  297 (347)
T ss_dssp             TS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC----C--CCCHHHHHHHTCEEEECCSC
T ss_pred             Cc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC----C--CCCHHHHHhCceEEEEEecc
Confidence            86 88888888887 5899999999986 889999999999999999875411    1  34556678889999887765


Q ss_pred             cccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .     .+.++++++++++|++++.++.+|+|+++++|++.+.+++..||+|+++
T Consensus       298 ~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          298 N-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             C-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             C-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            5     6789999999999999988888899999999999999998889999975

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.3e-47  Score=342.93  Aligned_cols=297  Identities=21%  Similarity=0.187  Sum_probs=231.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC-CCCCCCCCCCeeEEe-
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP-SFVDSFHPGELKFWI-   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~-~~~~p~~~G~e~~G~-   85 (339)
                      .+|||++++++  +.+    ++++  +.|.|. +++ +||+|||+++|||++|++.+.|.+.. ...+|.++|||++|+ 
T Consensus         2 ~~mka~~~~~~--g~~----l~~~--~~~~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V   71 (344)
T 2h6e_A            2 VKSKAALLKKF--SEP----LSIE--DVNIPE-PQG-EEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTI   71 (344)
T ss_dssp             EEEEBCEECSC--CC-----------EEEECC-CCT-TCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEE
T ss_pred             ceeEEEEEecC--CCC----CeEE--EeeCCC-CCC-CEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEE
Confidence            36899999886  533    4554  455563 478 99999999999999999999886531 235689999999999 


Q ss_pred             ----eCCCCCCCCCEEEec------------------------------cceeeEEEec-CccceeeccCCCCCcccccc
Q 037444           86 ----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVT-APQLLIKIQHTDVPLSYYTG  130 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~-~~~~~~~i~p~~~~~~~~aa  130 (339)
                          ++ ++|++||||+++                              |+|+||++++ ++. ++++  ++++.. ++|
T Consensus        72 ~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~-~~~i--~~l~~~-~aa  146 (344)
T 2h6e_A           72 VEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW-LVKL--NSLSPV-EAA  146 (344)
T ss_dssp             EEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGG-EEEE--SSSCHH-HHG
T ss_pred             EEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCccc-EEEe--CCCCHH-Hhh
Confidence                66 889999999753                              7899999999 998 9998  564444 578


Q ss_pred             ccCchhhhHHHHHHHh----cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          131 ILGMPGVTAYAGLYEV----CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~----~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      ++++++.|||+++.+.    +++ +|++|||+|+ |++|++++|+|+.+  |++|+++++++++++.++ ++|+++++++
T Consensus       147 ~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~  223 (344)
T 2h6e_A          147 PLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYVSEM  223 (344)
T ss_dssp             GGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEEECH
T ss_pred             hhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEEecc
Confidence            8999999999999664    288 9999999998 99999999999999  999999999999999999 9999999987


Q ss_pred             CC-hhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhcccccccee
Q 037444          205 KE-EPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFL  281 (339)
Q Consensus       205 ~~-~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (339)
                      ++ . ++   +.+++.+ ++|+|||++|+. .+..++++++++|+++.+|.....      ...+...++.+++++.++.
T Consensus       224 ~~~~-~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~~  293 (344)
T 2h6e_A          224 KDAE-SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR------VSLEAFDTAVWNKKLLGSN  293 (344)
T ss_dssp             HHHH-HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHHHTTCEEEECC
T ss_pred             ccch-HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC------cccCHHHHhhCCcEEEEEe
Confidence            64 3 43   4445556 899999999986 899999999999999999875421      2345567788999998877


Q ss_pred             cccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          282 AGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       282 ~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      ...     .+.++++++++++|++++.+ .+|+|+++++|++.+.+++..||+|+++
T Consensus       294 ~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          294 YGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             SCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             cCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            655     67799999999999999888 8899999999999999888889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=8.4e-47  Score=340.75  Aligned_cols=301  Identities=17%  Similarity=0.135  Sum_probs=248.8

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      ++|+|+++...+    .+  +.+++.  ++|.|. +++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+
T Consensus         6 ~~m~~~a~~~~~----~~--~~l~~~--~~~~p~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~   74 (357)
T 2cf5_A            6 AERKTTGWAARD----PS--GILSPY--TYTLRE-TGP-EDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGE   74 (357)
T ss_dssp             CCCEEEEEEECS----TT--CCEEEE--EEECCC-CCT-TEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEE
T ss_pred             CcceeEEEEEcc----CC--CCcEEE--EecCCC-CCC-CEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEE
Confidence            346667766644    23  345554  456663 478 99999999999999999999885532 35689999999999


Q ss_pred             -----eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCC
Q 037444           86 -----LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTD  122 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~  122 (339)
                           +++++|++||||++                                      .|+|+||++++++. ++++ |++
T Consensus        75 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~  152 (357)
T 2cf5_A           75 VVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKF-VVKI-PEG  152 (357)
T ss_dssp             EEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGG-EEEC-CSS
T ss_pred             EEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhh-EEEC-cCC
Confidence                 78899999999973                                      37899999999998 9999 999


Q ss_pred             CCccccccccCchhhhHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee
Q 037444          123 VPLSYYTGILGMPGVTAYAGLYEVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA  201 (339)
Q Consensus       123 ~~~~~~aa~l~~~~~tA~~~l~~~~~~~-~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v  201 (339)
                      ++.. ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++++|++++
T Consensus       153 ls~~-~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v  229 (357)
T 2cf5_A          153 MAVE-QAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY  229 (357)
T ss_dssp             CCHH-HHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE
T ss_pred             CCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee
Confidence            6554 688899999999999954 6888 9999999995 9999999999999999999999999988887668999999


Q ss_pred             eeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          202 FNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      +++++. +   .+++.+ +++|+|||++|+. .++.++++++++|+++.+|.....     ....+.. ++.+++++.|+
T Consensus       230 i~~~~~-~---~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~~~~~i~g~  298 (357)
T 2cf5_A          230 VIGSDQ-A---KMSELA-DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LMLGRKVITGS  298 (357)
T ss_dssp             EETTCH-H---HHHHST-TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHHHTCEEEEC
T ss_pred             eccccH-H---HHHHhc-CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHhCccEEEEE
Confidence            998763 3   455554 3799999999975 789999999999999999875421     1113344 78889999888


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ....     .+.++++++++++|++++.+ .+|+++++++|++.+.+++..||+|++++
T Consensus       299 ~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~  351 (357)
T 2cf5_A          299 FIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVE  351 (357)
T ss_dssp             CSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETT
T ss_pred             ccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCC
Confidence            7655     56789999999999999876 57999999999999999988899999863

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-47  Score=343.73  Aligned_cols=300  Identities=19%  Similarity=0.176  Sum_probs=248.8

Q ss_pred             ccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-
Q 037444            7 AVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-   85 (339)
Q Consensus         7 ~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-   85 (339)
                      .++|||++..+.  +    +.+++++  .|.|. +++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+ 
T Consensus        20 ~~~~~a~~~~~~--~----~~l~~~~--~p~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V   88 (369)
T 1uuf_A           20 GLKIKAVGAYSA--K----QPLEPMD--ITRRE-PGP-NDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRV   88 (369)
T ss_dssp             ---CEEEEBSST--T----SCCEEEE--CCCCC-CCT-TEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEE
T ss_pred             CceEEEEEEcCC--C----CCcEEEE--ecCCC-CCC-CeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEE
Confidence            367899887653  3    3356654  66663 478 99999999999999999999885432 34689999999999 


Q ss_pred             ----eCCCCCCCCCEEEe---------------------------------------ccceeeEEEecCccceeeccCCC
Q 037444           86 ----LHIQNYAKDDLVWG---------------------------------------STGWEEYSLVTAPQLLIKIQHTD  122 (339)
Q Consensus        86 ----~~v~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~~~~~~~~i~p~~  122 (339)
                          ++|++|++||||++                                       .|+|+||++++++. ++++ |++
T Consensus        89 ~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~-~~~~-P~~  166 (369)
T 1uuf_A           89 VAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RHP  166 (369)
T ss_dssp             EEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CSC
T ss_pred             EEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchh-EEEC-CCC
Confidence                78899999999973                                       17899999999998 9999 998


Q ss_pred             -CCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee
Q 037444          123 -VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA  201 (339)
Q Consensus       123 -~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v  201 (339)
                       ++.. ++|+++.++.|||+++.+ .++++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.++ ++|++++
T Consensus       167 ~ls~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~v  242 (369)
T 1uuf_A          167 QEQLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEV  242 (369)
T ss_dssp             GGGHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEE
T ss_pred             CCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEE
Confidence             8776 688999999999999965 68999999999997 99999999999999999999999999999999 8999999


Q ss_pred             eeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          202 FNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      +++.+. ++.+   ++. +++|+|||++|+. .+..++++|+++|+++.+|.....     ....+...++.+++++.++
T Consensus       243 i~~~~~-~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~  312 (369)
T 1uuf_A          243 VNSRNA-DEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGS  312 (369)
T ss_dssp             EETTCH-HHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEEC
T ss_pred             eccccH-HHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHhCCcEEEEe
Confidence            998875 5433   333 5799999999975 789999999999999999875421     1134456678899999888


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      ....     .+.++++++++++|++++.+. .|+++++++|++.+.+++..||+|++++
T Consensus       313 ~~~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~  365 (369)
T 1uuf_A          313 MIGG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNR  365 (369)
T ss_dssp             CSCC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGG
T ss_pred             ecCC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecC
Confidence            7655     567899999999999998765 5999999999999999888899999863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=6.3e-47  Score=334.19  Aligned_cols=294  Identities=21%  Similarity=0.199  Sum_probs=245.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-eCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-LHI   88 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-~~v   88 (339)
                      |||++++++  +.|.    .++  +.|.|. +++ +||+|||.++|||++|++.+.|.+.....+|.++|||++|+ .  
T Consensus         1 Mka~~~~~~--g~~~----~l~--~~~~p~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~--   68 (302)
T 1iz0_A            1 MKAWVLKRL--GGPL----ELV--DLPEPE-AEE-GEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE--   68 (302)
T ss_dssp             CEEEEECST--TSCE----EEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET--
T ss_pred             CeEEEEcCC--CCch----heE--ECCCCC-CCC-CEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE--
Confidence            689999887  7662    355  566674 488 99999999999999999999886543235789999999998 3  


Q ss_pred             CCCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHH
Q 037444           89 QNYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVG  165 (339)
Q Consensus        89 ~~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G  165 (339)
                           ||||++.   |+|+||++++++. ++++ |++++.. ++|+++.+++|||+++.+.+ +++|++|||+|++|++|
T Consensus        69 -----GdrV~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG  139 (302)
T 1iz0_A           69 -----GRRYAALVPQGGLAERVAVPKGA-LLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALG  139 (302)
T ss_dssp             -----TEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHH
T ss_pred             -----CcEEEEecCCcceeeEEEEcHHH-cEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHH
Confidence                 9999987   8999999999998 9999 9995554 58899999999999997777 99999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC-hhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccC
Q 037444          166 QLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE-EPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLR  244 (339)
Q Consensus       166 ~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~  244 (339)
                      ++++|+|+.+|++|+++++++++++.++ ++|+++++++++ . ++.+.+     +++|++|| +|+..+..++++++++
T Consensus       140 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~~~~~~l~~~  211 (302)
T 1iz0_A          140 TAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVEESLGLLAHG  211 (302)
T ss_dssp             HHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHHHHHTTEEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHHHHHHhhccC
Confidence            9999999999999999999999999998 899999998876 5 655544     57999999 9988999999999999


Q ss_pred             CEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHH---HHHcCCceeeeeeeeCcccHHHH
Q 037444          245 GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP---AIREGKMVYVEDIAEGLENAPAA  321 (339)
Q Consensus       245 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~l~~g~~~~~~~~~~~l~~~~~a  321 (339)
                      |+++.+|......     ...+...++.+++++.++....+ ....+.++++++   ++++|++++.+..+|+++++++|
T Consensus       212 G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A  285 (302)
T 1iz0_A          212 GRLVYIGAAEGEV-----APIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPVFPFAEAEAA  285 (302)
T ss_dssp             EEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHHHH
T ss_pred             CEEEEEeCCCCCC-----CCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHHHHHH
Confidence            9999998754321     12344567788999988776432 223567888999   99999999988889999999999


Q ss_pred             HHHhHcCCccceEEEEe
Q 037444          322 LVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       322 ~~~~~~~~~~gkvvv~~  338 (339)
                      ++.+.+++..||+++++
T Consensus       286 ~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          286 FRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHTTCTTCCBEEEEEC
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999888889999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=3.7e-46  Score=337.51  Aligned_cols=299  Identities=16%  Similarity=0.119  Sum_probs=249.8

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      +||+..+..+  +.+  ..+++.  +.|.| .+++ +||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+   
T Consensus        14 ~mk~~~~~~~--~~~--~~l~~~--~~~~p-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~   84 (366)
T 1yqd_A           14 PVKAFGWAAR--DQS--GHLSPF--NFSRR-ATGE-EDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTE   84 (366)
T ss_dssp             SEEEEEEEEC--STT--CCEEEE--EEEEC-CCCT-TEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEE
T ss_pred             CeeEEEEEEc--CCC--CCcEEE--EccCC-CCCC-CeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEE
Confidence            5677777666  544  345554  45656 3478 99999999999999999999885432 35689999999999   


Q ss_pred             --eCCCCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCCCCCc
Q 037444           86 --LHIQNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHTDVPL  125 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~  125 (339)
                        ++|++|++||||++                                      .|+|+||++++++. ++++ |++++.
T Consensus        85 vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~~-P~~ls~  162 (366)
T 1yqd_A           85 VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERY-IIRF-PDNMPL  162 (366)
T ss_dssp             ECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGG-CEEC-CTTSCT
T ss_pred             ECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhh-EEEC-CCCCCH
Confidence              78899999999973                                      27899999999998 9999 999665


Q ss_pred             cccccccCchhhhHHHHHHHhcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          126 SYYTGILGMPGVTAYAGLYEVCSPK-KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       126 ~~~aa~l~~~~~tA~~~l~~~~~~~-~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      . ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+++++|+++++++
T Consensus       163 ~-~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~  239 (366)
T 1yqd_A          163 D-GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVS  239 (366)
T ss_dssp             T-TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEET
T ss_pred             H-HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEec
Confidence            5 688899999999999954 6788 9999999996 9999999999999999999999999988887658999999998


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      .+. +   .+++.+ +++|+|||++|.. .+..++++++++|+++.+|.....      ...+...++.+++++.++...
T Consensus       240 ~~~-~---~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~  308 (366)
T 1yqd_A          240 RDQ-E---QMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP------LELPAFSLIAGRKIVAGSGIG  308 (366)
T ss_dssp             TCH-H---HHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC------EEECHHHHHTTTCEEEECCSC
T ss_pred             cCH-H---HHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC------CCcCHHHHHhCCcEEEEecCC
Confidence            764 3   455555 4799999999975 789999999999999999875421      234556788899999887765


Q ss_pred             cccchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcCCccceEEEEe
Q 037444          284 DYYHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAV  338 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  338 (339)
                      .     .+.++++++++++|++++.+ .+|+|+++++|++.+.+++..||+|+++
T Consensus       309 ~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          309 G-----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             C-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             C-----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence            5     56789999999999999876 5799999999999999998889999875

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.6e-46  Score=343.76  Aligned_cols=304  Identities=19%  Similarity=0.189  Sum_probs=251.0

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeeccccccc--C---CCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeE
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVA--E---GSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKF   83 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~--~---~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~   83 (339)
                      +|||+++++.       ..+++++  +|.|.+  +   ++ +||+|||.++|||++|++.+.|.+.  ..+|.++|||++
T Consensus         2 ~MkA~~~~~~-------~~l~~~~--~p~P~~~~~~~~~~-~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~~   69 (398)
T 2dph_A            2 GNKSVVYHGT-------RDLRVET--VPYPKLEHNNRKLE-HAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEIT   69 (398)
T ss_dssp             CEEEEEEEET-------TEEEEEE--ECCCCSEETTEECT-TCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCEE
T ss_pred             ccEEEEEEcC-------CCEEEEE--ccCCCCCCCcCCCC-CeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCceE
Confidence            5899999874       2345554  555533  1   23 8999999999999999999988542  356899999999


Q ss_pred             Ee-----eCCCCCCCCCEEEe-----------------------------------------ccceeeEEEecCc--cce
Q 037444           84 WI-----LHIQNYAKDDLVWG-----------------------------------------STGWEEYSLVTAP--QLL  115 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~-----------------------------------------~g~~~~~~~v~~~--~~~  115 (339)
                      |+     ++|++|++||||++                                         .|+|+||++++++  . +
T Consensus        70 G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~-~  148 (398)
T 2dph_A           70 GEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM-L  148 (398)
T ss_dssp             EEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHH-C
T ss_pred             EEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCe-E
Confidence            99     78899999999985                                         2789999999986  7 9


Q ss_pred             eeccCCCCCcccc----ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Q 037444          116 IKIQHTDVPLSYY----TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD  190 (339)
Q Consensus       116 ~~i~p~~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~  190 (339)
                      +++ |++++.. +    +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++
T Consensus       149 ~~i-P~~~~~~-~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  224 (398)
T 2dph_A          149 LKF-GDKEQAM-EKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLK  224 (398)
T ss_dssp             EEC-SSHHHHH-HTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH
T ss_pred             EEC-CCCCChh-hhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence            999 9984443 4    688999999999999 6789999999999996 9999999999999999 9999999999999


Q ss_pred             HHHHHhCCCeeeeCCChhhH-HHHHHHhCCC-CccEEEECCChh---------------hHHHHHHhhccCCEEEEEecc
Q 037444          191 LLKNKFGFDDAFNYKEEPDL-DAALKRCFPQ-GIDIYFENVGGK---------------MLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       191 ~~~~~~g~~~v~~~~~~~~~-~~~v~~~~~g-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .++ ++|++ ++++++. ++ .+.+++.+++ ++|+|||++|+.               .+..++++|+++|+++.+|..
T Consensus       225 ~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          225 LLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             HHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred             HHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence            999 99995 8998876 75 8889998888 899999999975               589999999999999999875


Q ss_pred             cc-cCCC------CCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCce--e--eeeeeeCcccHHHHH
Q 037444          254 SQ-YNLE------KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV--Y--VEDIAEGLENAPAAL  322 (339)
Q Consensus       254 ~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~--~--~~~~~~~l~~~~~a~  322 (339)
                      .. .+..      ......+...++.+++++.++....     .+.++++++++++|+++  +  .++.+|+|+++++|+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~  376 (398)
T 2dph_A          302 VGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGY  376 (398)
T ss_dssp             CSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHH
T ss_pred             cccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHH
Confidence            21 1000      0112345567788899888765433     45688999999999998  6  467889999999999


Q ss_pred             HHhHcCCccceEEEEe
Q 037444          323 VGLFTGRNVGKQLVAV  338 (339)
Q Consensus       323 ~~~~~~~~~gkvvv~~  338 (339)
                      +.+.+++. ||+|+++
T Consensus       377 ~~~~~~~~-gKvvv~~  391 (398)
T 2dph_A          377 AKFDKGSP-AKFVIDP  391 (398)
T ss_dssp             HHHHTTCS-CEEEECT
T ss_pred             HHHhcCCc-eEEEEec
Confidence            99998887 9999976

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-45  Score=338.13  Aligned_cols=304  Identities=18%  Similarity=0.162  Sum_probs=248.3

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCC-CCCe------EEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCe
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEG-SKDT------VLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEL   81 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~-~~~e------vlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e   81 (339)
                      +|||+++++.       ..++++  +.|.|.+ + + +|      |+|||.++|||++|++.+.|.+.  .++|.++|||
T Consensus         2 ~Mka~~~~~~-------~~l~~~--~~p~P~~-~~~-~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~p~v~GhE   68 (398)
T 1kol_A            2 GNRGVVYLGS-------GKVEVQ--KIDYPKM-QDP-RGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHE   68 (398)
T ss_dssp             CEEEEEEEET-------TEEEEE--EECCCCS-BCT-TSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCC
T ss_pred             ccEEEEEecC-------CceEEE--EecCCCC-CCC-CcccccceEEEEEEEEeechhhHHHHcCCCC--CCCCcccCcc
Confidence            5899999875       234554  4565633 4 6 78      99999999999999999988542  3568999999


Q ss_pred             eEEe-----eCCCCCCCCCEEEe----------------------------------------ccceeeEEEecCc--cc
Q 037444           82 KFWI-----LHIQNYAKDDLVWG----------------------------------------STGWEEYSLVTAP--QL  114 (339)
Q Consensus        82 ~~G~-----~~v~~~~~Gd~V~~----------------------------------------~g~~~~~~~v~~~--~~  114 (339)
                      ++|+     +++++|++||||++                                        .|+|+||+++++.  . 
T Consensus        69 ~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~-  147 (398)
T 1kol_A           69 ITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFN-  147 (398)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHH-
T ss_pred             cEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCe-
Confidence            9999     78899999999973                                        2789999999986  7 


Q ss_pred             eeeccCCCCCcccc----ccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH
Q 037444          115 LIKIQHTDVPLSYY----TGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKV  189 (339)
Q Consensus       115 ~~~i~p~~~~~~~~----aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~  189 (339)
                      ++++ |++++.. +    +++++.++.|||+++. .+++++|++|||+|+ |++|++++|+||++|+ +|++++++++++
T Consensus       148 ~~~~-P~~~~~~-~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          148 LLKL-PDRDKAM-EKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             CEEC-SCHHHHH-HTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             EEEC-CCCcchh-hhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence            9999 9984333 3    5789999999999995 689999999999995 9999999999999999 799999999999


Q ss_pred             HHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChh----------------hHHHHHHhhccCCEEEEEec
Q 037444          190 DLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGK----------------MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       190 ~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.++ ++|++ +++++..+++.+.+++.+++ ++|+|||++|+.                .+..++++|+++|+++.+|.
T Consensus       224 ~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~  301 (398)
T 1kol_A          224 AHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL  301 (398)
T ss_dssp             HHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             HHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence            9998 99997 78887651388899998887 899999999975                68899999999999999987


Q ss_pred             c-cccCCC------CCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCce---eeeeeeeCcccHHHHH
Q 037444          253 I-SQYNLE------KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV---YVEDIAEGLENAPAAL  322 (339)
Q Consensus       253 ~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~---~~~~~~~~l~~~~~a~  322 (339)
                      . .+....      ..........++.+++++.+....     ..+.++++++++++|+++   +.++.+|+|+++++|+
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~  376 (398)
T 1kol_A          302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGY  376 (398)
T ss_dssp             CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHH
T ss_pred             ccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHH
Confidence            5 211100      001233455677788887765432     256788999999999998   4567889999999999


Q ss_pred             HHhHcCCccceEEEEe
Q 037444          323 VGLFTGRNVGKQLVAV  338 (339)
Q Consensus       323 ~~~~~~~~~gkvvv~~  338 (339)
                      +.+.+++. ||+|+++
T Consensus       377 ~~~~~~~~-gKvvi~~  391 (398)
T 1kol_A          377 GEFDAGVP-KKFVIDP  391 (398)
T ss_dssp             HHHHHTCS-CEEEECT
T ss_pred             HHHhCCCc-eEEEEEe
Confidence            99998887 9999976

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=7.9e-47  Score=341.05  Aligned_cols=293  Identities=12%  Similarity=0.081  Sum_probs=248.6

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCC---CCCCCCeeEEe-
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVD---SFHPGELKFWI-   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~---p~~~G~e~~G~-   85 (339)
                      |||+++++.  +.+    ++++  +.|.|. +++ +||+|||+++|||++|++.+.|.+.. ..+   |.++|||++|+ 
T Consensus         1 MkA~~~~~~--~~~----l~~~--~~p~P~-~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~GV~   69 (357)
T 2b5w_A            1 MKAIAVKRG--EDR----PVVI--EKPRPE-PES-GEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVGVV   69 (357)
T ss_dssp             CEEEEEETT--CSS----CEEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEEEE
T ss_pred             CeEEEEeCC--CCc----eEEE--ECCCCC-CCc-CEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEEEE
Confidence            689999886  543    4665  466663 478 99999999999999999999886432 345   88999999998 


Q ss_pred             ---eCCCCCCCCCEEEec-----------------------------------cceeeEEEecCccceeeccCCCCCccc
Q 037444           86 ---LHIQNYAKDDLVWGS-----------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSY  127 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~-----------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~  127 (339)
                         ++ ++|++||||++.                                   |+|+||++++++. ++++ |++++   
T Consensus        70 ~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~~~---  143 (357)
T 2b5w_A           70 VDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKY-LVRI-PRSQA---  143 (357)
T ss_dssp             EECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGG-EEEC-CGGGS---
T ss_pred             EECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHH-eEEC-CCCcc---
Confidence               67 889999999853                                   7899999999999 9999 99954   


Q ss_pred             cccccCchhhhHHHHHHHhcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHcCCE-EEEEeCCHH---HHHHHHHH
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKG------EYVYVSAASGAVGQLV-GQFA-KLAGCY-VVGSAGSKE---KVDLLKNK  195 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g------~~vlI~ga~g~~G~~a-i~la-~~~ga~-V~~~~~~~~---~~~~~~~~  195 (339)
                      ++|+++.+++|||+++ +.+++++|      ++|||+|+ |++|+++ +|+| +.+|++ |++++++++   +++.++ +
T Consensus       144 ~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~  220 (357)
T 2b5w_A          144 ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E  220 (357)
T ss_dssp             TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H
T ss_pred             hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H
Confidence            5677899999999999 66889999      99999998 9999999 9999 999996 999999988   999998 9


Q ss_pred             hCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHH----
Q 037444          196 FGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQL----  270 (339)
Q Consensus       196 ~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~----  270 (339)
                      +|++++ ++++. ++.+ +++. .+++|+|||++|+. .+..++++++++|+++.+|.....     ....+...+    
T Consensus       221 lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~  291 (357)
T 2b5w_A          221 LDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AFEVDAGAFHREM  291 (357)
T ss_dssp             TTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CCCCCHHHHHHHH
T ss_pred             cCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----CceecHHHHhHHH
Confidence            999999 98876 7777 8877 55999999999985 889999999999999999875421     123344555    


Q ss_pred             HhccccccceecccccchhHHHHHHHHHHHHcC--C-ceeeeeeeeCcccHHHHHHHhHcCCccceEEEEeC
Q 037444          271 IGKRIRLEGFLAGDYYHLYPKFLELVIPAIREG--K-MVYVEDIAEGLENAPAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g--~-~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +.+++++.++....     .+.++++++++++|  + +.+.++.+|+|+++++|++.+   ...||+|++++
T Consensus       292 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~  355 (357)
T 2b5w_A          292 VLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFS  355 (357)
T ss_dssp             HHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECC
T ss_pred             HhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEec
Confidence            78899998877655     67899999999999  8 677788889999999999988   35789999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3.4e-46  Score=365.98  Aligned_cols=302  Identities=16%  Similarity=0.151  Sum_probs=256.1

Q ss_pred             EEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----eC
Q 037444           13 VILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----LH   87 (339)
Q Consensus        13 ~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----~~   87 (339)
                      +.+..+  |.+  +.+.+...+.|.| ++++ +||+|||+++|||++|++.+.|.+    +.|.++|||++|+     ++
T Consensus       213 l~~~~~--G~~--~~L~~~~~~~p~~-~~~~-~eVlV~V~a~gin~~D~~~~~G~~----~~~~~lG~E~aG~V~~vG~~  282 (795)
T 3slk_A          213 LEATRP--GSL--DGLALVDEPTATA-PLGD-GEVRIAMRAAGVNFRDALIALGMY----PGVASLGSEGAGVVVETGPG  282 (795)
T ss_dssp             EEESST--TSS--TTEEECCCHHHHS-CCCS-SEEEEEEEEEEECHHHHHHTTTCC----SSCCCSCCCEEEEEEEECSS
T ss_pred             EecCCC--CCc--cceEEEeCCccCC-CCCC-CEEEEEEEEEccCHHHHHHHcCCC----CCCccccceeEEEEEEeCCC
Confidence            444444  666  6677766555444 4588 999999999999999999998854    3466899999999     88


Q ss_pred             CCCCCCCCEEEec--cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHH
Q 037444           88 IQNYAKDDLVWGS--TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVG  165 (339)
Q Consensus        88 v~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G  165 (339)
                      |++|++||||+++  |+|+||++++++. ++++ |++++.. ++|++++.++|||++|.+.+++++|++|||+|++|++|
T Consensus       283 V~~~~vGDrV~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG  359 (795)
T 3slk_A          283 VTGLAPGDRVMGMIPKAFGPLAVADHRM-VTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVG  359 (795)
T ss_dssp             CCSSCTTCEEEECCSSCSSSEEEEETTS-EEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHH
T ss_pred             CCcCCCCCEEEEEecCCCcCEEEeehHH-EEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHH
Confidence            9999999999987  8999999999999 9999 9996555 68899999999999998889999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccC
Q 037444          166 QLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLR  244 (339)
Q Consensus       166 ~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~  244 (339)
                      ++++|+||.+|++|+++++++ +.+.+  ++|+++++++++. ++.+.+++.++| |+|+|||++|++.+..++++|+++
T Consensus       360 ~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~  435 (795)
T 3slk_A          360 MAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRG  435 (795)
T ss_dssp             HHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTC
T ss_pred             HHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCC
Confidence            999999999999999999665 55544  3899999999987 999999999998 999999999999999999999999


Q ss_pred             CEEEEEecccccCCCCCccccchHHHHhccccccceecccc-cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHH
Q 037444          245 GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALV  323 (339)
Q Consensus       245 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~  323 (339)
                      |+++.+|.....       .........+++++.++.+... +....+.++++++++++|++++.+..+|+++++++||+
T Consensus       436 Gr~v~iG~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~  508 (795)
T 3slk_A          436 GRFLELGKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALR  508 (795)
T ss_dssp             EEEEECCSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHH
T ss_pred             CEEEEecccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHH
Confidence            999999874321       1111222346777666655332 44556789999999999999998889999999999999


Q ss_pred             HhHcCCccceEEEEe
Q 037444          324 GLFTGRNVGKQLVAV  338 (339)
Q Consensus       324 ~~~~~~~~gkvvv~~  338 (339)
                      .+.+++..||+|+++
T Consensus       509 ~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          509 HLSQARHVGKLVLTM  523 (795)
T ss_dssp             HHHHTCCCBEEEEEC
T ss_pred             HHhcCCccceEEEec
Confidence            999999999999986

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=7.9e-47  Score=343.31  Aligned_cols=307  Identities=16%  Similarity=0.128  Sum_probs=249.4

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC------------------
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR------------------   69 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~------------------   69 (339)
                      .+|||++....    +  .  .++..+.|.| .+++ +||+|||++++||++|++.+.|.+.                  
T Consensus         6 ~~mka~v~~~~----~--~--~l~~~~~~~P-~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~   75 (379)
T 3iup_A            6 LQLRSRIKSSG----E--L--ELSLDSIDTP-HPGP-DEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTAR   75 (379)
T ss_dssp             EEEEEEECTTS----E--E--EEEEEEEECC-CCCT-TEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred             hhHHHHHhcCC----C--C--ceEEEeccCC-CCCC-CEEEEEEEEEecCHHHHHHhcCCcccccccccccccccccccc
Confidence            56898877542    2  2  3444556666 3488 9999999999999999999887521                  


Q ss_pred             ----------CCCCCCCCCCCeeEEe-----eCC-CCCCCCCEEEec--cceeeEEEecCccceeeccCCCCCccccccc
Q 037444           70 ----------PSFVDSFHPGELKFWI-----LHI-QNYAKDDLVWGS--TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGI  131 (339)
Q Consensus        70 ----------~~~~~p~~~G~e~~G~-----~~v-~~~~~Gd~V~~~--g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~  131 (339)
                                ....+|.++|||++|+     ++| ++|++||||++.  |+|+||++++++. ++++ |++++.. ++|+
T Consensus        76 ~p~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~  152 (379)
T 3iup_A           76 VPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQ-CLVL-PEGATPA-DGAS  152 (379)
T ss_dssp             CCHHHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGG-EEEC-CTTCCHH-HHTT
T ss_pred             CccccccccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHH-eEEC-CCCCCHH-HHHh
Confidence                      0124688999999999     666 789999999998  8999999999998 9999 9996665 6888


Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSA-ASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~g-a~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      +++.++|||+++.. .. ++|++|||+| |+|++|++++|+|+.+|++|+++++++++++.++ ++|+++++++++. ++
T Consensus       153 l~~~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~  228 (379)
T 3iup_A          153 SFVNPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAASP-TF  228 (379)
T ss_dssp             SSHHHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTST-TH
T ss_pred             hhhhHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCCh-HH
Confidence            99999999988754 44 8999999996 7899999999999999999999999999999999 9999999999987 99


Q ss_pred             HHHHHHhCCC-CccEEEECCChh-hHHHHHHhhc-----cC-----------CEEEEEecccccCCCCCccccchHHHHh
Q 037444          211 DAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMR-----LR-----------GRIAVCGMISQYNLEKPEGVHNLEQLIG  272 (339)
Q Consensus       211 ~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~  272 (339)
                      .+.+++.+++ ++|+||||+|+. .+..++++++     ++           |+++.+|.....       ......++.
T Consensus       229 ~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~~~~~  301 (379)
T 3iup_A          229 MQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFNRNFG  301 (379)
T ss_dssp             HHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEECCCSC
T ss_pred             HHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------ccccccccc
Confidence            9999999987 999999999975 6678888885     44           555555543221       112233456


Q ss_pred             ccccccceecccc-----cchhHHHHHHHHHHHHcCCceeeeeeeeCcccH--HHHHHHhHcCCccceEEEEeC
Q 037444          273 KRIRLEGFLAGDY-----YHLYPKFLELVIPAIREGKMVYVEDIAEGLENA--PAALVGLFTGRNVGKQLVAVA  339 (339)
Q Consensus       273 ~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvv~~~  339 (339)
                      +++++.|+....+     ++...+.++++++++.+ .+.+.++.+|+|+++  ++|++.+.+++..||+|++++
T Consensus       302 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~  374 (379)
T 3iup_A          302 MAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPN  374 (379)
T ss_dssp             SCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETT
T ss_pred             cceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCC
Confidence            7888888876554     23344566788888888 588888899999999  999999999999999999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=4.2e-44  Score=324.27  Aligned_cols=297  Identities=13%  Similarity=0.105  Sum_probs=240.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcC--CCCCCCCC---CCCCCCeeEE
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSK--LDRPSFVD---SFHPGELKFW   84 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~--~~~~~~~~---p~~~G~e~~G   84 (339)
                      |||+++++.  +.+    +++++  .|.|.+..+ +||+|||.++|||++|++.+.|  .+. ...+   |.++|||++|
T Consensus         1 MkA~~~~~~--g~~----l~~~~--~~~P~~~~~-~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~~~p~v~G~E~~G   70 (366)
T 2cdc_A            1 MKAIIVKPP--NAG----VQVKD--VDEKKLDSY-GKIKIRTIYNGICGADREIVNGKLTLS-TLPKGKDFLVLGHEAIG   70 (366)
T ss_dssp             CEEEEECTT--SCC----CEEEE--CCGGGSCCC-SSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEE
T ss_pred             CeEEEEeCC--CCc----eEEEE--CcCCCCCCC-CEEEEEEEEEeeccccHHHHcCCCCCC-CCCcCCCCCcCCcceEE
Confidence            689999886  542    56654  555544232 8999999999999999999988  443 1245   8999999999


Q ss_pred             e---eCCCCCCCCCEEEe---------------------------------ccceeeEEEecCccceeeccCCCCCcccc
Q 037444           85 I---LHIQNYAKDDLVWG---------------------------------STGWEEYSLVTAPQLLIKIQHTDVPLSYY  128 (339)
Q Consensus        85 ~---~~v~~~~~Gd~V~~---------------------------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~  128 (339)
                      +   ++ ++|++||||++                                 .|+|+||++++++. ++++ |++++   +
T Consensus        71 ~V~~~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~-~~~i-P~~l~---~  144 (366)
T 2cdc_A           71 VVEESY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKY-LVKI-PKSIE---D  144 (366)
T ss_dssp             EECSCC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGG-EEEE-CGGGT---T
T ss_pred             EEEeCC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHH-eEEC-cCCcc---h
Confidence            9   56 78999999984                                 27899999999998 9999 99955   4


Q ss_pred             ccccCchhhhHHHHHH--H--hcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHH
Q 037444          129 TGILGMPGVTAYAGLY--E--VCSPK--K-------GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK---EKVDLL  192 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~--~--~~~~~--~-------g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~---~~~~~~  192 (339)
                      .|+++.++.|||+++.  +  .++++  +       |++|||+|+ |++|++++|+|+.+|++|+++++++   ++.+.+
T Consensus       145 ~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~  223 (366)
T 2cdc_A          145 IGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI  223 (366)
T ss_dssp             TGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH
T ss_pred             hhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH
Confidence            4568899999999996  4  68888  8       999999999 9999999999999999999999998   888989


Q ss_pred             HHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh-hH-HHHHHhhccCCEEEEEecccccCCCCCccccchHH-
Q 037444          193 KNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-ML-DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQ-  269 (339)
Q Consensus       193 ~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-  269 (339)
                      + ++|++++ + .+  ++.+.+++ +.+++|++||++|+. .+ +.++++|+++|+++.+|.....     ....+... 
T Consensus       224 ~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~  292 (366)
T 2cdc_A          224 E-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG-----SVPLDYKTL  292 (366)
T ss_dssp             H-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC-----EEEEEHHHH
T ss_pred             H-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC-----ccccChhhh
Confidence            8 9999888 7 43  55566666 446899999999985 77 8999999999999999875431     12344555 


Q ss_pred             --HHhccccccceecccccchhHHHHHHHHHHHHcCC------ceeeeeeeeCcccHHHHHHHh-HcCCccceEEEEeC
Q 037444          270 --LIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGK------MVYVEDIAEGLENAPAALVGL-FTGRNVGKQLVAVA  339 (339)
Q Consensus       270 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~------~~~~~~~~~~l~~~~~a~~~~-~~~~~~gkvvv~~~  339 (339)
                        ++.+++++.|+....     .+.++++++++++|+      +++.++.+|+|+++++|++.+ .++...||+|++++
T Consensus       293 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          293 QEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             HHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence              788999998876644     677899999999999      556777889999999999994 34667899999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=8.1e-36  Score=320.23  Aligned_cols=298  Identities=19%  Similarity=0.193  Sum_probs=243.6

Q ss_pred             CCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCC------CCCCCCCCCeeEEeeCCCCCCCCCEEEe
Q 037444           26 SDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPS------FVDSFHPGELKFWILHIQNYAKDDLVWG   99 (339)
Q Consensus        26 ~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~------~~~p~~~G~e~~G~~~v~~~~~Gd~V~~   99 (339)
                      +.+.+...+...+.+..+ +||+|||.++|+|+.|++...|.+...      ...|.++|+|++|+     +.+||+|++
T Consensus      1542 ~sl~~~~~~~~~~~~l~~-~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~-----V~vGdrV~g 1615 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASC-QDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGR-----DASGRRVMG 1615 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHH-HTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEE-----ETTSCCEEE
T ss_pred             CceEEEecCcccccCCCC-CceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEE-----EccCCEEEE
Confidence            455665433211001125 899999999999999999988865321      12356899999997     458999998


Q ss_pred             c---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC
Q 037444          100 S---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG  176 (339)
Q Consensus       100 ~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g  176 (339)
                      +   |+|+||++++++. ++++ |++++.. ++|+++++++|||+++.+.+++++|++|||+||+|++|++++|+||..|
T Consensus      1616 ~~~~G~~Aeyv~vp~~~-v~~i-Pd~ls~~-eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~G 1692 (2512)
T 2vz8_A         1616 MVPAEGLATSVLLLQHA-TWEV-PSTWTLE-EAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRG 1692 (2512)
T ss_dssp             ECSSCCSBSEEECCGGG-EEEC-CTTSCHH-HHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTT
T ss_pred             eecCCceeeEEEcccce-EEEe-CCCCCHH-HHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcC
Confidence            6   7899999999998 9999 9995555 6888999999999999888999999999999999999999999999999


Q ss_pred             CEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEec
Q 037444          177 CYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       177 a~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ++|++++.++++.+.+++.   +|+++++++++. ++.+.+++.++| |+|+||||++++.+..++++|+++|+++.+|.
T Consensus      1693 a~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~ 1771 (2512)
T 2vz8_A         1693 CRVFTTVGSAEKRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGK 1771 (2512)
T ss_dssp             CEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCC
T ss_pred             CEEEEEeCChhhhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeec
Confidence            9999999999999999842   678999999887 999999999988 99999999998899999999999999999986


Q ss_pred             ccccCCCCCccccchHHHHhccccccceecccc----cchhHHHHHHHHHHHHcCCceeeeeeeeCcccHHHHHHHhHcC
Q 037444          253 ISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY----YHLYPKFLELVIPAIREGKMVYVEDIAEGLENAPAALVGLFTG  328 (339)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~l~~g~~~~~~~~~~~l~~~~~a~~~~~~~  328 (339)
                      .....     .......++.+++++.++....+    +....+.++.+.+++.+|.+++.+..+|+++++++|++.+.++
T Consensus      1772 ~~~~~-----~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g 1846 (2512)
T 2vz8_A         1772 FDLSN-----NHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQG 1846 (2512)
T ss_dssp             HHHHT-----TCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTT
T ss_pred             ccccc-----cCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhcc
Confidence            43221     01112345667888888766443    2234555666666777899998888899999999999999999


Q ss_pred             CccceEEEEe
Q 037444          329 RNVGKQLVAV  338 (339)
Q Consensus       329 ~~~gkvvv~~  338 (339)
                      +..||+|+++
T Consensus      1847 ~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1847 KHIGKVVIQV 1856 (2512)
T ss_dssp             CCSSEEEEEC
T ss_pred             CccceEEEEC
Confidence            9999999986

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.91  E-value=3.7e-24  Score=176.78  Aligned_cols=189  Identities=20%  Similarity=0.309  Sum_probs=143.9

Q ss_pred             eeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Q 037444          115 LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN  194 (339)
Q Consensus       115 ~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~  194 (339)
                      ++++ |++++.. ++|+++.++.|||+++.+..++++|++|||+||+|++|++++|+++..|++|+++++++++.+.++ 
T Consensus         4 ~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-   80 (198)
T 1pqw_A            4 VVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-   80 (198)
T ss_dssp             -----------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-
T ss_pred             eeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-
Confidence            8899 9996555 678888999999999987789999999999999999999999999999999999999999888888 


Q ss_pred             HhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhc
Q 037444          195 KFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGK  273 (339)
Q Consensus       195 ~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  273 (339)
                      ++|++.+++..+. ++.+.+.+.+.+ ++|++||+.|...+..++++|+++|+++.+|......    ...... ..+.+
T Consensus        81 ~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AALAK  154 (198)
T ss_dssp             TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGGTT
T ss_pred             HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHhcC
Confidence            8999888888876 888888887766 8999999999889999999999999999998754311    011121 23457


Q ss_pred             cccccceeccc----ccchhHHHHHHHHHHHHcCCceeeeeee
Q 037444          274 RIRLEGFLAGD----YYHLYPKFLELVIPAIREGKMVYVEDIA  312 (339)
Q Consensus       274 ~~~~~~~~~~~----~~~~~~~~l~~~~~~l~~g~~~~~~~~~  312 (339)
                      ++++.++....    .+....+.++++++++++|++++.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            77776543311    1112356789999999999999865443

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.94  E-value=3.7e-09  Score=94.63  Aligned_cols=145  Identities=14%  Similarity=0.035  Sum_probs=97.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +++|+|+|+ |++|++++++++.+|++|+++.+++++.+.++ ++++..  +++.+.. ++.+.+.     ++|+||+|+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence            489999998 99999999999999999999999999999888 666543  3444433 5544443     599999999


Q ss_pred             Chhh-------HHHHHHhhccCCEEEEEecccccCCCCC-ccccchHHHHhccccccceecccc--c----chh-HHHHH
Q 037444          230 GGKM-------LDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLAGDY--Y----HLY-PKFLE  294 (339)
Q Consensus       230 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~-~~~l~  294 (339)
                      +.+.       ....++.++++|++++++...+.+.... ....+...+..+++++.+......  +    ..+ +..++
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~  318 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP  318 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence            8542       5678899999999999987543211000 011111122345666555432111  1    111 44567


Q ss_pred             HHHHHHHcCC
Q 037444          295 LVIPAIREGK  304 (339)
Q Consensus       295 ~~~~~l~~g~  304 (339)
                      .+++++.+|.
T Consensus       319 ~l~~l~~~G~  328 (361)
T 1pjc_A          319 YVVKLANQGL  328 (361)
T ss_dssp             HHHHHHHHGG
T ss_pred             HHHHHHhCCc
Confidence            8889998874

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.80  E-value=6.7e-08  Score=86.75  Aligned_cols=148  Identities=16%  Similarity=0.075  Sum_probs=91.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++.+|+|+|+ |++|+.+++.++.+|++|+++.+++++.+.+++.+|.....+..+..++.+.+.     ++|+||+|++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g  238 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL  238 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence            4689999998 999999999999999999999999998888873477753333333214444443     5899999998


Q ss_pred             hhh-------HHHHHHhhccCCEEEEEecccccCCCCC-ccccchHHHHhccccccceecccc--cc-----hhHHHHHH
Q 037444          231 GKM-------LDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLAGDY--YH-----LYPKFLEL  295 (339)
Q Consensus       231 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~l~~  295 (339)
                      ...       ...+++.++++|+++.++...+...... ....+...+..+++.+.+.....-  +.     .....++.
T Consensus       239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~  318 (369)
T 2eez_A          239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY  318 (369)
T ss_dssp             -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred             CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence            542       5788899999999999987543111000 011111122345566554432111  11     11345677


Q ss_pred             HHHHHHcCC
Q 037444          296 VIPAIREGK  304 (339)
Q Consensus       296 ~~~~l~~g~  304 (339)
                      +++++.+|.
T Consensus       319 l~~l~~~g~  327 (369)
T 2eez_A          319 VLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHhcCh
Confidence            888887774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.78  E-value=5.1e-08  Score=87.71  Aligned_cols=98  Identities=18%  Similarity=0.135  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|.+|+|+|+ |.+|+.+++.++.+|++|+++.+++++.+.+++.+|+....+.....++.+.+.     ++|+||+|++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~  240 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL  240 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence            5789999997 999999999999999999999999999888873477753333322214444443     5899999997


Q ss_pred             hhh-------HHHHHHhhccCCEEEEEeccc
Q 037444          231 GKM-------LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       231 ~~~-------~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.       ....++.++++|.++.++...
T Consensus       241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~  271 (377)
T 2vhw_A          241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQ  271 (377)
T ss_dssp             CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGT
T ss_pred             cCCCCCcceecHHHHhcCCCCcEEEEEecCC
Confidence            542       578899999999999998643

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.65  E-value=7.7e-09  Score=94.00  Aligned_cols=161  Identities=14%  Similarity=0.083  Sum_probs=113.5

Q ss_pred             CCCeeEEe-----eCCCCCCCCCEEEe------------ccceeeEEEecCccceeeccCCCCCccccccccCchhhhHH
Q 037444           78 PGELKFWI-----LHIQNYAKDDLVWG------------STGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAY  140 (339)
Q Consensus        78 ~G~e~~G~-----~~v~~~~~Gd~V~~------------~g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~  140 (339)
                      .|++.++.     +++.++.+|+.++.            .|++++|+...... ++++ |++  +..+.+....+..++|
T Consensus        77 ~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~-a~~~-~k~--v~~~~~~~~~~~s~a~  152 (404)
T 1gpj_A           77 RGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRR-AINL-GKR--AREETRISEGAVSIGS  152 (404)
T ss_dssp             EHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH-HHHH-HHH--HHHHSSTTCSCCSHHH
T ss_pred             cCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHH-Hhhh-hcc--CcchhhhcCCCccHHH
Confidence            45555555     78888999998732            16788888777777 8888 877  3333344456777888


Q ss_pred             HHHHHhc---CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHH-HHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          141 AGLYEVC---SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKV-DLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       141 ~~l~~~~---~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      .++....   .-.+|++|+|+|+ |++|.++++.++..|+ +|+++.++.++. ++++ ++|++ ++++.   ++.+.+ 
T Consensus       153 ~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~l-  225 (404)
T 1gpj_A          153 AAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDHL-  225 (404)
T ss_dssp             HHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHHH-
T ss_pred             HHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHHh-
Confidence            8774322   1258999999997 9999999999999999 999999999886 4555 88875 44332   443333 


Q ss_pred             HhCCCCccEEEECCChh-hH--HHHHHh--h--ccCCEEEEEecc
Q 037444          216 RCFPQGIDIYFENVGGK-ML--DAVLLN--M--RLRGRIAVCGMI  253 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~-~~--~~~~~~--l--~~~G~~v~~g~~  253 (339)
                          .++|+||+|++.. .+  ...+..  +  +++|.++.++..
T Consensus       226 ----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          226 ----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             ----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             ----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence                2599999999854 22  245555  4  556777777653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.64  E-value=4.3e-08  Score=88.45  Aligned_cols=101  Identities=15%  Similarity=0.124  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCCh--------------hh----HH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEE--------------PD----LD  211 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~--------------~~----~~  211 (339)
                      ++.+|+|+|+ |.+|++++++|+.+|++|+++.+++++.+.++ ++|++.+ ++..+.              .+    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~  248 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  248 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence            6899999996 99999999999999999999999988888888 7998654 232110              00    12


Q ss_pred             HHHHHhCCCCccEEEECC---Chh---h-HHHHHHhhccCCEEEEEeccc
Q 037444          212 AALKRCFPQGIDIYFENV---GGK---M-LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +.+.+... ++|+||+|+   |.+   . ....++.+++++.++.++...
T Consensus       249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~  297 (384)
T 1l7d_A          249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEA  297 (384)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCC
Confidence            22444333 699999999   532   2 368899999999999998643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.46  E-value=6.8e-07  Score=82.41  Aligned_cols=105  Identities=18%  Similarity=0.183  Sum_probs=82.8

Q ss_pred             hhhhHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHH
Q 037444          135 PGVTAYAGLYEVC-SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAA  213 (339)
Q Consensus       135 ~~~tA~~~l~~~~-~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  213 (339)
                      ...++|+++.+.. ...+|++|+|+|. |.+|..+++.++.+|++|+++.+++.+.+.++ ++|++ ++      ++.+.
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~  326 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEA  326 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHH
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHH
Confidence            3456677764332 2789999999996 99999999999999999999999999888887 88885 32      22222


Q ss_pred             HHHhCCCCccEEEECCChh-hHH-HHHHhhccCCEEEEEecc
Q 037444          214 LKRCFPQGIDIYFENVGGK-MLD-AVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  253 (339)
                      +     .++|+|+++++.. .+. ..++.++++|+++.+|..
T Consensus       327 l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          327 I-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             G-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             H-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            2     2689999999975 344 788999999999999874

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.37  E-value=8.5e-07  Score=80.24  Aligned_cols=99  Identities=15%  Similarity=0.081  Sum_probs=73.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee-eCC-------------ChhhH----HH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF-NYK-------------EEPDL----DA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~-~~~-------------~~~~~----~~  212 (339)
                      ++.+|+|+|+ |.+|+.++++|+.+|++|+++.++.++.+.++ ++|++.+. +..             .. ++    ..
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~  247 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME  247 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence            5789999996 99999999999999999999999998888887 88886442 211             11 11    11


Q ss_pred             HHHHhCCCCccEEEECCCh---h---h-HHHHHHhhccCCEEEEEecc
Q 037444          213 ALKRCFPQGIDIYFENVGG---K---M-LDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       213 ~v~~~~~g~~d~vid~~g~---~---~-~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.+... ++|+||++++.   .   . ...+++.+++++.++.++..
T Consensus       248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            2333322 58999999522   1   2 25789999999999999864

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.35  E-value=6.4e-07  Score=75.60  Aligned_cols=103  Identities=14%  Similarity=0.091  Sum_probs=73.5

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHh
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      +.+ ....+.++++||..|+ | .|..++.+++. +.+|+++..+++..+.+++.   .+...-+..... ++.    +.
T Consensus        82 ~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~  152 (248)
T 2yvl_A           82 YIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFK----DA  152 (248)
T ss_dssp             HHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTT----TS
T ss_pred             HHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chh----hc
Confidence            444 5678889999999995 5 69999999998 88999999999888777732   243111111111 211    12


Q ss_pred             C-C-CCccEEEECCCh--hhHHHHHHhhccCCEEEEEec
Q 037444          218 F-P-QGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~-~-g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . . +++|+|+...+.  ..+..+.+.|+++|+++....
T Consensus       153 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          153 EVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             CCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             ccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            2 2 379999998774  478899999999999987643

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.25  E-value=5.3e-06  Score=70.81  Aligned_cols=106  Identities=16%  Similarity=0.220  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|..+||+||++++|.++++.+...|++|+++.+++++.+.+.+++|...   ..|-.+.++..+.+.+...  |++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68899999999999999999999999999999999998877766887632   2344443233333333322  479999


Q ss_pred             EECCChh-----------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          226 FENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +++.|..           .               .+.++..|+++|++|.+++....
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~  164 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS  164 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence            9988731           1               23355677788999999876553

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.25  E-value=1e-06  Score=67.89  Aligned_cols=107  Identities=10%  Similarity=0.081  Sum_probs=76.3

Q ss_pred             hhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          136 GVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       136 ~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      .++++.++.. .....+.+|+|+|+ |.+|.+.++.++..|++|++..+++++.+.+.++++.. +....   ++.+.+.
T Consensus         6 ~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~~   79 (144)
T 3oj0_A            6 VSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLIK   79 (144)
T ss_dssp             CSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHHH
T ss_pred             ccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHhc
Confidence            4567777633 33345899999996 99999999988888999999999999877665478753 22332   3333332


Q ss_pred             HhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          216 RCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                           ++|+||.|++..........+++++.++.++.+
T Consensus        80 -----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           80 -----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             -----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             -----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence                 489999999965221223678888888888763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.10  E-value=1.7e-05  Score=67.18  Aligned_cols=106  Identities=14%  Similarity=0.166  Sum_probs=72.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++.. ..  .|-.+.+++...+.+...  +++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999998899999999999998887776566542 22  244443133333332221  479999


Q ss_pred             EECCChh-----------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          226 FENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +++.|..           .               .+.++..++++|++|.+++....
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~  143 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE  143 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence            9988731           1               12233455668999998875543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=98.00  E-value=5.8e-05  Score=64.34  Aligned_cols=80  Identities=21%  Similarity=0.348  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-e--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-A--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++... +  .|-.+.+++.+.+.++..  +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999999988777665676532 2  233443233333333222  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus       106 vnnAg  110 (266)
T 3grp_A          106 VNNAG  110 (266)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.98  E-value=2.8e-05  Score=69.57  Aligned_cols=102  Identities=14%  Similarity=0.100  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeee-------------CCC--hhhH----H
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFN-------------YKE--EPDL----D  211 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~-------------~~~--~~~~----~  211 (339)
                      ++.+|+|+|+ |.+|+.++++|+.+|++|++..+++++++.++ ++|+..+-.             +..  .+++    .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~  266 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA  266 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence            5789999997 99999999999999999999999999989888 788753211             110  0011    1


Q ss_pred             HHHHHhCCCCccEEEECCChh-------hHHHHHHhhccCCEEEEEecccc
Q 037444          212 AALKRCFPQGIDIYFENVGGK-------MLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ..+.+.. .+.|+||.|+..+       .-+..++.++++..+|+++...+
T Consensus       267 ~~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~G  316 (405)
T 4dio_A          267 ALVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERG  316 (405)
T ss_dssp             HHHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGT
T ss_pred             hHHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCC
Confidence            1222222 1699999996421       34689999999999999976433

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.98  E-value=1.2e-05  Score=71.40  Aligned_cols=104  Identities=18%  Similarity=0.102  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee-e--------CCC---hh---hHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF-N--------YKE---EP---DLDAALK  215 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~-~--------~~~---~~---~~~~~v~  215 (339)
                      ++.+|+|+|+ |.+|+.++++|+.+|++|++..+++++.+.++ ++|++.+- +        +..   .+   .....+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~  260 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE  260 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence            6789999997 99999999999999999999999999999998 88875321 1        000   00   0112222


Q ss_pred             HhCCCCccEEEECCChh-------hHHHHHHhhccCCEEEEEecccccC
Q 037444          216 RCFPQGIDIYFENVGGK-------MLDAVLLNMRLRGRIAVCGMISQYN  257 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~  257 (339)
                      +.. .++|+||.++..+       .-+..++.+++++.+|+++...+-+
T Consensus       261 e~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~  308 (381)
T 3p2y_A          261 DAI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGN  308 (381)
T ss_dssp             HHH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCS
T ss_pred             HHH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCc
Confidence            322 3699999986321       2368999999999999998755443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.98  E-value=9.4e-05  Score=54.21  Aligned_cols=93  Identities=16%  Similarity=0.193  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++.+++++.+.+. ..+... ..+..+.    +.+.+... ++|+||+|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~   76 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA   76 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            3568999998 999999999999999 79999999999888776 566542 2333332    33444433 69999999


Q ss_pred             CChhhHHHHH-HhhccCCEEEEE
Q 037444          229 VGGKMLDAVL-LNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~~~~~~~-~~l~~~G~~v~~  250 (339)
                      ++........ .+...+..++.+
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           77 APFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCchhhHHHHHHHHHhCCCEEEe
Confidence            9865333333 444445555544

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.96  E-value=3.3e-05  Score=66.26  Aligned_cols=98  Identities=12%  Similarity=0.077  Sum_probs=72.8

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe--eeeCCChhhHHHHHHHhCCC
Q 037444          146 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD--AFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       146 ~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .++++++++||.+|. |+.|..++.+|+..|++|+++..+++..+.+++.   .|.+.  ++..+.. +       +.++
T Consensus       117 la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~-~-------l~d~  187 (298)
T 3fpf_A          117 LGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDET-V-------IDGL  187 (298)
T ss_dssp             HTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGG-G-------GGGC
T ss_pred             HcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchh-h-------CCCC
Confidence            468899999999994 7777777888888899999999999988777732   35422  2222222 2       2235


Q ss_pred             CccEEEECCCh----hhHHHHHHhhccCCEEEEEec
Q 037444          221 GIDIYFENVGG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .||+|+.....    ..+.++.+.|+++|+++....
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            89999976553    378899999999999987653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.95  E-value=9e-05  Score=63.03  Aligned_cols=80  Identities=11%  Similarity=0.147  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.++++.. ..  .|-.+.+++.+.+.+...  +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4678999999999999999998889999999999988877665455422 12  244443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        85 vnnAg   89 (263)
T 2a4k_A           85 AHFAG   89 (263)
T ss_dssp             EEGGG
T ss_pred             EECCC
Confidence            99987

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.88  E-value=5.9e-05  Score=63.52  Aligned_cols=80  Identities=20%  Similarity=0.316  Sum_probs=58.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee---eeCCChhhHHHHHHHhCCCCccEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA---FNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      -.++.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++.....   .|..+.+.+.+.+.+.  +++|++
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence            45788999999999999999998889999999999999887777656654322   2333321222222222  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        89 i~~Ag   93 (249)
T 3f9i_A           89 VCNAG   93 (249)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.86  E-value=0.0002  Score=60.94  Aligned_cols=106  Identities=18%  Similarity=0.139  Sum_probs=68.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----C-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-----D-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-----~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++..     . ..  .|-.+.+++.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            577999999999999999999888999999999998776544324321     1 12  243443233333333221  4


Q ss_pred             CccEEEECCCh---hhH---------------HHHHHhhcc-----CCEEEEEeccccc
Q 037444          221 GIDIYFENVGG---KML---------------DAVLLNMRL-----RGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~~  256 (339)
                      ++|++|++.|.   +.+               ..++..++.     .|++|.+++....
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  144 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  144 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCcccc
Confidence            79999999983   111               223444443     5899988875543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.85  E-value=6.4e-05  Score=63.30  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-e--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-A--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.++++... .  .|-.+.+++.+.+.++..  |++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            57899999999999999999999999999999999988777665666532 1  244443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        85 v~nAg   89 (247)
T 3rwb_A           85 VNNAS   89 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.84  E-value=7.4e-05  Score=62.83  Aligned_cols=80  Identities=11%  Similarity=0.194  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++|... ..|-.+.+++.+.+.+...  +++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999988899999999999888776654556321 2344443233333333222  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        84 ~Ag   86 (245)
T 1uls_A           84 YAG   86 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.84  E-value=7.7e-05  Score=64.45  Aligned_cols=78  Identities=13%  Similarity=0.225  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. ..  .|-.+.+++.+.+.++  +++|++|+
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~   92 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN   92 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence            5789999999999999999998889999999999998887776455432 22  2444431333333333  57999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        93 nAg   95 (291)
T 3rd5_A           93 NAG   95 (291)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.84  E-value=0.00016  Score=62.86  Aligned_cols=81  Identities=15%  Similarity=0.149  Sum_probs=54.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ee--eeCCCh-hhHHHHHHHhCC--
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DA--FNYKEE-PDLDAALKRCFP--  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v--~~~~~~-~~~~~~v~~~~~--  219 (339)
                      ..+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +..  .+  .|-.+. ..+...+..+..  
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35789999999999999999888889999999999988765544343   221  12  233331 122332332221  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus        90 g~iD~lv~nAg  100 (311)
T 3o26_A           90 GKLDILVNNAG  100 (311)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999998

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.84  E-value=0.00021  Score=60.63  Aligned_cols=82  Identities=21%  Similarity=0.271  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      -.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .  ..|-.+.+++.+.+.++..  ++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999888888999999999988766554333   332 1  2344443233333333321  37


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.84  E-value=0.00012  Score=62.68  Aligned_cols=80  Identities=25%  Similarity=0.400  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCC-C--ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGF-D--DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~-~--~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++   .+. .  .+  .|-.+.+++.+.+.++..  +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            467999999999999999998888999999999998776554322   232 1  12  244443233333333221  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus       111 ~iD~vi~~Ag  120 (279)
T 1xg5_A          111 GVDICINNAG  120 (279)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.82  E-value=0.00017  Score=61.99  Aligned_cols=81  Identities=15%  Similarity=0.139  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-ee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF---D-DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~---~-~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+.+++   +.   . ..  .|-.+.+++.+.+.+...  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999988889999999999988765554333   32   1 11  244443233333333322  


Q ss_pred             CCccEEEECCCh
Q 037444          220 QGIDIYFENVGG  231 (339)
Q Consensus       220 g~~d~vid~~g~  231 (339)
                      |++|++|++.|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.82  E-value=0.00023  Score=59.52  Aligned_cols=76  Identities=20%  Similarity=0.240  Sum_probs=55.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      ++.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++....++  |-.+.    +.+.+...  +++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW----EATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH----HHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH----HHHHHHHHHcCCCCEEE
Confidence            5789999999999999999999889999999999988776665344322333  33332    22333322  3799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        82 ~~Ag   85 (244)
T 3d3w_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9987

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.81  E-value=0.00015  Score=62.24  Aligned_cols=104  Identities=20%  Similarity=0.290  Sum_probs=67.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHH----HHHHhCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDL----LKNKFGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~----~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++ .+.    ++ +.|.. ..  .|-.+.+++.+.+.+...  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999988899999999987543 222    23 34542 22  233333233333333221  4


Q ss_pred             CccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEecccc
Q 037444          221 GIDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       221 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ++|++|++.|..           .               .+.++..++..|++|.+++...
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence            799999998731           1               1334455556799999987554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.80  E-value=9.8e-05  Score=62.60  Aligned_cols=80  Identities=23%  Similarity=0.319  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.++++.. ..  .|-.+.+++.+.+.++..  +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4689999999999999999998899999999999999887776566653 22  244443233333333322  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        88 i~~Ag   92 (261)
T 3n74_A           88 VNNAG   92 (261)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.79  E-value=0.00011  Score=62.37  Aligned_cols=81  Identities=17%  Similarity=0.251  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhC--CCCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCF--PQGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.+..  -+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999988889999999999988877666566643 22  24444323333333332  1479999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.79  E-value=7.1e-05  Score=63.07  Aligned_cols=80  Identities=26%  Similarity=0.444  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+.++..   ...|-.+.+++.+.+.++..  |++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999999999988877666455432   12344443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        88 v~nAg   92 (248)
T 3op4_A           88 VNNAG   92 (248)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.78  E-value=7.7e-05  Score=62.30  Aligned_cols=80  Identities=13%  Similarity=0.074  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      +.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. .  ..|-.+.+++.+.+.+...  +++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            568999999999999999988889999999999998877766455432 1  2244443233333333322  4799999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      ++.|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            98873

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.78  E-value=0.00011  Score=63.04  Aligned_cols=80  Identities=15%  Similarity=0.302  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++...   ..|-.+.+++.+.+.+...  +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999988999999999999988777665666532   2344443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus       106 v~nAg  110 (277)
T 4dqx_A          106 VNNAG  110 (277)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99988

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.78  E-value=0.00013  Score=62.11  Aligned_cols=80  Identities=14%  Similarity=0.115  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ++.++||+||+|++|..+++.+.. .|++|++++++.++.+.+.+++   +.. .+  .|-.+.+++.+.+.++..  ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            568999999999999999888777 8999999999987655443233   332 22  233333133333333221  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        83 id~li~~Ag   91 (276)
T 1wma_A           83 LDVLVNNAG   91 (276)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.77  E-value=0.00018  Score=64.68  Aligned_cols=102  Identities=21%  Similarity=0.160  Sum_probs=75.9

Q ss_pred             hHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHH
Q 037444          138 TAYAGLYEVC-SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       138 tA~~~l~~~~-~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      ..+.++.+.. ..-.|.+|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.+  
T Consensus       205 s~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~-v~------~Leeal--  273 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFR-LV------KLNEVI--  273 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHT--
T ss_pred             HHHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCE-ec------cHHHHH--
Confidence            4455554433 3468999999996 99999999999999999999998887665555 56642 21      332222  


Q ss_pred             hCCCCccEEEECCChh-hHH-HHHHhhccCCEEEEEecc
Q 037444          217 CFPQGIDIYFENVGGK-MLD-AVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       217 ~~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~~  253 (339)
                         ...|+++.|.|.. .+. ..++.+++++.++.+|..
T Consensus       274 ---~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          274 ---RQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             ---TTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             ---hcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence               2589999998854 444 789999999999998764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.77  E-value=9.2e-05  Score=62.61  Aligned_cols=80  Identities=19%  Similarity=0.189  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+.++++.. ..  .|-.+.+++.+.+.+...  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999999999999999998889999999999988776665455432 12  244443233333433322  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        84 v~nAg   88 (254)
T 1hdc_A           84 VNNAG   88 (254)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.76  E-value=0.00037  Score=58.84  Aligned_cols=79  Identities=16%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      +.++||+||+|++|.++++.+...|++|+++.+++++.+.+.+++   +.. ..  .|-.+.+++.+.+.+..  -+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999998889999999999987765544233   432 12  24444323333333322  14799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        82 ~lv~nAg   88 (256)
T 1geg_A           82 VIVNNAG   88 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.75  E-value=0.00011  Score=61.80  Aligned_cols=104  Identities=13%  Similarity=0.038  Sum_probs=70.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      .+|||+||++++|.++++.+...|++|+++.+++++.+.+.++.+-..  ..|-.++++..+.+.+...  |++|+++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            689999999999999999999999999999999988777763332212  2244443233333333322  479999998


Q ss_pred             CChh-----------hH---------------HHHHHhh-ccCCEEEEEeccccc
Q 037444          229 VGGK-----------ML---------------DAVLLNM-RLRGRIAVCGMISQY  256 (339)
Q Consensus       229 ~g~~-----------~~---------------~~~~~~l-~~~G~~v~~g~~~~~  256 (339)
                      .|..           .+               +.++..| +.+|++|.+++....
T Consensus        83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~  137 (247)
T 3ged_A           83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAF  137 (247)
T ss_dssp             CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGT
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccc
Confidence            8621           11               2233344 357999999876553

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.75  E-value=0.00029  Score=57.98  Aligned_cols=98  Identities=8%  Similarity=0.100  Sum_probs=65.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHH-HHHHHHHHhCCC-eee--eCCChhhHHHHHHHhCCCCccEEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKE-KVDLLKNKFGFD-DAF--NYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~-~~ga~V~~~~~~~~-~~~~~~~~~g~~-~v~--~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+|||+||+|.+|..+++.+. ..|++|++++++++ +.+.+. ..+.. .++  |..+.    +.+.+... ++|++|+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~----~~~~~~~~-~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNP----GXLEQAVT-NAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCH----HHHHHHHc-CCCEEEE
Confidence            369999999999999988877 89999999999988 665553 22322 223  33332    23333332 6999999


Q ss_pred             CCChhh--HHHHHHhhccC--CEEEEEeccccc
Q 037444          228 NVGGKM--LDAVLLNMRLR--GRIAVCGMISQY  256 (339)
Q Consensus       228 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~~  256 (339)
                      +.|...  ....++.++..  |++|.+++...+
T Consensus        80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~~  112 (221)
T 3r6d_A           80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGLS  112 (221)
T ss_dssp             SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred             cCCCCChhHHHHHHHHHhcCCCeEEEEeeceec
Confidence            998532  34455555543  689988775543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.74  E-value=0.00036  Score=59.55  Aligned_cols=104  Identities=18%  Similarity=0.266  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCCe-e--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKN---KFGFDD-A--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++ .++.+.+.+   +.|... .  .|-.+.+++.+.+.+...  |+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999888899999998654 344443332   334421 2  244443233333433322  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +|++|++.|..           .               .+.++..++++|++|.+++..
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            99999998731           1               233455666789999987643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.74  E-value=0.0001  Score=63.17  Aligned_cols=81  Identities=23%  Similarity=0.377  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.++..  +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999988889999999999988877766566643 22  244443233333333322  479999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.73  E-value=0.00036  Score=58.58  Aligned_cols=80  Identities=10%  Similarity=0.111  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Cee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++..   ..+  .|..+.+++.+.+.++..  +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999998888999999999998876655434432   122  243443133333333221  3699


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        85 ~li~~Ag   91 (251)
T 1zk4_A           85 TLVNNAG   91 (251)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.73  E-value=0.00014  Score=61.55  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---D-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++..   . ..  .|-.+.+++.+.+.++..  +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999889999999999999887766645432   1 12  244443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        85 d~lv~nAg   92 (257)
T 3imf_A           85 DILINNAA   92 (257)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999988

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.72  E-value=9.9e-05  Score=62.24  Aligned_cols=106  Identities=21%  Similarity=0.313  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe---eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD---AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.++   .|...   ..|-.++++..+.+.+...  |++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998889999999999999887655433   34431   2344444233333333322  479


Q ss_pred             cEEEECCCh--h----------hH---------------HHHHHhhcc--CCEEEEEeccccc
Q 037444          223 DIYFENVGG--K----------ML---------------DAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       223 d~vid~~g~--~----------~~---------------~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      |+++++.|.  .          .+               +.++..|.+  +|++|.+++..+.
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~  148 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI  148 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence            999998872  1          11               234444433  6899999876553

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.72  E-value=0.00013  Score=62.73  Aligned_cols=80  Identities=21%  Similarity=0.285  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.++++...   ..|-.+.+++.+.+.++..  +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999988999999999999988777764555431   2244443233333333321  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        84 vnnAg   88 (281)
T 3zv4_A           84 IPNAG   88 (281)
T ss_dssp             ECCCC
T ss_pred             EECCC
Confidence            99987

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.72  E-value=0.0001  Score=57.19  Aligned_cols=92  Identities=20%  Similarity=0.242  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .-.++.+|+|.|+ |.+|..+++.++..|.+|+++.+++++.+.+++..|.. ++..+.. + .+.+.+..-.++|+||.
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVFA   90 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEEE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEEE
Confidence            3457889999996 99999999999999999999999888766553123443 3433322 2 22333321127999999


Q ss_pred             CCChhh-HHHHHHhhcc
Q 037444          228 NVGGKM-LDAVLLNMRL  243 (339)
Q Consensus       228 ~~g~~~-~~~~~~~l~~  243 (339)
                      |++.+. ...+...++.
T Consensus        91 ~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           91 FTNDDSTNFFISMNARY  107 (155)
T ss_dssp             CSSCHHHHHHHHHHHHH
T ss_pred             EeCCcHHHHHHHHHHHH
Confidence            999753 3344444444

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.72  E-value=0.00012  Score=62.67  Aligned_cols=80  Identities=19%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.++..  |++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999999999999999988889999999999998877766566542 22  244443233333333222  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus       107 VnnAg  111 (272)
T 4dyv_A          107 FNNAG  111 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.71  E-value=0.00025  Score=60.22  Aligned_cols=106  Identities=8%  Similarity=0.036  Sum_probs=67.6

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCC--Cee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGA--VGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGF--DDA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~--~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~--~~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .|.++||+||+|.  +|.++++.+...|++|+++.++++..+.+.   ++.+.  ..+  .|-.+.+++.+.+.++..  
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5789999999954  999999888889999999998865433333   13332  122  244443234444443322  


Q ss_pred             CCccEEEECCChh---------------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          220 QGIDIYFENVGGK---------------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       220 g~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +++|+++++.|..               .               .+.++..++++|++|.+++....
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  152 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE  152 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence            3799999988721               1               12234455668999999875543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.71  E-value=9.7e-05  Score=63.11  Aligned_cols=80  Identities=16%  Similarity=0.185  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.+++++.+.+.++++...   ..|-.+.+++.+.+.+...  |++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999988999999999999887766654666431   2344443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        90 v~nAg   94 (271)
T 3tzq_B           90 DNNAA   94 (271)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.70  E-value=0.00015  Score=61.76  Aligned_cols=80  Identities=16%  Similarity=0.316  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .  ..|-.+.+++.+.+.++..  |++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999998899999999999988766654343   332 1  2344443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        83 D~lVnnAG   90 (264)
T 3tfo_A           83 DVLVNNAG   90 (264)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.70  E-value=8e-05  Score=64.01  Aligned_cols=80  Identities=19%  Similarity=0.247  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---C-C-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG---F-D-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g---~-~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++.   . . ..  .|-.+.+++.+.+.++..  |+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999888899999999999887665543331   1 1 22  344443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       112 iD~lvnnAG  120 (281)
T 4dry_A          112 LDLLVNNAG  120 (281)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.69  E-value=0.00021  Score=60.59  Aligned_cols=80  Identities=21%  Similarity=0.304  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhCCC-C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCFPQ-G  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~~g-~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.+++     +.. ..  .|-.+.+.+.+.+.+.... +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999988889999999999987765554333     311 22  3444432333444433322 4


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (260)
T 2z1n_A           86 ADILVYSTG   94 (260)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.68  E-value=0.0002  Score=61.01  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      -.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++    +.. ..  .|-.+.+++.+.+.+...  +
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999998889999999999987765543233    542 12  244443233333333221  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        99 ~iD~lvnnAg  108 (267)
T 1vl8_A           99 KLDTVVNAAG  108 (267)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.68  E-value=0.00043  Score=59.77  Aligned_cols=92  Identities=18%  Similarity=0.231  Sum_probs=71.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|+|+|. |.+|..+++.++.+|++|++..++.++.+.+. ++|+. +++..   ++.+.+     ...|+|+.++
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHh-----cCCCEEEECC
Confidence            47899999995 99999999999999999999999988777776 77764 23221   332222     2599999999


Q ss_pred             Chhh-HHHHHHhhccCCEEEEEec
Q 037444          230 GGKM-LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~~-~~~~~~~l~~~G~~v~~g~  252 (339)
                      .... -...+..+++++.++.++.
T Consensus       222 p~~~i~~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          222 PALVVTANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred             ChHHhCHHHHHhcCCCCEEEEecC
Confidence            8542 2457788999999999875

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.68  E-value=0.00035  Score=59.81  Aligned_cols=102  Identities=18%  Similarity=0.274  Sum_probs=71.6

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC
Q 037444          144 YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       144 ~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      .....+.++++||-.|+ |. |..++.+++..  +.+|+++..+++..+.+++.   .+...-+..... ++.+.   +.
T Consensus       105 ~~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~  178 (277)
T 1o54_A          105 AMMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FD  178 (277)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CS
T ss_pred             HHHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---cc
Confidence            35578899999999985 44 88999999986  46999999999888777633   244111111111 22211   22


Q ss_pred             CCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       179 ~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          179 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            2479999987664  47889999999999998764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.67  E-value=0.0002  Score=60.90  Aligned_cols=80  Identities=16%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++     +.. ..  .|-.+.+++.+.+.+...  +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999988889999999999987765544233     432 22  244443233333333322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        92 ~id~lv~nAg  101 (267)
T 1iy8_A           92 RIDGFFNNAG  101 (267)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.67  E-value=0.00018  Score=60.61  Aligned_cols=80  Identities=14%  Similarity=0.188  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--ee--eeCCChhhHHHHHHHhC-CCCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD--DA--FNYKEEPDLDAALKRCF-PQGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~v~~~~-~g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++..  ..  .|..+.+.+.+.+.+.. .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            5679999999999999999988889999999999988776665455432  22  23343313333332221 1479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        90 i~~Ag   94 (254)
T 2wsb_A           90 VNSAG   94 (254)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.67  E-value=0.00022  Score=59.98  Aligned_cols=80  Identities=24%  Similarity=0.406  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+...  +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4679999999999999999988889999999999988766554333   432 22  244443233333333221  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        86 d~lv~nAg   93 (247)
T 2jah_A           86 DILVNNAG   93 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.67  E-value=8.7e-05  Score=62.63  Aligned_cols=106  Identities=20%  Similarity=0.238  Sum_probs=72.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe---eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD---AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.++   .|...   ..|-.++++..+.+.+...  |++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            688999999999999999999999999999999998876554433   34321   2344444244444444332  479


Q ss_pred             cEEEECCChh-----------h---------------HHHHHHhhc---cCCEEEEEeccccc
Q 037444          223 DIYFENVGGK-----------M---------------LDAVLLNMR---LRGRIAVCGMISQY  256 (339)
Q Consensus       223 d~vid~~g~~-----------~---------------~~~~~~~l~---~~G~~v~~g~~~~~  256 (339)
                      |+++++.|..           .               .+.++..+.   .+|++|.+++....
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~  150 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ  150 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence            9999998731           1               123445552   36899999876554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.67  E-value=0.00022  Score=60.54  Aligned_cols=80  Identities=18%  Similarity=0.272  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++    +.. ..  .|-.+.+++.+.+.+...  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999998889999999999987765544233    432 12  244443233333333221  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (263)
T 3ai3_A           86 ADILVNNAG   94 (263)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.66  E-value=0.00024  Score=59.87  Aligned_cols=81  Identities=16%  Similarity=0.211  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----C-C-Cee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF-----G-F-DDA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~-----g-~-~~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||++++|.++++.+...|++|++++++.++.+.+.+++     + . ..+  .|-.+.+++.+.+.++..  
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999888888999999999988766554333     2 1 122  244443233333333322  


Q ss_pred             CCccEEEECCCh
Q 037444          220 QGIDIYFENVGG  231 (339)
Q Consensus       220 g~~d~vid~~g~  231 (339)
                      +++|++|++.|.
T Consensus        86 g~iD~lvnnAg~   97 (250)
T 3nyw_A           86 GAVDILVNAAAM   97 (250)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999983

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.66  E-value=0.00019  Score=61.40  Aligned_cols=80  Identities=10%  Similarity=0.108  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.++||+||+  |++|.++++.+...|++|++++++.+   ..+.+.+..+...+  .|-.+.+.+.+.+.+..  -++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  99999999988889999999998864   34444423443222  34444323333333322  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        85 id~lv~nAg   93 (275)
T 2pd4_A           85 LDFIVHSVA   93 (275)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.65  E-value=0.00061  Score=56.90  Aligned_cols=76  Identities=14%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      ++.++||+||+|++|..+++.+...|++|++++++.++.+.+.++....+++  |..+.    +.+++...  +++|++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW----DATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH----HHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH----HHHHHHHHHcCCCCEEE
Confidence            5679999999999999999998889999999999988776655333222333  33332    22333322  3699999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        82 ~~Ag   85 (244)
T 1cyd_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9988

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.65  E-value=0.00053  Score=59.28  Aligned_cols=106  Identities=11%  Similarity=0.052  Sum_probs=68.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCeee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGFDDAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|  ++|.++++.+...|++|+++.++++..+.+.   ++.+....+  |-.+.+++.+.+.++..  |+
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999987  9999999988889999999998865433332   234443333  44443233333333322  47


Q ss_pred             ccEEEECCChh---------------hH---------------HHHHHhhccCCEEEEEeccccc
Q 037444          222 IDIYFENVGGK---------------ML---------------DAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       222 ~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +|++|++.|..               .+               +.++..++++|++|.+++....
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~  173 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE  173 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc
Confidence            99999998731               11               2233355568999998875543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.65  E-value=0.00016  Score=61.02  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.+...  +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999988889999999999988777665466542 12  243443233333333221  469999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        85 v~~Ag   89 (253)
T 1hxh_A           85 VNNAG   89 (253)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.65  E-value=0.0002  Score=60.77  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++... ..  .|-.+.+++.+.+.+...  |++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999999999999999988889999999999988776655344321 12  244443233333333222  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        86 v~~Ag   90 (260)
T 1nff_A           86 VNNAG   90 (260)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.64  E-value=0.00036  Score=60.24  Aligned_cols=105  Identities=17%  Similarity=0.196  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++ .+.+.+   +.+.. ..  .|-.+.+++.+.+.++..  ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999988999999999987653 222221   33432 12  244443233333333322  47


Q ss_pred             ccEEEECCChh------------h---------------HHHHHHhhccCCEEEEEecccc
Q 037444          222 IDIYFENVGGK------------M---------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       222 ~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      +|++|++.|..            .               .+.++..++++|++|.+++...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~  186 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA  186 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh
Confidence            99999987621            0               1234445667899998876443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.64  E-value=0.0006  Score=58.85  Aligned_cols=107  Identities=12%  Similarity=0.053  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCee--eeCCChhhHHHHHHHhC--CC
Q 037444          150 KKGEYVYVSAASGA--VGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGFDDA--FNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~--~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~~~v--~~~~~~~~~~~~v~~~~--~g  220 (339)
                      -.|.++||+||+|+  +|.++++.+...|++|+++.++++..+.++   ++.+....  .|-.+.+++.+.+.++.  -+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999965  999999998899999999998865433332   13343222  24444323333333332  14


Q ss_pred             CccEEEECCChh---------------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          221 GIDIYFENVGGK---------------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      ++|++|++.|..               .               .+.++..++++|++|.+++....
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~  174 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAE  174 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGT
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhc
Confidence            799999998731               0               12344556678999998875543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.64  E-value=0.00024  Score=60.62  Aligned_cols=80  Identities=16%  Similarity=0.168  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+.+++.....  .|-.+.+++.+.+.+...  +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999889999999999998877766534432222  243443233333333221  4799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        88 ~nAg   91 (270)
T 1yde_A           88 NNAG   91 (270)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.64  E-value=0.00014  Score=60.66  Aligned_cols=99  Identities=19%  Similarity=0.178  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|||+||+|.+|..+++.+...|++|+++++++++.+.+. ..+..+++..+    +.+.+.+.. +++|+||++.|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~D----l~~~~~~~~-~~~D~vi~~ag   93 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVAN----LEEDFSHAF-ASIDAVVFAAG   93 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEECC----TTSCCGGGG-TTCSEEEECCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEcc----cHHHHHHHH-cCCCEEEECCC
Confidence            4789999999999999999998889999999999998887776 55652333222    112233332 27999999998


Q ss_pred             hh---h-----------HHHHHHhhcc--CCEEEEEecccc
Q 037444          231 GK---M-----------LDAVLLNMRL--RGRIAVCGMISQ  255 (339)
Q Consensus       231 ~~---~-----------~~~~~~~l~~--~G~~v~~g~~~~  255 (339)
                      ..   .           ....++.++.  .+++|.+++...
T Consensus        94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            32   1           1223333333  378998877543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.64  E-value=0.00025  Score=60.77  Aligned_cols=80  Identities=19%  Similarity=0.322  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+.+++   +.. ..  .|-.+.+++.+.+.+..  -+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999998889999999999987765443233   432 12  24444323333333322  1479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       101 D~lv~~Ag  108 (277)
T 2rhc_B          101 DVLVNNAG  108 (277)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.64  E-value=0.00039  Score=59.28  Aligned_cols=104  Identities=17%  Similarity=0.242  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++ .+..+.+.+   ..+.. ..  .|-.+.+++.+.+.+...  ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999988999999997654 444433332   33432 12  244443233333433322  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +|++|++.|..           .               .+.++..++++|++|.+++..
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence            99999988731           1               234556677789999998754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.64  E-value=0.00055  Score=58.79  Aligned_cols=104  Identities=13%  Similarity=0.143  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC-e--eeeCCChhhHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------------KEKVDLLKN---KFGFD-D--AFNYKEEPDLDA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------------~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~  212 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++            .++.+.+.+   ..+.. .  ..|-.+.+++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            57899999999999999999999999999999876            444443321   33432 1  224444323333


Q ss_pred             HHHHhCC--CCccEEEECCChh---------hH---------------HHHHHhhccCCEEEEEeccc
Q 037444          213 ALKRCFP--QGIDIYFENVGGK---------ML---------------DAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       213 ~v~~~~~--g~~d~vid~~g~~---------~~---------------~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.++..  +++|++|++.|..         .+               +.++..+..+|++|.+++..
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            3333322  4799999998731         11               22344556689999887643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.64  E-value=4e-05  Score=64.01  Aligned_cols=104  Identities=14%  Similarity=0.167  Sum_probs=69.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      =.|.++||+||++++|.++++.+...|++|+++.++.++.+... .-.+ ....|-.+++++.+.+.++  |++|+++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDiLVNN   85 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEAL--PRLDVLVNN   85 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHC--SCCSEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhc--CCCCEEEEC
Confidence            36899999999999999999999999999999998876544222 1111 1223444442333333332  579999999


Q ss_pred             CCh--h-------hH---------------HHHHHhhc-cCCEEEEEeccccc
Q 037444          229 VGG--K-------ML---------------DAVLLNMR-LRGRIAVCGMISQY  256 (339)
Q Consensus       229 ~g~--~-------~~---------------~~~~~~l~-~~G~~v~~g~~~~~  256 (339)
                      .|.  +       .+               +.++.+|+ .+|++|.+++....
T Consensus        86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~  138 (242)
T 4b79_A           86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST  138 (242)
T ss_dssp             CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc
Confidence            872  1       11               23445554 47999999876553

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.64  E-value=0.00024  Score=61.61  Aligned_cols=81  Identities=20%  Similarity=0.315  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      -.|.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. .  ..|-.+.+++.+.+.++..  ++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            36789999999999999999998899999999999988776654333   332 1  2344443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       109 id~lvnnAg  117 (301)
T 3tjr_A          109 VDVVFSNAG  117 (301)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.63  E-value=0.0003  Score=60.12  Aligned_cols=80  Identities=18%  Similarity=0.298  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHH---HHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAAL---KRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v---~~~~~g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.+++   +.. .  ..|-.+.+++.+.+   .+..+++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998889999999999987765543232   432 1  22444431333323   3333357


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       100 id~lv~nAg  108 (273)
T 1ae1_A          100 LNILVNNAG  108 (273)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.63  E-value=0.00027  Score=59.58  Aligned_cols=81  Identities=16%  Similarity=0.188  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----C-CCe--eeeC--CChhhHHHHHHHhC--
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----G-FDD--AFNY--KEEPDLDAALKRCF--  218 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g-~~~--v~~~--~~~~~~~~~v~~~~--  218 (339)
                      -.|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++    + ...  ..|.  .+.+++.+.+.++.  
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            35789999999999999999988889999999999988765554332    2 111  2233  33213333333322  


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      .+++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (252)
T 3f1l_A           90 YPRLDGVLHNAG  101 (252)
T ss_dssp             CSCCSEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence            247999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.63  E-value=0.00035  Score=59.92  Aligned_cols=78  Identities=21%  Similarity=0.176  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC-CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP-QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~-g~~d~vi  226 (339)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.++++.. .+  .|-.+.+++.+.+.++.. +++|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            5789999999999999999888889999999999998887776577653 22  344444244444544422 3799999


Q ss_pred             EC
Q 037444          227 EN  228 (339)
Q Consensus       227 d~  228 (339)
                      .+
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            88

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.63  E-value=0.00017  Score=61.31  Aligned_cols=80  Identities=23%  Similarity=0.316  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +..  ..  .|-.+.+++.+.+.+...  ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999998899999999999988766554333   211  12  244443233333333222  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        89 id~lvnnAg   97 (262)
T 3pk0_A           89 IDVVCANAG   97 (262)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.63  E-value=0.00053  Score=57.02  Aligned_cols=79  Identities=14%  Similarity=0.280  Sum_probs=53.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++    +.. .+  .|-.+.+++.+.+.++..  +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999988765554332    332 22  233333122222221111  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        82 d~li~~Ag   89 (235)
T 3l77_A           82 DVVVANAG   89 (235)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.63  E-value=0.00024  Score=60.93  Aligned_cols=81  Identities=21%  Similarity=0.338  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      ..+.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++   +.. .  ..|-.+.+++.+.+.++..  |+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999888889999999999988766554343   332 1  2244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       102 id~lv~nAg  110 (279)
T 3sju_A          102 IGILVNSAG  110 (279)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCC
Confidence            999999987

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.63  E-value=0.00027  Score=59.87  Aligned_cols=80  Identities=19%  Similarity=0.188  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++. ++.+..+.+.+   +.+.. ..  .|-.+.+++.+.+.++..  |+
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999998888999999984 44444333322   23432 22  244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        87 id~lv~nAg   95 (259)
T 3edm_A           87 IHGLVHVAG   95 (259)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.62  E-value=0.00028  Score=59.77  Aligned_cols=80  Identities=16%  Similarity=0.289  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHH---HhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALK---RCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~---~~~~g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+.+++   +.. ..  .|-.+.+++.+.+.   +...++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988889999999999987765543233   332 12  24444313333333   233257


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        88 id~lv~~Ag   96 (260)
T 2ae2_A           88 LNILVNNAG   96 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.0001  Score=62.40  Aligned_cols=80  Identities=20%  Similarity=0.174  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.+...  |++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999998899999999999887766555355532 22  244443233333333322  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        86 v~nAg   90 (257)
T 3tpc_A           86 VNCAG   90 (257)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.62  E-value=0.00028  Score=59.42  Aligned_cols=81  Identities=19%  Similarity=0.233  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.++..  +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999998899999999999988776654333   331 12  243443233333333221  379


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |++|++.|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.61  E-value=0.00025  Score=60.15  Aligned_cols=80  Identities=19%  Similarity=0.255  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++... ..  .|-.+.+++.+.+.+...  |++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999998889999999999988776665344321 12  344443233333333221  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.61  E-value=0.00053  Score=61.79  Aligned_cols=101  Identities=21%  Similarity=0.132  Sum_probs=74.5

Q ss_pred             HHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.++.+. ...-.|.+|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +.      ++.+.++  
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~--  301 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS--  301 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG--
T ss_pred             HHHHHHHhcCCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh--
Confidence            44444333 33568999999995 99999999999999999999988877655454 55653 22      3333222  


Q ss_pred             CCCCccEEEECCChh-hH-HHHHHhhccCCEEEEEecc
Q 037444          218 FPQGIDIYFENVGGK-ML-DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       218 ~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (339)
                         ..|+|+.+.|.. .+ ...+..+++++.++.+|..
T Consensus       302 ---~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          302 ---TADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             ---GCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             ---hCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence               489999999865 33 5888999999999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.61  E-value=0.00029  Score=59.31  Aligned_cols=77  Identities=21%  Similarity=0.341  Sum_probs=56.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      ++||+||+|++|.++++.+...|++|+++.++.++.+.+.++++.. ..  .|-.+.+++.+.+.+...  +++|++|++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6899999999999999988889999999999988877666466532 22  344443234444444433  379999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        82 Ag   83 (248)
T 3asu_A           82 AG   83 (248)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.61  E-value=0.00029  Score=60.58  Aligned_cols=80  Identities=15%  Similarity=0.194  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG---FD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g---~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      ++.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++.   .. ..  .|-.+.+++.+.+.++..  |++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999888899999999999888766654542   22 12  244443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       107 D~lVnnAg  114 (283)
T 3v8b_A          107 DIVVANAG  114 (283)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.61  E-value=0.00019  Score=60.63  Aligned_cols=78  Identities=21%  Similarity=0.239  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHH---HHHHHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLD---AALKRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~---~~v~~~~~g~  221 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++   |.. .+  .|-.+.+++.   +.+.+.  ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence            5789999999999999999998899999999999987765554333   432 12  2444431333   333333  57


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        84 id~lv~nAg   92 (252)
T 3h7a_A           84 LEVTIFNVG   92 (252)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEECCC
Confidence            999999988

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.60  E-value=0.00033  Score=58.79  Aligned_cols=80  Identities=25%  Similarity=0.367  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+.+   +.. ..  .|-.+.+++.+.+.++.  .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999888889999999999988766554333   432 12  34444323334344332  2379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        84 d~li~~Ag   91 (247)
T 3lyl_A           84 DILVNNAG   91 (247)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.60  E-value=0.00018  Score=61.01  Aligned_cols=80  Identities=16%  Similarity=0.136  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.++++.. .+  .|..+.+++.+.+.++..  +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4689999999999999999998889999999999877666555466543 22  244443233333333221  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        91 i~~Ag   95 (265)
T 2o23_A           91 VNCAG   95 (265)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99887

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.60  E-value=0.00026  Score=60.35  Aligned_cols=80  Identities=14%  Similarity=0.258  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHhCCC-ee--eeCCChhhHHHHHHHh---CC--
Q 037444          151 KGEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKNKFGFD-DA--FNYKEEPDLDAALKRC---FP--  219 (339)
Q Consensus       151 ~g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~---~~--  219 (339)
                      .+.++||+||  +|++|.++++.+...|++|+++.++.++ .+.+.++++.. ..  .|-.+.+++.+.+.++   .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4688999998  8999999999888899999999988765 35554345432 12  3444432333333322   22  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus        86 ~~iD~lv~nAg   96 (269)
T 2h7i_A           86 NKLDGVVHSIG   96 (269)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCceEEEECCc
Confidence            17999999887

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.59  E-value=0.00041  Score=61.45  Aligned_cols=79  Identities=23%  Similarity=0.379  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCC-e--eeeCCChhhHHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------VDLLKNKFGFD-D--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-----------~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~  216 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++           .+.++ ..|.. .  ..|-.+.+++.+.+.+
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence            57899999999999999999888899999999988652           23333 44542 1  2344444233333333


Q ss_pred             hCC--CCccEEEECCC
Q 037444          217 CFP--QGIDIYFENVG  230 (339)
Q Consensus       217 ~~~--g~~d~vid~~g  230 (339)
                      +..  +++|++|++.|
T Consensus       123 ~~~~~g~iDilVnnAG  138 (346)
T 3kvo_A          123 AIKKFGGIDILVNNAS  138 (346)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  47999999988

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.59  E-value=0.00043  Score=63.32  Aligned_cols=101  Identities=19%  Similarity=0.205  Sum_probs=73.4

Q ss_pred             HHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEVCSP-KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~~~~-~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.++.+..+. -.|.+++|+|+ |++|.++++.++..|++|+++.+++.+...+. ..|++ +.+..   +       .
T Consensus       251 l~dgi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e-------~  317 (488)
T 3ond_A          251 LPDGLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---D-------V  317 (488)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---G-------T
T ss_pred             HHHHHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---H-------H
Confidence            33444443333 47999999997 79999999999999999999999888777666 56652 22111   1       1


Q ss_pred             CCCCccEEEECCChh-hH-HHHHHhhccCCEEEEEecc
Q 037444          218 FPQGIDIYFENVGGK-ML-DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       218 ~~g~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (339)
                       ...+|+++++.|.. .+ ...++.+++++.++.+|..
T Consensus       318 -~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          318 -VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             -TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             -HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence             12689999999963 33 3588899999999888753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.59  E-value=0.00021  Score=61.18  Aligned_cols=80  Identities=21%  Similarity=0.282  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.++||+||+|++|.++++.+...|++|++++++.++.+.+.++   .+.. ..  .|-.+.+++.+.+.++..  +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998888999999999988765554433   2322 22  244443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       111 D~lvnnAg  118 (276)
T 3r1i_A          111 DIAVCNAG  118 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.59  E-value=0.00034  Score=58.05  Aligned_cols=76  Identities=13%  Similarity=0.120  Sum_probs=54.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++||+||+|++|.++++.+...|++|+++++++++.+.+.++++.. .  ..|-.+. +-.+.+.+.....+|+++++.|
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSCSSCCSEEEECCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHHhhcCCEEEEeCC
Confidence            6899999999999999998899999999999999887776455432 1  2344443 2222222222334599999987

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.58  E-value=0.00015  Score=59.92  Aligned_cols=90  Identities=9%  Similarity=0.071  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.+              .|-.+.+.+.+.+.++  +++|+++++.|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            4678999999999999999988888999999987643              2233331333444444  57899999887


Q ss_pred             hh---------------------------hHHHHHHhhccCCEEEEEeccccc
Q 037444          231 GK---------------------------MLDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       231 ~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      ..                           ..+.++..++++|+++.+++....
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~  121 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR  121 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc
Confidence            21                           012233455668899998875543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.58  E-value=0.00034  Score=59.34  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   |.. .+  .|-.+.+++.+.+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999987766554333   332 12  244443233333333222  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        86 d~lv~nAg   93 (262)
T 1zem_A           86 DFLFNNAG   93 (262)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999886

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.58  E-value=0.00022  Score=62.52  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--C-e--eeeCCChhhHHHHHHHhC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF--D-D--AFNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~--~-~--v~~~~~~~~~~~~v~~~~--~g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+.+   +.  . .  ..|-.+.+.+.+.+.++.  -+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4679999999999999999988889999999999988766554332   32  1 1  234444323333333332  14


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        87 ~id~lv~nAg   96 (319)
T 3ioy_A           87 PVSILCNNAG   96 (319)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.58  E-value=0.00018  Score=62.15  Aligned_cols=80  Identities=16%  Similarity=0.266  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Ce--e--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DD--A--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~--v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++..   ..  .  .|-.+.+++.+.+.++..  ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999989999999999998776655534432   11  2  244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       120 iD~lvnnAg  128 (293)
T 3rih_A          120 LDVVCANAG  128 (293)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.57  E-value=0.00017  Score=61.84  Aligned_cols=80  Identities=23%  Similarity=0.344  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. ..  .|-.+.+.+.+.+.++..  +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999999999999999998899999999999988776665455432 22  244443233333333322  379999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        84 v~~Ag   88 (281)
T 3m1a_A           84 VNNAG   88 (281)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.57  E-value=0.00027  Score=60.30  Aligned_cols=80  Identities=18%  Similarity=0.350  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.+.   .+.. .  ..|-.+.+++.+.+.++..  +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999998888999999999998876554422   3332 2  2344443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       107 D~lvnnAg  114 (270)
T 3ftp_A          107 NVLVNNAG  114 (270)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.57  E-value=0.0003  Score=59.81  Aligned_cols=82  Identities=13%  Similarity=0.192  Sum_probs=57.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      -.|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.++..  ++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999988889999999999988766554333   332 12  244443233333333321  47


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999998863

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.56  E-value=0.00022  Score=61.17  Aligned_cols=80  Identities=23%  Similarity=0.303  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG---FD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g---~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.++||+||++++|.++++.+...|++|++++++.++.+.+.+++.   .. ..  .|-.+.+++...+.++..  +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999988899999999999888766654542   21 11  244443133333333221  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        87 D~lvnnAg   94 (280)
T 3tox_A           87 DTAFNNAG   94 (280)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.56  E-value=0.00038  Score=57.83  Aligned_cols=79  Identities=18%  Similarity=0.177  Sum_probs=55.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      +.++||+||+|++|..+++.+...|++|+++.++.++.+.+.++++....  .|-.+.+++.+.+.+...  +++|++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            56899999999999999998888999999999998877666534432222  244443233333333221  37999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        85 ~Ag   87 (234)
T 2ehd_A           85 NAG   87 (234)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.56  E-value=0.00034  Score=59.87  Aligned_cols=80  Identities=23%  Similarity=0.238  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ee--eeCCChhhHHHHHHHhC--CCCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D-DA--FNYKEEPDLDAALKRCF--PQGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~-~v--~~~~~~~~~~~~v~~~~--~g~~d  223 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++..  . .+  .|-.+.+++.+.+.+..  -+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            478999999999999999999888999999999998876655434432  1 11  23333323333333322  14799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus       108 ~lvnnAg  114 (276)
T 2b4q_A          108 ILVNNAG  114 (276)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.56  E-value=0.00032  Score=60.04  Aligned_cols=81  Identities=17%  Similarity=0.290  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      -.|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++    +.. ..  .|-.+.+++.+.+.++..  +
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999998889999999999987654443233    432 12  244443233333333322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.55  E-value=0.0002  Score=60.60  Aligned_cols=80  Identities=20%  Similarity=0.262  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+...  +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999888888999999999988766554333   432 12  244443233333333322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        91 d~lv~nAg   98 (256)
T 3gaf_A           91 TVLVNNAG   98 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.55  E-value=0.00016  Score=61.64  Aligned_cols=80  Identities=23%  Similarity=0.368  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK----FGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.++    .+.. .  ..|-.+.+++.+.+.++..  ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999998876554433    3432 1  2244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        99 id~lv~nAg  107 (266)
T 4egf_A           99 LDVLVNNAG  107 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CCEEEECCC
Confidence            999999887

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.55  E-value=0.00016  Score=61.41  Aligned_cols=79  Identities=15%  Similarity=0.076  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCe-eeeCCChhhHHHHHHHhC--CCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGFDD-AFNYKEEPDLDAALKRCF--PQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~--~g~~d~vi  226 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++. +.++ +.+... ..|-.+.+++.+.+.++.  -+++|++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            467899999999999999998888999999999887653 3344 566432 234444323333333332  14799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.55  E-value=0.00032  Score=58.86  Aligned_cols=80  Identities=24%  Similarity=0.336  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+ ++++.+.+.+++   +.. ..  .|-.+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999998889999999998 766655443232   432 12  244443233333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        83 id~lv~nAg   91 (246)
T 2uvd_A           83 VDILVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.54  E-value=0.0011  Score=57.31  Aligned_cols=106  Identities=15%  Similarity=0.142  Sum_probs=67.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHH---HhCCCe-e--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKN---KFGFDD-A--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.  ++.+.+.+   +.|... .  .|-.+.+++.+.+.++..  +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999889999999988762  23333221   344321 1  233333133333333222  4


Q ss_pred             CccEEEECCChh------------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          221 GIDIYFENVGGK------------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      ++|++|++.|..            .               .+.++..++++|++|.+++....
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~  190 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY  190 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc
Confidence            799999988731            0               12234456678999999876554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.54  E-value=0.00041  Score=59.18  Aligned_cols=80  Identities=19%  Similarity=0.217  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +.. .+  .|-.+.+++.+.+.++.  -+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999998889999999999987765544233   432 22  24444323333333322  1479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       110 D~li~~Ag  117 (272)
T 1yb1_A          110 SILVNNAG  117 (272)
T ss_dssp             SEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.54  E-value=0.00047  Score=59.80  Aligned_cols=93  Identities=22%  Similarity=0.281  Sum_probs=71.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      --.|.+|+|+|+ |.+|..+++.++.+|++|++..++.++.+.+. ++|.. +++.  . ++.+    .. .+.|+|+.+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~--~-~l~~----~l-~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHT--D-ELKE----HV-KDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEG--G-GHHH----HS-TTCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEch--h-hHHH----Hh-hCCCEEEEC
Confidence            347899999996 99999999999999999999999988777676 67753 3322  1 3322    22 259999999


Q ss_pred             CChhhH-HHHHHhhccCCEEEEEec
Q 037444          229 VGGKML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       229 ~g~~~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ++...+ ...++.+++++.++.++.
T Consensus       223 ~p~~~i~~~~~~~mk~g~~lin~a~  247 (300)
T 2rir_A          223 IPSMILNQTVLSSMTPKTLILDLAS  247 (300)
T ss_dssp             CSSCCBCHHHHTTSCTTCEEEECSS
T ss_pred             CChhhhCHHHHHhCCCCCEEEEEeC
Confidence            986422 356788999999999876

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.54  E-value=0.00036  Score=58.68  Aligned_cols=79  Identities=14%  Similarity=0.249  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHH-HHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVD-LLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~-~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++ ++.+ .++ +.+.. ..  .|-.+.+++.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999888999999999887 5544 343 55542 12  244443233333333221  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        85 ~lv~nAg   91 (249)
T 2ew8_A           85 ILVNNAG   91 (249)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.54  E-value=0.0003  Score=59.81  Aligned_cols=80  Identities=18%  Similarity=0.140  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC--ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD--DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~--~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++    +..  ..  .|-.+.+++.+.+.++..  +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999998889999999999988765554332    222  12  244443233333333322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        87 ~id~lvnnAg   96 (265)
T 3lf2_A           87 CASILVNNAG   96 (265)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.53  E-value=0.00081  Score=55.08  Aligned_cols=91  Identities=16%  Similarity=0.163  Sum_probs=63.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+.  .+. .++  |..+. +.    ..+  +++|+||++.|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~-~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDI-NILQKDIFDL-TL----SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSS-EEEECCGGGC-CH----HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCC-eEEeccccCh-hh----hhh--cCCCEEEECCcC
Confidence            6999999999999999999999999999999987765442  222 223  32222 22    222  369999999984


Q ss_pred             h---------hHHHHHHhhccC--CEEEEEeccc
Q 037444          232 K---------MLDAVLLNMRLR--GRIAVCGMIS  254 (339)
Q Consensus       232 ~---------~~~~~~~~l~~~--G~~v~~g~~~  254 (339)
                      .         .....++.++..  ++++.+++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence            2         224555666653  6888887643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.52  E-value=0.00028  Score=60.13  Aligned_cols=104  Identities=17%  Similarity=0.203  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||++++|.++++.+...|++|+++. ++.+..+.+.+   ..+.. .  ..|-.+.+++.+.+.++..  ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999988888899999874 44444443332   33432 1  2244443233333333322  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEeccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +|++|++.|..           .               .+.++..++.+|++|.+++..
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~  164 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ  164 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence            99999998721           1               223445566789999887643

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.52  E-value=0.00045  Score=58.31  Aligned_cols=80  Identities=14%  Similarity=0.197  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.++..  +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988889999999999987655443232   432 22  243443233333333221  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.52  E-value=0.00074  Score=55.52  Aligned_cols=92  Identities=11%  Similarity=-0.036  Sum_probs=62.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+. ..+...+ .|..+. +.    ..+  +++|+||++.|..
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~   73 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE----ADL--DSVDAVVDALSVP   73 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH----HHH--TTCSEEEECCCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH----hhc--ccCCEEEECCccC
Confidence            6999999999999999999888999999999988766554 3333221 233322 22    222  3699999999751


Q ss_pred             -----------hHHHHHHhhcc-CCEEEEEecc
Q 037444          233 -----------MLDAVLLNMRL-RGRIAVCGMI  253 (339)
Q Consensus       233 -----------~~~~~~~~l~~-~G~~v~~g~~  253 (339)
                                 .....++.++. ++++|.+++.
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                       22344455544 4788888654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.52  E-value=0.00059  Score=57.72  Aligned_cols=80  Identities=15%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC---CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF---PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~---~g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+..   .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999998889999999999987765544333   432 12  24444323333344331   357


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            999999994

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.52  E-value=0.00025  Score=60.84  Aligned_cols=80  Identities=18%  Similarity=0.315  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-ee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF---D-DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~---~-~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.   . ..  .|-.+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999988889999999999988766554333   22   1 12  244443233333333221  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus        85 g~iD~lv~nAg   95 (280)
T 1xkq_A           85 GKIDVLVNNAG   95 (280)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.52  E-value=0.00036  Score=58.81  Aligned_cols=100  Identities=14%  Similarity=0.150  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      -+.++||+||+|++|.++++.+...|++|++++++.++.+.      ....++..+.+++.+.+.++..  +++|++|++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            36789999999999999999998999999999988654221      1112233333244444444433  379999999


Q ss_pred             CCh--------h----h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          229 VGG--------K----M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       229 ~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      .|.        +    .               .+.++..++++|++|.+++....
T Consensus        95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (251)
T 3orf_A           95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL  149 (251)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc
Confidence            872        0    1               12344455667899998875543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.52  E-value=0.00039  Score=59.45  Aligned_cols=81  Identities=15%  Similarity=0.299  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-ee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF---D-DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~---~-~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   ..   . ..  .|-.+.+++.+.+.+...  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999888889999999999988776655344   21   1 12  244443233333333221  


Q ss_pred             CCccEEEECCCh
Q 037444          220 QGIDIYFENVGG  231 (339)
Q Consensus       220 g~~d~vid~~g~  231 (339)
                      |++|++|++.|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.51  E-value=0.00036  Score=59.09  Aligned_cols=80  Identities=15%  Similarity=0.242  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-HHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-VDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++ .+.+.+++    +.. ..  .|-.+.+++.+.+.+...  +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999988899999999988766 54443233    432 12  244443233333333222  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        83 ~iD~lv~~Ag   92 (260)
T 1x1t_A           83 RIDILVNNAG   92 (260)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.51  E-value=0.0017  Score=51.68  Aligned_cols=93  Identities=13%  Similarity=0.102  Sum_probs=64.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeee-eCCChhhHHHHHHHhCC-CCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAF-NYKEEPDLDAALKRCFP-QGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~v~~~~~-g~~d~vid~  228 (339)
                      +++|+|.|. |.+|..+++.++.. |.+|+++.+++++.+.++ +.|...+. |..+.    +.+.+.++ .++|+||.+
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~----~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP----DFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH----HHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH----HHHHhccCCCCCCEEEEe
Confidence            678999995 99999999999998 999999999999988888 77875332 33322    23344312 379999999


Q ss_pred             CChh-hHHHHH---HhhccCCEEEEE
Q 037444          229 VGGK-MLDAVL---LNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~-~~~~~~---~~l~~~G~~v~~  250 (339)
                      +++. ......   +.+.+..+++..
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          113 MPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9964 222333   333444566543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.51  E-value=0.00055  Score=58.41  Aligned_cols=80  Identities=18%  Similarity=0.289  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.++++.  . .+  .|-.+.+++.+.+.++..  +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            567999999999999999998888999999999988776555435543  1 12  243443233333333221  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        95 ~li~~Ag  101 (278)
T 2bgk_A           95 IMFGNVG  101 (278)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999887

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.50  E-value=0.00032  Score=58.83  Aligned_cols=77  Identities=18%  Similarity=0.054  Sum_probs=54.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-e--CCHHHHHHHHHHh-CCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-A--GSKEKVDLLKNKF-GFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~--~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      +.++||+||+|++|.++++.+...|++|+++ .  ++.++.+.+.+++ +. .+.+......+.+.+.+.. +++|++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~   78 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS   78 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            4689999999999999999988899999999 5  8888777665455 32 2333332213333333322 37999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        79 ~Ag   81 (244)
T 1zmo_A           79 NDY   81 (244)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.50  E-value=0.00027  Score=61.19  Aligned_cols=80  Identities=20%  Similarity=0.360  Sum_probs=55.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC---C-ee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF---D-DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~---~-~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +.   . .+  .|-.+.+++.+.+.+...  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999988889999999999988765544233   32   1 12  244443233333333221  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus       105 g~iD~lvnnAG  115 (297)
T 1xhl_A          105 GKIDILVNNAG  115 (297)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999887

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.50  E-value=0.00042  Score=58.66  Aligned_cols=80  Identities=20%  Similarity=0.303  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+...  +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999988889999999999987665443232   332 11  233333233333333221  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        93 D~lv~~Ag  100 (260)
T 2zat_A           93 DILVSNAA  100 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.50  E-value=0.00032  Score=59.30  Aligned_cols=78  Identities=17%  Similarity=0.209  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++ +.+.++++. ..+  |-.+.+++.+.+.+...  +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46789999999999999999888899999999998777 444335542 333  33333233333333221  4799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        83 ~~Ag   86 (256)
T 2d1y_A           83 NNAA   86 (256)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.49  E-value=0.00026  Score=60.40  Aligned_cols=80  Identities=24%  Similarity=0.382  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++   |.. ..  .|-.+.+++.+.+.++.  .+++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999998899999999999988765554333   432 11  24444323333333322  2479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       105 D~lv~nAg  112 (271)
T 4ibo_A          105 DILVNNAG  112 (271)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.49  E-value=0.00032  Score=59.24  Aligned_cols=75  Identities=15%  Similarity=0.030  Sum_probs=51.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH--HhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN--KFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~--~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .++||+||+|++|.++++.+...|++|++++++.++.+.+.+  ..+.. ..+  +.. ++.+.+.+...  +++|++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~-~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQ-EPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCC-SHHHHHHHHHHHHSCCCEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHH-HHHHHHHHHHHHhCCCCEEEE
Confidence            369999999999999999998999999999988766554431  23443 222  222 44433333221  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        79 nAg   81 (254)
T 1zmt_A           79 NDI   81 (254)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            887

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.49  E-value=0.00073  Score=56.42  Aligned_cols=79  Identities=25%  Similarity=0.353  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      |.++||+||+|++|..+++.+...|++|+++ .++.++.+.+.++   .+.. ..  .|-.+.+++.+.+.+..  -+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999988999999995 7777665544322   2432 12  24444323333333322  1379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        81 d~li~~Ag   88 (244)
T 1edo_A           81 DVVVNNAG   88 (244)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.49  E-value=0.00072  Score=57.37  Aligned_cols=80  Identities=14%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK---EKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~---~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+  |++|.++++.+...|++|+++++++   +..+.+.+..+...++  |-.+.+++.+.+.+...  ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  9999999998888999999999876   3344444233432333  44443234444444433  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        88 iD~lv~~Ag   96 (265)
T 1qsg_A           88 FDGFVHSIG   96 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.49  E-value=0.00042  Score=58.12  Aligned_cols=79  Identities=20%  Similarity=0.188  Sum_probs=54.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++    +.. .+  .|-.+.+++.+.+.+...  +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568999999999999999988889999999999988776655344    221 12  233433233333333221  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        82 d~li~~Ag   89 (250)
T 2cfc_A           82 DVLVNNAG   89 (250)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.48  E-value=0.00073  Score=57.00  Aligned_cols=79  Identities=19%  Similarity=0.300  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++  .+.++ ..+.. ..  .|-.+.+++.+.+.+...  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999888899999999887651  12222 23432 12  243433233333333221  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|++.|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.48  E-value=0.00016  Score=61.58  Aligned_cols=79  Identities=18%  Similarity=0.188  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+. ..... ...|-.+.+++.+.+.+...  |++|++|+
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4678999999999999999998899999999999877655332 11111 12344443233333333322  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        94 nAg   96 (266)
T 3p19_A           94 NAG   96 (266)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.48  E-value=0.00045  Score=58.60  Aligned_cols=80  Identities=19%  Similarity=0.325  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHH---hCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKR---CFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~---~~~g~  221 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+   ...++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999998889999999999987665443232   332 12  233332123332322   22257


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (266)
T 1xq1_A           93 LDILINNLG  101 (266)
T ss_dssp             CSEEEEECC
T ss_pred             CcEEEECCC
Confidence            999999887

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.48  E-value=0.00039  Score=59.37  Aligned_cols=80  Identities=11%  Similarity=0.087  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCC-eee--eCCCh----hhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKF----GFD-DAF--NYKEE----PDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~----g~~-~v~--~~~~~----~~~~~~v~~~~  218 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++ ++++.+.+.+++    +.. ..+  |-.+.    +.+.+.+.+..
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999988889999999999 877665554333    432 122  33322    13333333322


Q ss_pred             C--CCccEEEECCC
Q 037444          219 P--QGIDIYFENVG  230 (339)
Q Consensus       219 ~--g~~d~vid~~g  230 (339)
                      .  +++|++|++.|
T Consensus        90 ~~~g~id~lv~nAg  103 (276)
T 1mxh_A           90 RAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  47999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.47  E-value=0.00064  Score=56.96  Aligned_cols=81  Identities=16%  Similarity=0.179  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Ceee--eC--CChhhHHHHHHHhCC-
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF--DDAF--NY--KEEPDLDAALKRCFP-  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~--~~v~--~~--~~~~~~~~~v~~~~~-  219 (339)
                      -.|.+++|+||+|++|.++++.+...|++|++++++.++.+.+.+++   +.  ..++  +.  .+.+++.+.+.++.. 
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            35789999999999999999998899999999999988766554332   31  1222  22  222133333333221 


Q ss_pred             -CCccEEEECCC
Q 037444          220 -QGIDIYFENVG  230 (339)
Q Consensus       220 -g~~d~vid~~g  230 (339)
                       +++|++|++.|
T Consensus        92 ~g~id~lv~nAg  103 (247)
T 3i1j_A           92 FGRLDGLLHNAS  103 (247)
T ss_dssp             HSCCSEEEECCC
T ss_pred             CCCCCEEEECCc
Confidence             37999999887

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.47  E-value=0.00036  Score=59.36  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---C--CC-ee--eeCCChhhHHHHHHHhCCCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---G--FD-DA--FNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g--~~-~v--~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++   +  .. ..  .|..+. +..+.+.+.. +++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~-g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEKY-PKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHHC-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHhc-CCC
Confidence            5789999999999999999988889999999999987765443232   2  11 11  233443 2223332222 479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        87 d~lv~nAg   94 (267)
T 3t4x_A           87 DILINNLG   94 (267)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.46  E-value=0.00054  Score=57.34  Aligned_cols=80  Identities=23%  Similarity=0.446  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC-eee--eCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK----FGFD-DAF--NYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.+++|+||+|++|..+++.+...|++|+++.++.++.+.+.++    .+.. ..+  |..+.+++.+.+.++.  -++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999998888999999999998776554422    3432 222  3344323333333322  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 ~d~vi~~Ag   94 (248)
T 2pnf_A           86 IDILVNNAG   94 (248)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.46  E-value=0.00056  Score=59.21  Aligned_cols=80  Identities=10%  Similarity=0.211  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++    +.. .+  .|-.+.+++.+.+.+..  .+.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999988889999999999987765544233    432 22  24444323333333321  247


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.44  E-value=0.00062  Score=58.61  Aligned_cols=80  Identities=19%  Similarity=0.239  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHh-----CCC-e--eeeCCChhhHHHHHHHhCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC---YVVGSAGSKEKVDLLKNKF-----GFD-D--AFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga---~V~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~v~~~~~  219 (339)
                      .|.++||+||++++|.++++.+...|+   +|+++.++.++.+.+.+++     +.. .  ..|-.+.+++.+.+.++..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999998877766676   9999999988876665343     321 1  2344444345555555433


Q ss_pred             --CCccEEEECCC
Q 037444          220 --QGIDIYFENVG  230 (339)
Q Consensus       220 --g~~d~vid~~g  230 (339)
                        |++|++|++.|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.44  E-value=0.0025  Score=48.33  Aligned_cols=94  Identities=14%  Similarity=0.069  Sum_probs=65.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      .++|+|.|. |.+|..+++.++..|.+|+++.+++++.+.++ +.|... +..+..  -.+.+++..-.++|+++-+++.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~-i~gd~~--~~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRA-VLGNAA--NEEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEE-EESCTT--SHHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCE-EECCCC--CHHHHHhcCcccCCEEEEECCC
Confidence            468999996 99999999999999999999999999999888 777643 332221  1223333322379999999996


Q ss_pred             hh----HHHHHHhhccCCEEEEE
Q 037444          232 KM----LDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       232 ~~----~~~~~~~l~~~G~~v~~  250 (339)
                      +.    .-...+.+.+..+++..
T Consensus        82 ~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             hHHHHHHHHHHHHHCCCCeEEEE
Confidence            52    22344455566676654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.43  E-value=0.00057  Score=57.46  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+.+.+.+.++..  +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999988888999999999987665443232   332 12  233333133333332211  379


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus        90 d~vi~~Ag   97 (255)
T 1fmc_A           90 DILVNNAG   97 (255)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.42  E-value=0.00052  Score=58.00  Aligned_cols=106  Identities=8%  Similarity=0.063  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC--ee--eeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD--DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~--~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      .|.++||+||+|  ++|.++++.+...|++|+++.++++..+.+.+   +++..  ..  .|-.++++..+.+.+...  
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            588999999876  89999999999999999999998776555442   33432  22  344443233333333322  


Q ss_pred             CCccEEEECCChh---------------hH---------------HHHHHhhccCCEEEEEeccccc
Q 037444          220 QGIDIYFENVGGK---------------ML---------------DAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       220 g~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      |++|+++++.|..               .+               ......++.+|++|.+++..+.
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~  151 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE  151 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            4799999987621               11               1123455678999999876553

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.42  E-value=0.00044  Score=56.79  Aligned_cols=96  Identities=13%  Similarity=0.169  Sum_probs=63.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh-
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-  232 (339)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.    +.-..++..+-. +..+.+.+... ++|+||++.|.. 
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~~D~~-d~~~~~~~~~~-~~d~vi~~ag~~~   75 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----YNNVKAVHFDVD-WTPEEMAKQLH-GMDAIINVSGSGG   75 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----CTTEEEEECCTT-SCHHHHHTTTT-TCSEEEECCCCTT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----cCCceEEEeccc-CCHHHHHHHHc-CCCEEEECCcCCC
Confidence            69999999999999999998899999999998765331    111123333222 21334555443 699999999842 


Q ss_pred             ---------hHHHHHHhhccC--CEEEEEecccc
Q 037444          233 ---------MLDAVLLNMRLR--GRIAVCGMISQ  255 (339)
Q Consensus       233 ---------~~~~~~~~l~~~--G~~v~~g~~~~  255 (339)
                               .....++.++..  +++|.+++...
T Consensus        76 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence                     123344444443  58888877443

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.42  E-value=0.00068  Score=58.23  Aligned_cols=78  Identities=22%  Similarity=0.246  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD--DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~--~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+.+.++   .+..  .+  .|-.+.+.+.+.+.+...  ++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999998888999999999998876654422   3432  22  233333123333332211  47


Q ss_pred             ccEEEEC
Q 037444          222 IDIYFEN  228 (339)
Q Consensus       222 ~d~vid~  228 (339)
                      +|++|++
T Consensus       107 iD~li~n  113 (286)
T 1xu9_A          107 LDMLILN  113 (286)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEC
Confidence            9999998

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.41  E-value=0.00072  Score=58.57  Aligned_cols=80  Identities=16%  Similarity=0.242  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--------CCC-ee--eeCCChhhHHHHHHHhCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF--------GFD-DA--FNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~--------g~~-~v--~~~~~~~~~~~~v~~~~~  219 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++        +.. ..  .|-.+.+.+.+.+.++..
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4689999999999999999988889999999999987765544332        221 12  233333233333333221


Q ss_pred             --CCccEEEECCC
Q 037444          220 --QGIDIYFENVG  230 (339)
Q Consensus       220 --g~~d~vid~~g  230 (339)
                        +++|++|++.|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              36999999987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.41  E-value=0.00018  Score=59.97  Aligned_cols=96  Identities=19%  Similarity=0.170  Sum_probs=63.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+|||+||+|.+|.++++.+...| ++|+++++++++.+.+. ..+. .++  |..+.    +.+.+... ++|+||.+.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~-~~~~~Dl~d~----~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNS-QIIMGDVLNH----AALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTE-EEEECCTTCH----HHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCc-EEEEecCCCH----HHHHHHhc-CCCEEEEcC
Confidence            579999999999999999999999 79999999877543222 1122 222  33332    23333322 589999998


Q ss_pred             Chh----hHHHHHHhhccC--CEEEEEecccc
Q 037444          230 GGK----MLDAVLLNMRLR--GRIAVCGMISQ  255 (339)
Q Consensus       230 g~~----~~~~~~~~l~~~--G~~v~~g~~~~  255 (339)
                      +..    ..+..+..++..  +++|.+++...
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~  128 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSLGI  128 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEeccee
Confidence            864    233455555543  68998876443

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.41  E-value=0.00048  Score=58.48  Aligned_cols=80  Identities=26%  Similarity=0.428  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC--ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASG-AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD--DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g-~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~--~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+| ++|.++++.+...|++|++++++.++.+.+.+++   +..  .+  .|-.+.+++.+.+.++..  +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            578999999985 8999999988889999999999988766555344   211  12  244443233333333322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus       101 ~id~li~~Ag  110 (266)
T 3o38_A          101 RLDVLVNNAG  110 (266)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCC
Confidence            7999999988

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.41  E-value=0.00058  Score=57.69  Aligned_cols=80  Identities=16%  Similarity=0.219  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++ +.++.+.+.+++   +.. .+  .|..+.+++.+.+.++..  ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4679999999999999999888888999999998 766655443232   332 12  233433233333333321  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 id~li~~Ag   94 (261)
T 1gee_A           86 LDVMINNAG   94 (261)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.41  E-value=0.00055  Score=58.42  Aligned_cols=78  Identities=14%  Similarity=0.243  Sum_probs=56.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C-ee--eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D-DA--FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~-~v--~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .++||+||+|++|.++++.+...|++|+++.++.++.+.+.+++..  . ..  .|-.+.+++.+.+.+...  +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999998888999999999998887666545532  1 12  244443234444444322  378999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus       102 vnnAG  106 (272)
T 2nwq_A          102 INNAG  106 (272)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.41  E-value=0.00059  Score=57.74  Aligned_cols=80  Identities=16%  Similarity=0.198  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++ .++.++.+.+.+++   +.. ..  .|-.+.+++.+.+.+...  ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999987 77777665554333   332 12  244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        83 id~lv~nAg   91 (258)
T 3oid_A           83 LDVFVNNAA   91 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.40  E-value=0.00036  Score=58.41  Aligned_cols=75  Identities=31%  Similarity=0.427  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCe-e--eeCCChhhHHHHHHHhC-CCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKNKFGFDD-A--FNYKEEPDLDAALKRCF-PQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~~~g~~~-v--~~~~~~~~~~~~v~~~~-~g~~d~  224 (339)
                      .|.++||+||++++|.+.++.+...|++|+++.++.  +..+.++ +.|... .  .|-.++ +   .+++.. .+++|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence            588999999999999999999999999999999874  3345555 666532 2  233332 1   222222 258999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ++++.|
T Consensus        83 LVNNAG   88 (247)
T 4hp8_A           83 LVNNAG   88 (247)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.40  E-value=0.00064  Score=57.52  Aligned_cols=80  Identities=14%  Similarity=0.127  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---C-------C-Cee--eeCCChhhHHHHHHHh
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---G-------F-DDA--FNYKEEPDLDAALKRC  217 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g-------~-~~v--~~~~~~~~~~~~v~~~  217 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++   +       . ..+  .|-.+.+.+.+.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999999999999999888889999999999988766554233   1       1 122  2333331333333332


Q ss_pred             CC--CCc-cEEEECCC
Q 037444          218 FP--QGI-DIYFENVG  230 (339)
Q Consensus       218 ~~--g~~-d~vid~~g  230 (339)
                      ..  +++ |++|++.|
T Consensus        86 ~~~~g~i~d~vi~~Ag  101 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAG  101 (264)
T ss_dssp             HHHHSSCCSEEEECCC
T ss_pred             HHHhCCCCeEEEECCC
Confidence            21  356 99999987

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.39  E-value=0.00065  Score=58.19  Aligned_cols=81  Identities=15%  Similarity=0.231  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHHH---hCCC-e--eeeCCChhhH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-------------SKEKVDLLKNK---FGFD-D--AFNYKEEPDL  210 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-------------~~~~~~~~~~~---~g~~-~--v~~~~~~~~~  210 (339)
                      -.|.++||+||++++|.++++.+...|++|+++.+             +.++.+.+.+.   .|.. .  ..|-.+.+++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            36789999999999999999998899999999987             55655544322   2332 1  2344443233


Q ss_pred             HHHHHHhCC--CCccEEEECCC
Q 037444          211 DAALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       211 ~~~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.+.+...  +++|++|++.|
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg  114 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAG  114 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            333333222  47999999987

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.39  E-value=0.00057  Score=58.71  Aligned_cols=80  Identities=13%  Similarity=0.341  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.++.++.+.+.+++   +.. ..  .|-.+.+.+.+.+.++.  -+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999999999999999888888999999988877665544233   432 12  24444323333333322  2479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       123 d~li~~Ag  130 (285)
T 2c07_A          123 DILVNNAG  130 (285)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.38  E-value=0.0006  Score=57.61  Aligned_cols=79  Identities=11%  Similarity=0.212  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +.++||+||+|++|.++++.+...|++|+++.++.++  .+.+.+++   +.. ..  .|-.+.+++.+.+.+...  ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5689999999999999998888889999999988766  44443233   332 12  244443233333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        82 iD~lv~nAg   90 (258)
T 3a28_C           82 FDVLVNNAG   90 (258)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.38  E-value=0.00098  Score=56.29  Aligned_cols=80  Identities=18%  Similarity=0.249  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh-----CCC-ee--eeCCChhhHHHHHHHhC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKL---AGCYVVGSAGSKEKVDLLKNKF-----GFD-DA--FNYKEEPDLDAALKRCF-  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~---~ga~V~~~~~~~~~~~~~~~~~-----g~~-~v--~~~~~~~~~~~~v~~~~-  218 (339)
                      .+.++||+||+|++|.++++.+..   .|++|++++++.++.+.+.+++     +.. ..  .|-.+.+++.+.+.+.. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            467899999999999998877776   8999999999988766554343     322 12  24444323444444432 


Q ss_pred             ---CCCcc--EEEECCC
Q 037444          219 ---PQGID--IYFENVG  230 (339)
Q Consensus       219 ---~g~~d--~vid~~g  230 (339)
                         .|++|  ++|++.|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence               24678  9999876

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.38  E-value=0.00056  Score=57.09  Aligned_cols=75  Identities=15%  Similarity=0.255  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      +.++||+||+|++|.++++.+...|++|++++++.++  ..+ +++... ..|-.+. +..+.+.+...  +++|++|++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence            5689999999999999999988899999999998775  333 556321 1233332 44444433321  479999999


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        78 Ag   79 (239)
T 2ekp_A           78 AA   79 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.38  E-value=0.001  Score=57.02  Aligned_cols=81  Identities=11%  Similarity=0.179  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHh----CCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKF----GFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+ +.++.+.+.+++    +.. ..  .|-.+.+++.+.+.++..  |
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4689999999999999999999899999999998 555544443233    222 11  244443233333333321  4


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|++|++.|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.38  E-value=0.00036  Score=59.70  Aligned_cols=78  Identities=15%  Similarity=0.156  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHH---HHHHHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLD---AALKRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~---~~v~~~~~g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++++++++.+.+.+++   +.. ..  .|-.+..+..   +.+.+.  ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence            5789999999999999999998899999999999876654443232   432 12  2333321233   333333  57


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       110 iD~lvnnAg  118 (275)
T 4imr_A          110 VDILVINAS  118 (275)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999988

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.37  E-value=0.0013  Score=55.21  Aligned_cols=73  Identities=29%  Similarity=0.351  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee-eCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF-NYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      ..+.++||+||+|++|.++++.+...|++|++++++++.   ++ +++...++ |- .. +....+.++.  ++|++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence            467899999999999999999888899999999998743   33 45432222 22 21 3444444332  69999999


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        89 Ag   90 (249)
T 1o5i_A           89 AG   90 (249)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.37  E-value=0.00045  Score=58.23  Aligned_cols=95  Identities=17%  Similarity=0.191  Sum_probs=59.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      ++||+||+|++|.++++.+...|++|+++++++++.+       .....|-.+.+.+.+.+.+ ..+++|++|++.|...
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~Dl~~~~~v~~~~~~-~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------ADLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCCT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-------cccccCCCCHHHHHHHHHH-hCCCCCEEEECCCCCC
Confidence            6999999999999999988889999999998754321       0101111111011222221 1247899999987321


Q ss_pred             -------------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          234 -------------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       234 -------------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                                         .+.++..++.  .|++|.+++....
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  118 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA  118 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence                               2334445544  3899999875543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.36  E-value=0.00043  Score=58.33  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|..+++.+...|++|++++++ .++.+.+.+++   +.. .+  .|..+.+++.+.+.++..  ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999888899999999987 55544433232   332 12  243433233333333322  37


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.36  E-value=0.0012  Score=49.97  Aligned_cols=76  Identities=14%  Similarity=0.137  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+|+|+|+ |.+|..+++.+...|.+|+++.+++++.+.++ +.+.. ++..+.. + .+.+.+..-+++|+++.+++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATH-AVIANAT-E-ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSE-EEECCTT-C-HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCCCCEEEECCCC
Confidence            567999997 99999999999999999999999888777665 44543 3322222 2 233433312379999999996


Q ss_pred             h
Q 037444          232 K  232 (339)
Q Consensus       232 ~  232 (339)
                      +
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.36  E-value=0.00061  Score=56.73  Aligned_cols=100  Identities=18%  Similarity=0.174  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHH---HHHHHhCC-CCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLD---AALKRCFP-QGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~---~~v~~~~~-g~~d~  224 (339)
                      .+.++||+||+|++|.++++.+...|++|+++++++++.+      +....+  |-.+.+++.   +.+.+..+ +++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3568999999999999999999899999999998765421      101111  222221222   22222222 47999


Q ss_pred             EEECCCh--------h----h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          225 YFENVGG--------K----M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       225 vid~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      +|++.|.        +    .               .+.++..++++|+++.+++....
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  134 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM  134 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc
Confidence            9999882        1    1               12334455567899998875443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.35  E-value=0.00053  Score=57.96  Aligned_cols=104  Identities=13%  Similarity=0.128  Sum_probs=69.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHhCCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD---LLKNKFGFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~---~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+   .+. +.+.. .  ..|-.++++..+.+.+...  |++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999988899999999998765433   333 34432 2  2344443233333433322  479


Q ss_pred             cEEEECCChh----------hH---------------HHHHHhhc-cCCEEEEEecccc
Q 037444          223 DIYFENVGGK----------ML---------------DAVLLNMR-LRGRIAVCGMISQ  255 (339)
Q Consensus       223 d~vid~~g~~----------~~---------------~~~~~~l~-~~G~~v~~g~~~~  255 (339)
                      |+++++.|..          .+               +.++..|+ .+|++|.+++...
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  143 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA  143 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence            9999998731          11               23444554 4799999987554

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.35  E-value=0.00052  Score=58.49  Aligned_cols=80  Identities=20%  Similarity=0.243  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+ +.+..+.+.+   ..+.. ..  .|-.+.+++.+.+.++..  |+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999998899999999887 5554444332   23432 22  244443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       107 id~lv~nAg  115 (269)
T 4dmm_A          107 LDVLVNNAG  115 (269)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.35  E-value=0.00071  Score=57.53  Aligned_cols=80  Identities=19%  Similarity=0.287  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|..+++.+...|++|+++.+ +.++.+.+.++   .+.. ..  .|-.+.+++.+.+.++..  ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5679999999999999999998889999999998 66655443322   3442 12  244443233333333221  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       100 ~d~vi~~Ag  108 (274)
T 1ja9_A          100 LDFVMSNSG  108 (274)
T ss_dssp             EEEEECCCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.34  E-value=0.0008  Score=57.78  Aligned_cols=80  Identities=16%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------------HHHHHHHHHHh---CCC-e--eeeCCChh
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS----------------KEKVDLLKNKF---GFD-D--AFNYKEEP  208 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~----------------~~~~~~~~~~~---g~~-~--v~~~~~~~  208 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++                .++.+.+.+.+   +.. .  ..|-.+.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            57899999999999999999988999999999876                55554443232   322 1  22444432


Q ss_pred             hHHHHHHHhCC--CCccEEEECCC
Q 037444          209 DLDAALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       209 ~~~~~v~~~~~--g~~d~vid~~g  230 (339)
                      ++.+.+.++..  |++|++|++.|
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg  113 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAG  113 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCc
Confidence            33333333322  47999999987

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.33  E-value=0.00079  Score=56.22  Aligned_cols=79  Identities=19%  Similarity=0.229  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC-ee-e--eCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNK---FGFD-DA-F--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~---~g~~-~v-~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +.++||+||+|++|..+++.+...|++|+++ .++.++.+.+.++   .+.. .. +  |-.+.+.+.+.+.++..  ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3579999999999999999888899999998 7787766544323   2432 12 2  33333133333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        81 ~d~li~~Ag   89 (245)
T 2ph3_A           81 LDTLVNNAG   89 (245)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.32  E-value=0.00098  Score=56.40  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+  |++|.++++.+...|++|++++++++   ..+.+.++.+....  .|-.+.+++.+.+.+...  ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999998  99999999888888999999998875   33444423343222  244443233333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        87 iD~lv~~Ag   95 (261)
T 2wyu_A           87 LDYLVHAIA   95 (261)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.32  E-value=0.0011  Score=56.84  Aligned_cols=80  Identities=18%  Similarity=0.224  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC-ee--eeCCChhhHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------------KEKVDLLKN---KFGFD-DA--FNYKEEPDLDA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------------~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~  212 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++            .++.+.+.+   ..+.. ..  .|-.+.+++.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999999999999999986            444333221   33432 12  24444323333


Q ss_pred             HHHHhCC--CCccEEEECCC
Q 037444          213 ALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       213 ~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.+...  |++|++|++.|
T Consensus        89 ~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHHHHhcCCCCEEEECCC
Confidence            3333321  47999999987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.32  E-value=0.00054  Score=57.81  Aligned_cols=80  Identities=23%  Similarity=0.247  Sum_probs=54.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhHHHHHHHhCC--CCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      |.++||+||++++|.++++.+...  |++|+.+.+++++.+.+.++++.. ..  .|-.+.+++.+.+.+...  |++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            568999999999999988766555  579999999998887776566542 12  244443233333333322  47999


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      ++++.|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9998873

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.32  E-value=0.00074  Score=57.54  Aligned_cols=81  Identities=25%  Similarity=0.326  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCC-eee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKN---KFGFD-DAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~---~~g~~-~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .|.++||+||+|++|.++++.+...|++|++++++ ++..+.+.+   +.+.. .++  |..+..++.+.+.++..  ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999998888899999999984 443333332   33432 222  33333233333433322  47


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus       108 id~li~nAg~  117 (271)
T 4iin_A          108 LSYLVNNAGV  117 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999873

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.32  E-value=0.0024  Score=54.46  Aligned_cols=100  Identities=18%  Similarity=0.149  Sum_probs=70.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----C--CCe--eeeCCChhhHHHHH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKF----G--FDD--AFNYKEEPDLDAAL  214 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~----g--~~~--v~~~~~~~~~~~~v  214 (339)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|+++..+++..+.+++.+    |  ...  ++..    |+.+. 
T Consensus        93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~----d~~~~-  165 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS----DLADS-  165 (280)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS----CGGGC-
T ss_pred             HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC----chHhc-
Confidence            5567899999999984 4 888899999875  569999999998877776332    4  222  2222    21111 


Q ss_pred             HHhCCCCccEEEECCCh--hhHHHHHHhhccCCEEEEEec
Q 037444          215 KRCFPQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                       ....+.+|+|+.....  ..+..+.+.|+++|+++.+..
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence             0112479999986654  478899999999999987643

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.31  E-value=0.00072  Score=59.15  Aligned_cols=80  Identities=23%  Similarity=0.271  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---------CCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA---------GSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~---------~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.         ++.++.+.+.++   .+...+.|..+..++...+.++.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            578999999999999999998888999999963         455554433323   34333456555423333333322


Q ss_pred             --CCCccEEEECCC
Q 037444          219 --PQGIDIYFENVG  230 (339)
Q Consensus       219 --~g~~d~vid~~g  230 (339)
                        -+++|++|++.|
T Consensus        88 ~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           88 DTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHTSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence              247999999987

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.31  E-value=0.0008  Score=56.56  Aligned_cols=75  Identities=17%  Similarity=0.331  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhC--CCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCF--PQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~--~g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.+.    + +.+.. ...|-.+.+++.+.+.+..  -+++|++|+
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999987542    2 33421 1234444323333333332  147999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        81 ~Ag   83 (250)
T 2fwm_X           81 AAG   83 (250)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.31  E-value=0.00078  Score=57.73  Aligned_cols=82  Identities=15%  Similarity=0.123  Sum_probs=54.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      ..+.++||+||+|++|.++++.+...|++|+++.+ +.++.+.+.++   .|.. ..  .|-.+.+++.+.+.++..  +
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999998899999999985 66554443323   3432 12  244443244444443322  3


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|++|++.|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.31  E-value=0.00088  Score=55.95  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGC-------YVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF  218 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga-------~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~  218 (339)
                      +.++||+||+|++|..+++.+...|+       +|+++.++.++.+.+.+++   +.. ..  .|-.+.+.+.+.+.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999988888899       9999999988766554343   321 12  24343313333333322


Q ss_pred             --CCCccEEEECCC
Q 037444          219 --PQGIDIYFENVG  230 (339)
Q Consensus       219 --~g~~d~vid~~g  230 (339)
                        -+++|++|++.|
T Consensus        82 ~~~g~id~li~~Ag   95 (244)
T 2bd0_A           82 ERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHTSCCSEEEECCC
T ss_pred             HhCCCCCEEEEcCC
Confidence              147999999987

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.30  E-value=0.0011  Score=56.52  Aligned_cols=80  Identities=19%  Similarity=0.275  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCC-ee--eeCCChhhHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------------KEKVDLLKN---KFGFD-DA--FNYKEEPDLDA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------------~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~  212 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++            .++.+.+.+   ..+.. ..  .|-.+.+++.+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            57899999999999999999988999999999876            554433321   33432 12  24444323333


Q ss_pred             HHHHhCC--CCccEEEECCC
Q 037444          213 ALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       213 ~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.+...  +++|++|++.|
T Consensus        92 ~~~~~~~~~g~id~lv~nAg  111 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAG  111 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3333322  47999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.30  E-value=0.0011  Score=57.28  Aligned_cols=80  Identities=13%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCe---eeeCCChhhHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------------KEKVDLLKN---KFGFDD---AFNYKEEPDLDA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~  212 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++            .++.+.+.+   ..+...   ..|-.+.+++.+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            57899999999999999999988999999999876            454433321   334321   234444323333


Q ss_pred             HHHHhCC--CCccEEEECCC
Q 037444          213 ALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       213 ~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.++..  |++|++|++.|
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHhCCCCEEEECCC
Confidence            3333322  47999999887

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.30  E-value=0.0045  Score=46.79  Aligned_cols=76  Identities=22%  Similarity=0.166  Sum_probs=56.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      ..+++|.|+ |.+|..+++.+...|.+|+++.+++++.+.++ +.|.. ++..+.  .-.+.+++..-.++|++|.++++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~-~~~gd~--~~~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFD-AVIADP--TDESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCE-EEECCT--TCHHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCc-EEECCC--CCHHHHHhCCcccCCEEEEecCC
Confidence            457999997 99999999999999999999999999988887 66653 332222  11233444322379999999996


Q ss_pred             h
Q 037444          232 K  232 (339)
Q Consensus       232 ~  232 (339)
                      .
T Consensus        81 ~   81 (141)
T 3llv_A           81 D   81 (141)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.30  E-value=0.003  Score=54.30  Aligned_cols=76  Identities=20%  Similarity=0.214  Sum_probs=54.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-eeeeCCChhhHHHHHHHhCCCCccE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      -+|.+++|+|++|++|.+++..+...|++|+++.++.++.+.+.+++    +.. ...|..+.    +.+.+... .+|+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~----~~~~~~~~-~~Dv  191 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAVK-GAHF  191 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHTT-TCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH----HHHHHHHH-hCCE
Confidence            36789999999999999999999999999999999988766554333    322 22344432    23333332 4899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|++.|
T Consensus       192 lVn~ag  197 (287)
T 1lu9_A          192 VFTAGA  197 (287)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999997

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.30  E-value=0.00075  Score=57.70  Aligned_cols=80  Identities=13%  Similarity=0.167  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-------------CHHHHHHHHH---HhCCC-e--eeeCCChhhHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-------------SKEKVDLLKN---KFGFD-D--AFNYKEEPDLD  211 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-------------~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~  211 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+             +.++.+.+.+   ..+.. .  ..|-.+.+++.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999999999999999998899999999987             4555444332   23332 1  22444432333


Q ss_pred             HHHHHhCC--CCccEEEECCC
Q 037444          212 AALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       212 ~~v~~~~~--g~~d~vid~~g  230 (339)
                      +.+.++..  +++|++|++.|
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg  110 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAG  110 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHcCCCCEEEECCC
Confidence            33333322  47999999987

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.29  E-value=0.00087  Score=57.77  Aligned_cols=46  Identities=15%  Similarity=0.133  Sum_probs=38.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHHh
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNKF  196 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~~  196 (339)
                      .+.++||+||+|++|.++++.+...|++|++++ ++.++.+.+.+++
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l   54 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL   54 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence            467899999999999999999888999999999 9987765554333

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=97.29  E-value=0.0043  Score=54.71  Aligned_cols=77  Identities=12%  Similarity=0.062  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHh------CCCeeeeCCChhhHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKNKF------GFDDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----~~~~~~~~~~------g~~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.    +..+.++ ..      .-..++..+-. + .+.+.+... 
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~-d-~~~~~~~~~-   99 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIR-D-LTTCEQVMK-   99 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTT-C-HHHHHHHTT-
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCC-C-HHHHHHHhc-
Confidence            357999999999999999999988999999999853    3444443 22      11123322221 2 234444444 


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|+||++.+.
T Consensus       100 ~~d~Vih~A~~  110 (351)
T 3ruf_A          100 GVDHVLHQAAL  110 (351)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            69999999983

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.29  E-value=0.00021  Score=60.03  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+.+.   +  ...|-.+.+++.+.+.+...  +++|++|++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999999999999999988889999999998765332111   1  22344443233333333221  479999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        89 Ag   90 (247)
T 1uzm_A           89 AG   90 (247)
T ss_dssp             CS
T ss_pred             CC
Confidence            87

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.28  E-value=0.00046  Score=59.37  Aligned_cols=80  Identities=15%  Similarity=0.213  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHHHh----CCC-ee--eeCCC----hhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKNKF----GFD-DA--FNYKE----EPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~~~----g~~-~v--~~~~~----~~~~~~~v~~~~  218 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++. ++.+.+.+++    +.. .+  .|-.+    .+++.+.+.++.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            467999999999999999998888999999999987 6554443233    322 12  23333    213333333322


Q ss_pred             C--CCccEEEECCC
Q 037444          219 P--QGIDIYFENVG  230 (339)
Q Consensus       219 ~--g~~d~vid~~g  230 (339)
                      .  +++|++|++.|
T Consensus       102 ~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          102 RAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HhcCCCCEEEECCC
Confidence            1  47999999887

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.27  E-value=0.0035  Score=51.61  Aligned_cols=102  Identities=12%  Similarity=0.070  Sum_probs=69.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCC-eeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFD-DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~v~~~~  218 (339)
                      ...+.+++.+||=.|  .+.|..++.+|+.+  +.+|+++..+++..+.+++.   .|.. .-+..... +..+.+....
T Consensus        50 ~~~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~  126 (221)
T 3dr5_A           50 ATTNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLA  126 (221)
T ss_dssp             HHSCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSC
T ss_pred             HhhCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhc
Confidence            333444556999887  57899999999986  67999999999887777642   3443 22222222 4444333333


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEE
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  249 (339)
                      .+.||+||-....    ..++.+.+.|+++|.++.
T Consensus       127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            4589999865542    257889999999999886

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.27  E-value=0.00052  Score=58.94  Aligned_cols=95  Identities=14%  Similarity=0.103  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|||+||+|.+|..+++.+... |.+|+++++++++...+. ..+... ..|..+.    +.+.+... ++|+||.+.+.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence            6999999999999999888777 899999999987654333 333321 1233332    33444443 69999999884


Q ss_pred             h--------hHHHHHHhhccC--CEEEEEeccc
Q 037444          232 K--------MLDAVLLNMRLR--GRIAVCGMIS  254 (339)
Q Consensus       232 ~--------~~~~~~~~l~~~--G~~v~~g~~~  254 (339)
                      .        .....++.++..  +++|.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            1        223445555543  4888887754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.26  E-value=0.0006  Score=58.59  Aligned_cols=79  Identities=22%  Similarity=0.305  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCC-ee--eeCCChhhHHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------VDLLKNKFGFD-DA--FNYKEEPDLDAALKR  216 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-----------~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~  216 (339)
                      .+.++||+||++++|.++++.+...|++|++++++.++           .+.++ ..+.. ..  .|-.+.+++.+.+.+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            57899999999999999999888889999999988652           23333 44442 12  244443233333333


Q ss_pred             hCC--CCccEEEECCC
Q 037444          217 CFP--QGIDIYFENVG  230 (339)
Q Consensus       217 ~~~--g~~d~vid~~g  230 (339)
                      +..  +++|++|++.|
T Consensus        87 ~~~~~g~id~lvnnAg  102 (285)
T 3sc4_A           87 TVEQFGGIDICVNNAS  102 (285)
T ss_dssp             HHHHHSCCSEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  37999999987

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.26  E-value=0.0012  Score=56.71  Aligned_cols=80  Identities=13%  Similarity=0.166  Sum_probs=53.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .|.++||+||+  |++|.++++.+...|++|++++++.+   ..+.+.+..+....  .|-.+.+++.+.+.++.  -++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999998  89999999988889999999998874   33444323343222  24444323333333322  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       100 iD~lv~~Ag  108 (285)
T 2p91_A          100 LDIIVHSIA  108 (285)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.25  E-value=0.00099  Score=58.51  Aligned_cols=45  Identities=16%  Similarity=0.121  Sum_probs=38.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNK  195 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~  195 (339)
                      .+.++||+||+|++|.++++.+...|++|++++ ++.++.+.+.++
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~   90 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT   90 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence            568999999999999999999989999999999 988876655433

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.24  E-value=0.0011  Score=58.17  Aligned_cols=79  Identities=20%  Similarity=0.331  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC-
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-----KEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP-  219 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-----~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~-  219 (339)
                      +.++||+||+|++|.++++.+...|++|++++++     .++.+.+.+   ..+.. ..  .|-.+.+.+.+.+.++.. 
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998775     333333331   23432 22  244443234444443322 


Q ss_pred             -CCccEEEECCC
Q 037444          220 -QGIDIYFENVG  230 (339)
Q Consensus       220 -g~~d~vid~~g  230 (339)
                       |++|++|++.|
T Consensus        85 ~g~iD~lVnnAG   96 (324)
T 3u9l_A           85 DGRIDVLIHNAG   96 (324)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             47999999998

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.24  E-value=0.0015  Score=55.80  Aligned_cols=79  Identities=24%  Similarity=0.300  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----------HHHHHHHhCCC-e--eeeCCChhhHHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-----------VDLLKNKFGFD-D--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-----------~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~  216 (339)
                      .|.++||+||++++|.++++.+...|++|++++++.++           .+.++ ..+.. .  ..|-.+.+++.+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            57899999999999999999888899999999987542           12222 33432 1  2344443233333333


Q ss_pred             hCC--CCccEEEECCC
Q 037444          217 CFP--QGIDIYFENVG  230 (339)
Q Consensus       217 ~~~--g~~d~vid~~g  230 (339)
                      +..  +++|++|++.|
T Consensus        84 ~~~~~g~iD~lvnnAG   99 (274)
T 3e03_A           84 TVDTFGGIDILVNNAS   99 (274)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            322  47999999987

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.24  E-value=0.0013  Score=56.26  Aligned_cols=81  Identities=9%  Similarity=0.136  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhCCCee--eeCCChhhHHHHHHHhC--CCC
Q 037444          150 KKGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSK--EKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~--~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      -.+.++||+||+  +++|.++++.+...|++|+++.++.  +..+.+.++.+....  .|-.+.+++.+.+.++.  -++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            357899999998  5699999988888999999999887  555555534443222  24444323333333332  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       104 id~li~nAg  112 (280)
T 3nrc_A          104 LDAIVHSIA  112 (280)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.23  E-value=0.00095  Score=55.94  Aligned_cols=77  Identities=17%  Similarity=0.273  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++.+.+. ++.-...  .|-.+. +..+.+.+.. +++|++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~-~~id~lv~~   81 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNV   81 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCH-HHHHHHHHHh-CCCCEEEEC
Confidence            4789999999999999999998889999999999987765544 3321112  344443 2222333222 479999999


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        82 Ag   83 (246)
T 2ag5_A           82 AG   83 (246)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.22  E-value=0.00091  Score=56.81  Aligned_cols=82  Identities=11%  Similarity=0.128  Sum_probs=54.9

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH---HHHHHHhCCCee--eeCCChhhHHHHHHHhC--C
Q 037444          149 PKKGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKEKV---DLLKNKFGFDDA--FNYKEEPDLDAALKRCF--P  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~--~  219 (339)
                      ..++.++||+||+  +++|.++++.+...|++|+++.+++...   +.+.++.+...+  .|-.+.+++...+.++.  .
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578899999998  9999999998888999999998875433   333223443222  34444323333333332  1


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus        91 g~id~lv~nAg  101 (271)
T 3ek2_A           91 DSLDGLVHSIG  101 (271)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.22  E-value=0.00089  Score=56.81  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+++++      ..... ...|-.+.+++.+.+.+...  +++|++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999998899999999987543      01111 12344443233333333322  37999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        81 ~Ag   83 (264)
T 2dtx_A           81 NAG   83 (264)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.21  E-value=0.0012  Score=56.23  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=51.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++...+.++ ++   +.. ..  .|-.+. +-.+.+.+..  .+++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADL-EGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCH-HHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCH-HHHHHHHHHHHhcCCC
Confidence            5789999999999999999988899999999997654333333 33   321 12  244443 2222222211  1479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       108 D~lv~nAg  115 (273)
T 3uf0_A          108 DVLVNNAG  115 (273)
T ss_dssp             CEEEECCC
T ss_pred             cEEEECCC
Confidence            99999987

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.21  E-value=0.00087  Score=56.05  Aligned_cols=81  Identities=21%  Similarity=0.274  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|..+++.+...|++|+++ .+++++.+.+.+   ..+.. ..  .|-.+.+.+.+.+.+...  ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999988899999998 455444433321   23432 22  244443233333333221  37


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.20  E-value=0.0018  Score=57.18  Aligned_cols=79  Identities=13%  Similarity=0.135  Sum_probs=55.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA-GC-YVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~-ga-~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      -.+.+|||+||+|.+|..+++.+... |. +|+++++++.+.+.+.+.+...  .++..+-. + .+.+.+... ++|+|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~-d-~~~l~~~~~-~~D~V   95 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR-D-LERLNYALE-GVDIC   95 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTT-C-HHHHHHHTT-TCSEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCC-C-HHHHHHHHh-cCCEE
Confidence            45789999999999999999887777 98 9999999988776665455321  22222211 2 233444443 69999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      |++.+.
T Consensus        96 ih~Aa~  101 (344)
T 2gn4_A           96 IHAAAL  101 (344)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999973

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.19  E-value=0.001  Score=55.70  Aligned_cols=80  Identities=24%  Similarity=0.302  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.+ +.++.+.+.+   ..+.. ..  .|-.+.+++.+.+.++..  ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999998899999998876 4454444332   23432 12  233443233333333322  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        83 id~lv~nAg   91 (246)
T 3osu_A           83 LDVLVNNAG   91 (246)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.18  E-value=0.0022  Score=57.73  Aligned_cols=100  Identities=15%  Similarity=0.153  Sum_probs=72.5

Q ss_pred             HHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.++.+. ...-.|.+|.|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|... .      ++.+.+   
T Consensus       197 lldgi~ratg~~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~-~------sL~eal---  264 (436)
T 3h9u_A          197 LVDGIKRATDVMIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQV-L------LVEDVV---  264 (436)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHT---
T ss_pred             HHHHHHHhcCCcccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCee-c------CHHHHH---
Confidence            34444332 23347899999995 99999999999999999999998887766665 566532 1      333322   


Q ss_pred             CCCCccEEEECCChh-hHH-HHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVGGK-MLD-AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g~~-~~~-~~~~~l~~~G~~v~~g~  252 (339)
                        ...|+++.+.+.. .+. ..++.++++..++.++.
T Consensus       265 --~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgR  299 (436)
T 3h9u_A          265 --EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGH  299 (436)
T ss_dssp             --TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred             --hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCC
Confidence              2489999988864 333 67788999999888874

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.18  E-value=0.0031  Score=51.22  Aligned_cols=99  Identities=16%  Similarity=0.293  Sum_probs=70.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~  218 (339)
                      ....+.++++||-.|. | .|..++.+++. +.+|+++..+++..+.+++.   .|..   .++..+.. +   .+..  
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~-~---~~~~--  119 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP-A---ALAD--  119 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT-G---GGTT--
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh-h---hccc--
Confidence            5567889999999995 4 48899999988 88999999999888777633   3543   23333222 1   1111  


Q ss_pred             CCCccEEEECCCh-h-hHHHHHHhhccCCEEEEEec
Q 037444          219 PQGIDIYFENVGG-K-MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 ~g~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .+.+|+|+...+. . .+..+.+.|+++|+++....
T Consensus       120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            1369999976553 2 67889999999999987643

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.16  E-value=0.0016  Score=56.93  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------HHHHHHHHH---HhCCCe-e--eeCCChhhHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------------KEKVDLLKN---KFGFDD-A--FNYKEEPDLDA  212 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------------~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~  212 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++            .++.+.+.+   ..+... .  .|-.+.+++.+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            57899999999999999999998999999999765            444433321   334321 2  24444323333


Q ss_pred             HHHHhCC--CCccEEEECCC
Q 037444          213 ALKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       213 ~v~~~~~--g~~d~vid~~g  230 (339)
                      .+.++..  |++|++|++.|
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHcCCCCEEEECCC
Confidence            3333322  47999999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.16  E-value=0.0017  Score=54.68  Aligned_cols=106  Identities=18%  Similarity=0.141  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCH--HHHHHHHHHh-CCC-ee--eeCCCh-hhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSK--EKVDLLKNKF-GFD-DA--FNYKEE-PDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~--~~~~~~~~~~-g~~-~v--~~~~~~-~~~~~~v~~~~~--g  220 (339)
                      .+.+++|+||+|++|.++++.+...|++ |+++.++.  +..+.+.+.. +.. .+  .|-.+. +++.+.+.++..  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999999999999999998889996 99988875  3444454222 221 12  233321 134333333322  4


Q ss_pred             CccEEEECCCh---hh---------------HHHHHHhhcc-----CCEEEEEeccccc
Q 037444          221 GIDIYFENVGG---KM---------------LDAVLLNMRL-----RGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~~  256 (339)
                      ++|++|++.|.   +.               .+.++..+..     +|+++.+++....
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~  142 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc
Confidence            79999999872   11               1223334432     5889998875543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.15  E-value=0.00047  Score=58.75  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      -..|.++||+||++++|.++++.+...|++|+++.++.+...    . ... ...|-.+.+++.+.+.++..  +++|++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   85 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL   85 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            457889999999999999999988889999999998765421    1 111 12344443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        86 v~nAg   90 (269)
T 3vtz_A           86 VNNAG   90 (269)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.14  E-value=0.0011  Score=53.58  Aligned_cols=98  Identities=13%  Similarity=0.083  Sum_probs=61.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      .+|+|+||+|.+|..+++.+...|.+|+++++++++.+... ..+. +++..+-. + .+.+.+... ++|+||++.+..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~-~~~~~D~~-~-~~~~~~~~~-~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPA-HVVVGDVL-Q-AADVDKTVA-GQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCS-EEEESCTT-S-HHHHHHHHT-TCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCce-EEEEecCC-C-HHHHHHHHc-CCCEEEECccCC
Confidence            68999999999999999998888999999999876533211 1111 23322221 2 123333332 589999998842


Q ss_pred             -----------hHHHHHHhhcc--CCEEEEEecccc
Q 037444          233 -----------MLDAVLLNMRL--RGRIAVCGMISQ  255 (339)
Q Consensus       233 -----------~~~~~~~~l~~--~G~~v~~g~~~~  255 (339)
                                 .....++.++.  -++++.+++...
T Consensus        79 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~  114 (206)
T 1hdo_A           79 NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL  114 (206)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeee
Confidence                       12333444433  358888876543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.14  E-value=0.0012  Score=55.97  Aligned_cols=80  Identities=16%  Similarity=0.243  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK---EKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~---~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~--  219 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.   ++.+.+.+++   |.. .  ..|-.+.+++.+.+.++..  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999888999999987653   3333333233   332 1  2244443233333333322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus        90 g~iD~lvnnAg  100 (262)
T 3ksu_A           90 GKVDIAINTVG  100 (262)
T ss_dssp             CSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999988

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.13  E-value=0.0051  Score=53.37  Aligned_cols=97  Identities=13%  Similarity=0.091  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhC----C-CeeeeCCChhhHHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS---KEKVDLLKNKFG----F-DDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~---~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      -.|.+++|+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    . ..+++..+.+++.+.+.     
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence            36889999997 9999999999999999 89999999   777665543432    2 13444443213333332     


Q ss_pred             CccEEEECCChhhHH------H-HHHhhccCCEEEEEec
Q 037444          221 GIDIYFENVGGKMLD------A-VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~g~~~~~------~-~~~~l~~~G~~v~~g~  252 (339)
                      .+|+||+|++.....      . ....++++..++++-.
T Consensus       226 ~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY  264 (315)
T 3tnl_A          226 ESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVY  264 (315)
T ss_dssp             TCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCC
T ss_pred             CCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEecc
Confidence            489999998732110      1 2345666666556543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.12  E-value=0.0016  Score=57.03  Aligned_cols=81  Identities=20%  Similarity=0.248  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------HHHHHHHHH---HhCCCe-e--eeCCChhhHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS----------KEKVDLLKN---KFGFDD-A--FNYKEEPDLDAA  213 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~----------~~~~~~~~~---~~g~~~-v--~~~~~~~~~~~~  213 (339)
                      -.|.++||+||++++|.++++.+...|++|++++++          .++.+.+.+   ..+... .  .|-.+.+++.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            357899999999999999999888899999999876          333333322   334321 1  233333233333


Q ss_pred             HHHhCC--CCccEEEECCC
Q 037444          214 LKRCFP--QGIDIYFENVG  230 (339)
Q Consensus       214 v~~~~~--g~~d~vid~~g  230 (339)
                      +.++..  |++|++|++.|
T Consensus       105 ~~~~~~~~g~iD~lv~nAg  123 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAG  123 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            333222  47999999987

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.12  E-value=0.0018  Score=55.17  Aligned_cols=82  Identities=22%  Similarity=0.196  Sum_probs=53.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--  219 (339)
                      ...+.++||+||+|++|.++++.+...|++|+++ .++.+..+.+.+.   .+.. .+  .|-.+.+++.+.+.++..  
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999877 6666655544322   2332 12  244443233333333322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      +++|++|++.|
T Consensus       103 g~id~li~nAg  113 (272)
T 4e3z_A          103 GRLDGLVNNAG  113 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.11  E-value=0.001  Score=56.19  Aligned_cols=80  Identities=15%  Similarity=0.153  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHHhCCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD----LLKNKFGFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~----~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|++++++.++..    .+.++.+.. ..  .|..+.+++.+.+.++.  -++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999999999999999888889999999998544322    222123432 12  24444323333333332  147


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (265)
T 1h5q_A           93 ISGLIANAG  101 (265)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.11  E-value=0.0015  Score=55.41  Aligned_cols=80  Identities=23%  Similarity=0.283  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHH-----HHHHHHHHhCCCe---eeeCCChhhHHHHHHHhC--
Q 037444          151 KGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKE-----KVDLLKNKFGFDD---AFNYKEEPDLDAALKRCF--  218 (339)
Q Consensus       151 ~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~-----~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~--  218 (339)
                      .|.++||+||+  +++|.++++.+...|++|++++++.+     ..+.+.+..+...   ..|-.+.+++.+.+.++.  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            57899999999  89999999888889999999987643     2333332345421   234444323333333332  


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      .+++|++|++.|
T Consensus        99 ~g~id~li~nAg  110 (267)
T 3gdg_A           99 FGQIDAFIANAG  110 (267)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            147999999987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.11  E-value=0.002  Score=53.04  Aligned_cols=94  Identities=15%  Similarity=0.126  Sum_probs=60.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.  .+. .++  |..+.    +.+.+... ++|+||++.|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~-~~~~~Dl~d~----~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHL-KVKKADVSSL----DEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTE-EEECCCTTCH----HHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--Cce-EEEEecCCCH----HHHHHHhc-CCCEEEEeCc
Confidence            58999999999999999999999999999999876533211  111 222  33322    23333333 5999999987


Q ss_pred             hh------------hHHHHHHhhccC--CEEEEEeccc
Q 037444          231 GK------------MLDAVLLNMRLR--GRIAVCGMIS  254 (339)
Q Consensus       231 ~~------------~~~~~~~~l~~~--G~~v~~g~~~  254 (339)
                      ..            .....++.++..  +++|.+++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            43            122344444443  4888887643

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.10  E-value=0.0015  Score=55.18  Aligned_cols=77  Identities=18%  Similarity=0.161  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-e--eeeCCChhhHHHHHHHhC-CCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-D--AFNYKEEPDLDAALKRCF-PQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~~~-~g~~d~vi  226 (339)
                      .+.++||+||++++|.++++.+...|++|+++.++.++  ... +++.. .  ..|-.+.+++...+.... .+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVA-DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHH-HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHH-hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            46789999999999999999888889999999986543  233 55542 2  234444312322222211 24799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        85 ~nAg   88 (257)
T 3tl3_A           85 NCAG   88 (257)
T ss_dssp             ECGG
T ss_pred             ECCC
Confidence            9998

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.09  E-value=0.0014  Score=55.59  Aligned_cols=94  Identities=14%  Similarity=0.024  Sum_probs=69.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .++.+||..|. |. |..+..+++.. |.+|+++..+++..+.++ +.+.. .++..+.. ++     ...++.+|+|+.
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence            57889999995 66 99999999986 789999999999988888 55432 33332221 11     122347999997


Q ss_pred             CCChhhHHHHHHhhccCCEEEEEec
Q 037444          228 NVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ......+.++.+.|+++|+++....
T Consensus       155 ~~~~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          155 IYAPCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             eCChhhHHHHHHhcCCCcEEEEEEc
Confidence            5555688999999999999987654

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.09  E-value=0.0016  Score=54.27  Aligned_cols=101  Identities=13%  Similarity=0.110  Sum_probs=69.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC---
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF---  218 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~---  218 (339)
                      ..+.++.+||-.|.  +.|..+..+++..  +.+|+++..+++..+.+++.   .|....+..... +..+.+....   
T Consensus        56 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhhc
Confidence            44567889999984  4799999999987  57999999999887777633   354321221122 3333333221   


Q ss_pred             -----------C-CCccEEEECCChh----hHHHHHHhhccCCEEEEE
Q 037444          219 -----------P-QGIDIYFENVGGK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 -----------~-g~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  250 (339)
                                 + +.+|+|+...+..    .+..+.+.|+++|.++..
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence                       2 5799999876632    567888999999998864

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.09  E-value=0.00093  Score=55.85  Aligned_cols=79  Identities=19%  Similarity=0.224  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh-CCC-ee--eeCCChhhHHHHHHHh---CCC-
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKF-GFD-DA--FNYKEEPDLDAALKRC---FPQ-  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~-g~~-~v--~~~~~~~~~~~~v~~~---~~g-  220 (339)
                      .+.++||+||+|++|.++++.+...|  ++|+++.++.++.+.++ ++ +.. .+  .|..+.+.+.+.+.++   .+. 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            35789999999999999999988899  99999999988776665 44 221 22  2333331233333322   221 


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus        81 ~id~li~~Ag   90 (250)
T 1yo6_A           81 GLSLLINNAG   90 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCcEEEECCc
Confidence            6999999887

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.08  E-value=0.0016  Score=54.51  Aligned_cols=95  Identities=18%  Similarity=0.261  Sum_probs=58.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      ++||+||+|++|..+++.+...|++|++++++.++.+       .....|..+...+.+.+.++ .+++|++|++.|...
T Consensus         3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-------ADLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------CCTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCCT
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-------ccccCCcccHHHHHHHHHHc-CCCccEEEECCCCCC
Confidence            6999999999999999888889999999998754311       01011111110222223332 247999999887311


Q ss_pred             -------------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          234 -------------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       234 -------------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                                         ++.+...++.  .++++.+++....
T Consensus        75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  118 (255)
T 2dkn_A           75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAAT  118 (255)
T ss_dssp             TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccc
Confidence                               1223334433  3899988775443

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=97.06  E-value=0.0026  Score=53.34  Aligned_cols=101  Identities=12%  Similarity=0.042  Sum_probs=69.1

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCC-
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQ-  220 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g-  220 (339)
                      ..+.++.+||-+|.  +.|..++.+|+.+  +.+|+++..+++..+.+++.   .|...-+..... +..+.+...... 
T Consensus        59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~~  135 (248)
T 3tfw_A           59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGECP  135 (248)
T ss_dssp             HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSCC
T ss_pred             HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCCC
Confidence            34567889999984  5688899999887  56999999999888777633   354321222222 444444444332 


Q ss_pred             CccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          221 GIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       221 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+|+||-....    ..+..+.+.|+++|.++.-
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~  169 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD  169 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            79999954432    2678889999999988764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.05  E-value=0.00085  Score=56.88  Aligned_cols=81  Identities=11%  Similarity=0.172  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHH--HhCCC-ee--eeCCChhhHHHHHHHh---C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAG---CYVVGSAGSKEKVDLLKN--KFGFD-DA--FNYKEEPDLDAALKRC---F  218 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~g---a~V~~~~~~~~~~~~~~~--~~g~~-~v--~~~~~~~~~~~~v~~~---~  218 (339)
                      ..+.++||+||+|++|.++++.+...|   ++|++++++.++.+.+++  ..+.. .+  .|-.+.+.+.+.+.++   .
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            356799999999999999999888889   999999988764333331  22322 22  2333332343333332   2


Q ss_pred             CC-CccEEEECCC
Q 037444          219 PQ-GIDIYFENVG  230 (339)
Q Consensus       219 ~g-~~d~vid~~g  230 (339)
                      +. ++|++|++.|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            22 6999999987

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=97.04  E-value=0.00062  Score=57.68  Aligned_cols=74  Identities=12%  Similarity=0.188  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      +|.++||+||++++|+++++.+...|++|+++.++.++      .+...  ...|-.+.++....+.+...  |++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            68999999999999999999999999999999987542      11111  12233443233333333221  4799999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.03  E-value=0.0021  Score=54.62  Aligned_cols=81  Identities=17%  Similarity=0.268  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      ..+.++||+||++++|.++++.+...|++|+++. ++.+..+...+.   .+.. .+  .|-.+.+++.+.+.++..  +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4577899999999999999999888999999998 555444333212   2322 22  344443233333333322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|++|++.|
T Consensus       103 ~id~li~nAg  112 (269)
T 3gk3_A          103 KVDVLINNAG  112 (269)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.02  E-value=0.0037  Score=54.00  Aligned_cols=102  Identities=9%  Similarity=0.012  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCC
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +.+...++++.+||-+|.  +.|..+..+++..|++|+++..+++..+.+++.   .|...-+..... ++.    ++ +
T Consensus        64 ~~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~  135 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-D  135 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-C
T ss_pred             HHHHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-C
Confidence            445567899999999994  459999999999899999999999888777633   243211111111 221    12 4


Q ss_pred             CCccEEEECCC----------------hhhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFENVG----------------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~~g----------------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|+|+....                ...+..+.+.|+++|+++....
T Consensus       136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            58999987432                1357788899999999987654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.01  E-value=0.0056  Score=52.34  Aligned_cols=105  Identities=12%  Similarity=0.047  Sum_probs=66.5

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC----CeeeeCCChhhHHHHHH
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF----DDAFNYKEEPDLDAALK  215 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~v~  215 (339)
                      .+|.+...--.+.+++|+|+ |++|.+++..+...|+ +|+++.++.++.+.+.++++.    ..+...... ++.+.+.
T Consensus       116 ~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~  193 (283)
T 3jyo_A          116 RGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIA  193 (283)
T ss_dssp             HHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHH
T ss_pred             HHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHh
Confidence            34433333346889999997 9999999998888999 799999999887766434432    122222222 4444443


Q ss_pred             HhCCCCccEEEECCChhhH-----HHHHHhhccCCEEEEEec
Q 037444          216 RCFPQGIDIYFENVGGKML-----DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~~~-----~~~~~~l~~~G~~v~~g~  252 (339)
                           .+|+||+|+.....     .-....++++..++++..
T Consensus       194 -----~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~DlvY  230 (283)
T 3jyo_A          194 -----AADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVY  230 (283)
T ss_dssp             -----HSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEECCC
T ss_pred             -----cCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEecC
Confidence                 38999999873211     112345666666566543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.01  E-value=0.0025  Score=51.43  Aligned_cols=63  Identities=14%  Similarity=0.217  Sum_probs=45.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++||+||+|++|..+++.+. .|++|+++.++.+           ....|..+.+.+.+.+.+.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence            79999999999999998888 8999999998743           1123334332334444443  47999999887

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.00  E-value=0.0031  Score=52.57  Aligned_cols=73  Identities=22%  Similarity=0.170  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+|||+||+|.+|..+++.+...  |.+|+++++++++.+.+.  .+... ..|..+.    +.+.+... ++|+||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDA----DSINPAFQ-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSH----HHHHHHHT-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCH----HHHHHHHc-CCCEEEE
Confidence            4678999999999999999888888  889999999877654321  12221 1233332    23333332 5999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        76 ~a~   78 (253)
T 1xq6_A           76 LTS   78 (253)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            887

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.97  E-value=0.0036  Score=52.59  Aligned_cols=103  Identities=16%  Similarity=0.208  Sum_probs=73.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHh
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      +.....+.++++||-.|+ | .|..+..+++..  +.+|+++..+++..+.+++.   .|....+..... |+.+.   .
T Consensus        85 i~~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIYEG---I  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGGGC---C
T ss_pred             HHHhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chhhc---c
Confidence            335678899999999984 4 488999999985  56999999999887777633   354321111111 22211   2


Q ss_pred             CCCCccEEEECCChh--hHHHHHHhhccCCEEEEEe
Q 037444          218 FPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       218 ~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g  251 (339)
                      ..+.+|+|+......  .+..+.+.|+++|+++.+.
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            223799999877753  8999999999999998764

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.97  E-value=0.0015  Score=54.10  Aligned_cols=103  Identities=11%  Similarity=0.079  Sum_probs=69.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC-C
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF-P  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~-~  219 (339)
                      ......++.+||-.|+ | .|..++.+++.. +.+|+++..+++..+.+++.   .|...-+..... +..+.+.... .
T Consensus        48 ~~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~  124 (233)
T 2gpy_A           48 HLLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELY  124 (233)
T ss_dssp             HHHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTS
T ss_pred             HHHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccC
Confidence            3344567889999984 4 788999999987 67999999999888777633   254211111111 2222222222 3


Q ss_pred             CCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          220 QGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      +.+|+|+.....    ..+..+.+.|+++|+++..
T Consensus       125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            479999976653    3677888999999998864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.96  E-value=0.0028  Score=55.68  Aligned_cols=75  Identities=15%  Similarity=0.221  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHhCC---Ceee--eCCChhhHHHHHHHhCCCCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV--DLLKNKFGF---DDAF--NYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~--~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.++.  +.++ .++.   ...+  |..+.+.+.+.+...   ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence            57899999999999999988888899999999876532  2333 4421   1122  333321233333322   6899


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ||++.+
T Consensus        79 vih~A~   84 (345)
T 2z1m_A           79 VYNLAA   84 (345)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999987

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.96  E-value=0.0012  Score=56.42  Aligned_cols=80  Identities=23%  Similarity=0.326  Sum_probs=53.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .+.++||+||+|++|.+++..+...|++|+++.++.++.+.+.+   ..+.. ..  .|-.+.+++.+.+.++..  +.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999998888889999999987654433321   23432 22  243443233333333221  369


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |++|++.|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999887

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.95  E-value=0.0022  Score=54.17  Aligned_cols=80  Identities=16%  Similarity=0.218  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.+ ..+.+++.+   +.. .+  .|-.+.+++.+.+.++..  ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3578999999999999999988889999999866544 344444222   211 12  344443233333433322  37


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.95  E-value=0.0054  Score=49.56  Aligned_cols=100  Identities=12%  Similarity=0.130  Sum_probs=70.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ....++++++||-.|+ | .|..++.+++.. +.+|+++..+++..+.+++.   .|.+  .++..+.. +   .+..  
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~---~~~~--  105 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAP-E---GLDD--  105 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTT-T---TCTT--
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChh-h---hhhc--
Confidence            5567889999999994 4 588999999886 46999999999887777632   3443  22322221 1   1110  


Q ss_pred             CCCccEEEECCC----hhhHHHHHHhhccCCEEEEEec
Q 037444          219 PQGIDIYFENVG----GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 ~g~~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .+.+|+|+....    ...+..+.+.|+++|+++....
T Consensus       106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            136999998765    2477889999999999987643

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.94  E-value=0.0045  Score=53.88  Aligned_cols=102  Identities=14%  Similarity=0.106  Sum_probs=70.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCC
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +.+...+.++.+||-+|. | .|..+..+++..|++|+++..+++..+.+++.+   |...-+..... ++    .+. +
T Consensus        82 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~  153 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-A  153 (318)
T ss_dssp             HHTTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-C
T ss_pred             HHHhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-C
Confidence            335567889999999994 4 488899999888999999999999888877332   33211111111 21    111 2


Q ss_pred             CCccEEEEC-----CCh----hhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFEN-----VGG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|+|+..     ++.    ..+..+.+.|+++|+++....
T Consensus       154 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          154 EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            579999976     432    267788899999999987654

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.93  E-value=0.0027  Score=52.65  Aligned_cols=100  Identities=13%  Similarity=0.094  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC--C-
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF--P-  219 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~--~-  219 (339)
                      ...++.+||-.|.  +.|..++.+++.+  +.+|+++..+++..+.+++.   .|....+..... +..+.+..+.  + 
T Consensus        69 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcCC
Confidence            3456789999984  4899999999987  56999999999887777632   354322222222 4444444432  2 


Q ss_pred             -CCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          220 -QGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 -g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                       +.+|+||-....    ..+..+.+.|+++|.++.-
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence             579999954432    2578899999999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.91  E-value=0.0043  Score=55.03  Aligned_cols=37  Identities=14%  Similarity=0.150  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKL--AGCYVVGSAGSKE  187 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~--~ga~V~~~~~~~~  187 (339)
                      .+.+|||+||+|.+|..+++.+..  .|++|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            467999999999999999988877  8999999998654

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.89  E-value=0.007  Score=51.48  Aligned_cols=94  Identities=11%  Similarity=0.019  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++.+++|+|+ |++|.++++.+...|++|+++.++.++.+.+.++++....++..+..+    +.+   +++|++|++++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~---~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEG---HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTT---CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hcc---CCCCEEEECCC
Confidence            6789999997 899999999999999999999999888766654665411111111101    111   47999999999


Q ss_pred             hhhHHH----HHHhhccCCEEEEEec
Q 037444          231 GKMLDA----VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~~~~~----~~~~l~~~G~~v~~g~  252 (339)
                      ......    ....++++..++++..
T Consensus       190 ~~~~~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          190 SGISGDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEecc
Confidence            543210    1233555556666544

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.89  E-value=0.0037  Score=56.26  Aligned_cols=84  Identities=15%  Similarity=0.079  Sum_probs=55.2

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH----------------HHHHHHHhCCCe-ee--eCC
Q 037444          147 CSP-KKGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKEK----------------VDLLKNKFGFDD-AF--NYK  205 (339)
Q Consensus       147 ~~~-~~g~~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~~----------------~~~~~~~~g~~~-v~--~~~  205 (339)
                      ..+ +.+.++||+||++++|++++..+.. .|++|+++.++.+.                .+.++ +.|... .+  |-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence            456 4578899999999999998777776 99999999866432                13344 556532 22  333


Q ss_pred             Chhh---HHHHHHHhCCCCccEEEECCCh
Q 037444          206 EEPD---LDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       206 ~~~~---~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+.   +.+.+.+..+|++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            3312   2333444443689999998874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.88  E-value=0.019  Score=42.90  Aligned_cols=77  Identities=17%  Similarity=0.167  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+|+|+|+ |.+|..+++.+...|.+|+++.+++++.+.+.+.++.. ++..+.. + .+.+.+..-.++|+||.+++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCT-K-IKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTT-S-HHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcE-EEEcCCC-C-HHHHHHcCcccCCEEEEeeCC
Confidence            458999996 99999999998889999999999988877776345553 2322221 2 122333222379999999986


Q ss_pred             h
Q 037444          232 K  232 (339)
Q Consensus       232 ~  232 (339)
                      +
T Consensus        80 ~   80 (140)
T 1lss_A           80 E   80 (140)
T ss_dssp             H
T ss_pred             c
Confidence            5

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.87  E-value=0.0021  Score=54.08  Aligned_cols=81  Identities=23%  Similarity=0.303  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHH----HHHHHHHhCCC-ee--eeCCChhhHHHHHHHhC--
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEK----VDLLKNKFGFD-DA--FNYKEEPDLDAALKRCF--  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~----~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~~--  218 (339)
                      ..++.++||+||+|++|.++++.+...|++|++++ ++.++    .+.++ ..+.. .+  .|-.+.+++.+.+.++.  
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQK-ALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            45778999999999999999988888999999988 33332    22333 34432 22  23333313333333332  


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      -+++|++|++.|
T Consensus        89 ~g~id~lv~~Ag  100 (256)
T 3ezl_A           89 VGEIDVLVNNAG  100 (256)
T ss_dssp             TCCEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            147999999987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.87  E-value=0.0058  Score=50.84  Aligned_cols=100  Identities=14%  Similarity=0.066  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC----
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF----  218 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~----  218 (339)
                      ...++.+||-+|  ++.|..++.+|+.+  +.+|+++..+++..+.+++.   .|...-+..... +..+.+....    
T Consensus        67 ~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhccC
Confidence            345678999998  56788889999886  57999999999887777633   354321221111 3333333331    


Q ss_pred             -CCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          219 -PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 -~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                       .+.||+||-....    ..++.+.++|+++|.++.-
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence             3479999865442    2578889999999998753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.86  E-value=0.0016  Score=57.22  Aligned_cols=77  Identities=13%  Similarity=0.087  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHHhCCC-eee--eCCChhhHHHHHHHhCCCCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV----DLLKNKFGFD-DAF--NYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~----~~~~~~~g~~-~v~--~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .+.+|||+||+|.+|..+++.+...|++|++++++.++.    +.+.+..+.. .++  |-.+.+.+.+.+..   +++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence            456899999999999999999888999999998765432    2222122321 222  33333123333322   3799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      +||++.+
T Consensus        81 ~vih~A~   87 (341)
T 3enk_A           81 AAIHFAA   87 (341)
T ss_dssp             EEEECCC
T ss_pred             EEEECcc
Confidence            9999997

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.85  E-value=0.0022  Score=54.79  Aligned_cols=96  Identities=18%  Similarity=0.236  Sum_probs=61.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|.+|..+++.+...  |.+|+++++++++.+.+. ..+...+ .|..+.    +.+.+... ++|+||++.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence            4899999999999999888777  899999999877655554 4444321 233332    33444443 5899999987


Q ss_pred             hh------hHHHHHHhhcc-C-CEEEEEecccc
Q 037444          231 GK------MLDAVLLNMRL-R-GRIAVCGMISQ  255 (339)
Q Consensus       231 ~~------~~~~~~~~l~~-~-G~~v~~g~~~~  255 (339)
                      ..      .....++.++. + ++++.+++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHA  107 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence            41      22334444443 3 58888876443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.85  E-value=0.00076  Score=57.12  Aligned_cols=76  Identities=17%  Similarity=0.149  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++..    ..... ...|-.+.+++.+.+.+...  |++|++|+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~  102 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----DPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN  102 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4679999999999999999998889999999998754321    11111 11244443233333333222  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus       103 nAg  105 (260)
T 3un1_A          103 NAG  105 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.85  E-value=0.0018  Score=61.92  Aligned_cols=80  Identities=21%  Similarity=0.287  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------CHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---------SKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---------~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      .|.++||+||++++|.++++.+...|++|+++++         +.++.+.+.+   ..+...+.|..+..+..+.+.++.
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999988889999999876         3333332221   344444555555424444444443


Q ss_pred             C--CCccEEEECCC
Q 037444          219 P--QGIDIYFENVG  230 (339)
Q Consensus       219 ~--g~~d~vid~~g  230 (339)
                      .  +++|++|++.|
T Consensus        98 ~~~g~iDiLVnnAG  111 (613)
T 3oml_A           98 KAFGRVDILVNNAG  111 (613)
T ss_dssp             -------CEECCCC
T ss_pred             HHCCCCcEEEECCC
Confidence            3  37999999987

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.85  E-value=0.0031  Score=50.99  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=50.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++||+||+|++|..+++.+...  +|+++++++++.+.+.++++. ..+  |..+.+.+.+.+.+  .+++|++|++.|
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            6899999999999988766555  999999998877766545543 322  33333133333333  247999999987

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.84  E-value=0.0029  Score=53.67  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      .+.++||+||+|++|.++++.+...|++|+++. ++.++.+...++   .+.. .+  .|-.+.+++.+.+.+...  ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999997755 555544433322   2332 22  244443233333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|++|++.|
T Consensus       105 id~li~nAg  113 (267)
T 4iiu_A          105 WYGVVSNAG  113 (267)
T ss_dssp             CSEEEECCC
T ss_pred             ccEEEECCC
Confidence            999999987

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=96.84  E-value=0.0037  Score=55.33  Aligned_cols=76  Identities=17%  Similarity=0.227  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--C-Ceee--eCCChhhHHHHHHHhCCCCccEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG--F-DDAF--NYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g--~-~~v~--~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+.  . ..++  |..+...+.+.+...   ++|+||
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi   85 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF   85 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence            5789999999999999999888889999999987654332221221  1 1222  333321222333222   689999


Q ss_pred             ECCC
Q 037444          227 ENVG  230 (339)
Q Consensus       227 d~~g  230 (339)
                      ++.+
T Consensus        86 h~A~   89 (357)
T 1rkx_A           86 HMAA   89 (357)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            9988

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.82  E-value=0.00059  Score=57.54  Aligned_cols=74  Identities=18%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhC--CCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCF--PQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~--~g~~d~vid  227 (339)
                      .+.++||+||+|++|.++++.+...|++|+++.++.++.+    +  .. ...|-.+.+++.+.+.+..  -+++|++|+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~--~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----G--FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----T--SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----c--ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999999999999999998889999999998754322    1  11 1224444323333333322  247999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        94 nAg   96 (253)
T 2nm0_A           94 NAG   96 (253)
T ss_dssp             ECS
T ss_pred             CCC
Confidence            887

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.81  E-value=0.0035  Score=54.96  Aligned_cols=76  Identities=21%  Similarity=0.204  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----CCC-eee---eCCChhhHHHHHHHhCCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF----GFD-DAF---NYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~----g~~-~v~---~~~~~~~~~~~v~~~~~g~  221 (339)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+.+.+    +.. .++   |..+.    +.+.+... +
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~~~~~~~-~   83 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ----GAYDEVIK-G   83 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST----TTTTTTTT-T
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh----HHHHHHHc-C
Confidence            45789999999999999999888888999999999887765554221    211 122   32222    12222222 6


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+||++.+
T Consensus        84 ~d~vih~A~   92 (342)
T 1y1p_A           84 AAGVAHIAS   92 (342)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEEeCC
Confidence            999999987

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.81  E-value=0.0093  Score=46.75  Aligned_cols=102  Identities=17%  Similarity=0.238  Sum_probs=70.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCC-eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNK---FGFD-DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ....+.++++||-.|. | .|..+..+++.. +.+|+++..+++..+.+++.   .|.. .++-..   +..+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---d~~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQ---GAPRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEEC---CTTGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEec---chHhhhhc-cC
Confidence            4457889999999994 4 499999999887 56999999999887777632   3443 332111   21111211 11


Q ss_pred             CCccEEEECCCh---hhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFENVGG---KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|+|+.....   ..+..+.+.|+++|+++....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            479999976653   368899999999999986543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.80  E-value=0.031  Score=42.76  Aligned_cols=96  Identities=11%  Similarity=0.055  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      ..+++|.|+ |.+|..+++.+...|.+|+++.++ +++.+.+.+.+.. ..++..+.. + .+.+++..-.++|+|+-++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~-~-~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSN-D-SSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTT-S-HHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCC-C-HHHHHHcChhhCCEEEEec
Confidence            467999996 999999999999999999999986 4655555523321 234433322 2 2334443223799999999


Q ss_pred             ChhhHHH----HHHhhccCCEEEEE
Q 037444          230 GGKMLDA----VLLNMRLRGRIAVC  250 (339)
Q Consensus       230 g~~~~~~----~~~~l~~~G~~v~~  250 (339)
                      +.+..+.    ..+.+.+..+++..
T Consensus        80 ~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           80 DNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             CChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9763332    23333344566553

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.80  E-value=0.0018  Score=54.17  Aligned_cols=75  Identities=13%  Similarity=0.112  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH-----HHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL-----KRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v-----~~~~~--g~~d  223 (339)
                      .+.++||+||+|++|.++++.+.. |++|+++.++.++.+.+. +......+..    |+.+..     .+...  +++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence            367899999999999998877655 899999999998887776 4322222222    222221     11111  3799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      ++|++.|.
T Consensus        78 ~lv~~Ag~   85 (245)
T 3e9n_A           78 TLVHAAAV   85 (245)
T ss_dssp             EEEECC--
T ss_pred             EEEECCCc
Confidence            99999883

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.80  E-value=0.0074  Score=50.75  Aligned_cols=102  Identities=8%  Similarity=-0.014  Sum_probs=72.1

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC----eeeeCCChhhHHHHHHHh
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD----DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.+...+.++.+||-.|.  +.|..+..+++..|++|+++..+++..+.++ +....    .++..+-. ++     ..
T Consensus        46 ~~~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~d~~-~~-----~~  116 (266)
T 3ujc_A           46 KILSDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMAN-ERVSGNNKIIFEANDIL-TK-----EF  116 (266)
T ss_dssp             HHTTTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HTCCSCTTEEEEECCTT-TC-----CC
T ss_pred             HHHHhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhhcCCCeEEEECccc-cC-----CC
Confidence            3435567889999999984  4888999999887999999999999988888 44321    22222221 11     11


Q ss_pred             CCCCccEEEECCCh---------hhHHHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVGG---------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ..+.+|+|+....-         ..+..+.+.|+++|+++....
T Consensus       117 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          117 PENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            23489999985431         156788899999999987754

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.79  E-value=0.0068  Score=48.45  Aligned_cols=96  Identities=11%  Similarity=0.060  Sum_probs=64.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHhCCCeee-e--CCChhhHHHH
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAG----------CYVVGSAGSKEKVDLLKNKFGFDDAF-N--YKEEPDLDAA  213 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~g----------a~V~~~~~~~~~~~~~~~~~g~~~v~-~--~~~~~~~~~~  213 (339)
                      ..++++++||-.|+ |+ |..+..+++..|          .+|+++..++..      .+.....+ .  .... +....
T Consensus        18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~   88 (196)
T 2nyu_A           18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQR   88 (196)
T ss_dssp             CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHH
T ss_pred             CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHH
Confidence            44788999999995 65 999999999886          789999987632      11111223 2  1222 34444


Q ss_pred             HHHhCCC-CccEEEE-----CCCh-------------hhHHHHHHhhccCCEEEEEe
Q 037444          214 LKRCFPQ-GIDIYFE-----NVGG-------------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       214 v~~~~~g-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +.....+ .+|+|+.     +.+.             ..+..+.+.|+++|+++...
T Consensus        89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence            5555555 8999994     3331             34667889999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.79  E-value=0.0033  Score=59.92  Aligned_cols=105  Identities=19%  Similarity=0.177  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH---------HHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK---------EKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~---------~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      .|.+++|+||++++|.+.++.+...|++|++..++.         ++.+.+.+   ..|...+.|..+..+....+.+..
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999987543         33332221   334433445444323333333322


Q ss_pred             C--CCccEEEECCChh-----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 037444          219 P--QGIDIYFENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMISQ  255 (339)
Q Consensus       219 ~--g~~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  255 (339)
                      .  |++|+++++.|..           .               .+.++..|+.  +|++|.+++..+
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag  153 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG  153 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            1  4799999998731           1               1234555543  589999877543

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.79  E-value=0.0096  Score=49.85  Aligned_cols=100  Identities=13%  Similarity=0.075  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC----
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF----  218 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~----  218 (339)
                      ...++.+||-+|  .+.|..++.+|+.+  +.+|+++..+++..+.+++.   .|...-+..... +..+.+....    
T Consensus        76 ~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~~  152 (247)
T 1sui_A           76 KLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDEK  152 (247)
T ss_dssp             HHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSGG
T ss_pred             HhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhccC
Confidence            345678999998  57888999999987  67999999998877777632   344221221111 3333333321    


Q ss_pred             -CCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          219 -PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 -~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                       .+.||+||-....    ..+..+.++|+++|.++.-
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence             3479999864432    3677899999999998753

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.78  E-value=0.0052  Score=50.38  Aligned_cols=101  Identities=14%  Similarity=0.053  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhC---
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCF---  218 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~---  218 (339)
                      ....++.+||=.|  .+.|..++.+++..  +++|+++..+++..+.+++.   .|....+..... +..+.+....   
T Consensus        54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  130 (223)
T 3duw_A           54 VQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIENEK  130 (223)
T ss_dssp             HHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred             HHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence            3456788999998  45788899999887  67999999999887776632   354321111111 3333333322   


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+.+|+||-....    ..+..+.+.|+++|.++.-
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~  166 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD  166 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence            1469999954432    2678889999999987754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.77  E-value=0.0033  Score=52.37  Aligned_cols=101  Identities=15%  Similarity=0.143  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHH---HhCC-CCcc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALK---RCFP-QGID  223 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~---~~~~-g~~d  223 (339)
                      ..+.++||+||+|++|.++++.+...|++|+++++++++.+      +....  .|-.+.+++.+.+.   +..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            35779999999999999999998889999999998765321      11111  22222212222222   2222 4799


Q ss_pred             EEEECCCh--------h----h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          224 IYFENVGG--------K----M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       224 ~vid~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      ++|++.|.        +    .               .+.++..++++|+++.+++....
T Consensus        79 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  138 (241)
T 1dhr_A           79 AILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL  138 (241)
T ss_dssp             EEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             EEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHc
Confidence            99999872        1    1               12233445557899998875543

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.77  E-value=0.0043  Score=52.09  Aligned_cols=99  Identities=13%  Similarity=0.067  Sum_probs=71.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCe--eeeCCChhhHHHHHHH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKF----GFDD--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~----g~~~--v~~~~~~~~~~~~v~~  216 (339)
                      ....+.++++||-.|+ | .|..+..+++..  +.+|+++..+++..+.+++.+    |.+.  ++..    ++.+.  .
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~----d~~~~--~  161 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG----KLEEA--E  161 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES----CGGGC--C
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC----chhhc--C
Confidence            5567899999999995 4 489999999986  569999999998888777432    5332  2222    21111  1


Q ss_pred             hCCCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +..+.+|+|+.....  ..+..+.+.|+++|+++.+.
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            122479999986664  47889999999999998764

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.77  E-value=0.0033  Score=51.79  Aligned_cols=102  Identities=12%  Similarity=0.037  Sum_probs=68.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCC--
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~--  219 (339)
                      ....++.+||-.|.  +.|..++.+++.+  +.+|+++..+++..+.+++.   .|...-+..... +..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhcC
Confidence            44567889999984  4889999999876  56999999998887777633   244211221111 33333333321  


Q ss_pred             --CCccEEEECCCh----hhHHHHHHhhccCCEEEEEe
Q 037444          220 --QGIDIYFENVGG----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 --g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                        +.+|+|+.....    ..+..+.++|+++|.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence              479998865442    36888999999999988753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.76  E-value=0.006  Score=56.01  Aligned_cols=80  Identities=18%  Similarity=0.276  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCCCe-eeeCCChhhHHHHHH---HhCCCCccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--KVDLLKNKFGFDD-AFNYKEEPDLDAALK---RCFPQGIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~--~~~~~~~~~g~~~-v~~~~~~~~~~~~v~---~~~~g~~d~  224 (339)
                      ++.++||+||+|++|..+++.+...|++|+++.++..  ..+...++.+... ..|-.+.+.+...+.   +..++.+|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5679999999999999998888888999999987643  2333322555432 234333313333333   333335999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      +|++.|
T Consensus       292 lV~nAG  297 (454)
T 3u0b_A          292 LVNNAG  297 (454)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=96.73  E-value=0.0041  Score=54.80  Aligned_cols=94  Identities=26%  Similarity=0.231  Sum_probs=59.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHH--HhCCCe-eeeCCChhhHHHHHHHhCCCCccE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKN--KFGFDD-AFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----~~~~~~~~--~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+.+  ..+... ..|..+.+.+.+.+++   .++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCE
Confidence            35799999999999999999888899999999876    44443331  234432 1233333133333322   27999


Q ss_pred             EEECCChh---hHHHHHHhhccCC---EEE
Q 037444          225 YFENVGGK---MLDAVLLNMRLRG---RIA  248 (339)
Q Consensus       225 vid~~g~~---~~~~~~~~l~~~G---~~v  248 (339)
                      ||.+.+..   .....++.++..|   +++
T Consensus        87 Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           87 VVSTVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             EEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             EEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            99999853   2334555555444   555

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.73  E-value=0.0039  Score=53.22  Aligned_cols=95  Identities=22%  Similarity=0.265  Sum_probs=62.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|.+|..+++.+...  |.+|++++++.++.+.+. ..+...+ .|..+.    +.+.+... ++|+||++.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence            6999999999999999888777  899999999877655554 4444321 233332    33444443 5999999987


Q ss_pred             hh--------hHHHHHHhhccC--CEEEEEeccc
Q 037444          231 GK--------MLDAVLLNMRLR--GRIAVCGMIS  254 (339)
Q Consensus       231 ~~--------~~~~~~~~l~~~--G~~v~~g~~~  254 (339)
                      ..        .....++.++..  ++++.+++..
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            31        122334444443  4888887644

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.72  E-value=0.00047  Score=58.62  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      .|.++||+||+|++|.++++.+...|++|+++.++.+..+... .+    ..|-.+.......+.++..  +++|++|++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn  101 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGLGRLDIVVNN  101 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            5789999999999999999988889999999988754322111 11    1233332122222222211  479999999


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus       102 Ag  103 (266)
T 3uxy_A          102 AG  103 (266)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=96.72  E-value=0.002  Score=56.47  Aligned_cols=79  Identities=11%  Similarity=0.123  Sum_probs=48.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCC---Ceee--eCCChhhHHHHHHHhCCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFGF---DDAF--NYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~g  220 (339)
                      .-+++.+|||+||+|.+|..+++.+...|.+|++++++.++  ...+. .+..   ..++  |..+.+.+.+.+...   
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence            34688999999999999999999888889999999987543  12222 3311   1122  333321233333222   


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+||++.+
T Consensus        86 ~~d~Vih~A~   95 (335)
T 1rpn_A           86 QPQEVYNLAA   95 (335)
T ss_dssp             CCSEEEECCS
T ss_pred             CCCEEEECcc
Confidence            6899999987

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.72  E-value=0.003  Score=51.54  Aligned_cols=99  Identities=17%  Similarity=0.219  Sum_probs=69.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCe--eeeCCChhhHHHHHHHh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FGFDD--AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~v~~~  217 (339)
                      +...+.++.+||..|+ | .|..+..+++..|  .+|+++..+++..+.+++.   .+...  ++..    +....+.  
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~----d~~~~~~--  142 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG----DGTLGYE--  142 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES----CGGGCCG--
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC----CcccCCC--
Confidence            5567889999999995 4 6999999999886  7999999999887777632   34332  2221    2111110  


Q ss_pred             CCCCccEEEECCChh-hHHHHHHhhccCCEEEEEe
Q 037444          218 FPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       218 ~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      ..+.+|+|+.+..-. ....+.+.|+++|+++..-
T Consensus       143 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          143 PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            124799999877643 4468889999999988663

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.71  E-value=0.0051  Score=50.50  Aligned_cols=101  Identities=14%  Similarity=0.086  Sum_probs=67.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCC--
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~--  219 (339)
                      ....++.+||=.|  .+.|..++.+++.+  +.+|+++..+++..+.+++.   .|...-+..... +..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence            3445778999988  45688899999876  57999999999887777633   344321211111 33333433322  


Q ss_pred             --CCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          220 --QGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 --g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                        +.+|+|+-....    ..+..+.+.|+++|.++.-
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  173 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD  173 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence              479999954442    2577888999999998864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=96.71  E-value=0.0033  Score=55.96  Aligned_cols=74  Identities=12%  Similarity=0.101  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCe-eeeCC-ChhhHHHHHHHhCCCCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDD-AFNYK-EEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~-~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +.+|||+||+|.+|..+++.+... |.+|++++++.++...+.+..+... ..|.. +...+.+.++     ++|+||++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~   98 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL   98 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence            568999999999999999888777 8999999998765544331122221 12333 3212222222     59999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .+
T Consensus        99 A~  100 (372)
T 3slg_A           99 VA  100 (372)
T ss_dssp             BC
T ss_pred             Cc
Confidence            87

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.71  E-value=0.0015  Score=54.39  Aligned_cols=96  Identities=7%  Similarity=-0.040  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-----DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ..+|.+||=+|  .|.|..+..+++..+.+|+++..+++-.+.++ +....     .++..    +..+.......+.||
T Consensus        58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~----~a~~~~~~~~~~~FD  130 (236)
T 3orh_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKG----LWEDVAPTLPDGHFD  130 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEES----CHHHHGGGSCTTCEE
T ss_pred             ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEee----hHHhhcccccccCCc
Confidence            46899999999  45788888888877789999999999888887 43221     12222    333333344445799


Q ss_pred             EE-EECCCh-----------hhHHHHHHhhccCCEEEEEe
Q 037444          224 IY-FENVGG-----------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       224 ~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .| +|+...           ..+.++.+.|+|||+++.+.
T Consensus       131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            88 454421           14567889999999998764

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.71  E-value=0.0036  Score=50.80  Aligned_cols=98  Identities=11%  Similarity=0.019  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +...++++++||-.|. | .|..+..+++. +.+|+++..+++..+.+++.   .|..  .++..+.    .+...  ..
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~----~~~~~--~~  141 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG----WQGWQ--AR  141 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG----GGCCG--GG
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc----ccCCc--cC
Confidence            5567889999999995 4 68888888888 88999999999888777643   2433  2222221    11111  12


Q ss_pred             CCccEEEECCChh-hHHHHHHhhccCCEEEEEe
Q 037444          220 QGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      +.+|+|+....-. ....+.+.|+++|+++..-
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             CCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence            4799999876643 4457889999999988653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.67  E-value=0.0098  Score=53.73  Aligned_cols=84  Identities=14%  Similarity=0.081  Sum_probs=52.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCH---------------HHHH-HHHHHhCCCe-e--eeCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQL--VGQFAKLAGCYVVGSAGSK---------------EKVD-LLKNKFGFDD-A--FNYK  205 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~--ai~la~~~ga~V~~~~~~~---------------~~~~-~~~~~~g~~~-v--~~~~  205 (339)
                      ..+..|.++||+||++++|++  .+......|++|+++.++.               +..+ .++ +.|... .  .|-.
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCC
Confidence            445778999999999999998  4444445599999998753               2222 233 555432 2  2434


Q ss_pred             ChhhHHHHHHHhCC--CCccEEEECCCh
Q 037444          206 EEPDLDAALKRCFP--QGIDIYFENVGG  231 (339)
Q Consensus       206 ~~~~~~~~v~~~~~--g~~d~vid~~g~  231 (339)
                      +.++..+.+.++..  |++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 SNETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            43233333333322  479999998874

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.67  E-value=0.0083  Score=50.46  Aligned_cols=95  Identities=19%  Similarity=0.167  Sum_probs=65.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      +.++.+||-.|. |. |..++.+++ .|++|+++..++...+.+++.   .+..  +..... ++.+.   +..+.+|+|
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V  188 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL  188 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence            678999999984 43 777777766 577999999998877776632   2332  221111 33332   223479999


Q ss_pred             EECCCh----hhHHHHHHhhccCCEEEEEec
Q 037444          226 FENVGG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       226 id~~g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +...-.    ..+..+.++|+++|+++..+.
T Consensus       189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          189 VANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            976542    256778899999999988764

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.66  E-value=0.013  Score=54.35  Aligned_cols=81  Identities=17%  Similarity=0.210  Sum_probs=54.2

Q ss_pred             CCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHH-------HHHHHHHHhCCC-ee--eeCCChhhHHHHHH
Q 037444          149 PKKG--EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKE-------KVDLLKNKFGFD-DA--FNYKEEPDLDAALK  215 (339)
Q Consensus       149 ~~~g--~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~-------~~~~~~~~~g~~-~v--~~~~~~~~~~~~v~  215 (339)
                      ++++  .++||+||+|++|..+++.+...|+ +|+.+.++..       -.+.++ ..|.. .+  .|-.+.+.+...+.
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence            3455  8999999999999999988888899 8888887632       123333 55653 22  23344323444444


Q ss_pred             HhCC-CCccEEEECCC
Q 037444          216 RCFP-QGIDIYFENVG  230 (339)
Q Consensus       216 ~~~~-g~~d~vid~~g  230 (339)
                      ++.. +++|++|++.|
T Consensus       313 ~i~~~g~ld~vVh~AG  328 (496)
T 3mje_A          313 ELPEDAPLTAVFHSAG  328 (496)
T ss_dssp             TCCTTSCEEEEEECCC
T ss_pred             HHHHhCCCeEEEECCc
Confidence            4433 37999999887

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.66  E-value=0.011  Score=51.17  Aligned_cols=87  Identities=17%  Similarity=0.159  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|...++.++.+|.+|++..++.++ +.+. +.|+.. .      ++.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~-~------~l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKF-V------DLETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEE-C------CHHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCccc-c------CHHHHHh-----hCCEEEEecC
Confidence            5789999995 999999999999999999999988766 4555 677632 1      2333332     3799999887


Q ss_pred             hh-----hH-HHHHHhhccCCEEEEEec
Q 037444          231 GK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ..     .+ ...+..+++++.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            32     12 457788999999998876

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.65  E-value=0.014  Score=50.26  Aligned_cols=93  Identities=16%  Similarity=0.047  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++..  .++      ++ +.+.+.. .++|+||+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~------~~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF------SL-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE------CH-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee------eH-HHHHhhh-ccCCEEEE
Confidence            6789999997 9999999999999998 9999999988876666466652  222      12 1232222 26999999


Q ss_pred             CCChhhH------HHHHHhhccCCEEEEEec
Q 037444          228 NVGGKML------DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~------~~~~~~l~~~G~~v~~g~  252 (339)
                      |++....      .-....++++..++++..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            9985421      111245666667777654

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.64  E-value=0.0024  Score=51.70  Aligned_cols=144  Identities=17%  Similarity=0.198  Sum_probs=86.4

Q ss_pred             CCCCCEEEeccceeeEEE-ecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHH
Q 037444           91 YAKDDLVWGSTGWEEYSL-VTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVG  169 (339)
Q Consensus        91 ~~~Gd~V~~~g~~~~~~~-v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai  169 (339)
                      ++.|+.+.....|.+|.. .+... .+.+ +.+  +.+.....+.. ......+..  .+.++.+||-.|. |. |..+.
T Consensus         6 ~~~~~~~~~~p~w~~~~~~~~~~~-~~~~-~~~--~~f~~~~~~~~-~~~~~~l~~--~~~~~~~vLDiG~-G~-G~~~~   76 (205)
T 3grz_A            6 INLSRHLAIVPEWEDYQPVFKDQE-IIRL-DPG--LAFGTGNHQTT-QLAMLGIER--AMVKPLTVADVGT-GS-GILAI   76 (205)
T ss_dssp             EEEETTEEEEETTCCCCCSSTTCE-EEEE-SCC-------CCHHHH-HHHHHHHHH--HCSSCCEEEEETC-TT-SHHHH
T ss_pred             EEECCcEEEeccccccccCCCCce-eEEe-cCC--cccCCCCCccH-HHHHHHHHH--hccCCCEEEEECC-CC-CHHHH
Confidence            456777777777888876 56565 7777 655  33222211111 111122212  2678899999984 43 77777


Q ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHhCCCCccEEEECCChh----hHHHHHH
Q 037444          170 QFAKLAGC-YVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK----MLDAVLL  239 (339)
Q Consensus       170 ~la~~~ga-~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~----~~~~~~~  239 (339)
                      .+++. +. +|+++..+++..+.+++.   .+..  .++..+-. +       ...+.+|+|+......    .+..+.+
T Consensus        77 ~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~  147 (205)
T 3grz_A           77 AAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL-A-------DVDGKFDLIVANILAEILLDLIPQLDS  147 (205)
T ss_dssp             HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT-T-------TCCSCEEEEEEESCHHHHHHHGGGSGG
T ss_pred             HHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc-c-------cCCCCceEEEECCcHHHHHHHHHHHHH
Confidence            77764 55 999999999887777632   2432  22322221 1       1235899999866543    3456667


Q ss_pred             hhccCCEEEEEec
Q 037444          240 NMRLRGRIAVCGM  252 (339)
Q Consensus       240 ~l~~~G~~v~~g~  252 (339)
                      .|+++|+++....
T Consensus       148 ~L~~gG~l~~~~~  160 (205)
T 3grz_A          148 HLNEDGQVIFSGI  160 (205)
T ss_dssp             GEEEEEEEEEEEE
T ss_pred             hcCCCCEEEEEec
Confidence            8999999987543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=96.62  E-value=0.0091  Score=51.69  Aligned_cols=69  Identities=14%  Similarity=0.172  Sum_probs=40.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+    . .   ....|..+.+.+.+.+...   ++|+||++.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~---~~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K---FEQVNLLDSNAVHHIIHDF---QPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C---eEEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence            4689999999999999999888889999999976543    1 1   0011222211222333322   58999999873

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.62  E-value=0.003  Score=52.42  Aligned_cols=100  Identities=16%  Similarity=0.235  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCC-
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQ-  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g-  220 (339)
                      +...+.++++||-.|+ | .|..+..+++..+.+|+++..+++..+.+++.   .|...+ ..... +..   ..+..+ 
T Consensus        85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~-d~~---~~~~~~~  157 (235)
T 1jg1_A           85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILG-DGS---KGFPPKA  157 (235)
T ss_dssp             HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEES-CGG---GCCGGGC
T ss_pred             HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEEC-Ccc---cCCCCCC
Confidence            5557889999999994 4 79999999998778999999998887777632   343321 11111 221   111123 


Q ss_pred             CccEEEECCChh-hHHHHHHhhccCCEEEEEe
Q 037444          221 GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       221 ~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      ++|+|+.+..-. ....+.+.|+++|+++..-
T Consensus       158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            599999877643 4568889999999987653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.61  E-value=0.02  Score=49.62  Aligned_cols=97  Identities=16%  Similarity=0.179  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---HHHHHHHHHHhC----CC-eeeeCCChhhHHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS---KEKVDLLKNKFG----FD-DAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~---~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      -.+.++||+|+ |++|.+++..+...|+ +|+++.|+   .++.+.+.++++    .. .+++..+.+.+.+.+.     
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence            36789999997 9999999999999999 89999999   776665543443    21 2333332100122232     


Q ss_pred             CccEEEECCChhh--H-HH----HHHhhccCCEEEEEec
Q 037444          221 GIDIYFENVGGKM--L-DA----VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~g~~~--~-~~----~~~~l~~~G~~v~~g~  252 (339)
                      .+|+||+|++...  . ..    ....+.++..+.++-.
T Consensus       220 ~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY  258 (312)
T 3t4e_A          220 SADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECVY  258 (312)
T ss_dssp             HCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCC
T ss_pred             CceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEecc
Confidence            3899999987432  0 11    1245666666666543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=96.61  E-value=0.0064  Score=54.27  Aligned_cols=84  Identities=12%  Similarity=0.040  Sum_probs=53.2

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHHH----------------HHHHHHHhCCCe-ee--eCC
Q 037444          147 CSP-KKGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKEK----------------VDLLKNKFGFDD-AF--NYK  205 (339)
Q Consensus       147 ~~~-~~g~~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~~----------------~~~~~~~~g~~~-v~--~~~  205 (339)
                      ..+ ..+.++||+||++++|++++..+.. .|++|+++.++.+.                .+.++ +.|... .+  |-.
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence            444 5577889999999999998877777 99999998765321                12334 555432 22  333


Q ss_pred             ChhhHHHHHHHhC--CCCccEEEECCCh
Q 037444          206 EEPDLDAALKRCF--PQGIDIYFENVGG  231 (339)
Q Consensus       206 ~~~~~~~~v~~~~--~g~~d~vid~~g~  231 (339)
                      +.+.....+.++.  -|++|+++++.|.
T Consensus       120 d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            3313333333322  1579999999874

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.60  E-value=0.0091  Score=51.65  Aligned_cols=92  Identities=13%  Similarity=0.063  Sum_probs=60.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      .+|||+||+|.+|..+++.+...|.+|+++++++.+.+ +.   +.. ++..+-  . .+.+.+... ++|+||++.+..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~-~~~~Dl--~-~~~~~~~~~-~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYE-YRVSDY--T-LEDLINQLN-DVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCE-EEECCC--C-HHHHHHHTT-TCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceE-EEEccc--c-HHHHHHhhc-CCCEEEEccccC
Confidence            58999999999999999999999999999999854444 32   332 222221  3 455655554 799999998731


Q ss_pred             --------------hHHHHHHhhccC--CEEEEEecc
Q 037444          233 --------------MLDAVLLNMRLR--GRIAVCGMI  253 (339)
Q Consensus       233 --------------~~~~~~~~l~~~--G~~v~~g~~  253 (339)
                                    .....++.++..  .++|.+++.
T Consensus        74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence                          112344444443  478877753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.59  E-value=0.011  Score=54.74  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHhCCC-ee--eeCCChhhHHHHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK-------VDLLKNKFGFD-DA--FNYKEEPDLDAALKR  216 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~-------~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~  216 (339)
                      .++++.++||+||+|++|..+++.+...|+ +|+.+.++...       .+.++ ..|.. .+  .|-.+.+.+...+.+
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~  300 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG  300 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHH
Confidence            467889999999999999999888877899 59999987641       12333 45653 22  233443234444444


Q ss_pred             hCC-CCccEEEECCC
Q 037444          217 CFP-QGIDIYFENVG  230 (339)
Q Consensus       217 ~~~-g~~d~vid~~g  230 (339)
                      +.. +.+|+||++.|
T Consensus       301 i~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAA  315 (486)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             HHhcCCCcEEEECCc
Confidence            422 37899999988

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.56  E-value=0.0016  Score=57.15  Aligned_cols=78  Identities=13%  Similarity=0.139  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH---H-HHHHHHhC------CC-ee--eeCCChhhHHHHHHHhC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK---V-DLLKNKFG------FD-DA--FNYKEEPDLDAALKRCF  218 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~---~-~~~~~~~g------~~-~v--~~~~~~~~~~~~v~~~~  218 (339)
                      +.++||+|++|++|.++++.+...|++|+.+.++.++   . +.++ ..+      .. .+  .|-.+.+++.+.+.++.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            5689999999999999999998999988777654322   1 2222 221      21 22  34444323444444443


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                      .+++|++|++.|
T Consensus        81 ~g~iD~lVnnAG   92 (327)
T 1jtv_A           81 EGRVDVLVCNAG   92 (327)
T ss_dssp             TSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence            358999999886

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.56  E-value=0.013  Score=50.47  Aligned_cols=92  Identities=14%  Similarity=0.165  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-------HHHHHHHH--HhCCCee-eeCCChhhHHHHHHHhCCCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-------EKVDLLKN--KFGFDDA-FNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-------~~~~~~~~--~~g~~~v-~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +.+|+|+||+|.+|..+++.+...|.+|++++++.       ++.+.+++  ..+...+ .|..+.    +.+.+... +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~----~~l~~~~~-~   76 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH----ETLVKAIK-Q   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH----HHHHHHHh-C
Confidence            45799999999999999988888899999999886       55443330  2344321 233332    23333333 5


Q ss_pred             ccEEEECCChh---hHHHHHHhhcc-C--CEEE
Q 037444          222 IDIYFENVGGK---MLDAVLLNMRL-R--GRIA  248 (339)
Q Consensus       222 ~d~vid~~g~~---~~~~~~~~l~~-~--G~~v  248 (339)
                      +|+||++.+..   .....++.++. +  ++++
T Consensus        77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            99999999842   23344444443 2  4666

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.56  E-value=0.006  Score=51.66  Aligned_cols=96  Identities=17%  Similarity=0.055  Sum_probs=66.6

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +|++..-+...|.+...--.|.+++|.|+++.+|..+++++...||+|++.-+...                     ++.
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~  198 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLS  198 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHH
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHH
Confidence            45555555555644433358999999999777999999999999999887653211                     333


Q ss_pred             HHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          212 AALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      +.++     .+|+||.++|.+.+ ---++++++-.++++|...
T Consensus       199 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          199 LYTR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             HHHT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             HHhh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence            3332     48999999997532 1235678888888888643

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.56  E-value=0.007  Score=51.25  Aligned_cols=96  Identities=21%  Similarity=0.148  Sum_probs=66.0

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++...+..+|.+..---.|.+++|.|+++.+|..+++++...|++|++.-+...                     ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L  198 (285)
T 3l07_A          140 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------DL  198 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence            345555555555644333358999999998777999999999999999877643211                     33


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.++     .+|+||.++|.+.+ ---++++++-.++++|..
T Consensus       199 ~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          199 KSHTT-----KADILIVAVGKPNF-ITADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             HHHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             HHhcc-----cCCEEEECCCCCCC-CCHHHcCCCcEEEEeccc
Confidence            33332     48999999997532 123567888888888864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.55  E-value=0.025  Score=48.76  Aligned_cols=91  Identities=14%  Similarity=0.205  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHH--HhCCCeee--eCCChhhHHHHHHHhCCCCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-----KEKVDLLKN--KFGFDDAF--NYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-----~~~~~~~~~--~~g~~~v~--~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++     +++.+.+++  ..+. +++  |..+.    +.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~----~~l~~~~~-~~   77 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDDH----QRLVDALK-QV   77 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSCH----HHHHHHHT-TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCCH----HHHHHHHh-CC
Confidence            3579999999999999999888889999999987     445444431  2233 233  33332    23333333 59


Q ss_pred             cEEEECCChh-------hHHHHHHhhccCC---EEE
Q 037444          223 DIYFENVGGK-------MLDAVLLNMRLRG---RIA  248 (339)
Q Consensus       223 d~vid~~g~~-------~~~~~~~~l~~~G---~~v  248 (339)
                      |+||++.+..       .....++.++..|   ++|
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           78 DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            9999998732       2234445444433   676

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.55  E-value=0.026  Score=44.58  Aligned_cols=101  Identities=21%  Similarity=0.243  Sum_probs=68.5

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +...+.++.+||-.|+ |. |..+..+++.. .+|+++..+++..+.+++.   .+...-+..... ++.+.+...  +.
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~  100 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD  100 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence            5567889999999985 44 88888888766 8999999999887777632   343111111111 333322211  37


Q ss_pred             ccEEEECCC----hhhHHHHHHhhccCCEEEEEe
Q 037444          222 IDIYFENVG----GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       222 ~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+|+....    ...+..+.+.|+++|+++...
T Consensus       101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A          101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999997654    236778889999999988753

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.53  E-value=0.031  Score=50.50  Aligned_cols=96  Identities=17%  Similarity=0.251  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.+|+|.|. |.+|..+++.++..|..|+++..++++.+.++ +.|.. ++..+.. + .+.++...-..+|+||-+++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~-vi~GDat-~-~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMK-VFYGDAT-R-MDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCC-CEESCTT-C-HHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCe-EEEcCCC-C-HHHHHhcCCCccCEEEECCC
Confidence            3467999996 99999999999999999999999999999998 78865 3433321 1 22344432237999999999


Q ss_pred             hhh----HHHHHHhhccCCEEEEEe
Q 037444          231 GKM----LDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       231 ~~~----~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.    +....+.+.+..+++.-.
T Consensus        78 ~~~~n~~i~~~ar~~~p~~~Iiara  102 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPHLQIIARA  102 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence            752    233445555666766543

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.53  E-value=0.013  Score=50.81  Aligned_cols=100  Identities=11%  Similarity=0.063  Sum_probs=69.7

Q ss_pred             HhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHh
Q 037444          145 EVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~  217 (339)
                      +... ++++.+||-.|.  +.|..+..+++..|++|+++..+++..+.+++.   .|..   .++..+-. ++     ..
T Consensus       110 ~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~-----~~  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DT-----PF  181 (312)
T ss_dssp             TTSCCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----CC
T ss_pred             HHhccCCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cC-----CC
Confidence            4444 789999999984  568888999988899999999999887777632   3432   22222211 11     01


Q ss_pred             CCCCccEEEECCC------hhhHHHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVG------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .++.+|+|+....      ...+..+.+.|+++|+++....
T Consensus       182 ~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          182 DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            2348999987432      2478889999999999987764

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.53  E-value=0.0076  Score=56.17  Aligned_cols=78  Identities=17%  Similarity=0.226  Sum_probs=53.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHhCCC-ee--eeCCChhhHHHHHHHh
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK-------VDLLKNKFGFD-DA--FNYKEEPDLDAALKRC  217 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~-------~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~~  217 (339)
                      ++++.++||+||+|++|..+++.+...|+ +|+.+.++..+       .+.++ ..|.. .+  .|-.+.+.+.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence            56789999999999999999988888899 68888887631       12233 34542 22  233433133333333 


Q ss_pred             CCCCccEEEECCC
Q 037444          218 FPQGIDIYFENVG  230 (339)
Q Consensus       218 ~~g~~d~vid~~g  230 (339)
                        +.+|+||++.|
T Consensus       334 --~~ld~VVh~AG  344 (511)
T 2z5l_A          334 --YPPNAVFHTAG  344 (511)
T ss_dssp             --SCCSEEEECCC
T ss_pred             --CCCcEEEECCc
Confidence              57999999987

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.52  E-value=0.00081  Score=56.03  Aligned_cols=99  Identities=14%  Similarity=0.087  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .+.++||+||+|.+|..+++.+...|+  +|+++++++++.+... .-+. .++  |..+.    +.+.+... ++|++|
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~-~~~~~D~~d~----~~~~~~~~-~~d~vi   89 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNV-NQEVVDFEKL----DDYASAFQ-GHDVGF   89 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGC-EEEECCGGGG----GGGGGGGS-SCSEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCc-eEEecCcCCH----HHHHHHhc-CCCEEE
Confidence            357899999999999999998888899  9999998765432211 1112 122  22221    22333322 699999


Q ss_pred             ECCChhh---------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          227 ENVGGKM---------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       227 d~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      ++.|...               ....++.+++  .+++|.+++...+
T Consensus        90 ~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~  136 (242)
T 2bka_A           90 CCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGAD  136 (242)
T ss_dssp             ECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCC
T ss_pred             ECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCC
Confidence            9998421               1123333433  3689988875543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.52  E-value=0.01  Score=55.58  Aligned_cols=82  Identities=11%  Similarity=0.010  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE-eCCH-------------HH----HHHHHHHhCCC-ee--eeCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGS-AGSK-------------EK----VDLLKNKFGFD-DA--FNYK  205 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~-~~~~-------------~~----~~~~~~~~g~~-~v--~~~~  205 (339)
                      .++++.++||+||+|++|..+++.+...|++ |+.+ .++.             ++    .+.++ ..|.. .+  .|-.
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt  325 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT  325 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence            4678899999999999999998888788996 6666 6662             22    23333 45653 22  2334


Q ss_pred             ChhhHHHHHHHhCC-CCccEEEECCC
Q 037444          206 EEPDLDAALKRCFP-QGIDIYFENVG  230 (339)
Q Consensus       206 ~~~~~~~~v~~~~~-g~~d~vid~~g  230 (339)
                      +.+.+...+.++.. +.+|+||++.|
T Consensus       326 d~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          326 DAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             SHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            43234444444432 37999999987

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.52  E-value=0.021  Score=48.70  Aligned_cols=102  Identities=10%  Similarity=0.011  Sum_probs=69.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCC
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +.+...+.++.+||-+|.  +.|..+..+++..|++|+++..+++..+.+++.+   |...-+..... ++    ..+. 
T Consensus        56 ~~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-
T ss_pred             HHHHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-
Confidence            335567789999999984  4588889999888999999999999888777432   32111111111 22    1122 


Q ss_pred             CCccEEEEC-----CC----hhhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFEN-----VG----GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~-----~g----~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|+|+..     ++    ...+..+.+.|+++|+++....
T Consensus       128 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          128 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            579999875     22    1367888999999999987543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=96.49  E-value=0.016  Score=51.13  Aligned_cols=77  Identities=10%  Similarity=0.080  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----HHHHHHHHHhC----C-CeeeeCCChhhHHHHHHHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----EKVDLLKNKFG----F-DDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----~~~~~~~~~~g----~-~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.    ++.+.+.+.+.    . ..++..+-. + .+.+.+... +
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d-~~~~~~~~~-~  102 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIR-N-LDDCNNACA-G  102 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTT-S-HHHHHHHHT-T
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCC-C-HHHHHHHhc-C
Confidence            356899999999999999998888899999999864    23333331221    1 122322221 2 123333333 6


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+||++.+
T Consensus       103 ~d~vih~A~  111 (352)
T 1sb8_A          103 VDYVLHQAA  111 (352)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECCc
Confidence            999999988

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=96.49  E-value=0.0014  Score=57.44  Aligned_cols=77  Identities=6%  Similarity=-0.021  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++......+.+.+....++  |..+.+.+.+.+.+.   ++|+||++
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih~   95 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVHS   95 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEEC
Confidence            4678999999999999999988888999999998643221111022111222  333321233333332   69999999


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        96 A~   97 (330)
T 2pzm_A           96 AA   97 (330)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.48  E-value=0.021  Score=48.70  Aligned_cols=91  Identities=13%  Similarity=0.023  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      -.+.+++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++.   ..+.+..   ++       . ..+|+|
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~---~l-------~-~~aDiI  191 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE---QL-------K-QSYDVI  191 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG---GC-------C-SCEEEE
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH---Hh-------c-CCCCEE
Confidence            36889999997 8999999988888997 999999999887766545553   1233222   11       1 369999


Q ss_pred             EECCChhhHHH----HHHhhccCCEEEEEec
Q 037444          226 FENVGGKMLDA----VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       226 id~~g~~~~~~----~~~~l~~~G~~v~~g~  252 (339)
                      |+|++......    ....++++..++++..
T Consensus       192 InaTp~gm~~~~~~l~~~~l~~~~~V~DlvY  222 (281)
T 3o8q_A          192 INSTSASLDGELPAIDPVIFSSRSVCYDMMY  222 (281)
T ss_dssp             EECSCCCC----CSCCGGGEEEEEEEEESCC
T ss_pred             EEcCcCCCCCCCCCCCHHHhCcCCEEEEecC
Confidence            99997542211    1244555555555543

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.48  E-value=0.0094  Score=47.74  Aligned_cols=99  Identities=17%  Similarity=0.180  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCC-C--eeeeCCChhhHHHHHHHhC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FGF-D--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g~-~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ..++++++||-.|.  +.|..+..+++..+  .+|+++..+++..+.+++.   .|. .  .++..+-. +    +....
T Consensus        18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~----~~~~~   90 (197)
T 3eey_A           18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQ-N----MDKYI   90 (197)
T ss_dssp             HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGG-G----GGGTC
T ss_pred             hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH-H----Hhhhc
Confidence            45788999999884  44888899999864  5999999999887777632   233 1  22222211 1    11123


Q ss_pred             CCCccEEEECCCh----------------hhHHHHHHhhccCCEEEEEec
Q 037444          219 PQGIDIYFENVGG----------------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 ~g~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ++.+|+|+...+-                ..+..+.+.|+++|+++....
T Consensus        91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            3479999965421                368889999999999987654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=96.48  E-value=0.0081  Score=52.79  Aligned_cols=76  Identities=17%  Similarity=0.119  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH----------HHHHHHHHHhCC-Ceee--eCCChhhHHHHHHHhC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK----------EKVDLLKNKFGF-DDAF--NYKEEPDLDAALKRCF  218 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~----------~~~~~~~~~~g~-~~v~--~~~~~~~~~~~v~~~~  218 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++.          +..+.+.+..+. ..++  |..+.+.+.+.+.+. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            36899999999999999988888899999998632          333444311232 1222  333321233333221 


Q ss_pred             CCCccEEEECCC
Q 037444          219 PQGIDIYFENVG  230 (339)
Q Consensus       219 ~g~~d~vid~~g  230 (339)
                        ++|+||++.+
T Consensus        81 --~~d~vih~A~   90 (348)
T 1ek6_A           81 --SFMAVIHFAG   90 (348)
T ss_dssp             --CEEEEEECCS
T ss_pred             --CCCEEEECCC
Confidence              6999999987

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.46  E-value=0.019  Score=50.73  Aligned_cols=96  Identities=16%  Similarity=0.137  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHhCCCeee--e-CCChhhHHHHHHHhCCCCccEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV--DLLKNKFGFDDAF--N-YKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~--~~~~~~~g~~~v~--~-~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +.+|+|+||+|.+|..+++.+...|.+|++++++.++.  +.+. ......++  | ..+.    +.+.+... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~----~~l~~~~~-~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNV----PLMDTLFE-GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCH----HHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCH----HHHHHHHh-cCCEEE
Confidence            46799999999999999988888899999999876643  3333 22111233  3 3232    22333322 589999


Q ss_pred             ECCChh------hHHHHHHhhcc-C--CEEEEEecc
Q 037444          227 ENVGGK------MLDAVLLNMRL-R--GRIAVCGMI  253 (339)
Q Consensus       227 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~  253 (339)
                      .+.+..      .....++.++. +  +++|.+++.
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            877532      11334444433 3  588888764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.45  E-value=0.013  Score=53.02  Aligned_cols=93  Identities=14%  Similarity=0.047  Sum_probs=64.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCC-----Ce--eeeCCChhhHHHHHHHhCCCCcc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAG---CYVVGSAGSKEKVDLLKNKFGF-----DD--AFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~g---a~V~~~~~~~~~~~~~~~~~g~-----~~--v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      +|+|+|+ |++|..+++.+...|   .+|++..++.++.+.+.++++.     ..  .+|..+.+++.+.+.+.   ++|
T Consensus         3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence            7999998 999999998888777   4999999999887766545431     11  23333321344444332   689


Q ss_pred             EEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +||+|.+.. ....+..++..+-.++++
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             EEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            999999853 445566777777777765

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.45  E-value=0.015  Score=45.90  Aligned_cols=98  Identities=15%  Similarity=0.156  Sum_probs=66.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHhCCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ..++++++||=.|  .+.|..+..+++. +.+|+++..+++..+.+++.   .|..  .++..+.. +    +....++.
T Consensus        18 ~~~~~~~~vLDiG--cG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~-~----l~~~~~~~   89 (185)
T 3mti_A           18 EVLDDESIVVDAT--MGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHE-N----LDHYVREP   89 (185)
T ss_dssp             TTCCTTCEEEESC--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGG-G----GGGTCCSC
T ss_pred             HhCCCCCEEEEEc--CCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHH-H----HHhhccCC
Confidence            4678999998888  3568888888887 88999999999887777632   3432  23332111 1    22233347


Q ss_pred             ccEEEECCCh----------------hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVGG----------------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+|+...+.                ..+..+.+.|+++|+++.+..
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9999865321                145788899999999987654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.45  E-value=0.022  Score=52.34  Aligned_cols=94  Identities=16%  Similarity=0.164  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+.+|+|+|+ |++|.+++..+... |.+|+++.++.++.+.+.+..+... .++..+.+++.+.+.     ++|+||+|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL   95 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence            4568999997 99999998888777 6799999999888776652333321 233333212222222     59999999


Q ss_pred             CChh-hHHHHHHhhccCCEEEEE
Q 037444          229 VGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      ++.. .......++..+-.+++.
T Consensus        96 tp~~~~~~v~~a~l~~g~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTKTDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHTCEEEEC
T ss_pred             CchhhhHHHHHHHHhcCCEEEEe
Confidence            9964 333345567777777664

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.44  E-value=0.006  Score=51.11  Aligned_cols=41  Identities=24%  Similarity=0.336  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCHHHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS-AGSKEKVDL  191 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~-~~~~~~~~~  191 (339)
                      .+.++||+||++++|.++++.+...|++|+++ .++.++.+.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~   47 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEE   47 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHH
Confidence            57899999999999999999988999999886 444444433

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.44  E-value=0.027  Score=47.80  Aligned_cols=91  Identities=15%  Similarity=0.034  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC--CeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++.  ..++...   ++.       ...+|+||+
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~-------~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE-------GQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT-------TCCCSEEEE
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc-------ccCCCEEEE
Confidence            6889999997 9999999988888997 999999999987776656654  1223222   211       136999999


Q ss_pred             CCChhhHH----HHHHhhccCCEEEEEec
Q 037444          228 NVGGKMLD----AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~~----~~~~~l~~~G~~v~~g~  252 (339)
                      |++.....    -....++++..++++..
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~~~V~DlvY  216 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEAALAYELAY  216 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTCSEEEESSC
T ss_pred             CCCCCCCCCCCCCCHHHhCcCCEEEEeec
Confidence            98753211    12345677777666644

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.43  E-value=0.0031  Score=52.41  Aligned_cols=73  Identities=16%  Similarity=0.093  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhC-CCCccEEEECCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF-PQGIDIYFENVG  230 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~-~g~~d~vid~~g  230 (339)
                      +.++||+||+|++|..+++.+...|++|+++.++.+    .. ++- ....|-.+.+.+.+.+.+.. .+++|++|++.|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            568999999999999999888888999999998754    11 110 01123333323333343331 137999999887

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=96.42  E-value=0.0046  Score=54.36  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=67.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---C-----------CC--eeeeCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKF---G-----------FD--DAFNYKE  206 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~---g-----------~~--~v~~~~~  206 (339)
                      ....+.+|++||-.|. |. |..++.+++..|  .+|+++..+++..+.+++.+   |           ..  .++..+-
T Consensus        99 ~~l~~~~g~~VLDiG~-G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           99 SMMDINPGDTVLEAGS-GS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HhcCCCCCCEEEEeCC-Cc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4457899999999984 44 888888998876  69999999998877776322   1           11  2222222


Q ss_pred             hhhHHHHHHHhCCCCccEEEECCChh--hHHHHHHhhccCCEEEEEec
Q 037444          207 EPDLDAALKRCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       207 ~~~~~~~v~~~~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . +.   ...+..+.+|+|+-.....  .+..+.++|+++|+++.+..
T Consensus       177 ~-~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          177 S-GA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             T-CC---C-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             H-Hc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            1 11   1112223699999766543  68899999999999987643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.42  E-value=0.013  Score=50.39  Aligned_cols=74  Identities=18%  Similarity=0.099  Sum_probs=50.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHH--HHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKV--DLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~--~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      ..+|||+||+|.+|..+++.+...| .+|+++++++++.  +.+. ..+...+ .|..+.    +.+.+... ++|+||.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~   78 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ----VIMELALN-GAYATFI   78 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCH----HHHHHHHh-cCCEEEE
Confidence            4689999999999999998887778 8999999886543  2333 3454322 233332    23333333 5999999


Q ss_pred             CCCh
Q 037444          228 NVGG  231 (339)
Q Consensus       228 ~~g~  231 (339)
                      +.+.
T Consensus        79 ~a~~   82 (299)
T 2wm3_A           79 VTNY   82 (299)
T ss_dssp             CCCH
T ss_pred             eCCC
Confidence            9873

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.41  E-value=0.011  Score=50.27  Aligned_cols=98  Identities=7%  Similarity=0.048  Sum_probs=69.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh----CCCe--eeeCCChhhHHHHHHH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKF----GFDD--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~----g~~~--v~~~~~~~~~~~~v~~  216 (339)
                      ....++++++||-.|+  +.|..+..+++..  +.+|+++..+++..+.+++.+    |.+.  ++..    |+.+   .
T Consensus       104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~----d~~~---~  174 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS----DIAD---F  174 (275)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS----CTTT---C
T ss_pred             HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC----chhc---c
Confidence            5567889999999984  4788888888874  679999999998888777433    5332  2222    2211   1


Q ss_pred             hCCCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ...+.+|+|+.....  ..+..+.+.|+++|+++...
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            122379999986654  47889999999999998764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.41  E-value=0.024  Score=50.40  Aligned_cols=92  Identities=12%  Similarity=0.113  Sum_probs=65.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      .+|+|+|+ |.+|..+++.+.. ..+|.+..++.++.+.++ +......+|..+.    +.+.+... +.|+|++|++..
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~----~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNF----DKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCH----HHHHHHHT-TCSEEEECCCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCH----HHHHHHHh-CCCEEEEecCCc
Confidence            47999997 9999998887743 468999999988888776 4322223444433    23333322 589999999964


Q ss_pred             -hHHHHHHhhccCCEEEEEec
Q 037444          233 -MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       233 -~~~~~~~~l~~~G~~v~~g~  252 (339)
                       ...-+-.|+..+-.|+++..
T Consensus        89 ~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHTCEEEECCC
T ss_pred             ccchHHHHHHhcCcceEeeec
Confidence             55667778888889998754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=96.40  E-value=0.013  Score=50.88  Aligned_cols=75  Identities=11%  Similarity=0.166  Sum_probs=48.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      -++..+|||+||+|.+|..+++.+...|.+|+++.++... +    .++... ..|..+...+.+.+..   +++|+||+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence            3566789999999999999999888889999999987653 1    122211 1233332122222322   26999999


Q ss_pred             CCCh
Q 037444          228 NVGG  231 (339)
Q Consensus       228 ~~g~  231 (339)
                      +.+.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9873

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=96.39  E-value=0.014  Score=49.92  Aligned_cols=64  Identities=8%  Similarity=0.116  Sum_probs=44.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      -++..+|||+||+|.+|..+++.+...|.+|++++++.               .|..+.+.+.+.+...   ++|+||++
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~   70 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC   70 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence            35667999999999999999998888899999998751               1222221333333322   68999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .+
T Consensus        71 A~   72 (292)
T 1vl0_A           71 AA   72 (292)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.38  E-value=0.0064  Score=53.29  Aligned_cols=73  Identities=21%  Similarity=0.192  Sum_probs=49.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++..+.+.+. ..+.. ++..+-. + .+.+.+... ++|+||++.+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~-~~~~Dl~-d-~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPE-CRVAEML-D-HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCE-EEECCTT-C-HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeE-EEEecCC-C-HHHHHHHHc-CCCEEEECCc
Confidence            48999999999999999988889999999998876544333 22332 2322211 2 233444443 5999999987

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.38  E-value=0.011  Score=54.37  Aligned_cols=91  Identities=18%  Similarity=0.163  Sum_probs=67.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .-.|.+|.|.|. |.+|..+++.++.+|++|+++.++..+..... ..|.. +.      ++.+.+     ...|+|+.+
T Consensus       274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell-----~~aDiVi~~  339 (494)
T 3d64_A          274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAA-----DKADIFVTA  339 (494)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHH-----hcCCEEEEC
Confidence            357899999995 99999999999999999999999887643333 44542 11      222222     258999999


Q ss_pred             CChh-hH-HHHHHhhccCCEEEEEecc
Q 037444          229 VGGK-ML-DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       229 ~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (339)
                      ++.. .+ ...++.++++..++.++..
T Consensus       340 ~~t~~lI~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          340 TGNYHVINHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             SSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred             CCcccccCHHHHhhCCCCcEEEEcCCC
Confidence            8754 23 4678899999999988763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=96.35  E-value=0.0071  Score=53.72  Aligned_cols=36  Identities=17%  Similarity=0.276  Sum_probs=29.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++.++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            579999999999999998888889999999987653

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.33  E-value=0.013  Score=47.56  Aligned_cols=95  Identities=16%  Similarity=0.082  Sum_probs=67.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccE
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      ..+.++.+||-.|.  +.|..+..+++. |++|+++..+++..+.++ +.+...  ++..+-. ++      ...+.+|+
T Consensus        42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~d~~-~~------~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQDLF-DW------TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEECCTT-SC------CCSSCEEE
T ss_pred             hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEecccc-cC------CCCCceeE
Confidence            44778889999984  458888888877 889999999999888888 555332  2222221 11      22348999


Q ss_pred             EEECCC---------hhhHHHHHHhhccCCEEEEEec
Q 037444          225 YFENVG---------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       225 vid~~g---------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+....         ...+..+.+.|+++|+++....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            997543         1256788899999999987754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.33  E-value=0.0023  Score=56.17  Aligned_cols=100  Identities=14%  Similarity=0.116  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCeee--eCCChhhHHHHHHHhCCC-CccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQ-GIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g-~~d~vi  226 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.... +.+. .+.-..++  |..+.    +.+.+...+ .+|+||
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~----~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADH----ALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCH----HHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCH----HHHHHHHhccCCcEEE
Confidence            457899999999999999988888899999999864321 1111 11111222  33332    223332222 699999


Q ss_pred             ECCChh-h--------------HHHHHHhhcc-C-CEEEEEecccc
Q 037444          227 ENVGGK-M--------------LDAVLLNMRL-R-GRIAVCGMISQ  255 (339)
Q Consensus       227 d~~g~~-~--------------~~~~~~~l~~-~-G~~v~~g~~~~  255 (339)
                      ++.+.. .              ....++.+.+ + +++|.+++...
T Consensus        95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~  140 (333)
T 2q1w_A           95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALC  140 (333)
T ss_dssp             ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGG
T ss_pred             ECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHH
Confidence            998731 1              1123333333 3 68998876543

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.33  E-value=0.0088  Score=49.44  Aligned_cols=101  Identities=13%  Similarity=0.112  Sum_probs=68.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-C--eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGF-D--DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~-~--~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +...+++|++||=.|+  +.|..+..+|+..|-  +|+++..+++-.+.+++.... .  ..+..+.. + .+.. ....
T Consensus        71 ~~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~-p~~~-~~~~  145 (233)
T 4df3_A           71 IELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-F-PEKY-RHLV  145 (233)
T ss_dssp             SCCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-C-GGGG-TTTC
T ss_pred             hhcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-C-cccc-cccc
Confidence            3467899999999984  678899999998875  899999999988877733221 1  11222211 1 0011 1112


Q ss_pred             CCccEEEECCChh-----hHHHHHHhhccCCEEEEE
Q 037444          220 QGIDIYFENVGGK-----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 g~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  250 (339)
                      +.+|+||......     .+.++.+.|+++|+++..
T Consensus       146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            3789988755421     577888999999998865

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.32  E-value=0.0089  Score=50.61  Aligned_cols=97  Identities=18%  Similarity=0.083  Sum_probs=67.6

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++..-....|.+..---.|.+++|.|.++.+|..+++++...||+|++.-+...                     ++
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~---------------------~L  198 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR---------------------DL  198 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS---------------------CH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc---------------------CH
Confidence            345555555556644333358999999999778999999999999999988653211                     33


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.++     .+|+||.++|.+.+ ---++++++-.++++|...
T Consensus       199 ~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          199 ADHVS-----RADLVVVAAGKPGL-VKGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             HHHHH-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred             HHHhc-----cCCEEEECCCCCCC-CCHHHcCCCeEEEEecccc
Confidence            33343     38999999997532 1235678888889998743

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.32  E-value=0.006  Score=51.10  Aligned_cols=99  Identities=12%  Similarity=0.071  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHh
Q 037444          144 YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       144 ~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~  217 (339)
                      .....+.++.+||-.|.  +.|..+..+++..|++|+++..+++..+.+++.   .|..   .++..+-. ++.      
T Consensus        29 ~~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~------   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYV------   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCC------
T ss_pred             HHhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCC------
Confidence            35567889999999984  448889999998899999999999877777632   3432   22222221 110      


Q ss_pred             CCCCccEEEECCC-------hhhHHHHHHhhccCCEEEEEe
Q 037444          218 FPQGIDIYFENVG-------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       218 ~~g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .++.+|+|+....       ...+.++.+.|+++|+++...
T Consensus       100 ~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            1347999996321       125788899999999988754

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.31  E-value=0.029  Score=49.34  Aligned_cols=94  Identities=18%  Similarity=0.199  Sum_probs=61.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCC-----Chhh----------H-HHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYK-----EEPD----------L-DAA  213 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~-----~~~~----------~-~~~  213 (339)
                      -+|.+|.|.|. |.+|+.+++.++.+|++|++...+.++.+..+ ++|+..+ +..     +. |          + .+.
T Consensus       173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~~v-~~~ell~~~~-DIliP~A~~~~I~~~~  248 (355)
T 1c1d_A          173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAV-ALEDVLSTPC-DVFAPCAMGGVITTEV  248 (355)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-CGGGGGGCCC-SEEEECSCSCCBCHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCEEe-ChHHhhcCcc-ceecHhHHHhhcCHHH
Confidence            57899999994 99999999999999999998877766544454 6775322 100     00 0          0 111


Q ss_pred             HHHhCCCCccEEEECCChhhH-HHHHHhhccCCEEEEE
Q 037444          214 LKRCFPQGIDIYFENVGGKML-DAVLLNMRLRGRIAVC  250 (339)
Q Consensus       214 v~~~~~g~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  250 (339)
                      +..+   +.++|+++..++.. +++.+.|..+|.++.-
T Consensus       249 ~~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv~P  283 (355)
T 1c1d_A          249 ARTL---DCSVVAGAANNVIADEAASDILHARGILYAP  283 (355)
T ss_dssp             HHHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEECC
T ss_pred             HhhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEEEC
Confidence            1111   46777777776543 3667777777766543

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.31  E-value=0.013  Score=53.73  Aligned_cols=91  Identities=20%  Similarity=0.180  Sum_probs=67.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .-.|.+|.|.|. |.+|..+++.++.+|++|+++.++..+..... ..|.. +.      ++.+.+     ...|+|+-+
T Consensus       254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHH-----hcCCEEEEC
Confidence            457899999995 99999999999999999999999887653444 45542 11      222222     258999999


Q ss_pred             CChh-hH-HHHHHhhccCCEEEEEecc
Q 037444          229 VGGK-ML-DAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       229 ~g~~-~~-~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.. .+ ...++.++++..++.++..
T Consensus       320 ~~t~~lI~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             CChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence            7654 23 3677889999999988763

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.30  E-value=0.057  Score=43.72  Aligned_cols=88  Identities=11%  Similarity=0.042  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG-----FDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +|+|+|++|.+|...+..+...|.+|+++.+++++.+.+.+.++     .+  +..  . ++.+.+.     ++|+||.|
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~-----~~D~Vi~~   71 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAE-----ACDIAVLT   71 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHH-----HCSEEEEC
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHh-----cCCEEEEe
Confidence            68999978999999888888889999999999888776653444     11  111  1 4444443     38999999


Q ss_pred             CChhhHHHHHHhhc---cCCEEEEEe
Q 037444          229 VGGKMLDAVLLNMR---LRGRIAVCG  251 (339)
Q Consensus       229 ~g~~~~~~~~~~l~---~~G~~v~~g  251 (339)
                      +........+..+.   ++..++.+.
T Consensus        72 ~~~~~~~~~~~~l~~~~~~~~vi~~~   97 (212)
T 1jay_A           72 IPWEHAIDTARDLKNILREKIVVSPL   97 (212)
T ss_dssp             SCHHHHHHHHHHTHHHHTTSEEEECC
T ss_pred             CChhhHHHHHHHHHHHcCCCEEEEcC
Confidence            99765444443332   344455543

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.30  E-value=0.024  Score=48.58  Aligned_cols=97  Identities=10%  Similarity=0.025  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhCCCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      .+.++.+||-+|.  +.|..+..+++..|++|+++..++...+.+++.   .|..   .++..+-. ++     ...++.
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~  150 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----PCEDNS  150 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----SSCTTC
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-----CCCCCC
Confidence            7889999999984  578888889988899999999999877766632   3332   22222211 11     112247


Q ss_pred             ccEEEECCCh-------hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVGG-------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+|+....-       ..+.++.+.|+++|+++....
T Consensus       151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            9999975431       358889999999999987654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=96.30  E-value=0.016  Score=50.80  Aligned_cols=74  Identities=15%  Similarity=0.227  Sum_probs=47.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH--H---HHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK--E---KVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~--~---~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      +|||+||+|.+|..+++.+...|.+|++++++.  .   ..+.+. ..+-..++  |..+...+.+.+..   .++|+||
T Consensus         3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vi   78 (347)
T 1orr_A            3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK---YMPDSCF   78 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred             EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhc---cCCCEEE
Confidence            799999999999999998888999999998631  1   122232 22312223  33332123333322   1699999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      ++.+.
T Consensus        79 h~A~~   83 (347)
T 1orr_A           79 HLAGQ   83 (347)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99883

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=96.28  E-value=0.018  Score=49.50  Aligned_cols=75  Identities=20%  Similarity=0.247  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------HHHHHHHHH--HhCCCee-eeCCChhhHHHHHHHhCCCCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS------KEKVDLLKN--KFGFDDA-FNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~------~~~~~~~~~--~~g~~~v-~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++      +++.+.+++  ..|...+ .|..+.    +.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~----~~l~~~~~-~~   78 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH----ASLVEAVK-NV   78 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCH----HHHHHHHH-TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCH----HHHHHHHc-CC
Confidence            3579999999999999999888889999999987      344443330  2343221 234332    22333222 59


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+||++.+.
T Consensus        79 d~vi~~a~~   87 (308)
T 1qyc_A           79 DVVISTVGS   87 (308)
T ss_dssp             SEEEECCCG
T ss_pred             CEEEECCcc
Confidence            999999985

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.28  E-value=0.15  Score=44.73  Aligned_cols=88  Identities=15%  Similarity=0.232  Sum_probs=59.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-H-cCCEEEEE-eCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEEC
Q 037444          153 EYVYVSAASGAVGQLVGQFAK-L-AGCYVVGS-AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFEN  228 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~-~-~ga~V~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~  228 (339)
                      -+|.|+|. |.+|...++.++ . .+++++++ ++++++.+.+.+++|...+++     ++.+.    ... ++|+|+.|
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~----l~~~~~D~V~i~   78 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDM----IDTENIDAIFIV   78 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHH----HTTSCCSEEEEC
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHH----hcCCCCCEEEEe
Confidence            47999996 999998887776 4 47776654 566666665554677754432     33222    233 79999999


Q ss_pred             CChh-hHHHHHHhhccCCEEEEEe
Q 037444          229 VGGK-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      +... +.+.+..+|+.+ +-|.+.
T Consensus        79 tp~~~h~~~~~~al~~G-~~v~~e  101 (346)
T 3cea_A           79 APTPFHPEMTIYAMNAG-LNVFCE  101 (346)
T ss_dssp             SCGGGHHHHHHHHHHTT-CEEEEC
T ss_pred             CChHhHHHHHHHHHHCC-CEEEEc
Confidence            9974 777788888775 444453

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.28  E-value=0.013  Score=50.03  Aligned_cols=97  Identities=14%  Similarity=0.034  Sum_probs=66.1

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +|++...+...|.+..---.|.+++|.|+++.+|..+++++...|++|++.-+...+.+                   +.
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l~  205 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------MI  205 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------HH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------hh
Confidence            45555555556644433458999999998777999999999999999888764322211                   00


Q ss_pred             HHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          212 AALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +.++     .+|+||.++|.+.+ ---.+++++-.++++|..
T Consensus       206 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          206 DYLR-----TADIVIAAMGQPGY-VKGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHH-----TCSEEEECSCCTTC-BCGGGSCTTCEEEECCCE
T ss_pred             hhhc-----cCCEEEECCCCCCC-CcHHhcCCCcEEEEEecc
Confidence            2222     37999999996522 122557888888898864

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=96.25  E-value=0.018  Score=51.66  Aligned_cols=36  Identities=17%  Similarity=-0.002  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCHH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAK-LAGCYVVGSAGSKE  187 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~-~~ga~V~~~~~~~~  187 (339)
                      +.+|||+||+|.+|..+++.+. ..|++|++++++..
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~   38 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVG   38 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCc
Confidence            4589999999999999998887 89999999987643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.24  E-value=0.016  Score=48.99  Aligned_cols=86  Identities=14%  Similarity=0.128  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+++|+|+ |++|.+++..+...|.+|+++.|+.++.+.+. +++.. +....+.            ..+|+||+|++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l------------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK------------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS------------SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh------------ccCCEEEEcccC
Confidence            889999996 99999999999999999999999998888777 77742 3333221            159999999873


Q ss_pred             h-----hHH--HHHHhhccCCEEEEEec
Q 037444          232 K-----MLD--AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       232 ~-----~~~--~~~~~l~~~G~~v~~g~  252 (339)
                      .     .+.  .....++++..++++..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEGKLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence            2     121  22236777887777654

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.22  E-value=0.025  Score=46.83  Aligned_cols=94  Identities=13%  Similarity=0.043  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .++++.+||=+|.  +.|..+..+++. |++|+++..+++..+.++ +.  ..++..    +..+.+....++.+|+|+.
T Consensus        38 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~--~~~~~~----d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK--FNVVKS----DAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT--SEEECS----CHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh--cceeec----cHHHHhhhcCCCCeeEEEE
Confidence            3578899999984  567777777765 889999999999888887 33  222222    4333333444458999997


Q ss_pred             CC-----C----hhhHHHHHHhhccCCEEEEEe
Q 037444          228 NV-----G----GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       228 ~~-----g----~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ..     .    ...+.++.+.|+++|+++...
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            43     2    125778889999999988653

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.20  E-value=0.011  Score=48.51  Aligned_cols=75  Identities=17%  Similarity=0.184  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHH
Q 037444          151 KGEYVYVSAA----------------SGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAAL  214 (339)
Q Consensus       151 ~g~~vlI~ga----------------~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  214 (339)
                      .|.+|||+||                +|++|.++++.+...|++|+.+.++.. .+.   ..|. .+++.....++.+.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~-~~~dv~~~~~~~~~v   81 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFV-KRVDVMTALEMEAAV   81 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTE-EEEECCSHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCC-eEEccCcHHHHHHHH
Confidence            5789999999                689999999999999999999876531 110   1122 345554432444555


Q ss_pred             HHhCCCCccEEEECCCh
Q 037444          215 KRCFPQGIDIYFENVGG  231 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g~  231 (339)
                      .+.. +++|++|.+.|.
T Consensus        82 ~~~~-~~~Dili~~Aav   97 (226)
T 1u7z_A           82 NASV-QQQNIFIGCAAV   97 (226)
T ss_dssp             HHHG-GGCSEEEECCBC
T ss_pred             HHhc-CCCCEEEECCcc
Confidence            4433 369999999884

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.19  E-value=0.048  Score=44.48  Aligned_cols=78  Identities=9%  Similarity=-0.018  Sum_probs=56.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      +|+|.|+ |.+|..+++.+...|.+|+++.+++++.+.+.+..+.. ++..+.. + .+.+++..-.++|+++-+++.+.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~-~-~~~l~~a~i~~ad~vi~~~~~d~   77 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGS-H-KEILRDAEVSKNDVVVILTPRDE   77 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTT-S-HHHHHHHTCCTTCEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCC-C-HHHHHhcCcccCCEEEEecCCcH
Confidence            5899996 99999999999999999999999999888766355553 4433332 2 23344442237999999999764


Q ss_pred             HH
Q 037444          234 LD  235 (339)
Q Consensus       234 ~~  235 (339)
                      .+
T Consensus        78 ~n   79 (218)
T 3l4b_C           78 VN   79 (218)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=96.18  E-value=0.024  Score=49.09  Aligned_cols=96  Identities=11%  Similarity=0.071  Sum_probs=66.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .+||++|  ++.|..+..+++.. +.+|+++..+++-.+.+++.++..  .-+..... |..+.+.....+.||+||--.
T Consensus        91 ~rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~  167 (317)
T 3gjy_A           91 LRITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDV  167 (317)
T ss_dssp             CEEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECC
T ss_pred             CEEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECC
Confidence            3899999  56788888898865 779999999999889888666531  11111111 444455544345899998632


Q ss_pred             C-----------hhhHHHHHHhhccCCEEEEEe
Q 037444          230 G-----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       230 g-----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .           .+.+..+.++|+++|.++...
T Consensus       168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            1           135788999999999987543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=96.16  E-value=0.0031  Score=53.48  Aligned_cols=95  Identities=13%  Similarity=0.049  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +.+|||+||+|++|..+++.+...|++|+++++++.+..    ..+... ..|-.+.    +.+.+... ++|+||++.|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~----~~~~~~~~-~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA----NAVNAMVA-GCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH----HHHHHHHT-TCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH----HHHHHHHc-CCCEEEECCC
Confidence            468999999999999999888888999999998764322    111111 1233332    23333333 6999999987


Q ss_pred             hh---hHH-----------HHHHhhcc--CCEEEEEecccc
Q 037444          231 GK---MLD-----------AVLLNMRL--RGRIAVCGMISQ  255 (339)
Q Consensus       231 ~~---~~~-----------~~~~~l~~--~G~~v~~g~~~~  255 (339)
                      ..   .+.           ..++.+++  .+++|.+++...
T Consensus        74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~  114 (267)
T 3rft_A           74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT  114 (267)
T ss_dssp             CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred             CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence            31   221           22233333  368998876543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.16  E-value=0.013  Score=50.02  Aligned_cols=95  Identities=15%  Similarity=0.122  Sum_probs=64.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC--------CeeeeCCChhhHHHHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF----GF--------DDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~----g~--------~~v~~~~~~~~~~~~v~~  216 (339)
                      ..+.+||++|+  +.|..+..+++. +. +|+++..+++-.+.+++.+    +.        +.-+..... |..+.+..
T Consensus        74 ~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred             CCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence            45689999994  567778888887 65 9999999999888888555    21        111111112 44444444


Q ss_pred             hCCCCccEEEECCC-----------hhhHHHHHHhhccCCEEEEE
Q 037444          217 CFPQGIDIYFENVG-----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       217 ~~~g~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                        .+.+|+|+-...           ...+..+.+.|+++|.++..
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence              458999985332           23578889999999999865

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.15  E-value=0.0027  Score=53.06  Aligned_cols=76  Identities=14%  Similarity=0.096  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKL-AGCYVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~-~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      ++.++||+||++++|.++++.+.. .|++|+++.++++ ..+    .+- ....|-.+.+++.+.+..+..+++|++|++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cce-EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            467899999999999998866655 7889999887643 111    110 012244443244444433333489999999


Q ss_pred             CCh
Q 037444          229 VGG  231 (339)
Q Consensus       229 ~g~  231 (339)
                      .|.
T Consensus        78 Ag~   80 (244)
T 4e4y_A           78 AGI   80 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            883

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=96.15  E-value=0.0041  Score=54.61  Aligned_cols=71  Identities=14%  Similarity=0.116  Sum_probs=46.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeee--eCCC-hhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKE-EPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~-~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|||+||+|.+|..+++.+... |.+|++++++.++.+.+.+..+. .++  |..+ ...+.+.+.     ++|+||++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~-----~~d~vih~A   75 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHVK-----KCDVVLPLV   75 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCe-EEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence            6999999999999999888887 89999999887654322201111 222  2222 101222222     589999987


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      +
T Consensus        76 ~   76 (345)
T 2bll_A           76 A   76 (345)
T ss_dssp             C
T ss_pred             c
Confidence            6

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.14  E-value=0.027  Score=48.83  Aligned_cols=88  Identities=19%  Similarity=0.147  Sum_probs=65.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|.|+|. |.+|...++.++.+|.+|++..++.++. .+. ++|+.. .      ++.+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~-~------~l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKA-V------SLEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEE-C------CHHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCcee-c------CHHHHHh-----hCCEEEEec
Confidence            36789999995 9999999999999999999999887654 344 677642 1      2333333     379999988


Q ss_pred             Ch-h----hH-HHHHHhhccCCEEEEEec
Q 037444          230 GG-K----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~-~----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      .. +    .+ ...+..+++++.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            73 2    12 466788899888888765

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=96.14  E-value=0.021  Score=51.19  Aligned_cols=39  Identities=15%  Similarity=0.049  Sum_probs=31.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      ...+.+|||+||+|-+|..++..+...|.+|+++.+...
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~   46 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR   46 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            456789999999999999999888888999999987643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=96.13  E-value=0.041  Score=50.30  Aligned_cols=93  Identities=14%  Similarity=0.111  Sum_probs=60.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +.+|+|+| +|.+|.++++.+...|++|++..++.++.+.+.+.++....+  +..+.    +.+.+... ++|+|++|+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~----~~l~~~l~-~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD----AALDAEVA-KHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH----HHHHHHHT-TSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH----HHHHHHHc-CCcEEEECC
Confidence            56899998 699999999888888999999999988766554233321122  33322    12323222 699999999


Q ss_pred             Chh-hHHHHHHhhccCCEEEEE
Q 037444          230 GGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       230 g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +.. .......++.++-.++..
T Consensus        77 ~~~~~~~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           77 PYTFHATVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             C--CHHHHHHHHHHHTCEEEES
T ss_pred             ccccchHHHHHHHhCCCeEEEe
Confidence            853 333345666666666554

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.12  E-value=0.064  Score=46.53  Aligned_cols=90  Identities=11%  Similarity=0.072  Sum_probs=62.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|.|+|. |.+|...++.++..|.  +|++..+++++.+.++ +.|.......+.. ++  .+     ...|+||-|+.
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~~~~-~~--~~-----~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIA-KV--ED-----FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCTT-GG--GG-----GCCSEEEECSC
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcCCHH-HH--hh-----ccCCEEEEeCC
Confidence            68999995 9999999999999998  9999999999988888 7886321111111 10  11     25899999988


Q ss_pred             hhh----HHHHHHhhccCCEEEEEec
Q 037444          231 GKM----LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~~----~~~~~~~l~~~G~~v~~g~  252 (339)
                      ...    +.+....++++..++.++.
T Consensus       104 ~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCCcEEEECCC
Confidence            653    3344445666666666654

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.12  E-value=0.017  Score=50.65  Aligned_cols=88  Identities=16%  Similarity=0.197  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|.|+|- |.+|...++.++.+|.+|++..++.++ +.+. ++|+..    .   ++.+.+.     ..|+|+.++
T Consensus       163 l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~ell~-----~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQ----L---PLEEIWP-----LCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEE----C---CHHHHGG-----GCSEEEECC
T ss_pred             CCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----C---CHHHHHh-----cCCEEEEec
Confidence            36789999995 999999999999999999999987655 3455 677642    1   2222221     489999988


Q ss_pred             Chh-----hH-HHHHHhhccCCEEEEEec
Q 037444          230 GGK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ...     .+ ...+..+++++.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            742     12 467788999999888876

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.12  E-value=0.016  Score=49.45  Aligned_cols=95  Identities=16%  Similarity=0.127  Sum_probs=64.9

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      +|++.......|.+..---.|.+++|.|++..+|.-+++++...||+|++.-+..                    . ++.
T Consensus       145 ~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~  203 (301)
T 1a4i_A          145 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------------A-HLD  203 (301)
T ss_dssp             CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-SHH
T ss_pred             cCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------------c-cHH
Confidence            4444444444443322234789999999866799999999999999988764221                    1 444


Q ss_pred             HHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          212 AALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +.++     .+|+||.++|...+ -.-++++++..++++|..
T Consensus       204 ~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          204 EEVN-----KGDILVVATGQPEM-VKGEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             HHHT-----TCSEEEECCCCTTC-BCGGGSCTTCEEEECCCB
T ss_pred             HHhc-----cCCEEEECCCCccc-CCHHHcCCCcEEEEccCC
Confidence            4443     48999999997633 223457888899999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.11  E-value=0.02  Score=54.45  Aligned_cols=79  Identities=24%  Similarity=0.279  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HH-HHHHHHHHhCCCeeeeCCCh-hhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KE-KVDLLKNKFGFDDAFNYKEE-PDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~-~~~~~~~~~g~~~v~~~~~~-~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.+++|+||++++|.+.++.+...|++|++..+. .+ -.+.++ +.|...+....+. .+....+.+...  |++|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            46789999999999999999999999999998743 22 234444 4454322222211 022222222221  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus       400 VnNAG  404 (604)
T 2et6_A          400 VNNAG  404 (604)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99987

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=96.08  E-value=0.02  Score=49.57  Aligned_cols=91  Identities=13%  Similarity=0.101  Sum_probs=57.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHH--HHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLK--NKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~--~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++.. +.+.+.  +..|...+ .|..+.    +.+.+... ++|+||.+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~----~~l~~a~~-~~d~vi~~   86 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH----EKLVELMK-KVDVVISA   86 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TCSEEEEC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence            47999999999999999988888999999998764 333222  03454321 233332    23433333 59999999


Q ss_pred             CChh---hHHHHHHhhccC---CEEE
Q 037444          229 VGGK---MLDAVLLNMRLR---GRIA  248 (339)
Q Consensus       229 ~g~~---~~~~~~~~l~~~---G~~v  248 (339)
                      .+..   .....++.++..   +++|
T Consensus        87 a~~~~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           87 LAFPQILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred             CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence            9842   233444444432   4665

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.07  E-value=0.036  Score=48.04  Aligned_cols=92  Identities=12%  Similarity=0.092  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH------HHHHHHHH--HhCCCee-eeCCChhhHHHHHHHhCCCCc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK------EKVDLLKN--KFGFDDA-FNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~------~~~~~~~~--~~g~~~v-~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.      ++.+.+.+  ..+...+ .|..+.    +.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~----~~l~~a~~-~~   78 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH----EKMVSVLK-QV   78 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH----HHHHHHHc-CC
Confidence            35799999999999999998888899999999875      33333320  2344321 233332    23444333 59


Q ss_pred             cEEEECCChh---hHHHHHHhhccC---CEEE
Q 037444          223 DIYFENVGGK---MLDAVLLNMRLR---GRIA  248 (339)
Q Consensus       223 d~vid~~g~~---~~~~~~~~l~~~---G~~v  248 (339)
                      |+||++.+..   .....++.++..   +++|
T Consensus        79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           79 DIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             SEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            9999999842   233444444433   4666

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.07  E-value=0.017  Score=48.64  Aligned_cols=95  Identities=11%  Similarity=-0.008  Sum_probs=67.5

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++......+|.+..  -.|.+++|.|+++.+|..+++++...|++|++.-+..                    . ++
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------~-~L  187 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------K-DI  187 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CH
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------c-cH
Confidence            34555555555664444  6899999999977899999999999999998875321                    1 44


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .+.+++     +|+||.++|.+.+ ---.+++++..++++|...
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGF-LNREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTC-BCGGGCCTTCEEEECCCEE
T ss_pred             HHhhcc-----CCEEEECCCCCcc-ccHhhccCCcEEEEeccCc
Confidence            444544     7999999997522 1225578888888888743

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.06  E-value=0.05  Score=45.31  Aligned_cols=77  Identities=17%  Similarity=0.148  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|+|.|++|.+|..+++.+... +.++.++....+..+.+. ..+++-++|+..+....+.+......+.++|+.+.|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            6899999999999999988766 889887775544444443 3366777887776233344443333478888888873

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.06  E-value=0.032  Score=54.87  Aligned_cols=82  Identities=17%  Similarity=0.182  Sum_probs=55.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCHH---H----HHHHHHHhCCC-ee--eeCCChhhHHHHHHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAK-LAGC-YVVGSAGSKE---K----VDLLKNKFGFD-DA--FNYKEEPDLDAALKR  216 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~-~~ga-~V~~~~~~~~---~----~~~~~~~~g~~-~v--~~~~~~~~~~~~v~~  216 (339)
                      +.++.++||+|++|++|.++++.+. ..|+ +|+.++++..   +    .+.++ ..|.. .+  .|-.+.+++.+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence            3578899999999999999888776 7899 5888888732   1    23333 45653 22  244444245555555


Q ss_pred             hCCC-CccEEEECCCh
Q 037444          217 CFPQ-GIDIYFENVGG  231 (339)
Q Consensus       217 ~~~g-~~d~vid~~g~  231 (339)
                      +... .+|++|++.|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            5444 79999999873

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=96.04  E-value=0.0031  Score=54.77  Aligned_cols=36  Identities=11%  Similarity=0.135  Sum_probs=32.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            578999999999999999999888999999998754

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=96.04  E-value=0.023  Score=46.44  Aligned_cols=101  Identities=10%  Similarity=0.019  Sum_probs=63.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCC--
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~--  219 (339)
                      ....++.+||=+|  .+.|..++.+|+.+  +++|+++..+++..+.+++   ..|...-+..... +..+.+.....  
T Consensus        54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~~  130 (221)
T 3u81_A           54 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY  130 (221)
T ss_dssp             HHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTTS
T ss_pred             HHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHhc
Confidence            3445778999988  46788888898865  6799999999988777764   3454321222222 44343333332  


Q ss_pred             --CCccEEEECCChhhHH---HH---HHhhccCCEEEEE
Q 037444          220 --QGIDIYFENVGGKMLD---AV---LLNMRLRGRIAVC  250 (339)
Q Consensus       220 --g~~d~vid~~g~~~~~---~~---~~~l~~~G~~v~~  250 (339)
                        +.+|+||-......+.   ..   .+.|+++|.++.-
T Consensus       131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~  169 (221)
T 3u81_A          131 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLAD  169 (221)
T ss_dssp             CCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEES
T ss_pred             CCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEe
Confidence              4799998655432111   11   2789999998753

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.01  E-value=0.027  Score=47.08  Aligned_cols=102  Identities=10%  Similarity=0.092  Sum_probs=69.4

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHH
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALK  215 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~  215 (339)
                      ++.....+.++.+||-.|.  +.|..+..+++..+.+|+++..+++..+.+++.   .|..   .++..+-. ++.    
T Consensus        37 ~l~~l~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~----  109 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD-NLP----  109 (257)
T ss_dssp             HHTTSCCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCS----
T ss_pred             HHHHHhcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh-hCC----
Confidence            3433346788999999984  568999999999888999999999887776632   3432   22222211 110    


Q ss_pred             HhCCCCccEEEECC-----C-hhhHHHHHHhhccCCEEEEEe
Q 037444          216 RCFPQGIDIYFENV-----G-GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       216 ~~~~g~~d~vid~~-----g-~~~~~~~~~~l~~~G~~v~~g  251 (339)
                       ..++.+|+|+...     + ...+..+.+.|+++|+++...
T Consensus       110 -~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          110 -FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             -SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence             1224799998632     2 136788999999999998765

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.00  E-value=0.051  Score=44.43  Aligned_cols=101  Identities=15%  Similarity=0.106  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC------CEEEEEeCCHHHHHHHHHH---hC-----CC--eeeeCCChhhHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAG------CYVVGSAGSKEKVDLLKNK---FG-----FD--DAFNYKEEPDLD  211 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~g------a~V~~~~~~~~~~~~~~~~---~g-----~~--~v~~~~~~~~~~  211 (339)
                      .++++.+||-.|. |. |..+..+++..+      .+|+++..+++..+.+++.   .+     ..  .++..+....+.
T Consensus        77 ~~~~~~~VLdiG~-G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-GS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-TT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-CC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5789999999985 44 889999999876      5999999999887777632   23     21  223222210110


Q ss_pred             HHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEec
Q 037444          212 AALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +....  .+.+|+|+..... ..+..+.+.|+++|+++..-.
T Consensus       155 ~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          155 EEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             HHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            00011  2479999987764 466888999999999887643

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.00  E-value=0.043  Score=44.91  Aligned_cols=90  Identities=12%  Similarity=0.062  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCeeeeC--CChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKNKFGFDDAFNY--KEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~--~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .|.+|||.|+ |.+|...++.+...|++|++++.... ..+.+. +.+.-..+..  ... +        . .++|+||-
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~-~~~~i~~i~~~~~~~-d--------L-~~adLVIa   97 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWE-AKGQLRVKRKKVGEE-D--------L-LNVFFIVV   97 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH-HTTSCEEECSCCCGG-G--------S-SSCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH-HcCCcEEEECCCCHh-H--------h-CCCCEEEE
Confidence            5789999997 99999999999999999999986543 233333 2232222211  111 1        1 26999999


Q ss_pred             CCChhhHHHHHHhhccCCEEEEEec
Q 037444          228 NVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+.+.++..+...+..|..|....
T Consensus        98 AT~d~~~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A           98 ATNDQAVNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             CCCCTHHHHHHHHHSCTTCEEEC--
T ss_pred             CCCCHHHHHHHHHHHhCCCEEEEeC
Confidence            9998877777766666888876654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=95.98  E-value=0.022  Score=48.53  Aligned_cols=59  Identities=8%  Similarity=0.107  Sum_probs=42.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|.+|..+++.+...|.+|+++++..               .|..+.+.+.+.+...   ++|+||++.+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~   65 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAA   65 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCc
Confidence            799999999999999998888899999999721               1222221333333322   6899999887

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.97  E-value=0.018  Score=50.56  Aligned_cols=69  Identities=17%  Similarity=0.203  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .++.+|||+||+|.+|..+++.+...|.+|++++++..+       .+... ..|..+.    +.+.+... ++|+||.+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDG----QALSDAIM-GVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCH----HHHHHHHT-TCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCH----HHHHHHHh-CCCEEEEC
Confidence            456789999999999999999999999999999987653       12322 1233332    22333222 69999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .+
T Consensus        85 A~   86 (347)
T 4id9_A           85 GA   86 (347)
T ss_dssp             CC
T ss_pred             Cc
Confidence            86

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=95.96  E-value=0.023  Score=49.63  Aligned_cols=73  Identities=18%  Similarity=0.227  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----HHHHHHHHHHh-CC-Ceee--eCCChhhHHHHHHHhCCCCccEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS----KEKVDLLKNKF-GF-DDAF--NYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~----~~~~~~~~~~~-g~-~~v~--~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      +|||+||+|.+|..+++.+...|++|+++.+.    .+..+.+. .+ +. ..++  |..+.+.+.+.+..   .++|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~v   77 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHH-hhcCCcceEEEccCCCHHHHHHHhhc---cCCCEE
Confidence            69999999999999999888899999998642    22333333 22 32 1222  33332122233322   169999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.|
T Consensus        78 ih~A~   82 (338)
T 1udb_A           78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCc
Confidence            99987

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.95  E-value=0.04  Score=46.36  Aligned_cols=103  Identities=14%  Similarity=0.101  Sum_probs=68.9

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHH
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALK  215 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~  215 (339)
                      ++.....+.++.+||-+|.  +.|..+..+++..+++|+++..+++..+.+++.   .|..   .++..+-. ++.    
T Consensus        37 ~l~~l~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~----  109 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGC--GTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD-DLP----  109 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETC--TTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCC----
T ss_pred             HHHhcccCCCCCEEEEeCC--CCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh-hCC----
Confidence            4433334788999999984  568889999988666999999999887777632   3332   22222211 110    


Q ss_pred             HhCCCCccEEEECCC------hhhHHHHHHhhccCCEEEEEec
Q 037444          216 RCFPQGIDIYFENVG------GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       216 ~~~~g~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                       ...+.+|+|+....      ...+..+.+.|+++|+++....
T Consensus       110 -~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          110 -FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             -CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             -CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence             12247999996443      1367788899999999987653

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.95  E-value=0.03  Score=47.41  Aligned_cols=96  Identities=17%  Similarity=0.070  Sum_probs=66.6

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++.......|.+...--.|.+++|.|++..+|.-+.+++...|++|++..+..                    . ++
T Consensus       138 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L  196 (288)
T 1b0a_A          138 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-NL  196 (288)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-CH
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hH
Confidence            34554444555553433335789999999866789999999999999999875322                    1 44


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.+++     +|+||.++|...+ -.-++++++..++++|..
T Consensus       197 ~~~~~~-----ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          197 RHHVEN-----ADLLIVAVGKPGF-IPGDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             HHHHHH-----CSEEEECSCCTTC-BCTTTSCTTCEEEECCCE
T ss_pred             HHHhcc-----CCEEEECCCCcCc-CCHHHcCCCcEEEEccCC
Confidence            445543     8999999997632 222457888888898874

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.95  E-value=0.028  Score=48.80  Aligned_cols=97  Identities=12%  Similarity=0.063  Sum_probs=65.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC------CeeeeCCChhhHHHHHHHhCCCCc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGF------DDAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ..+.+||++|  ++.|..+..+++.. +.+|+++..+++-.+.+++.+..      +.-+..... |..+.+.. ..+.+
T Consensus       107 ~~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCc
Confidence            3567999998  46678888888876 46999999999988888854421      111121222 44444443 34589


Q ss_pred             cEEEECCC-----------hhhHHHHHHhhccCCEEEEE
Q 037444          223 DIYFENVG-----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       223 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      |+||.-..           ...+..+.++|+++|.++.-
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~  221 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ  221 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence            99985431           23577889999999999865

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=95.94  E-value=0.019  Score=47.30  Aligned_cols=101  Identities=13%  Similarity=0.141  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCC-Ce--eeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGF-DD--AFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~-~~--v~~~~~~~~~~~~v~~~~~g  220 (339)
                      +...++++++||-.|+ |. |..+..+++..| .+|+++..+++..+.+++.... ..  .+..+.. +.. ..... .+
T Consensus        68 ~~~~~~~~~~VLDlGc-G~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~-~~~-~~~~~-~~  142 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGA-SA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KPQ-EYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESC-CS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CGG-GGTTT-SC
T ss_pred             cccCCCCCCEEEEEcc-cC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCC-Ccc-ccccc-Cc
Confidence            3356778999999985 44 889999999886 5999999999887777633221 11  2222211 100 00011 14


Q ss_pred             CccEEEECCChh-----hHHHHHHhhccCCEEEEE
Q 037444          221 GIDIYFENVGGK-----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       221 ~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  250 (339)
                      .+|+|+......     .+..+.+.|+++|+++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            799999665432     477888999999999876

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.93  E-value=0.014  Score=49.77  Aligned_cols=91  Identities=9%  Similarity=0.170  Sum_probs=63.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++++.+.+. ..+.. ++..+-. ++.       -.++|+||++.+..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~~~D~~-d~~-------~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAE-PLLWPGE-EPS-------LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEE-EEESSSS-CCC-------CTTCCEEEECCCCB
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCe-EEEeccc-ccc-------cCCCCEEEECCCcc
Confidence            58999998 99999999998888999999999988877766 55543 2322222 311       23799999999731


Q ss_pred             -----hHHHHHHhhcc----CCEEEEEeccc
Q 037444          233 -----MLDAVLLNMRL----RGRIAVCGMIS  254 (339)
Q Consensus       233 -----~~~~~~~~l~~----~G~~v~~g~~~  254 (339)
                           .....++.++.    -.++|.+++..
T Consensus        75 ~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~  105 (286)
T 3ius_A           75 SGGDPVLAALGDQIAARAAQFRWVGYLSTTA  105 (286)
T ss_dssp             TTBCHHHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred             ccccHHHHHHHHHHHhhcCCceEEEEeecce
Confidence                 23344444433    26888877543

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.91  E-value=0.019  Score=48.47  Aligned_cols=102  Identities=16%  Similarity=0.204  Sum_probs=69.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHH
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKR  216 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~  216 (339)
                      +.+...+.++.+||-+|.  +.|..+..+++..|++|+++..+++..+.+++.   .|..   .++..+-. ++     .
T Consensus        53 l~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~  124 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-----P  124 (273)
T ss_dssp             HHHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-----C
T ss_pred             HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-----C
Confidence            335567889999999984  458888899988899999999999887777632   2332   22222211 11     0


Q ss_pred             hCCCCccEEEECCC-----h--hhHHHHHHhhccCCEEEEEec
Q 037444          217 CFPQGIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       217 ~~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ..++.+|+|+....     .  ..+..+.+.|+++|+++....
T Consensus       125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            12247999985322     1  267888899999999987654

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.91  E-value=0.037  Score=46.39  Aligned_cols=99  Identities=13%  Similarity=0.166  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC--eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD--DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +.....++.+||-.|.  +.|..+..+++.. .+|+++..+++..+.+++.   .|..  .++..+-. ++     ...+
T Consensus        31 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l-----~~~~  101 (260)
T 1vl5_A           31 QIAALKGNEEVLDVAT--GGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PFTD  101 (260)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CSCT
T ss_pred             HHhCCCCCCEEEEEeC--CCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hC-----CCCC
Confidence            4556788999999984  3677777777664 5999999999887777632   2322  22222221 11     1122


Q ss_pred             CCccEEEECCCh-------hhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFENVGG-------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|+|+....-       ..+.++.+.|+++|+++....
T Consensus       102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~  141 (260)
T 1vl5_A          102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  141 (260)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence            479999986442       367889999999999987644

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.91  E-value=0.32  Score=42.29  Aligned_cols=88  Identities=13%  Similarity=0.158  Sum_probs=56.1

Q ss_pred             EEEEEcCCchHHHHH-HHHHHHcCCEEEEE-eCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLV-GQFAKLAGCYVVGS-AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~a-i~la~~~ga~V~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|.|+|+ |.+|... +..++..+.+++++ .+++++.+.+.+++|...++  .   ++.+.+.   ...+|+|+.|+..
T Consensus         2 ~vgiiG~-G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGA-STIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVG---DPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESC-CHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHT---CTTCCEEEECSCG
T ss_pred             eEEEEcc-cHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhc---CCCCCEEEEeCCh
Confidence            6889996 9999875 54433378887755 55666666555477764332  1   3333221   1269999999996


Q ss_pred             h-hHHHHHHhhccCCEEEEEe
Q 037444          232 K-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       232 ~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      . +.+.+..+|..+ +-|.+.
T Consensus        73 ~~h~~~~~~al~~G-k~v~~e   92 (332)
T 2glx_A           73 ELHREQTLAAIRAG-KHVLCE   92 (332)
T ss_dssp             GGHHHHHHHHHHTT-CEEEEC
T ss_pred             hHhHHHHHHHHHCC-CeEEEe
Confidence            4 666777777765 444553

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.90  E-value=0.021  Score=49.41  Aligned_cols=97  Identities=15%  Similarity=0.047  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-------CC--eeeeCCChhhHHHHHHHhC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFG-------FD--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g-------~~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ..++.+||++|  ++.|..+..+++..+ .+|+++..+++-.+.+++.+.       ..  .++..    |..+.+....
T Consensus        93 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~~~~~~  166 (304)
T 3bwc_A           93 HPKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG----DGLAFVRQTP  166 (304)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHHHSSC
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC----cHHHHHHhcc
Confidence            35678999999  456777888887654 599999999988888774331       11  22222    4444343323


Q ss_pred             CCCccEEEECCC-----------hhhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVG-----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.+|+|+....           ...+..+.++|+++|.++...
T Consensus       167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             TTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            458999986432           245778899999999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=95.90  E-value=0.024  Score=49.49  Aligned_cols=37  Identities=24%  Similarity=0.219  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~   40 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT   40 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            4678999999999999999888889999999988765

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.87  E-value=0.043  Score=48.33  Aligned_cols=88  Identities=22%  Similarity=0.232  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|- |.+|..+++.++.+|.+|++..++.. .+.+. ..|...+    .  ++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENS-KERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHH-HHHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCC-HHHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence            4779999995 99999999999999999999997753 34455 6676421    1  34444433     799998876


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . +     .-...+..++++..+|.++.
T Consensus       225 lt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            2 2     12467788999999998874

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.86  E-value=0.016  Score=50.37  Aligned_cols=100  Identities=20%  Similarity=0.225  Sum_probs=68.1

Q ss_pred             HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCe--eeeCCChhhHHHHHHH
Q 037444          144 YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FGFDD--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       144 ~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~v~~  216 (339)
                      .+...++++++||-.|. |. |..+..+++..+  .+|+++..+++..+.+++.   .|...  ++..    +..+... 
T Consensus        68 ~~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~----d~~~~~~-  140 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG----DGYYGVP-  140 (317)
T ss_dssp             HHHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES----CGGGCCG-
T ss_pred             HHhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC----Chhhccc-
Confidence            35567899999999994 44 888888888753  4799999999888777633   24432  2222    2111111 


Q ss_pred             hCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  251 (339)
                       ..+.+|+|+....-. ....+.+.|+++|+++..-
T Consensus       141 -~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 -EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             -GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             -cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence             124799999876643 3467789999999988653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=95.85  E-value=0.034  Score=61.92  Aligned_cols=82  Identities=15%  Similarity=0.069  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHhCCC--e--e--eeCCChhhHHHHHHHh
Q 037444          150 KKGEYVYVSAASGA-VGQLVGQFAKLAGCYVVGSAGSKEK-----VDLLKNKFGFD--D--A--FNYKEEPDLDAALKRC  217 (339)
Q Consensus       150 ~~g~~vlI~ga~g~-~G~~ai~la~~~ga~V~~~~~~~~~-----~~~~~~~~g~~--~--v--~~~~~~~~~~~~v~~~  217 (339)
                      -.|.++||+||+++ +|.++++.+...|++|+++.++.++     .+.+.++++..  .  .  .|-.+.++....+.++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            47899999999999 9999999999999999999987655     34343355431  1  1  3444442455555555


Q ss_pred             CC------CCccEEEECCCh
Q 037444          218 FP------QGIDIYFENVGG  231 (339)
Q Consensus       218 ~~------g~~d~vid~~g~  231 (339)
                      ..      |++|+++++.|.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence            44      479999998874

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.83  E-value=0.015  Score=50.86  Aligned_cols=88  Identities=10%  Similarity=0.034  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|- |.+|..+++.++.+|.+|++..++..+.+... .+|...+       ++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQV-------ACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCceeC-------CHHHHHhh-----CCEEEEcCC
Confidence            5789999995 99999999999999999999998764444444 5664211       23333322     677777776


Q ss_pred             h-h----h-HHHHHHhhccCCEEEEEec
Q 037444          231 G-K----M-LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~----~-~~~~~~~l~~~G~~v~~g~  252 (339)
                      . +    . -...+..|+++..+|.++.
T Consensus       210 ~t~~t~~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence            2 1    1 2356677777777777664

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.83  E-value=0.0093  Score=53.26  Aligned_cols=72  Identities=17%  Similarity=0.190  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee--eCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF--NYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +.+|||+||+|.+|..+++.+...|.+|++++++..+..... ..+. .++  |..+.    +.+.+... ++|+||++.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v-~~~~~Dl~d~----~~~~~~~~-~~d~Vih~A  101 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCD-EFHLVDLRVM----ENCLKVTE-GVDHVFNLA  101 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCS-EEEECCTTSH----HHHHHHHT-TCSEEEECC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCc-eEEECCCCCH----HHHHHHhC-CCCEEEECc
Confidence            468999999999999999988888999999998765422111 1122 222  33332    22333322 699999998


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      +
T Consensus       102 ~  102 (379)
T 2c5a_A          102 A  102 (379)
T ss_dssp             C
T ss_pred             e
Confidence            7

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.81  E-value=0.09  Score=45.06  Aligned_cols=86  Identities=14%  Similarity=0.058  Sum_probs=59.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-  231 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-  231 (339)
                      .+|.|+|+ |.+|...+..+...|.+|++..+++++.+.+. +.|...   ..   +..+.+.     .+|+||.|+.. 
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHH-----HCSEEEECCSSH
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHh-----CCCEEEEECCCH
Confidence            37999995 99999988888888999999999998888777 556421   11   3333332     37899999984 


Q ss_pred             hhHHHHH-------HhhccCCEEEEEe
Q 037444          232 KMLDAVL-------LNMRLRGRIAVCG  251 (339)
Q Consensus       232 ~~~~~~~-------~~l~~~G~~v~~g  251 (339)
                      ..+...+       ..++++..++.++
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             HHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            4445444       4455666666553

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.80  E-value=0.017  Score=50.58  Aligned_cols=99  Identities=22%  Similarity=0.191  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC-CeeeeCCChhhHHHHHHHhCCCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKF-----GF-DDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~-----g~-~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ...+.+||.+|  ++.|..+..+++..+ .+|+++..+++-.+.+++.+     |. +.-+..... |..+.+.....+.
T Consensus       118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred             CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence            45678999998  466778888888764 59999999998888877433     11 111111112 4444444333358


Q ss_pred             ccEEEECCC-----------hhhHHHHHHhhccCCEEEEE
Q 037444          222 IDIYFENVG-----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       222 ~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+|+....           ...+..+.+.|+++|.++.-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            999985322           13677899999999999875

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.79  E-value=0.02  Score=50.51  Aligned_cols=90  Identities=22%  Similarity=0.212  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|.|+|. |.+|..+++.++.+|.+|++..++....+.+. +.|...+    .  ++.+.+.     ..|+|+-++
T Consensus       162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~  228 (351)
T 3jtm_A          162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLP-----KCDVIVINM  228 (351)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGG-----GCSEEEECS
T ss_pred             ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHh-----cCCEEEECC
Confidence            35789999995 99999999999999999999998765555555 6675322    1  3333332     378888877


Q ss_pred             Ch-h----h-HHHHHHhhccCCEEEEEec
Q 037444          230 GG-K----M-LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~-~----~-~~~~~~~l~~~G~~v~~g~  252 (339)
                      .. +    . -...+..|+++..+|.++.
T Consensus       229 Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          229 PLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            62 1    1 2466777888888877764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=95.78  E-value=0.051  Score=46.42  Aligned_cols=62  Identities=8%  Similarity=0.157  Sum_probs=42.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|.+|..+++.+. .|.+|++++++..       ..    ..|..+.+.+.+.+...   ++|+||++.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~~----~~D~~d~~~~~~~~~~~---~~d~vih~a~   63 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------cc----cccCCCHHHHHHHHHhc---CCCEEEECcc
Confidence            69999999999999998887 7999999997641       11    12333321233333221   6899999987

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.77  E-value=0.035  Score=46.75  Aligned_cols=99  Identities=12%  Similarity=0.027  Sum_probs=64.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ....+.++.+||=.|  .+.|..++.+++. |++|+++..+++-.+.+++..... ...+..+. +.  .......+.+|
T Consensus        39 ~~l~l~~g~~VLDlG--cGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~-~~--~~~~~~~~~fD  112 (261)
T 3iv6_A           39 FLENIVPGSTVAVIG--ASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDI-TA--EIPKELAGHFD  112 (261)
T ss_dssp             HTTTCCTTCEEEEEC--TTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCT-TS--CCCGGGTTCCS
T ss_pred             HhcCCCCcCEEEEEe--CcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeec-cc--ccccccCCCcc
Confidence            556788999999998  4678888888875 889999999999988888444322 11111111 10  00001124799


Q ss_pred             EEEECCC-----hh----hHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVG-----GK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g-----~~----~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+.+..     .+    .+....++| ++|+++..
T Consensus       113 ~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          113 FVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             EEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            9997532     11    566777788 99998754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=95.77  E-value=0.029  Score=49.74  Aligned_cols=81  Identities=15%  Similarity=0.049  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCHH----------------HHHHHHHHhCCC-eeeeCC--Chhh
Q 037444          150 KKGEYVYVSAASGAVGQLV-GQFAKLAGCYVVGSAGSKE----------------KVDLLKNKFGFD-DAFNYK--EEPD  209 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~a-i~la~~~ga~V~~~~~~~~----------------~~~~~~~~~g~~-~v~~~~--~~~~  209 (339)
                      ..+.++||+|+++++|++. +.+|...|+.|+++....+                -.+.++ +.|.. ..++.+  +.+.
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~-~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK-REGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HHTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH-HcCCCceeEeCCCCCHHH
Confidence            4578999999999999985 5666677999998875432                123444 56653 234332  2212


Q ss_pred             HHHHHHHhC--CCCccEEEECCCh
Q 037444          210 LDAALKRCF--PQGIDIYFENVGG  231 (339)
Q Consensus       210 ~~~~v~~~~--~g~~d~vid~~g~  231 (339)
                      ..+.+.++-  .|++|+++.+++.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeccc
Confidence            222222221  2589999998884

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.77  E-value=0.027  Score=47.46  Aligned_cols=97  Identities=12%  Similarity=0.199  Sum_probs=65.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCCCCc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA---GCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~---ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      +++|.+||=+|  .+.|..+..+++..   |++|+++..+++-.+.+++.+   +...-+..... |    +.++..+.+
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D----~~~~~~~~~  140 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-D----IRDIAIENA  140 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C----TTTCCCCSE
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-c----ccccccccc
Confidence            78999999998  46788888888864   679999999998887777433   33211111111 1    112222468


Q ss_pred             cEEEECCC-----h----hhHHHHHHhhccCCEEEEEec
Q 037444          223 DIYFENVG-----G----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       223 d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+|+....     .    ..+.+..+.|+|||+++....
T Consensus       141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            88876432     1    147788999999999987644

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.76  E-value=0.0075  Score=53.33  Aligned_cols=74  Identities=12%  Similarity=0.188  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhC-CCeeeeCCChhhHHHHHHHhCCC----CccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFG-FDDAFNYKEEPDLDAALKRCFPQ----GIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~v~~~~~g----~~d~  224 (339)
                      ++.+|||+||+|.+|..+++.+...| .+|+++.++..... .. .+. .....|..+    .+.+..+..+    ++|+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~----~~~~~~~~~~~~~~~~d~  118 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDK----EDFLIQIMAGEEFGDVEA  118 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEH----HHHHHHHHTTCCCSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCc----HHHHHHHHhhcccCCCCE
Confidence            35689999999999999999888889 89999998754321 11 221 111122222    2233333332    7999


Q ss_pred             EEECCC
Q 037444          225 YFENVG  230 (339)
Q Consensus       225 vid~~g  230 (339)
                      ||++.+
T Consensus       119 Vih~A~  124 (357)
T 2x6t_A          119 IFHEGA  124 (357)
T ss_dssp             EEECCS
T ss_pred             EEECCc
Confidence            999987

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.75  E-value=0.0036  Score=54.19  Aligned_cols=117  Identities=13%  Similarity=0.033  Sum_probs=70.9

Q ss_pred             cccCchhhhHHHHHHHh--------cC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCC
Q 037444          130 GILGMPGVTAYAGLYEV--------CS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGFD  199 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~--------~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~~  199 (339)
                      +-+|++...+...+.+.        .+ --.|.+++|.|++..+|..+++++...|++|+++.++..+. +... .++..
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~  224 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLN  224 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhh
Confidence            34565555566556442        12 24788999999855789999999999999999887653211 1111 22221


Q ss_pred             -eee---e-CCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          200 -DAF---N-YKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       200 -~v~---~-~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                       +..   . .+.. ++.+.+++     +|+||.++|.+.+--.-.+++++-.++++|..
T Consensus       225 ~~~~t~~~~t~~~-~L~e~l~~-----ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~  277 (320)
T 1edz_A          225 KHHVEDLGEYSED-LLKKCSLD-----SDVVITGVPSENYKFPTEYIKEGAVCINFACT  277 (320)
T ss_dssp             CCEEEEEEECCHH-HHHHHHHH-----CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             cccccccccccHh-HHHHHhcc-----CCEEEECCCCCcceeCHHHcCCCeEEEEcCCC
Confidence             111   0 1112 56666654     89999999976321112346777777788764

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.75  E-value=0.021  Score=46.95  Aligned_cols=99  Identities=11%  Similarity=0.040  Sum_probs=68.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHHHHhCCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +...+.++.+||-.|. | .|..+..+++.. .+|+++..+++..+.+++.+..   ..++..+..    +.+.  ..+.
T Consensus        64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~----~~~~--~~~~  134 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT----LGYE--EEKP  134 (231)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG----GCCG--GGCC
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcc----cccc--cCCC
Confidence            5567889999999984 4 488888888764 8999999999988888744322   122322211    1010  1247


Q ss_pred             ccEEEECCCh-hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVGG-KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+|+....- .....+.+.|+++|+++..-.
T Consensus       135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             EEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             ccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            9999987653 344678899999999887643

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.74  E-value=0.081  Score=44.93  Aligned_cols=88  Identities=11%  Similarity=0.105  Sum_probs=60.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g  230 (339)
                      +|.|+|+ |.+|.+.++.++..|.  +|++..+++++.+.++ +.|.......    +..+.+     . ..|+||.|+.
T Consensus         3 ~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-~~g~~~~~~~----~~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT----SIAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES----CGGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-HCCCcccccC----CHHHHh-----cCCCCEEEEcCC
Confidence            6899995 9999999999888887  9999999998888887 7776321111    111111     2 4899999998


Q ss_pred             hhhHH----HHHHhhccCCEEEEEec
Q 037444          231 GKMLD----AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~~~~----~~~~~l~~~G~~v~~g~  252 (339)
                      .....    .....++++..++.++.
T Consensus        72 ~~~~~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHHHHHhhCCCCcEEEECCC
Confidence            65333    33345566666665543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.72  E-value=0.054  Score=47.45  Aligned_cols=88  Identities=15%  Similarity=0.167  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|.|+|. |.+|...++.++..|.+|++..++.++ +... ++|...    .   ++.+.+.     ..|+|+.++
T Consensus       148 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~~~l~-----~aDvVil~v  212 (334)
T 2dbq_A          148 VYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAEF----K---PLEDLLR-----ESDFVVLAV  212 (334)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCEE----C---CHHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCccc----C---CHHHHHh-----hCCEEEECC
Confidence            35779999995 999999999999999999999988776 5555 566521    1   3333333     378998888


Q ss_pred             Chh-----hH-HHHHHhhccCCEEEEEec
Q 037444          230 GGK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ...     .+ ...+..++++..++.++.
T Consensus       213 p~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          213 PLTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            742     12 355677888888877653

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.72  E-value=0.043  Score=47.73  Aligned_cols=88  Identities=10%  Similarity=0.050  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      .|.+|.|+|. |.+|...++.++.+|.+|++..+ +.++ +... ++|+.. .   .  ++.+.+.     ..|+|+.++
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~-~---~--~l~ell~-----~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF-H---D--SLDSLLS-----VSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE-C---S--SHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE-c---C--CHHHHHh-----hCCEEEEec
Confidence            6789999995 99999999999999999999998 6655 3444 667632 1   1  3333333     378999888


Q ss_pred             Chh-----hH-HHHHHhhccCCEEEEEec
Q 037444          230 GGK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ...     .+ ...+..++++..++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            732     12 356678888888888765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=95.71  E-value=0.043  Score=46.20  Aligned_cols=66  Identities=17%  Similarity=0.227  Sum_probs=44.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|||+||+|.+|..+++.+. .|.+|++++++++. +  .   +  ...|..+.+.+.+.++..   ++|+||++.|.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~   67 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAM   67 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcc
Confidence            59999999999999988776 48999999987531 1  1   2  233444331333333322   69999999873

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.69  E-value=0.015  Score=48.15  Aligned_cols=99  Identities=7%  Similarity=-0.084  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--CeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--DDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .+++.+||=.|.  +.|..+..+++....+|+++..+++-.+.+++....  ..+ ..... ++.+.+..+.++.+|+|+
T Consensus        58 ~~~~~~vLDiGc--GtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~~-d~~~~~~~~~~~~fD~V~  133 (236)
T 1zx0_A           58 SSKGGRVLEVGF--GMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKV-IPLKG-LWEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECC--TTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEE-EEEES-CHHHHGGGSCTTCEEEEE
T ss_pred             CCCCCeEEEEec--cCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCe-EEEec-CHHHhhcccCCCceEEEE
Confidence            467889999984  467777777654444999999999988888743311  111 11111 333332233345899998


Q ss_pred             E-CCC----hh-------hHHHHHHhhccCCEEEEEe
Q 037444          227 E-NVG----GK-------MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       227 d-~~g----~~-------~~~~~~~~l~~~G~~v~~g  251 (339)
                      . +..    ..       .+.++.+.|+++|+++.+.
T Consensus       134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  170 (236)
T 1zx0_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence            7 222    11       2778899999999998764

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.67  E-value=0.025  Score=47.79  Aligned_cols=96  Identities=20%  Similarity=0.086  Sum_probs=65.4

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChh
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEP  208 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~  208 (339)
                      -+|++...+...|.+...--.|.+++|.|++..+|..+++++...  |++|++.-+..+                     
T Consensus       137 ~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~---------------------  195 (281)
T 2c2x_A          137 PLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTR---------------------  195 (281)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCS---------------------
T ss_pred             CCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchh---------------------
Confidence            345554455555544332347899999998667899999999988  899987643221                     


Q ss_pred             hHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          209 DLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       209 ~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      ++.+.++     .+|+||.++|.+.+ -.-++++++-.++++|..
T Consensus       196 ~L~~~~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          196 DLPALTR-----QADIVVAAVGVAHL-LTADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             CHHHHHT-----TCSEEEECSCCTTC-BCGGGSCTTCEEEECCEE
T ss_pred             HHHHHHh-----hCCEEEECCCCCcc-cCHHHcCCCcEEEEccCC
Confidence            3333332     48999999997643 223557888888888874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.66  E-value=0.018  Score=51.06  Aligned_cols=90  Identities=13%  Similarity=0.077  Sum_probs=62.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~-V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      -.|.+|.|+|. |.+|..+++.++.+|++ |++..++..+.+.+. ++|+..+   .   ++.+.+.     ..|+|+.+
T Consensus       162 l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~---~---~l~ell~-----~aDvV~l~  228 (364)
T 2j6i_A          162 IEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV---E---NIEELVA-----QADIVTVN  228 (364)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC---S---SHHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec---C---CHHHHHh-----cCCEEEEC
Confidence            36789999995 99999999999999997 999987765445555 6665321   1   3333332     37888888


Q ss_pred             CChh-----hH-HHHHHhhccCCEEEEEec
Q 037444          229 VGGK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       229 ~g~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      +...     .+ ...+..|++++.+|.++.
T Consensus       229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          229 APLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             CCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            7642     22 356677888877777764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=95.65  E-value=0.028  Score=51.92  Aligned_cols=40  Identities=10%  Similarity=0.057  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCHHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA---GCYVVGSAGSKEK  188 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~---ga~V~~~~~~~~~  188 (339)
                      ...+.+|||+||+|.+|..+++.+...   |.+|++++++.+.
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~  112 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD  112 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence            456789999999999999988776666   8999999987654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.65  E-value=0.017  Score=49.83  Aligned_cols=74  Identities=14%  Similarity=0.057  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +.+|||+||+|.+|..+++.+...  |.+|++++++..+.+...   +... ..|..+.+.+.+.+++.   ++|+||++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~   75 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLM   75 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEEC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEEC
Confidence            357999999999999998877776  789999998765433222   2321 12333321233333221   69999999


Q ss_pred             CCh
Q 037444          229 VGG  231 (339)
Q Consensus       229 ~g~  231 (339)
                      .+.
T Consensus        76 a~~   78 (312)
T 2yy7_A           76 AAL   78 (312)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            873

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.64  E-value=0.034  Score=45.89  Aligned_cols=101  Identities=12%  Similarity=0.113  Sum_probs=66.9

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhC
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      .+.......++.+||-.|.  +.|..+..+++. |. +|+++..+++..+.+++.....  .++..+-. ++     ...
T Consensus        34 ~l~~~~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~-----~~~  104 (243)
T 3bkw_A           34 ALRAMLPEVGGLRIVDLGC--GFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLD-KL-----HLP  104 (243)
T ss_dssp             HHHHHSCCCTTCEEEEETC--TTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGG-GC-----CCC
T ss_pred             HHHHhccccCCCEEEEEcC--cCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChh-hc-----cCC
Confidence            3445556678899999984  457777777776 77 9999999999888888333221  12222111 11     012


Q ss_pred             CCCccEEEECCC-------hhhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVG-------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.+|+|+....       ...+..+.+.|+++|+++...
T Consensus       105 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          105 QDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            347999997543       125778889999999998654

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.63  E-value=0.043  Score=45.86  Aligned_cols=94  Identities=6%  Similarity=0.042  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-CeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-DDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .+.++.+||-.|.  +.|..+..+++. |++|+++..+++..+.+++.+   .. ..++..+-. ++     ...++.+|
T Consensus        36 ~~~~~~~vLDiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~fD  106 (263)
T 2yqz_A           36 PKGEEPVFLELGV--GTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADAR-AI-----PLPDESVH  106 (263)
T ss_dssp             CSSSCCEEEEETC--TTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTT-SC-----CSCTTCEE
T ss_pred             CCCCCCEEEEeCC--cCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccc-cC-----CCCCCCee
Confidence            5778999999984  447777777775 889999999999888887443   11 122222221 11     01224799


Q ss_pred             EEEECCC-------hhhHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVG-------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g-------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+....       ...+.++.+.|+++|.++..
T Consensus       107 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          107 GVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            9997543       23678889999999998876

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.63  E-value=0.056  Score=48.45  Aligned_cols=115  Identities=17%  Similarity=0.167  Sum_probs=73.9

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HhCC--
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN----------KFGF--  198 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~----------~~g~--  198 (339)
                      +.......+..+.+..+++++++||=+|  .|.|..++++|+..|+ +|+++..+++-.+.+++          .+|.  
T Consensus       154 YGEt~~~~i~~il~~l~l~~gd~VLDLG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~  231 (438)
T 3uwp_A          154 YGETSFDLVAQMIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH  231 (438)
T ss_dssp             GGGTHHHHHHHHHHHHCCCTTCEEEEES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred             cCCCCHHHHHHHHHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            3333444455555778899999998887  6789999999998898 59999999865444431          2343  


Q ss_pred             C--eeeeCCChhhHHHHHHHhCCCCccEEEECC---Ch---hhHHHHHHhhccCCEEEEEec
Q 037444          199 D--DAFNYKEEPDLDAALKRCFPQGIDIYFENV---GG---KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       199 ~--~v~~~~~~~~~~~~v~~~~~g~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .  .++..+-. ++.  ..... +.+|+||-..   ..   ..+.+.++.|++||++|....
T Consensus       232 ~rVefi~GD~~-~lp--~~d~~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          232 AEYTLERGDFL-SEE--WRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             CEEEEEECCTT-SHH--HHHHH-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             CCeEEEECccc-CCc--ccccc-CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence            2  23333221 221  11100 2489998522   21   256778899999999997754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.62  E-value=0.016  Score=51.65  Aligned_cols=75  Identities=17%  Similarity=-0.027  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh--CC-CeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKF--GF-DDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~--g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .+.+|||+||+|.+|..+++.+...| .+|++++++..+..  . .+  +. ..++..+-. + .+.+.+... ++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-~l~~~~~v~~~~~Dl~-d-~~~l~~~~~-~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK--I-NVPDHPAVRFSETSIT-D-DALLASLQD-EYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG--G-GSCCCTTEEEECSCTT-C-HHHHHHCCS-CCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch--h-hccCCCceEEEECCCC-C-HHHHHHHhh-CCCEEE
Confidence            45789999999999999999888899 99999998754321  1 12  11 122222211 2 234554443 799999


Q ss_pred             ECCCh
Q 037444          227 ENVGG  231 (339)
Q Consensus       227 d~~g~  231 (339)
                      .+.+.
T Consensus       105 h~A~~  109 (377)
T 2q1s_A          105 HLATY  109 (377)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.61  E-value=0.025  Score=47.35  Aligned_cols=34  Identities=18%  Similarity=0.176  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~  186 (339)
                      +.+|+|.|+ |++|..+++.+...|. +++++.+..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            468999996 9999999999999998 888887765

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.60  E-value=0.092  Score=42.22  Aligned_cols=98  Identities=14%  Similarity=0.042  Sum_probs=63.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-----------------CeeeeCCCh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-----------------DDAFNYKEE  207 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-----------------~~v~~~~~~  207 (339)
                      ....+.++.+||-.|  .|.|..+..+++. |++|+++..|++-.+.+++..+.                 ..++..+-.
T Consensus        16 ~~l~~~~~~~vLD~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            334577899999998  4567778888876 89999999999988888755432                 112222211


Q ss_pred             hhHHHHHHHhCCCCccEEEECCC-----hh----hHHHHHHhhccCCEEEEE
Q 037444          208 PDLDAALKRCFPQGIDIYFENVG-----GK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~  250 (339)
                       ++...  .  .+.||+|++...     .+    .+.+..+.|+++|+++.+
T Consensus        93 -~l~~~--~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           93 -ALTAR--D--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             -SSTHH--H--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             -cCCcc--c--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence             21110  0  036999997322     11    467788999999994433

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.60  E-value=0.033  Score=47.59  Aligned_cols=96  Identities=15%  Similarity=0.181  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC-------C--eeeeCCChhhHHHHHHHhC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGF-------D--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~-------~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ..++.+||+.|  ++.|..+..+++.. +.+|+++..+++-.+.+++.+..       .  .++..    |..+.+... 
T Consensus        76 ~~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~----D~~~~l~~~-  148 (283)
T 2i7c_A           76 SKEPKNVLVVG--GGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE----DASKFLENV-  148 (283)
T ss_dssp             SSSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES----CHHHHHHHC-
T ss_pred             CCCCCeEEEEe--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC----ChHHHHHhC-
Confidence            34678999998  45677777888765 45999999999988888854431       1  12222    444444432 


Q ss_pred             CCCccEEEECC----C-------hhhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENV----G-------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~----g-------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+.+|+|+--.    +       ...+..+.++|+++|.++...
T Consensus       149 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          149 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            45899998622    1       135778899999999998653

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.60  E-value=0.1  Score=44.44  Aligned_cols=85  Identities=16%  Similarity=0.131  Sum_probs=56.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-  231 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-  231 (339)
                      .+|.|+|. |.+|...++.+...|.+|++..+++++.+.+. +.|+...   .   +..+.+.     ..|+||-|+.. 
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~~~~~~~-----~aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA---A---TPCEVVE-----SCPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC---S---SHHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec---C---CHHHHHh-----cCCEEEEEcCCH
Confidence            47999995 99999999888888999999999998888777 5565211   1   3333332     25777777773 


Q ss_pred             hhHHHHH-------HhhccCCEEEEE
Q 037444          232 KMLDAVL-------LNMRLRGRIAVC  250 (339)
Q Consensus       232 ~~~~~~~-------~~l~~~G~~v~~  250 (339)
                      ..+...+       ..++++..++.+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~~~vi~~   94 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEGRGYVDM   94 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred             HHHHHHHcCcchHhhcCCCCCEEEeC
Confidence            3444333       344455555544

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.60  E-value=0.02  Score=47.03  Aligned_cols=94  Identities=10%  Similarity=0.040  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhC-CCCccEEEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF-PQGIDIYFE  227 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~-~g~~d~vid  227 (339)
                      +.++.+||=.|.  +.|..+..+++. |++|+++..++...+.+++......++..+-. +   .+ ... .+.+|+|+.
T Consensus        46 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~---~~-~~~~~~~fD~v~~  117 (226)
T 3m33_A           46 LTPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGK-G---EL-PAGLGAPFGLIVS  117 (226)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSC-S---SC-CTTCCCCEEEEEE
T ss_pred             CCCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchh-h---cc-CCcCCCCEEEEEe
Confidence            468899999984  557788888877 88999999999988888833222233332221 0   00 012 347999998


Q ss_pred             CCCh-hhHHHHHHhhccCCEEEEE
Q 037444          228 NVGG-KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       228 ~~g~-~~~~~~~~~l~~~G~~v~~  250 (339)
                      ...- ..+..+.+.|+++|+++..
T Consensus       118 ~~~~~~~l~~~~~~LkpgG~l~~~  141 (226)
T 3m33_A          118 RRGPTSVILRLPELAAPDAHFLYV  141 (226)
T ss_dssp             ESCCSGGGGGHHHHEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHcCCCcEEEEe
Confidence            7553 5788999999999999844

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.59  E-value=0.043  Score=47.99  Aligned_cols=88  Identities=11%  Similarity=0.055  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|..+++.++..|.+|++..++.++.+.+. +.|...+       ++.+.+.     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHh-----hCCEEEEeCC
Confidence            4679999996 99999999999999999999997765545454 5554321       2222232     3788988886


Q ss_pred             hh-----hH-HHHHHhhccCCEEEEEec
Q 037444          231 GK-----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~-----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      ..     .+ ...+..++++..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            32     12 356677888777776654

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=95.58  E-value=0.016  Score=47.90  Aligned_cols=100  Identities=12%  Similarity=0.172  Sum_probs=66.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~  217 (339)
                      ....+.++.+||=.|  .+.|..++.+|+.. +.+|+++..+++..+.+++.   .|..   .++..+.. +   .+...
T Consensus        65 ~~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~---~~~~~  138 (232)
T 3ntv_A           65 QLIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNAL-E---QFENV  138 (232)
T ss_dssp             HHHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGG-G---CHHHH
T ss_pred             HHHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHH-H---HHHhh
Confidence            334456788999888  46788888888854 67999999999887777632   3432   23333222 2   22201


Q ss_pred             CCCCccEEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          218 FPQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       218 ~~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      ..+.||+||-....    ..+..+.+.|+++|.++.-
T Consensus       139 ~~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          139 NDKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             TTSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            13579999864432    2567888999999998763

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.58  E-value=0.067  Score=46.33  Aligned_cols=89  Identities=15%  Similarity=0.139  Sum_probs=59.1

Q ss_pred             CEEEEEcCCchHHHHHHHHH-H-HcCCEEEEEeCCH-HH--HHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFA-K-LAGCYVVGSAGSK-EK--VDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYF  226 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la-~-~~ga~V~~~~~~~-~~--~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vi  226 (339)
                      -+|.|+| +|.+|...+..+ + ..++++++++... ++  .+..+ ++|....  + .  ++. .+.+.+++ ++|+||
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~-~~g~~~~--~-~--~~e-~ll~~~~~~~iDvV~   76 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--Y-A--GVE-GLIKLPEFADIDFVF   76 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--S-S--HHH-HHHHSGGGGGEEEEE
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH-HcCCCcc--c-C--CHH-HHHhccCCCCCcEEE
Confidence            4799999 599999988877 4 3467776665433 43  34445 7776421  1 1  333 33333333 799999


Q ss_pred             ECCChh-hHHHHHHhhcc--CCEEEE
Q 037444          227 ENVGGK-MLDAVLLNMRL--RGRIAV  249 (339)
Q Consensus       227 d~~g~~-~~~~~~~~l~~--~G~~v~  249 (339)
                      +|++.. +.+.+..+++.  +.++++
T Consensus        77 ~atp~~~h~~~a~~al~a~~Gk~Vi~  102 (312)
T 1nvm_B           77 DATSASAHVQNEALLRQAKPGIRLID  102 (312)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             ECCChHHHHHHHHHHHHhCCCCEEEE
Confidence            999964 67788888888  777766

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=95.58  E-value=0.055  Score=47.25  Aligned_cols=35  Identities=3%  Similarity=0.019  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +.++||+|+++  ++|.++++.+...|++|+++++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            57899999875  999999988888999999888665

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.56  E-value=0.026  Score=50.52  Aligned_cols=89  Identities=15%  Similarity=0.009  Sum_probs=60.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|..+++.++.+|.+|++..++..+.+..+ .+|+..+   .   ++.+.+.     ..|+|+.++.
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~---~---~l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH---A---TREDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC---S---SHHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec---C---CHHHHHh-----cCCEEEEecC
Confidence            6789999995 99999999999999999999987754445455 6665321   1   2222221     3678887776


Q ss_pred             h-h----hH-HHHHHhhccCCEEEEEec
Q 037444          231 G-K----ML-DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~----~~-~~~~~~l~~~G~~v~~g~  252 (339)
                      . +    .+ ...+..|+++..+|.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            2 1    12 355667777777776654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=95.56  E-value=0.051  Score=57.55  Aligned_cols=80  Identities=23%  Similarity=0.262  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCch-HHHHHHHHHHHcCCEEEEE-eCCHHHHHHHH----HHh---CCC-ee--eeCCChhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGA-VGQLVGQFAKLAGCYVVGS-AGSKEKVDLLK----NKF---GFD-DA--FNYKEEPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~-~G~~ai~la~~~ga~V~~~-~~~~~~~~~~~----~~~---g~~-~v--~~~~~~~~~~~~v~~~~  218 (339)
                      .|.++||+||+++ +|.++++.+...|++|+++ .++.++.+.+.    +++   |.. .+  .|-.+..++...+.++.
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~  753 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY  753 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999998 9999999888899999998 46555443222    133   322 12  24444323444444331


Q ss_pred             -------CC-CccEEEECCC
Q 037444          219 -------PQ-GIDIYFENVG  230 (339)
Q Consensus       219 -------~g-~~d~vid~~g  230 (339)
                             -| .+|++|++.|
T Consensus       754 ~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          754 DTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             SCTTTTSCCCCCSEEEECCC
T ss_pred             HhccccccCCCCeEEEECCC
Confidence                   13 6999999987

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.55  E-value=0.032  Score=47.42  Aligned_cols=93  Identities=10%  Similarity=0.031  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC--C--eeeeCCChhhHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKF-----GF--D--DAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~-----g~--~--~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .+.+||+.|+  +.|..+..+++..+ .+|+++..+++-.+.+++.+     +.  .  +++..+    ..+.+.. ..+
T Consensus        75 ~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D----~~~~l~~-~~~  147 (275)
T 1iy9_A           75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD----GFMHIAK-SEN  147 (275)
T ss_dssp             SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC----SHHHHHT-CCS
T ss_pred             CCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc----HHHHHhh-CCC
Confidence            5689999994  56777888888766 59999999998888887433     22  1  233332    2233332 234


Q ss_pred             CccEEEECCC-----------hhhHHHHHHhhccCCEEEEE
Q 037444          221 GIDIYFENVG-----------GKMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       221 ~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  250 (339)
                      .+|+|+--..           .+.+..+.+.|+++|.++..
T Consensus       148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~  188 (275)
T 1iy9_A          148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (275)
T ss_dssp             CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            7999986442           24688999999999999875

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.53  E-value=0.093  Score=44.44  Aligned_cols=97  Identities=15%  Similarity=0.276  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccE
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      +...+.++.+||=.|.  +.|..+..+++ .+.+|+++..+++-.+.+++.+.-..++..+.. ++.      ..+.+|+
T Consensus        51 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~------~~~~fD~  120 (279)
T 3ccf_A           51 QLLNPQPGEFILDLGC--GTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNYPHLHFDVADAR-NFR------VDKPLDA  120 (279)
T ss_dssp             HHHCCCTTCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTT-TCC------CSSCEEE
T ss_pred             HHhCCCCCCEEEEecC--CCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhCCCCEEEECChh-hCC------cCCCcCE
Confidence            3345678899999984  56788888887 788999999999988888744322223322221 211      1247999


Q ss_pred             EEECCCh-------hhHHHHHHhhccCCEEEEEe
Q 037444          225 YFENVGG-------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       225 vid~~g~-------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      |+....-       ..+.++.+.|+++|+++...
T Consensus       121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9975431       26788999999999988653

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.53  E-value=0.015  Score=47.64  Aligned_cols=96  Identities=19%  Similarity=0.144  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hC-----CC--eeeeCCChhhHHHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FG-----FD--DAFNYKEEPDLDAALK  215 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g-----~~--~v~~~~~~~~~~~~v~  215 (339)
                      .++++++||-.|+ | .|..+..+++..|  .+|+++..+++..+.+++.   .+     ..  .++..+    ..... 
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d----~~~~~-  146 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD----GRMGY-  146 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC----GGGCC-
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC----cccCc-
Confidence            3789999999985 4 4888889998876  5999999999887777632   22     11  122221    11000 


Q ss_pred             HhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEe
Q 037444          216 RCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  251 (339)
                       ...+.+|+|+..... ..+..+.+.|+++|+++..-
T Consensus       147 -~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 -AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             -GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence             012379999877664 46678899999999988753

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.53  E-value=0.055  Score=44.31  Aligned_cols=95  Identities=16%  Similarity=0.111  Sum_probs=66.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHh---C-----C--CeeeeCCChhhH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAG-------CYVVGSAGSKEKVDLLKNKF---G-----F--DDAFNYKEEPDL  210 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~g-------a~V~~~~~~~~~~~~~~~~~---g-----~--~~v~~~~~~~~~  210 (339)
                      .++++++||-.|. | .|..+..+++..+       .+|+++..+++..+.+++.+   +     .  ..++..+.    
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~----  154 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG----  154 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG----
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc----
Confidence            5789999999984 4 4888889998776       49999999998777766322   1     1  12222221    


Q ss_pred             HHHHHHhCC-CCccEEEECCCh-hhHHHHHHhhccCCEEEEEe
Q 037444          211 DAALKRCFP-QGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       211 ~~~v~~~~~-g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+   .... +.+|+|+..... .....+.+.|+++|+++..-
T Consensus       155 ~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          155 RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            11   1112 479999987764 45678899999999988653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.52  E-value=0.01  Score=52.77  Aligned_cols=35  Identities=17%  Similarity=0.281  Sum_probs=31.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   59 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS   59 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence            47999999999999999988888999999998754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.52  E-value=0.062  Score=47.04  Aligned_cols=73  Identities=10%  Similarity=0.051  Sum_probs=46.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HHHHHHHHhCCC--eee--eCCChhhHHHHHHHhCCCCccE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKE--KVDLLKNKFGFD--DAF--NYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~--~~~~~~~~~g~~--~v~--~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      .+|||+||+|.+|..+++.+...  |.+|++++++..  ..+.+. .+...  .++  |..+.    +.+.+... ++|+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~----~~~~~~~~-~~d~   78 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADA----ELVDKLAA-KADA   78 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCH----HHHHHHHT-TCSE
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCH----HHHHHHhh-cCCE
Confidence            47999999999999998877776  889999987542  112222 22111  222  33332    23333332 4799


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      ||++.+.
T Consensus        79 vih~A~~   85 (348)
T 1oc2_A           79 IVHYAAE   85 (348)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999873

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=95.51  E-value=0.016  Score=51.63  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=31.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~   63 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS   63 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence            57999999999999999988888999999998754

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=95.51  E-value=0.031  Score=45.24  Aligned_cols=97  Identities=18%  Similarity=0.157  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ..++.+||-.|  .+.|..++.+++..  +.+|+++..+++..+.+++.   .+...-+..... +..+.+.. ..+ +|
T Consensus        54 ~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~-~~~-fD  128 (210)
T 3c3p_A           54 IKQPQLVVVPG--DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVG-DPLGIAAG-QRD-ID  128 (210)
T ss_dssp             HHCCSEEEEES--CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEES-CHHHHHTT-CCS-EE
T ss_pred             hhCCCEEEEEc--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEe-cHHHHhcc-CCC-CC
Confidence            34677899988  57888889999876  57999999999887777632   343211111111 33332222 234 99


Q ss_pred             EEEECCCh----hhHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVGG----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g~----~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+-....    ..+..+.+.|+++|.++.-
T Consensus       129 ~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~  159 (210)
T 3c3p_A          129 ILFMDCDVFNGADVLERMNRCLAKNALLIAV  159 (210)
T ss_dssp             EEEEETTTSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             EEEEcCChhhhHHHHHHHHHhcCCCeEEEEE
Confidence            99854321    3677888999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	8e-35
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	2e-33
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	1e-24
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	1e-21
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	1e-21
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	8e-19
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	6e-18
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	6e-18
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-17
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-17
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	1e-16
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-16
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	3e-16
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	1e-15
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	1e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-14
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	9e-14
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-11
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	7e-10
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	1e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-08
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	5e-08
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	5e-08
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	2e-07
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	2e-07
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	3e-05

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  123 bits (310), Expect = 8e-35
 Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 6/186 (3%)

Query: 125 LSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           LSY+ G +GMPG+T+  G+ E      G  + + VS A+GA G L GQ   L GC  V  
Sbjct: 2   LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
               ++  L        DA    +  ++   L+   P G+D+YF+NVGG + + V+  M 
Sbjct: 62  ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121

Query: 243 LRGRIAVCGMISQYNLE----KPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIP 298
               I +CG ISQYN +     P           + I  E F   +Y   +   +  +  
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181

Query: 299 AIREGK 304
             +EGK
Sbjct: 182 WFKEGK 187

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score =  119 bits (299), Expect = 2e-33
 Identities = 87/183 (47%), Positives = 114/183 (62%), Gaps = 3/183 (1%)

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           +PLS   G +GMPG+TAY GL EVC  K GE V VSAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1   LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
           AGS EK+  LK        FNYK    L+ ALK+  P G D YF+NVGG+ L+ VL  M+
Sbjct: 61  AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119

Query: 243 LRGRIAVCGMISQYNLE-KPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAI 300
             G+IA+CG IS YN   +     + E +I K++R+EGF+   +   +  K L  ++  +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179

Query: 301 REG 303
            EG
Sbjct: 180 LEG 182

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.0 bits (238), Expect = 1e-24
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 14/163 (8%)

Query: 10  NKRVILSN--YVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
            +RV+L++     G P   + ++   S+   + EG    V ++ LYLS DPYMR +M++ 
Sbjct: 5   IQRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQ---VQVRTLYLSVDPYMRCKMNED 61

Query: 68  DRPSFVDSFHP-------GELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQ- 119
               ++  +         G         Q  AK D V       +   +     L K+  
Sbjct: 62  TGTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDP 121

Query: 120 -HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAAS 161
              D      T   G+  +               + V +S  S
Sbjct: 122 QLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 87.8 bits (217), Expect = 1e-21
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 13/155 (8%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKL 67
           V  K   L  +  G P +SD ++ +    +++       VLL+ L+LS DPYMR    +L
Sbjct: 2   VKAKSWTLKKHFQGKPTQSDFELKT----VELPPLKNGEVLLEALFLSVDPYMRIASKRL 57

Query: 68  DRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQ---LLIKIQHTDVP 124
              + +        +        +    +V   +GW  + +        LL +     + 
Sbjct: 58  KEGAVMMGQ--QVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKKIQ 115

Query: 125 LSYYTGILGMPGVT-AYAGLYEVCSPKKGEYVYVS 158
              +    G   +  A+  +        G+ V  +
Sbjct: 116 YHEH-VTKGFENMPAAFIEMLNG--ANLGKAVVTA 147

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 88.5 bits (218), Expect = 1e-21
 Identities = 30/186 (16%), Positives = 55/186 (29%), Gaps = 18/186 (9%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYV-SAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           + +  +TAY  L        G+  ++ +  + AVG+   Q  KL     +     +  +D
Sbjct: 9   ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68

Query: 191 LL---KNKFGFDDAFNYKEE-----PDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMR 242
            +     + G        +              +       +    VGGK    +   + 
Sbjct: 69  EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128

Query: 243 LRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKF----LELVIP 298
             G +   G +S   +  P         I K     GF   +      +     L  +I 
Sbjct: 129 NNGLMLTYGGMSFQPVTIPTS-----LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183

Query: 299 AIREGK 304
              EGK
Sbjct: 184 WYEEGK 189

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 80.4 bits (197), Expect = 8e-19
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 11/177 (6%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           +LG    T Y         + G    V    G    ++          ++G   +K+K  
Sbjct: 8   LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67

Query: 191 LLKNKFGFDDAFNYKEEP-DLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
             K +FG  +  N ++    +   L      G+D  FE +G   +    L    +G    
Sbjct: 68  RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126

Query: 250 CGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL--YPKFLELVIPAIREGK 304
             +    +    E +      +      +G   G +  +   PK +          K
Sbjct: 127 VVVGVAAS---GEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEY----MSKK 176

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 78.1 bits (191), Expect = 6e-18
 Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 4/173 (2%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
             + G+T Y  L +    K  E     AA+G VG +  Q+AK  G  ++G+ G+ +K   
Sbjct: 9   SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
              K G     NY+EE  ++   +    + + + +++VG    +  L  ++ RG +   G
Sbjct: 69  AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127

Query: 252 MISQYNLEKPEGVHNLE-QLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREG 303
             S        G+ N +  L   R  L+G++         +    +   I  G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 78.1 bits (191), Expect = 6e-18
 Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 11/177 (6%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           ++G    T Y    +V    +G    V    G    ++          ++G   +K+K  
Sbjct: 8   LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67

Query: 191 LLKNKFGFDDAFNYKEEPD-LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
             K   G  +  N ++    +   L      G+D  FE +G        L+         
Sbjct: 68  KAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVS 126

Query: 250 CGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL--YPKFLELVIPAIREGK 304
             +         + +     L+      +G + G +      PK +          K
Sbjct: 127 VIV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADF----MAKK 176

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 76.9 bits (188), Expect = 1e-17
 Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 11/151 (7%)

Query: 133 GMPGVTAYAGLY---EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV 189
           G  G TA   ++   +     +   V V+ A+G VG +        G  VV S G++E  
Sbjct: 2   GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61

Query: 190 DLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
           D L  + G  +  + ++  D     K    Q      + VGGK L ++L  ++  G +AV
Sbjct: 62  DYL-KQLGASEVISREDVYDGTL--KALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118

Query: 250 CGMISQYNLEKPEGVHNLEQLIGKRIRLEGF 280
            G+     +        +   I + + L G 
Sbjct: 119 SGLTGGGEVPAT-----VYPFILRGVSLLGI 144

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 77.0 bits (188), Expect = 2e-17
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 10/177 (5%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
            G+  +TA+  L EV     GE V + +A+G VG      AK      + +    +    
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAK-MIGARIYTTAGSDAKRE 64

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
           + ++ G +   + +     D  L+     G+D+   ++ G+ +   +  +   GR    G
Sbjct: 65  MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124

Query: 252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYP----KFLELVIPAIREGK 304
               Y              + K              L P    + L+ ++  + +GK
Sbjct: 125 KKDVYADASLGL-----AALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGK 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 74.5 bits (182), Expect = 1e-16
 Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 123 VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS 182
           VP+    G LG    T                     A GAVG      AK+ G  ++ +
Sbjct: 1   VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58

Query: 183 AGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNM 241
               E    L  + G     N K + D  AA+K     G++   E+ G   +L   +  +
Sbjct: 59  VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117

Query: 242 RLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY--HLYPKFLELVIPA 299
            + G+IAV G        +     ++  L+     + G + G        P+ + L    
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGSPKKFIPELVRL---- 169

Query: 300 IREGK 304
            ++GK
Sbjct: 170 YQQGK 174

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 73.5 bits (179), Expect = 3e-16
 Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 12/177 (6%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           +LG    T +         + G    V          V          ++    + +K +
Sbjct: 8   LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67

Query: 191 LLKNKFGFDDAFNYKEEPDL-DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
             K  FG  D  N  +  +     L +    G+D   E VG   +    L   L+G    
Sbjct: 68  KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126

Query: 250 CGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL--YPKFLELVIPAIREGK 304
             +      +           +      +G + G +      PK ++       + K
Sbjct: 127 VLVGWTDLHDVA----TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKA----YLDKK 175

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 9/170 (5%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           +    G TAY    E      G+ V +  A G +G      A+  G   V          
Sbjct: 8   MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66

Query: 191 LLKNKFGFDDAFNYKE---EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGR 246
            L  + G D   N +E   E    A +     +G D   E  G  + L      +R  G 
Sbjct: 67  KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126

Query: 247 IAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELV 296
            +V G+      + P      E L+ K    +G    D  H + K + + 
Sbjct: 127 YSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSIT 172

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 71.8 bits (175), Expect = 1e-15
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 13/153 (8%)

Query: 131 ILGMPGVTAYAGLY---EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 187
           I+G  G TA   +    +     +   + V+ ASG VG          G  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 188 KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 247
             + LK   G        E  +     K+ +        + VG K+L  VL  M   G +
Sbjct: 68  THEYLK-SLGASRVLPRDEFAESRPLEKQVW----AGAIDTVGDKVLAKVLAQMNYGGCV 122

Query: 248 AVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF 280
           A CG+   +          +   I + +RL+G 
Sbjct: 123 AACGLAGGFT-----LPTTVMPFILRNVRLQGV 150

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 11/152 (7%)

Query: 131 ILGMPGVTAYAGLY---EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 187
            +G  G TA   ++   E     +   V V+ A+G VG L        G  V  S G   
Sbjct: 8   AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67

Query: 188 KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRI 247
           + D L+             E  +   ++    Q      + VGG+ L  VL  MR  G +
Sbjct: 68  EHDYLRV---LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124

Query: 248 AVCGMISQYNLEKPEGVHNLEQLIGKRIRLEG 279
           AV G+     +        +   I + + L G
Sbjct: 125 AVSGLTGGAEVPT-----TVHPFILRGVSLLG 151

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 66.9 bits (162), Expect = 5e-14
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 14/174 (8%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L   G+TAY  + +                G +G +  Q  K+     V +   KE+   
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNM-RLRGRIAVC 250
           L  + G D   + + +P +   ++    +G+++  + VG +        +    GR+ + 
Sbjct: 72  LAERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130

Query: 251 GMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGK 304
           G   +             ++I   +  EG L G+Y  L  + + L      +GK
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGNYVEL-HELVTLA----LQGK 172

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (160), Expect = 9e-14
 Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 9/173 (5%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           +G+P  TAY  L      K GE V V  ASG VG    Q A+  G  ++G+AG++E   +
Sbjct: 9   IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 68

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
              + G  + FN++E   +D   K    +GIDI  E +    L   L  +   GR+ V G
Sbjct: 69  -VLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127

Query: 252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY-HLYPKFLELVIPAIREG 303
                 +       N    + K   + G          + ++   +   +  G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 60.6 bits (146), Expect = 1e-11
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 14/178 (7%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           ++G    T Y           G    V    G VG       K AG   +   G+ +   
Sbjct: 7   LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65

Query: 191 LLKNKFGFDDAFNYKEEPD-LDAALKRCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRI 247
               + G  +  N K+    +   +      G+D   E  G    M++A+       G  
Sbjct: 66  PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125

Query: 248 AVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-YHLYPKFLELVIPAIREGK 304
            V G+    +  +   +  L  L G+ ++  G + G +      + ++       + K
Sbjct: 126 VVLGL---ASPNERLPLDPLLLLTGRSLK--GSVFGGFKGEEVSRLVDDY----MKKK 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 55.3 bits (132), Expect = 7e-10
 Identities = 31/166 (18%), Positives = 52/166 (31%), Gaps = 5/166 (3%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           +     T + G  E+   + G  V V      VG +    AKL G   +   GS+     
Sbjct: 9   ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM-LDAVLLNMRLRGRIAVC 250
               +G  D  NYK     D  +K    +G+D      GG   L   +  ++  G I+  
Sbjct: 67  AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 126

Query: 251 GMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELV 296
                   +                 ++G L         +  ++V
Sbjct: 127 NYHGSG--DALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLRDMV 170

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 52.3 bits (125), Expect = 1e-09
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 131 ILGMPGVTAYAGLYEV---CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE 187
           I+G  G TA   +  +       +   + V+ ASG VG          G  VV  +G + 
Sbjct: 8   IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67

Query: 188 KVDLLKN 194
             + LK+
Sbjct: 68  THEYLKS 74

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 50.7 bits (120), Expect = 2e-08
 Identities = 24/177 (13%), Positives = 53/177 (29%), Gaps = 13/177 (7%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           ++G    + Y           G    V    G VG       K+AG   + +     +  
Sbjct: 8   LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66

Query: 191 LLKNKFGFDDAFNYKEEPD-LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAV 249
                 G  D  N +E    +   +      G+D   +  G        ++  + G  + 
Sbjct: 67  PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126

Query: 250 CGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL--YPKFLELVIPAIREGK 304
             + ++ +         ++ ++G+ I   G   G +  +   P  +       +  K
Sbjct: 127 TVVGAKVDEMTI---PTVDVILGRSIN--GTFFGGWKSVDSVPNLVSDY----KNKK 174

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 50.2 bits (119), Expect = 5e-08
 Identities = 35/163 (21%), Positives = 53/163 (32%), Gaps = 21/163 (12%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
            L     T Y G         G  VYV+ A G VG      A+L G  VV          
Sbjct: 6   CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63

Query: 191 LLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG----------------KML 234
                 GF+ A    + P  +          +D   + VG                  +L
Sbjct: 64  AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123

Query: 235 DAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL 277
           ++++   R+ G+I + G+   Y  E P  V    ++    IR 
Sbjct: 124 NSLMQVTRVAGKIGIPGL---YVTEDPGAVDAAAKIGSLSIRF 163

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.0 bits (118), Expect = 5e-08
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 15/173 (8%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
           L   G+T Y+ L        G+ V +    G +G +    +K  G      + S  K + 
Sbjct: 9   LLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE- 65

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
              K G D      EE D        F   +     ++     + +   M++ GRI    
Sbjct: 66  DAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCA-SSLTDIDFNIMPKAMKVGGRIVSIS 124

Query: 252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGK 304
           +  Q+       + +L+    K + +     G       K L  ++  + E  
Sbjct: 125 IPEQHE------MLSLKPYGLKAVSISYSALGS-----IKELNQLLKLVSEKD 166

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 2e-07
 Identities = 30/171 (17%), Positives = 50/171 (29%), Gaps = 11/171 (6%)

Query: 131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVD 190
           ++G    T Y    +    K G    V    G VG  V    K AG   +      +   
Sbjct: 9   LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67

Query: 191 LLKNKFGFDDAFNYKEEPDLDA-ALKRCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRI 247
                 G  +  + K+     +  L       +   FE +G    M+DA+       G  
Sbjct: 68  EKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTS 127

Query: 248 AVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHL--YPKFLELV 296
            V G+     +        +    G+  +  G + G        PK +   
Sbjct: 128 VVVGVPPSAKMLTY---DPMLLFTGRTWK--GCVFGGLKSRDDVPKLVTEF 173

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 16/175 (9%)

Query: 132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDL 191
             +  +TAY  L +    + GE V V AA+GA+G    Q A+  G  V+ +A   EK+ L
Sbjct: 9   FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67

Query: 192 LKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCG 251
                  + A   +          R    G       V GK ++  L  +   GR+   G
Sbjct: 68  PLALGAEEAATYAEVPE-------RAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120

Query: 252 MISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH---LYPKFLELVIPAIREG 303
                    P       +L+ + + + GF          L  + L  ++P +   
Sbjct: 121 AAEGEVAPIPPL-----RLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 41.7 bits (96), Expect = 3e-05
 Identities = 17/179 (9%), Positives = 48/179 (26%), Gaps = 20/179 (11%)

Query: 8   VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRM--- 64
           ++ + V+ + +  G PK+  +   S   ++     + + V++K L    +P    ++   
Sbjct: 2   ITAQAVLYTQH--GEPKDV-LFTQS--FEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGV 56

Query: 65  ----------SKLDRPSFVDSFHPGELKFWILHIQNYAKDDLVWGSTGWEEYSLVTAPQL 114
                          P+             +    +  +       +     +  T    
Sbjct: 57  YPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALG 116

Query: 115 LIKIQHTDVPLSYYTGILGMPGVTAYAGLY-EVCSPKKGEYVYVS-AASGAVGQLVGQF 171
                      +         G+T    +       K    +Y    A+   G+ +  +
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.97
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.92
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.91
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.91
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.91
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.9
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.89
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.89
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.89
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.89
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.88
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.88
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.87
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.86
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.85
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.85
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.82
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.82
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.82
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.78
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.76
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.6
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.26
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.16
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.15
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.08
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.05
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.04
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.03
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.01
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.99
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.96
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.93
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.91
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.9
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.89
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.88
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.88
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.88
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.86
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.85
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.85
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.83
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.82
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.82
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.8
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.79
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.79
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.78
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.75
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.75
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	97.74
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.74
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.72
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.72
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.7
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.69
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.69
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.67
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.65
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.63
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.63
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.63
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.59
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	97.58
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.55
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.52
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	97.51
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.49
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.48
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.48
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.47
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.47
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.44
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.42
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.42
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.41
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.4
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.35
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.35
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.33
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.33
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.27
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	97.26
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.23
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.2
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.16
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.14
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.12
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.09
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.05
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	97.04
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.03
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	97.02
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.92
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.91
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.9
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.89
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.86
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.82
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.78
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.78
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.76
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.75
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.74
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.73
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.71
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.69
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.69
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.61
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.57
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	96.57
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.56
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.53
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.5
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.43
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.41
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.38
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.32
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	96.32
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.26
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	96.18
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	96.18
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	96.1
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.07
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.05
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	95.96
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.95
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	95.95
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.92
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.91
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	95.81
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.68
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.66
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.57
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.54
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.46
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.41
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	95.39
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.39
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	95.35
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	95.26
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.26
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	95.19
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.18
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.17
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.15
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	95.13
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.06
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.02
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.96
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.94
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	94.88
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	94.84
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.73
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.68
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.65
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.63
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.58
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.55
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.55
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.48
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.48
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.37
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.29
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.27
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	94.26
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.21
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.12
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.11
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.11
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.09
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.06
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	94.0
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.95
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.88
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.84
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.81
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.73
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.66
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.65
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.65
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.64
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.48
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	93.45
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.45
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.42
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.27
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.17
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	93.12
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.07
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.78
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.7
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.63
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	92.63
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	92.59
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.48
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.35
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.33
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.29
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.27
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.23
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.22
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	92.19
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.18
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.12
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.01
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	91.96
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	91.95
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.93
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.83
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.67
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.59
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	91.5
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	91.49
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	91.45
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	91.41
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.36
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.31
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	91.31
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.27
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	91.24
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	91.16
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.15
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.14
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.12
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.11
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.07
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	90.92
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	90.88
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.7
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.57
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.57
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.43
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	90.42
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.32
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	90.31
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.29
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.21
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	90.2
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.13
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	90.13
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.09
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	89.89
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.86
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	89.84
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.66
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	89.65
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	89.61
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.57
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	89.45
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.4
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.2
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.14
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.94
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.88
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	88.47
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.41
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.41
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.36
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.31
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.25
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.23
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	88.18
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	87.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	87.79
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	87.54
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.51
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	87.41
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	87.37
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	87.34
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	87.03
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.02
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.0
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	86.92
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.92
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	86.91
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	86.74
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.65
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	86.62
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	86.25
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.61
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.58
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	85.55
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	85.44
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.35
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	85.25
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.1
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	85.04
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	84.95
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	84.86
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.83
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.82
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	84.78
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	84.53
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.38
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	84.35
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.28
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	84.26
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.02
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	83.9
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	83.85
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.43
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	83.26
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.01
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	82.84
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.64
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.54
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.25
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	82.18
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	82.07
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	81.83
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.71
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.65
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.44
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.32
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.21
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	80.71
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	80.64
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	80.45
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	80.36
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	80.26
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	80.2

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.97  E-value=3.3e-30  Score=207.99  Aligned_cols=177  Identities=48%  Similarity=0.737  Sum_probs=153.5

Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      ++...+++.++++|||++|.+.+++++|++|||+||+|++|++++|+||..|++||++++++++.+.++ ++|+++++++
T Consensus         3 ~~~~l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~   81 (182)
T d1v3va2           3 LSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNY   81 (182)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhccc
Confidence            443356889999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCC-ccccchHHHHhccccccceec
Q 037444          205 KEEPDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKP-EGVHNLEQLIGKRIRLEGFLA  282 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  282 (339)
                      +++ ++.+.+.+.+.+ ++|+||||+|++.++.++++++++|+++.+|..+..+.... ........++.|++++.|+..
T Consensus        82 ~~~-~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~  160 (182)
T d1v3va2          82 KTV-NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIV  160 (182)
T ss_dssp             TSC-SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCG
T ss_pred             ccc-cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEE
Confidence            987 888888777666 99999999999999999999999999999997665433222 233456788999999999988


Q ss_pred             ccc-cchhHHHHHHHHHHHHcC
Q 037444          283 GDY-YHLYPKFLELVIPAIREG  303 (339)
Q Consensus       283 ~~~-~~~~~~~l~~~~~~l~~g  303 (339)
                      .++ ++...+.++++++++++|
T Consensus       161 ~~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         161 YRWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHTT
T ss_pred             eccChHHHHHHHHHHHHHHhCc
Confidence            777 445567789999999886

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=2.8e-30  Score=208.94  Aligned_cols=174  Identities=20%  Similarity=0.291  Sum_probs=151.9

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      +||+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|++++++++++
T Consensus         2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV   80 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred             chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence            689999999999999999999999999999999999999999999999999999999999999999 9999999999997


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc-
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY-  285 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  285 (339)
                       ++.+++++.+++ |+|++|||+|++.++.++++|+++|+++.+|.....+.     .......+.+++++.++..... 
T Consensus        81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYAD-----ASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTT-----CEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCC-----cccchHHHhCCcEEEEEEcccee
Confidence             999999999988 99999999999999999999999999999987654321     1122334567888777765443 


Q ss_pred             ---cchhHHHHHHHHHHHHcCCceee
Q 037444          286 ---YHLYPKFLELVIPAIREGKMVYV  308 (339)
Q Consensus       286 ---~~~~~~~l~~~~~~l~~g~~~~~  308 (339)
                         +...++.++++.+++++|++++.
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCcee
Confidence               44556789999999999999974

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-29  Score=202.03  Aligned_cols=163  Identities=26%  Similarity=0.330  Sum_probs=142.9

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      ++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+.+|++|+++++++++.+.++ ++|+++++|+++.
T Consensus         5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~   83 (174)
T d1yb5a2           5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV   83 (174)
T ss_dssp             HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST
T ss_pred             HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc
Confidence            688999999999999988899999999999999999999999999999999999999999999999 9999999999997


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY  286 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
                       ++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|..+.       .+.+...++.+++++.|+.+... 
T Consensus        84 -~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~~~-  154 (174)
T d1yb5a2          84 -NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSS-  154 (174)
T ss_dssp             -THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGC-
T ss_pred             -cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEecCC-
Confidence             999999999988 99999999999999999999999999999986432       24566788899999999876543 


Q ss_pred             chhHHHHHHHHHHHHc
Q 037444          287 HLYPKFLELVIPAIRE  302 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~  302 (339)
                        ..+.++++++++++
T Consensus       155 --~~~~~~~~~~~l~~  168 (174)
T d1yb5a2         155 --TKEEFQQYAAALQA  168 (174)
T ss_dssp             --CHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHHHHHH
Confidence              13445555555544

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.6e-28  Score=198.61  Aligned_cols=179  Identities=37%  Similarity=0.624  Sum_probs=145.0

Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCee
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDA  201 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g--~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v  201 (339)
                      +++...+++++++|||++|++.+++++|  ++|||+||+|++|++++|+||.+|+ .|++++.++++...+.+++|++++
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            5556667999999999999999999988  8899999999999999999999999 566667777776656548999999


Q ss_pred             eeCCChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCcc----ccchHHHHhccccc
Q 037444          202 FNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEG----VHNLEQLIGKRIRL  277 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~  277 (339)
                      +|++++ ++.+.+++.++.|+|+|||++|++.++.++++++++|+++.+|..++++...+..    ......+..|++++
T Consensus        82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~  160 (187)
T d1vj1a2          82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR  160 (187)
T ss_dssp             EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred             eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence            999998 9999999998779999999999999999999999999999999765543222111    11234566789999


Q ss_pred             cceecccccchhHHHHHHHHHHHHcCC
Q 037444          278 EGFLAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       278 ~~~~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      .++.+.++.+.+.+.++++.+++++|+
T Consensus       161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         161 ERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            998887777777888999999999986

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=2.3e-28  Score=196.78  Aligned_cols=169  Identities=25%  Similarity=0.272  Sum_probs=140.8

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      +||+++++++|||++|++.+++++|++|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|+++++|++++
T Consensus         5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~   83 (179)
T d1qora2           5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE   83 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC
Confidence            688999999999999998899999999999999999999999999999999999999999999999 9999999999997


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhc-cccccceecccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGK-RIRLEGFLAGDY  285 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  285 (339)
                       ++.++++++++| ++|+++|++|++.+..++.+++++|+++.++......     .......+..+ .+.+....+..+
T Consensus        84 -d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~  157 (179)
T d1qora2          84 -DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGY  157 (179)
T ss_dssp             -CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCHHHH
T ss_pred             -CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCc-----cccchhhhhccceEEEEeeEEeee
Confidence             999999999988 9999999999999999999999999999988755432     22233333333 233322222222


Q ss_pred             ---cchhHHHHHHHHHHHHcC
Q 037444          286 ---YHLYPKFLELVIPAIREG  303 (339)
Q Consensus       286 ---~~~~~~~l~~~~~~l~~g  303 (339)
                         ++...+.++++++++++|
T Consensus       158 ~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         158 ITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHHHHHHHCc
Confidence               344456678888998887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=8.8e-29  Score=196.59  Aligned_cols=168  Identities=22%  Similarity=0.254  Sum_probs=133.7

Q ss_pred             cccccCchhhhHHHHH---HHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          128 YTGILGMPGVTAYAGL---YEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l---~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      ++|+++++++|||+++   .+.++.++|++|||+||+|++|.+++|+|+.+|++|+++++++++.+.++ ++|+++++|+
T Consensus         5 eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~   83 (176)
T d1xa0a2           5 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEEC
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeec
Confidence            7999999999999665   45688899999999999999999999999999999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      ++  .+.+.++...++++|+|||++|++.+..++++|+++|+++.+|...+.     ..+.+...++.|++++.|.....
T Consensus        84 ~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~Gv~~~~  156 (176)
T d1xa0a2          84 ED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVY  156 (176)
T ss_dssp             C-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSS
T ss_pred             ch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEEEeCCc
Confidence            75  445545443444999999999999999999999999999999986553     34567889999999999975433


Q ss_pred             ccchhHHHHHHHHHHHHcCCcee
Q 037444          285 YYHLYPKFLELVIPAIREGKMVY  307 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~~  307 (339)
                      .+   .+...++.+.+. |.++|
T Consensus       157 ~~---~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         157 CP---MDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CC---HHHHHHHHHHHH-TTTCC
T ss_pred             CC---HHHHHHHHHHHh-cccCC
Confidence            21   333444455553 66665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=7.8e-27  Score=186.49  Aligned_cols=168  Identities=22%  Similarity=0.271  Sum_probs=147.1

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      .++.+++.+.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.+++++++.++ ++|+++++++++
T Consensus         5 ~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~   82 (174)
T d1f8fa2           5 LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKT   82 (174)
T ss_dssp             GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCC
Confidence            588999999999999989899999999999996 9999999999999999 5667788899999999 999999999998


Q ss_pred             hhhHHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          207 EPDLDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       207 ~~~~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                      + ++.+++++++++++|+||||+|+ ..++.++++++++|+++.+|.....    .....+...++.+++++.|+...++
T Consensus        83 ~-~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          83 Q-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             S-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             c-CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCCEEEEEEecCC
Confidence            7 99999999998899999999997 5889999999999999999874332    2234677888999999999876554


Q ss_pred             cchhHHHHHHHHHHHHcCC
Q 037444          286 YHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       286 ~~~~~~~l~~~~~~l~~g~  304 (339)
                      .  .+++++++++++++|+
T Consensus       158 ~--~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 S--PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             C--HHHHHHHHHHHHHTTS
T ss_pred             C--hHHHHHHHHHHHHcCC
Confidence            2  2567999999999985

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.5e-27  Score=182.15  Aligned_cols=140  Identities=18%  Similarity=0.200  Sum_probs=122.5

Q ss_pred             ccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---
Q 037444            9 SNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---   85 (339)
Q Consensus         9 ~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---   85 (339)
                      -|||++++++  |+|  +.+++.. +.|.|. +++ +||+|||++++||++|++.+.|.+.....+|.++|||++|+   
T Consensus         2 ~MkAv~~~~~--G~p--~~l~~~~-~~~~P~-~~~-~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~   74 (150)
T d1yb5a1           2 LMRAVRVFEF--GGP--EVLKLRS-DIAVPI-PKD-HQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEA   74 (150)
T ss_dssp             EEEEEEESSC--SSG--GGEEEEE-EEECCC-CCT-TEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEE
T ss_pred             ceeEEEEEcc--CCc--ceEEEEe-ecCCCC-CCC-CeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEe
Confidence            4799999999  888  5666653 356663 478 99999999999999999999997776667789999999999   


Q ss_pred             --eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           86 --LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                        +++++|++||||++.    |+|+||+.++++. ++++ |++++.. ++|+++..+.|||+++...+..+.|+++||+
T Consensus        75 vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          75 VGDNASAFKKGDRVFTSSTISGGYAEYALAADHT-VYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             ECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGG-EEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             ecceeeccccCccccccccccccccccccccccc-cccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence              788999999999876    7999999999999 9999 9996665 6889999999999999899999999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=1.6e-26  Score=184.22  Aligned_cols=163  Identities=21%  Similarity=0.272  Sum_probs=147.5

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      +||++++++.|||+++ +..++++|++|+|+|++|++|++++|+++.+|+ +|+++.+++++++.++ ++|+++++++++
T Consensus         5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~   82 (170)
T d1jvba2           5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM   82 (170)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence            7999999999999999 568999999999999889999999999999996 9999999999999999 999999999998


Q ss_pred             hhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          207 EPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       207 ~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      . ++.+.+++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|....      ....+...++.+++++.|+...+
T Consensus        83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGSLVGN  155 (170)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEECCSCC
T ss_pred             c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEEecCC
Confidence            7 999999999887 89999999997 478899999999999999987543      23566778899999999998877


Q ss_pred             ccchhHHHHHHHHHHHHcCC
Q 037444          285 YYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~  304 (339)
                           +++++++++++++|+
T Consensus       156 -----~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 -----QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             -----HHHHHHHHHHHHTTS
T ss_pred             -----HHHHHHHHHHHHcCC
Confidence                 788999999999986

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.94  E-value=8.3e-27  Score=188.88  Aligned_cols=171  Identities=19%  Similarity=0.243  Sum_probs=141.1

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCHH----HHHHHHHHhCCCeee
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVS-AASGAVGQLVGQFAKLAGCYVVGSAGSKE----KVDLLKNKFGFDDAF  202 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~-ga~g~~G~~ai~la~~~ga~V~~~~~~~~----~~~~~~~~~g~~~v~  202 (339)
                      ++|+++++++|||++|.+.+++++|++++|+ ||+|++|++++|+||.+|++||+++++.+    +.+.++ ++|+++++
T Consensus         5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi   83 (189)
T d1gu7a2           5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVI   83 (189)
T ss_dssp             HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEE
T ss_pred             HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEE
Confidence            6999999999999999988999999998886 78899999999999999999999986643    455677 89999999


Q ss_pred             eCCCh--hhHHHHHHHhC---CCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccc
Q 037444          203 NYKEE--PDLDAALKRCF---PQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRL  277 (339)
Q Consensus       203 ~~~~~--~~~~~~v~~~~---~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (339)
                      +++..  .++.+.+++.+   ++++|++||++|++.+..++++|+++|+++.+|..++.     ....+...++.|++++
T Consensus        84 ~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          84 TEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             EHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEE
T ss_pred             eccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHHCCcEE
Confidence            87542  13445555543   34899999999999999999999999999999975442     2346678888999999


Q ss_pred             cceecccc----cchhHHHHHHHHHHHHcCC
Q 037444          278 EGFLAGDY----YHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       278 ~~~~~~~~----~~~~~~~l~~~~~~l~~g~  304 (339)
                      .|+++..+    ++...+.++++++++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            99887665    3445678899999999885

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=1.4e-27  Score=190.15  Aligned_cols=144  Identities=26%  Similarity=0.335  Sum_probs=120.7

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      ++|+++++++|||++|. .+++++|++|||+||+|++|++++|+||.+|++|+++++++++++.++ ++|+++++|+.+ 
T Consensus         5 eAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~-   81 (171)
T d1iz0a2           5 EAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAE-   81 (171)
T ss_dssp             HHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGG-
T ss_pred             HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhh-
Confidence            68899999999999995 589999999999999999999999999999999999999999999999 999999998864 


Q ss_pred             hhHHHHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccc
Q 037444          208 PDLDAALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDY  285 (339)
Q Consensus       208 ~~~~~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (339)
                        ..   .+.+.+ |+|+||||+| +.++.++++++++|+++.+|...+.     ..+.+...++.|++++.|+++.++
T Consensus        82 --~~---~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~~~  149 (171)
T d1iz0a2          82 --VP---ERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL  149 (171)
T ss_dssp             --HH---HHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             --hh---hhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCcCh
Confidence              22   333334 8999999988 6789999999999999999875432     234566778899999999987665

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=2.4e-26  Score=179.09  Aligned_cols=139  Identities=13%  Similarity=0.081  Sum_probs=118.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .++||+++++.  +++    +.+...++|.|. +++ +||||||+++|||++|++.+.|.+.....+|+++|+|++|+  
T Consensus         2 ~~~KA~v~~~~--~~~----~~~~i~~v~~P~-~~~-~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~   73 (152)
T d1xa0a1           2 SAFQAFVVNKT--ETE----FTAGVQTISMDD-LPE-GDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVV   73 (152)
T ss_dssp             CEEEEEEEEEE--TTE----EEEEEEEEEGGG-SCS-CSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEE
T ss_pred             CceEEEEEEec--CCc----eEEEEEEccCCC-CCC-CEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeee
Confidence            47899999998  766    244445667674 478 99999999999999999988887665557799999999999  


Q ss_pred             -eCCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEE
Q 037444           86 -LHIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYV  155 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~v  155 (339)
                       .+++.|++||+|+..         |+|+||+.++++. ++++ |++  ++.++|+++++++||+.++...++++ |++|
T Consensus        74 ~~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~-~~~i-P~~--l~~~aa~l~~a~~ta~~~~~~~~~~~-G~tV  148 (152)
T d1xa0a1          74 SSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEW-LVPL-PKG--LERIAQEISLAELPQALKRILRGELR-GRTV  148 (152)
T ss_dssp             ECCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGG-CEEC-CTT--HHHHEEEEEGGGHHHHHHHHHHTCCC-SEEE
T ss_pred             ccCCCccccCCEEEEecCccccccCCCcceeeeehhhc-cccC-CCC--CCHHHHHHHHHHHHHHHHHHHhcCCC-CCEE
Confidence             778889999999865         6899999999999 9999 999  55578889999999999998888875 9999


Q ss_pred             EEEc
Q 037444          156 YVSA  159 (339)
Q Consensus       156 lI~g  159 (339)
                      ||+|
T Consensus       149 L~l~  152 (152)
T d1xa0a1         149 VRLA  152 (152)
T ss_dssp             EECC
T ss_pred             EEcC
Confidence            9975

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=8.7e-26  Score=179.21  Aligned_cols=161  Identities=22%  Similarity=0.320  Sum_probs=140.1

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      ++|+++++++|||+++ +.+++++|++|+|.|+ |++|++++|+||.+|++|+++++++++++.++ ++|+++++++++.
T Consensus         5 ~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~   81 (166)
T d1llua2           5 EIAPILCAGVTVYKGL-KQTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE   81 (166)
T ss_dssp             HHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred             HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence            6889999999999999 5589999999999986 99999999999999999999999999999999 9999999999987


Q ss_pred             hhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccc
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYH  287 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (339)
                       +..+.++..+.+..++++++.+...++.++++++++|+++.+|....      ....+...++.|++++.|+...+   
T Consensus        82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~---  151 (166)
T d1llua2          82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT---  151 (166)
T ss_dssp             -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC---
Confidence             88888888766544555545556799999999999999999987433      23567788999999999988877   


Q ss_pred             hhHHHHHHHHHHHHcC
Q 037444          288 LYPKFLELVIPAIREG  303 (339)
Q Consensus       288 ~~~~~l~~~~~~l~~g  303 (339)
                        +++++++++++++|
T Consensus       152 --~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 --RADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHHCc
Confidence              67789999999987

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=9.2e-26  Score=181.75  Aligned_cols=164  Identities=22%  Similarity=0.259  Sum_probs=139.0

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      .+|.+.++++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++ ++|+++++++++
T Consensus         5 ~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~   82 (182)
T d1vj0a2           5 VLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEETTT
T ss_pred             HHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEeccc
Confidence            578899999999999988889999999999996 9999999999999999 8999999999999999 999999999987


Q ss_pred             hhhH---HHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccc-hHHHHhccccccce
Q 037444          207 EPDL---DAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHN-LEQLIGKRIRLEGF  280 (339)
Q Consensus       207 ~~~~---~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  280 (339)
                      . +.   .+.+++.+.+ ++|+||||+|+ ..++.++++++++|+++.+|.....    ...+.. ...++.|++++.|+
T Consensus        83 ~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l~~k~l~i~G~  157 (182)
T d1vj0a2          83 T-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWLVLKNATFKGI  157 (182)
T ss_dssp             S-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHTTTTTCEEEEC
T ss_pred             c-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHHHHCCcEEEEE
Confidence            5 54   4457777877 99999999997 4789999999999999999864332    112233 33467899999999


Q ss_pred             ecccccchhHHHHHHHHHHHHcC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREG  303 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g  303 (339)
                      +..+     .+.+++++++++++
T Consensus       158 ~~~~-----~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         158 WVSD-----TSHFVKTVSITSRN  175 (182)
T ss_dssp             CCCC-----HHHHHHHHHHHHTC
T ss_pred             EeCC-----HHHHHHHHHHHHHC
Confidence            8877     67788888888765

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=2.5e-25  Score=177.46  Aligned_cols=161  Identities=22%  Similarity=0.316  Sum_probs=141.0

Q ss_pred             cccccCchhhhHHHHHHHhc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          128 YTGILGMPGVTAYAGLYEVC-SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~-~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                      ++|+++++++|||++|.+.. .+++|++|+|.|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|++++++++
T Consensus         8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~   85 (172)
T d1h2ba2           8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR   85 (172)
T ss_dssp             HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred             HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence            78999999999999997765 5899999999996 9999999999999998 7888889999999999 99999999988


Q ss_pred             ChhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          206 EEPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       206 ~~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      +  +..+.+.+.+.+ ++|+||||+|+. .++.++++++++|+++.+|...       ..+.+...++.+++++.|+...
T Consensus        86 ~--~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-------~~~~~~~~l~~k~~~i~Gs~~~  156 (172)
T d1h2ba2          86 R--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-------ELRFPTIRVISSEVSFEGSLVG  156 (172)
T ss_dssp             S--CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-------CCCCCHHHHHHTTCEEEECCSC
T ss_pred             c--cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-------cccCCHHHHHhCCcEEEEEEec
Confidence            7  455566677777 999999999975 7999999999999999998632       1345678889999999999887


Q ss_pred             cccchhHHHHHHHHHHHHcCC
Q 037444          284 DYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      +     .++++++++++++|+
T Consensus       157 ~-----~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         157 N-----YVELHELVTLALQGK  172 (172)
T ss_dssp             C-----HHHHHHHHHHHHTTS
T ss_pred             C-----HHHHHHHHHHHHcCC
Confidence            7     677999999999986

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=7e-26  Score=181.08  Aligned_cols=139  Identities=16%  Similarity=0.063  Sum_probs=116.5

Q ss_pred             ccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEE
Q 037444            5 QEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFW   84 (339)
Q Consensus         5 ~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G   84 (339)
                      +||.||||++++++  |+|    +++++  +|.| .+++ +||||||+++|||++|++.+.|.+.....+|.++|||++|
T Consensus         1 ~~P~tMkA~v~~~~--g~p----l~l~e--vp~P-~~~~-~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G   70 (175)
T d1llua1           1 TLPQTMKAAVVHAY--GAP----LRIEE--VKVP-LPGP-GQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVG   70 (175)
T ss_dssp             CCCSEEEEEEBCST--TSC----CEEEE--EECC-CCCT-TCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEE
T ss_pred             CcchhcEEEEEEeC--CCC----CEEEE--eECC-CCCC-CEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceE
Confidence            47899999999998  777    46654  5556 3478 9999999999999999999999776556789999999999


Q ss_pred             e-----eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCcccc
Q 037444           85 I-----LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYY  128 (339)
Q Consensus        85 ~-----~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~  128 (339)
                      +     ++++.|++||||+..                               |+|+||+.++++. ++++ |++++.. .
T Consensus        71 ~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~-~~~i-Pd~l~~~-~  147 (175)
T d1llua1          71 YVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNY-VGIL-PKNVKAT-I  147 (175)
T ss_dssp             EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTT-SEEC-CTTCCCC-E
T ss_pred             EEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHH-EEEC-CCCCChh-H
Confidence            9     788999999999742                               4799999999999 9999 9996544 4


Q ss_pred             ccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444          129 TGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus       129 aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                      ++++..++.++++++ +.+ ..+|++|||+
T Consensus       148 a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl  175 (175)
T d1llua1         148 HPGKLDDINQILDQM-RAG-QIEGRIVLEM  175 (175)
T ss_dssp             EEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred             HHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence            677888899999887 444 4479999984

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.5e-25  Score=178.25  Aligned_cols=166  Identities=25%  Similarity=0.292  Sum_probs=146.5

Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      ++ +||++++++.|||++|. ..++++|++|+|+|+ |++|++++|+|+..|++|+++++++++++.++ ++|+++++++
T Consensus         3 ~e-eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~   78 (168)
T d1rjwa2           3 FE-EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNP   78 (168)
T ss_dssp             HH-HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECT
T ss_pred             HH-HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceeccc
Confidence            44 79999999999999994 578999999999985 99999999999999999999999999999999 9999999999


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      .+. ++.+.++..+.+..|+++|+.+...++.++++++++|+++.+|....      ....+...++.+++++.|+...+
T Consensus        79 ~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~  151 (168)
T d1rjwa2          79 LKE-DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT  151 (168)
T ss_dssp             TTS-CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC
T ss_pred             ccc-hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEeeCC
Confidence            997 99999999888766666666666789999999999999999987543      23567788899999999988776


Q ss_pred             ccchhHHHHHHHHHHHHcCCce
Q 037444          285 YYHLYPKFLELVIPAIREGKMV  306 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~  306 (339)
                           +++++++++++++|+++
T Consensus       152 -----~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 -----RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             -----HHHHHHHHHHHHTTSCC
T ss_pred             -----HHHHHHHHHHHHhCCCC
Confidence                 77899999999999875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=1.1e-25  Score=179.25  Aligned_cols=167  Identities=19%  Similarity=0.144  Sum_probs=136.1

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      +|+.++++++|||+++ +.+++++|++|+|+|+ |++|++++|+||.+|+ +|+++++++++++.++ ++|+++++++++
T Consensus         5 ~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~   81 (174)
T d1jqba2           5 NAVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKN   81 (174)
T ss_dssp             HHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGG
T ss_pred             HHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccc
Confidence            5667889999999998 6699999999999986 9999999999999998 7999999999999999 999999999988


Q ss_pred             hhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          207 EPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       207 ~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      + ++.+.+++.+++ |+|+||||+|+ ..+++++++++++|+++.+|.+....  ....+...+....+++++.+.....
T Consensus        82 ~-~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~--~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          82 G-HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGD--ALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             S-CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSS--EEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             h-hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCC--cCcCcHhHHHHHhCccEEEEecCCC
Confidence            7 899999999998 99999999997 57899999999999999998754321  0001111223344667777665543


Q ss_pred             ccchhHHHHHHHHHHHHcCC
Q 037444          285 YYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~  304 (339)
                          .+...+.++++++.|+
T Consensus       159 ----~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 ----GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             ----HHHHHHHHHHHHHTTS
T ss_pred             ----CcccHHHHHHHHHcCC
Confidence                1445677888888875

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2.6e-25  Score=167.81  Aligned_cols=128  Identities=14%  Similarity=0.074  Sum_probs=109.2

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEeeCCC
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWILHIQ   89 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~~~v~   89 (339)
                      |||++++++  |+|    +++.  ++|.|. +++ +||+|||+++|||++|++.+.|.+.....+|+++|||++|+    
T Consensus         1 MkA~~~~~~--G~~----l~~~--e~~~p~-p~~-~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~----   66 (131)
T d1iz0a1           1 MKAWVLKRL--GGP----LELV--DLPEPE-AEE-GEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGV----   66 (131)
T ss_dssp             CEEEEECST--TSC----EEEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEE----
T ss_pred             CcEEEEccC--CCC----CEEE--EccCCC-CCC-CEEEEEEEEEeccccccccccccccccccceeEeeeeeEEe----
Confidence            799999998  776    4554  455563 478 99999999999999999999998765567899999999997    


Q ss_pred             CCCCCCEEEec---cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444           90 NYAKDDLVWGS---TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus        90 ~~~~Gd~V~~~---g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                        -+||+|+++   |+|+||+.++++. ++++ |++++.. ++|+++..+.|||++|.+.+  +.|++||++
T Consensus        67 --VvGd~V~~~~~~G~~aey~~v~~~~-~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          67 --VEGRRYAALVPQGGLAERVAVPKGA-LLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             --ETTEEEEEECSSCCSBSEEEEEGGG-CEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             --eccceEEEEeccCccceeeeeCHHH-eEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence              259999987   8999999999999 9999 9996665 68889999999999997765  459999873

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.2e-25  Score=178.53  Aligned_cols=161  Identities=19%  Similarity=0.172  Sum_probs=135.7

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      .||++.+++.|||++|. ..++++|++|+|+|+ |++|++++|+||.+|++|+++++++++++.++ ++|+++++++.+.
T Consensus         5 ~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~   81 (168)
T d1piwa2           5 LAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEE   81 (168)
T ss_dssp             HHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGT
T ss_pred             HHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccch
Confidence            47899999999999994 589999999999996 99999999999999999999999999999999 9999999987653


Q ss_pred             hhHHHHHHHhCCCCccEEEECCChh---hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGGK---MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      .++.    +...+++|.++||+++.   .+..++++++++|+++.+|.....      ...+...++.|++++.|+...+
T Consensus        82 ~~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~Gs~~g~  151 (168)
T d1piwa2          82 GDWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH------EMLSLKPYGLKAVSISYSALGS  151 (168)
T ss_dssp             SCHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS------CCEEECGGGCBSCEEEECCCCC
T ss_pred             HHHH----HhhhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc------ccccHHHHHhCCcEEEEEeeCC
Confidence            1332    22334899999998853   578899999999999999875432      2345566788999999988877


Q ss_pred             ccchhHHHHHHHHHHHHcCCce
Q 037444          285 YYHLYPKFLELVIPAIREGKMV  306 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~~~  306 (339)
                           .++++++++++++|+++
T Consensus       152 -----~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 -----IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             -----HHHHHHHHHHHHHTTCC
T ss_pred             -----HHHHHHHHHHHHhCCCC
Confidence                 77899999999999875

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.92  E-value=1.3e-24  Score=172.89  Aligned_cols=168  Identities=19%  Similarity=0.186  Sum_probs=134.4

Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeee
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFN  203 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~  203 (339)
                      ++ .+|.+.+.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++..++++++.++ ++|++++++
T Consensus         3 Le-~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~   79 (174)
T d1e3ia2           3 LE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLN   79 (174)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEEC
T ss_pred             HH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccC
Confidence            44 688999999999999988899999999999985 9999999999999999 7889999999999999 999999998


Q ss_pred             CCChhhHHHHHH-HhCCCCccEEEECCCh-hhHHHHHHhhccC-CEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          204 YKEEPDLDAALK-RCFPQGIDIYFENVGG-KMLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       204 ~~~~~~~~~~v~-~~~~g~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      +...++....+. ...++|+|++|||+|+ ..+++++++++++ |+++.+|....      ....+...++. +.++.|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~------~~~i~~~~~~~-~k~i~Gs  152 (174)
T d1e3ia2          80 PRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------EMTIPTVDVIL-GRSINGT  152 (174)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------EEEEEHHHHHT-TCEEEEC
T ss_pred             CccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC------ccccchHHHhc-cCEEEEE
Confidence            654313444444 4444599999999997 5899999999996 99999987533      22344444443 4567777


Q ss_pred             ecccccchhHHHHHHHHHHHHcCC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      ...++.  ..+++.++++++++|+
T Consensus       153 ~~Gs~~--~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         153 FFGGWK--SVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             SGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EeeCCC--hHHHHHHHHHHHHCcC
Confidence            665542  2567889999999886

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.92  E-value=2.2e-24  Score=172.76  Aligned_cols=169  Identities=20%  Similarity=0.210  Sum_probs=135.0

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      ++|.+++++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++ ++|+++++++.+
T Consensus         5 ~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~   82 (176)
T d2fzwa2           5 KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQD   82 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCc
Confidence            688999999999999988899999999999997 8999999999999997 7888888899999999 999999998854


Q ss_pred             h-hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          207 E-PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       207 ~-~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      . ++..+.++..+++++|+|||++|+. .++.++.+++++|+++.++......    .........+.++.++.|+...+
T Consensus        83 ~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~----~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          83 FSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----EEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEEECTHHHHTTCEEEECSGGG
T ss_pred             hhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeecccc----ccccccHHHHHCCCEEEEEeeeC
Confidence            2 1566666666666999999999974 6788889999988887775433221    11222333445778888887765


Q ss_pred             ccchhHHHHHHHHHHHHcCC
Q 037444          285 YYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       285 ~~~~~~~~l~~~~~~l~~g~  304 (339)
                      ...  .+++.++++++++|+
T Consensus       159 ~~~--~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKS--VESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CcH--HHHHHHHHHHHHcCC
Confidence            432  567889999999886

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.2e-24  Score=172.75  Aligned_cols=160  Identities=23%  Similarity=0.275  Sum_probs=133.8

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCCh
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEE  207 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~  207 (339)
                      .+|++++++.|+|++| +.+++++|++|+|+|+ |++|++++|+||.+|+++++++.++++++.++ ++|+++++++.+.
T Consensus         8 ~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~   84 (168)
T d1uufa2           8 AVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA   84 (168)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH
T ss_pred             HHHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh
Confidence            5778999999999999 5689999999999986 99999999999999999999999999999999 9999999998875


Q ss_pred             hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccccc
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYY  286 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (339)
                       +...    ...+++|++|||+|+. .+..++++++++|+++.+|....     .........++.+++++.|+...+  
T Consensus        85 -~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-----~~~~~~~~~l~~k~~~i~Gs~~~~--  152 (168)
T d1uufa2          85 -DEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPAT-----PHKSPEVFNLIMKRRAIAGSMIGG--  152 (168)
T ss_dssp             -HHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC--
T ss_pred             -hHHH----HhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCC-----CcccccHHHHHHCCcEEEEEeecC--
Confidence             3222    1123899999999974 79999999999999999987543     223456778888999999998877  


Q ss_pred             chhHHHHHHHHHHHHcCCc
Q 037444          287 HLYPKFLELVIPAIREGKM  305 (339)
Q Consensus       287 ~~~~~~l~~~~~~l~~g~~  305 (339)
                         .++++++++++++++|
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               7778999999988764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=3.4e-24  Score=170.66  Aligned_cols=164  Identities=18%  Similarity=0.211  Sum_probs=134.1

Q ss_pred             cccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          126 SYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       126 ~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                      +++.|++..++++||+++ +..++++|++|+|+| +|++|++++|+|+.+|++|+++++++++++.++ ++|++.+++.+
T Consensus         2 S~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~   78 (170)
T d1e3ja2           2 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD   78 (170)
T ss_dssp             CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence            346677888999999999 668999999999998 599999999999999999999999999999999 99998776543


Q ss_pred             C--h--hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          206 E--E--PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       206 ~--~--~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      .  .  .+..+.+++..++++|+||||+|++ .++.++++++++|+++.+|.+..      ....+...++.|++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs  152 (170)
T d1e3ja2          79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSV  152 (170)
T ss_dssp             TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEEC
T ss_pred             ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEE
Confidence            3  1  1334555555555999999999985 78999999999999999997543      2346778899999999987


Q ss_pred             ecccccchhHHHHHHHHHHHHcCC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      +...      +.++++++++++|+
T Consensus       153 ~~~~------~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         153 FRYC------NDYPIALEMVASGR  170 (170)
T ss_dssp             CSCS------SCHHHHHHHHHTTS
T ss_pred             ECCH------HHHHHHHHHHHcCC
Confidence            5432      24678889998885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2e-24  Score=172.09  Aligned_cols=165  Identities=18%  Similarity=0.199  Sum_probs=138.1

Q ss_pred             cccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          126 SYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       126 ~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      +++.|++..++++||+++ +++++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.+++++++.++ ++|++++++.
T Consensus         2 S~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~   78 (171)
T d1pl8a2           2 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI   78 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred             CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence            346677888999999998 5689999999999986 9999999999999999 8999999999999999 9999999988


Q ss_pred             CChhhHHHHHHHh---CCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          205 KEEPDLDAALKRC---FPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       205 ~~~~~~~~~v~~~---~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      +.. +..+..+.+   .++++|+||||+|++ .++.++++++++|+++.+|.+..      ....+...++.|++++.|+
T Consensus        79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~------~~~~~~~~~~~k~l~i~Gs  151 (171)
T d1pl8a2          79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGV  151 (171)
T ss_dssp             SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEEC
T ss_pred             ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHHCCcEEEEE
Confidence            775 655544433   233899999999975 78999999999999999997543      2356778889999999987


Q ss_pred             ecccccchhHHHHHHHHHHHHcCCce
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGKMV  306 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~~~  306 (339)
                      +...      +.++++++++++|++.
T Consensus       152 ~~~~------~~~~~al~li~~gkid  171 (171)
T d1pl8a2         152 FRYC------NTWPVAISMLASKSVN  171 (171)
T ss_dssp             CSCS------SCHHHHHHHHHTTSCC
T ss_pred             eCCH------hHHHHHHHHHHcCCCC
Confidence            6422      3478899999999874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=3.3e-25  Score=177.52  Aligned_cols=127  Identities=13%  Similarity=0.045  Sum_probs=106.9

Q ss_pred             CeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC--CCCCCCCCCCCeeEEe-----eCCCCCCCCCEEEe
Q 037444           27 DMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR--PSFVDSFHPGELKFWI-----LHIQNYAKDDLVWG   99 (339)
Q Consensus        27 ~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~--~~~~~p~~~G~e~~G~-----~~v~~~~~Gd~V~~   99 (339)
                      ++++  .++|.| .+++ +||||||+++|||++|++.+.+...  ....+|+++|||++|+     +++++|++||||+.
T Consensus        12 ~l~~--~e~~~P-~~~~-~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~   87 (178)
T d1e3ja1          12 DLRL--EQRPIP-EPKE-DEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAV   87 (178)
T ss_dssp             EEEE--EECCCC-CCCT-TEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred             cEEE--EEeECC-CCCC-CEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEE
Confidence            3455  456666 4488 9999999999999999998876543  2345678999999999     78899999999975


Q ss_pred             c-------------------------------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcC
Q 037444          100 S-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCS  148 (339)
Q Consensus       100 ~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~  148 (339)
                      .                               |+|+||++++++. ++++ |++++.. ++++++.++.|||+++ +.++
T Consensus        88 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~-~~~i-P~~~~~~-~aa~~~~~~~ta~~a~-~~~~  163 (178)
T d1e3ja1          88 EPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF-CHKL-PDNCNVK-QLVTHSFKLEQTVDAF-EAAR  163 (178)
T ss_dssp             CCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCCCG-GGEEEEEEGGGHHHHH-HHHH
T ss_pred             CcccccCCccccccCCccccccccceeccccccccceeeeecccc-eeeC-CCCCCHH-HHHHHHhHHHHHHHHH-HHhC
Confidence            2                               6899999999998 9999 9996555 6888899999999998 6689


Q ss_pred             CCCCCEEEEEcCC
Q 037444          149 PKKGEYVYVSAAS  161 (339)
Q Consensus       149 ~~~g~~vlI~ga~  161 (339)
                      +++|++|+|+||+
T Consensus       164 ~~~g~~VlVig~C  176 (178)
T d1e3ja1         164 KKADNTIKVMISC  176 (178)
T ss_dssp             HCCTTCSEEEEEC
T ss_pred             CCCCCEEEEEccc
Confidence            9999999999975

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=7.2e-26  Score=180.10  Aligned_cols=165  Identities=22%  Similarity=0.261  Sum_probs=132.5

Q ss_pred             cccccCchhhhHHHHHH---HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeC
Q 037444          128 YTGILGMPGVTAYAGLY---EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNY  204 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~---~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~  204 (339)
                      ++|++++++.|||++++   +.+...++++|||+||+|++|++++|+||.+|++||++++++++.+.++ ++|+++++++
T Consensus         5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~   83 (177)
T d1o89a2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred             HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence            79999999999998764   3344455679999999999999999999999999999999999999999 9999999998


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      ++. ++.+   .+.+...|.++|++|+..+..++++++++|+++.+|..++.+     ...+...++.|++++.|++...
T Consensus        84 ~~~-~~~~---~l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~-----~~~~~~~~~~k~~~i~G~~~~~  154 (177)
T d1o89a2          84 DEF-AESR---PLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFT-----LPTTVMPFILRNVRLQGVDSVM  154 (177)
T ss_dssp             GGS-SSCC---SSCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSC-----CCCCSHHHHHHCCEEEECCSSS
T ss_pred             ccH-HHHH---HHHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCcc-----ccccHHHHHHCCCeEEEEeccc
Confidence            765 4432   223347899999999999999999999999999999866542     3456778899999999976544


Q ss_pred             c-cchhHHHHHHHHHHHHc
Q 037444          285 Y-YHLYPKFLELVIPAIRE  302 (339)
Q Consensus       285 ~-~~~~~~~l~~~~~~l~~  302 (339)
                      . ++...+.++++.+.+.+
T Consensus       155 ~~~~~~~~~~~~L~~~l~~  173 (177)
T d1o89a2         155 TPPERRAQAWQRLVADLPE  173 (177)
T ss_dssp             CCHHHHHHHHHHHHHHSCH
T ss_pred             CCHHHHHHHHHHHHHhccc
Confidence            3 44445556665554443

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.91  E-value=9.1e-25  Score=177.78  Aligned_cols=139  Identities=13%  Similarity=0.051  Sum_probs=119.1

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      .++++||+++++.  +.|    +++++  +|.| .+++ +||+|||.++|||++|++.+.+.... ..+|.++|||++|+
T Consensus         5 ~~~~~kAav~~~~--~~p----l~i~e--v~~P-~p~~-~eVlIkv~a~giCgsD~~~~~g~~~~-~~~p~i~GhE~~G~   73 (199)
T d1cdoa1           5 KVIKCKAAVAWEA--NKP----LVIEE--IEVD-VPHA-NEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGI   73 (199)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEE
T ss_pred             CceEEEEEEEecC--CCC----cEEEE--EECC-CCCC-CEEEEEEEEEEEecchhhhhhhcccc-cccccccccccceE
Confidence            4578899999997  777    46655  5555 3478 99999999999999999999886543 45689999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEe
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  109 (339)
                           +++++|++||||+..                                                   |+|+||+++
T Consensus        74 v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v  153 (199)
T d1cdoa1          74 VESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVV  153 (199)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEE
T ss_pred             EEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEE
Confidence                 889999999999753                                                   579999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                      ++.. ++++ |++++++ +++++.+++.|++.++...+..+.|++|||+
T Consensus       154 ~~~~-~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         154 NQIA-VAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             EGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             chHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999 9999 9997666 7889999999999999888889999999984

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=6.8e-24  Score=168.90  Aligned_cols=167  Identities=18%  Similarity=0.167  Sum_probs=133.9

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      ++|.|.+++.|||+++.+.+++++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++++.++ ++|+++++|++.
T Consensus         4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~   81 (174)
T d1p0fa2           4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD   81 (174)
T ss_dssp             GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence            688999999999999988899999999999996 9999999999999998 8999999999999999 999999999876


Q ss_pred             hhh-HHHHHHHhCCCCccEEEECCCh-hhHHHHHHhhcc-CCEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          207 EPD-LDAALKRCFPQGIDIYFENVGG-KMLDAVLLNMRL-RGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       207 ~~~-~~~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      .++ ..+..+..+++++|++||++|+ ..+..++..+++ +|+++.+|.....    ...+.+... +.++.++.|+.+.
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~~~-~~~~~~i~Gs~~G  156 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPLL-LLTGRSLKGSVFG  156 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTHH-HHTTCEEEECSGG
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCHHH-HhCCCEEEEEEeC
Confidence            523 3444444555599999999997 577889988877 4999999975432    112233333 3467889888766


Q ss_pred             cccchhHHHHHHHHHHHHcCC
Q 037444          284 DYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      ++.   .++++++++++++|+
T Consensus       157 ~~~---~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         157 GFK---GEEVSRLVDDYMKKK  174 (174)
T ss_dssp             GCC---GGGHHHHHHHHHTTS
T ss_pred             CCC---HHHHHHHHHHHHcCC
Confidence            542   346888999998885

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=9.4e-25  Score=173.34  Aligned_cols=133  Identities=17%  Similarity=0.094  Sum_probs=111.9

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe---
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI---   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~---   85 (339)
                      ||++++++  |+|    ++++  ++|.|.++++ +||||||.+++||++|++.+.|.+..  ....|+++|||++|+   
T Consensus         1 kA~~~~~~--g~p----l~i~--~v~~P~~~~~-~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~   71 (171)
T d1h2ba1           1 KAARLHEY--NKP----LRIE--DVDYPRLEGR-FDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE   71 (171)
T ss_dssp             CEEEESST--TSC----CEEE--CCCCCCCBTT-BCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEE
T ss_pred             CEEEEEeC--CCC----CEEE--EeeCCCCCCC-CEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeec
Confidence            79999998  877    4554  5666654577 99999999999999999999886542  234689999999999   


Q ss_pred             --eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 --LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 --~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                        +++++|++||||++.                              |+|+||+.++++. ++++ |++++++ .++++.
T Consensus        72 vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~e-~aa~~~  148 (171)
T d1h2ba1          72 VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRS-VIKL-PKDVRVE-VDIHKL  148 (171)
T ss_dssp             ECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGG-EEEC-CTTCCCC-EEEEEG
T ss_pred             ccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhc-ceec-CCCCCHH-HHHHHH
Confidence              788999999999753                              6899999999998 9999 9996554 577889


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEE
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                      .++.|||+++ +.+++ .|++|||
T Consensus       149 ~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         149 DEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             GGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             hHHHHHHHHH-HhcCC-CCCEEEe
Confidence            9999999999 55788 8999998

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=1.5e-24  Score=175.81  Aligned_cols=137  Identities=16%  Similarity=0.079  Sum_probs=116.2

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      |+|||+++++.  |+|    ++++  ++|.| .+++ +||||||.++|||++|++++.|.+. ...+|.++|||++|+  
T Consensus         5 ~~~kAav~~~~--g~~----l~i~--evp~P-~p~~-~eVLVkv~a~gic~sD~~~~~G~~~-~~~~p~v~GhE~~G~V~   73 (197)
T d2fzwa1           5 IKCKAAVAWEA--GKP----LSIE--EIEVA-PPKA-HEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGIVE   73 (197)
T ss_dssp             EEEEEEEBCST--TSC----CEEE--EEEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTCCT-TCCSSBCCCCEEEEEEE
T ss_pred             eEEEEEEEccC--CCC----CEEE--EEECC-CCCC-CEEEEEEEEecCCCCcHHHHcCCcc-cccccccCCcceeeEEE
Confidence            78999999988  777    4555  56666 4478 9999999999999999999999654 346789999999999  


Q ss_pred             ---eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEecC
Q 037444           86 ---LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLVTA  111 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v~~  111 (339)
                         ++++.+++||+|...                                                   |+|+||+++++
T Consensus        74 ~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~  153 (197)
T d2fzwa1          74 SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVAD  153 (197)
T ss_dssp             EECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             eecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEech
Confidence               889999999999752                                                   57999999999


Q ss_pred             ccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEE
Q 037444          112 PQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVS  158 (339)
Q Consensus       112 ~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~  158 (339)
                      .. ++++ |++++++ +++++++++.+++.++.....-+.+++|||+
T Consensus       154 ~~-~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         154 IS-VAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             GG-EEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HH-EEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            98 9999 9997665 6888999999999998665556788999884

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=5.4e-24  Score=164.75  Aligned_cols=135  Identities=10%  Similarity=0.049  Sum_probs=112.3

Q ss_pred             ceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe-----
Q 037444           11 KRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI-----   85 (339)
Q Consensus        11 ~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~-----   85 (339)
                      +.++++++  |+|  +.|++++  .|.|. +++ +||+|||++++||++|++.+.|.+. ....|.++|||++|+     
T Consensus         2 ~~i~~~~~--G~p--e~l~~~e--~~~P~-p~~-~eVlVkv~a~~in~~D~~~~~G~~~-~~~~p~~~G~e~~G~V~~vG   72 (147)
T d1qora1           2 TRIEFHKH--GGP--EVLQAVE--FTPAD-PAE-NEIQVENKAIGINFIDTYIRSGLYP-PPSLPSGLGTEAAGIVSKVG   72 (147)
T ss_dssp             EEEEBSSC--CSG--GGCEEEE--CCCCC-CCT-TEEEEEEEEEECCHHHHHHHHTSSC-CSSSSBCCCSCEEEEEEEEC
T ss_pred             eEEEEccc--CCC--ceeEEEE--ecCCC-CCC-CEEEEEEEEecccceeeeeecCCCC-CCcceeeeccccccceeeee
Confidence            46788888  999  5677765  55553 478 9999999999999999999999764 345688999999999     


Q ss_pred             eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccc-cccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444           86 LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSY-YTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 ~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                      +++++|++||||+..    |+|+||++++++. ++++ |++++++. ++++++....++++++.+ .++++|++|||
T Consensus        73 ~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~-~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          73 SGVKHIKAGDRVVYAQSALGAYSSVHNIIADK-AAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TTCCSCCTTCEEEESCCSSCCSBSEEEEEGGG-EEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             eecccccccceeeeeccccccceeEEEEehHH-eEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            789999999999743    7899999999999 9999 99976653 345677888888888855 68999999998

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.91  E-value=1.3e-23  Score=168.02  Aligned_cols=172  Identities=19%  Similarity=0.211  Sum_probs=134.5

Q ss_pred             CccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeee
Q 037444          124 PLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAF  202 (339)
Q Consensus       124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~  202 (339)
                      |++ ++|.++++++|||+++.+.+++++|++|+|+|+ |++|++++++++..|+ +|+++++++++++.++ ++|+++++
T Consensus         2 Ple-~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i   78 (176)
T d2jhfa2           2 PLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECV   78 (176)
T ss_dssp             CHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEE
T ss_pred             CHH-HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEE
Confidence            355 689999999999999989999999999999998 8999999999999986 9999999999999999 99999998


Q ss_pred             eCCChhh-HHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccce
Q 037444          203 NYKEEPD-LDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       203 ~~~~~~~-~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      ++.+.++ ..+.++...++|+|++||++|.. .++.++.+++++|..+.++.....    .........++.+++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs  154 (176)
T d2jhfa2          79 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGA  154 (176)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEEC
T ss_pred             ecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEE
Confidence            8754324 44444455555999999999975 778899999997555555443221    11122334566789999998


Q ss_pred             ecccccchhHHHHHHHHHHHHcCC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      ...++.  .+++++++++++.+|+
T Consensus       155 ~~G~~~--~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         155 IFGGFK--SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             SGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EEeCCC--HHHHHHHHHHHHHCcC
Confidence            766542  2667889999999885

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=7.2e-24  Score=168.71  Aligned_cols=134  Identities=15%  Similarity=0.068  Sum_probs=108.9

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++++.  |+|    ++++  ++|.|. +++ +||||||+++|||++|++.+.+.......+|.++|||++|+    
T Consensus         1 MkA~v~~~~--g~p----l~i~--~v~~P~-~~~-~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~v   70 (171)
T d1rjwa1           1 MKAAVVEQF--KEP----LKIK--EVEKPT-ISY-GEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEV   70 (171)
T ss_dssp             CEEEEBSST--TSC----CEEE--ECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEE
T ss_pred             CeEEEEecC--CCC----cEEE--EeECCC-CCC-CeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEe
Confidence            799999998  766    4665  466663 478 99999999999999999988876655667899999999999    


Q ss_pred             -eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccccccC
Q 037444           86 -LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILG  133 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~  133 (339)
                       ++++.+++||||+..                               |+|+||+++++++ ++++ |+++++  ++|++ 
T Consensus        71 G~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~-~~~i-P~~~~~--e~A~l-  145 (171)
T d1rjwa1          71 GPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADY-VVKI-PDNTII--EVQPL-  145 (171)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGG-CEEC-CTTCCE--EEEEG-
T ss_pred             cccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHH-EEEC-CCCCCH--HHHHH-
Confidence             788999999999742                               6899999999998 9999 999544  55555 


Q ss_pred             chhhhHHHHHHHhcCCCCCCEEEEEcC
Q 037444          134 MPGVTAYAGLYEVCSPKKGEYVYVSAA  160 (339)
Q Consensus       134 ~~~~tA~~~l~~~~~~~~g~~vlI~ga  160 (339)
                      ....++++.+. .+.+ +|++|||+|.
T Consensus       146 ~~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         146 EKINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             GGHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             HHHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            34567777763 3555 5999999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.91  E-value=1.8e-24  Score=176.75  Aligned_cols=138  Identities=14%  Similarity=0.135  Sum_probs=114.8

Q ss_pred             cccccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeE
Q 037444            4 EQEAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKF   83 (339)
Q Consensus         4 ~~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~   83 (339)
                      +..+|+|||+++++.  ++|    +++++  +|.|. +++ +||||||.++|||++|++.+.|.+.  ..+|.++|||++
T Consensus         3 ~~~~~~~KAaV~~~~--g~p----l~i~e--vp~P~-p~~-geVlVkv~a~gic~sD~~~~~G~~~--~~~P~v~GHE~~   70 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKT--GSP----LCIEE--IEVSP-PKA-CEVRIQVIATCVCPTDINATDPKKK--ALFPVVLGHECA   70 (202)
T ss_dssp             TTSCEEEEEEEBCST--TSC----CEEEE--EEECC-CCT-TEEEEEEEEEECCHHHHHTTCTTSC--CCSSBCCCCEEE
T ss_pred             CCCeEEEEEEEEccC--CCC----CEEEE--EECCC-CCC-CEEEEEEEEEEEeccccceeeeecc--cccccccccccc
Confidence            345789999999998  777    46654  55563 478 9999999999999999999998664  456899999999


Q ss_pred             Ee-----eCCCCCCCCCEEEec-------------------------------------------------------cce
Q 037444           84 WI-----LHIQNYAKDDLVWGS-------------------------------------------------------TGW  103 (339)
Q Consensus        84 G~-----~~v~~~~~Gd~V~~~-------------------------------------------------------g~~  103 (339)
                      |+     ++++++++||||++.                                                       |+|
T Consensus        71 G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~f  150 (202)
T d1e3ia1          71 GIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSF  150 (202)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCS
T ss_pred             eEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCc
Confidence            99     789999999999752                                                       579


Q ss_pred             eeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444          104 EEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus       104 ~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      +||+++++.. ++++ |++++++ .++++.+++.+++.++..   +++|++|.|+.
T Consensus       151 aey~~v~~~~-l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~  200 (202)
T d1e3ia1         151 SQYTVVSEAN-LARV-DDEFDLD-LLVTHALPFESINDAIDL---MKEGKSIRTIL  200 (202)
T ss_dssp             BSEEEEEGGG-EEEC-CTTSCGG-GGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred             eEEEEEehhh-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence            9999999998 9999 9997665 577888888999988833   56899988764

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=6.9e-27  Score=187.38  Aligned_cols=153  Identities=16%  Similarity=0.128  Sum_probs=127.5

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC---------CCCCCCCC
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP---------SFVDSFHP   78 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~---------~~~~p~~~   78 (339)
                      .++||++++++  |+|+ +.++++..++|.|. +++ +||||||++++||++|++.+.|....         ...+|.++
T Consensus         2 ~t~kA~v~~~~--G~p~-~~l~l~~~~~p~p~-~~~-~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~   76 (175)
T d1gu7a1           2 ITAQAVLYTQH--GEPK-DVLFTQSFEIDDDN-LAP-NEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC   76 (175)
T ss_dssp             EEEEEEEESSC--SCHH-HHCEEEEEEECTTS-CCT-TEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred             ceeEEEEEccC--CCcc-cccEEEEEECCCCC-CCc-CEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccc
Confidence            68899999998  8886 66788888888884 488 99999999999999999999886432         12457789


Q ss_pred             CCeeEEe-----eCCCCCCCCCEEEec----cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHH-hcC
Q 037444           79 GELKFWI-----LHIQNYAKDDLVWGS----TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYE-VCS  148 (339)
Q Consensus        79 G~e~~G~-----~~v~~~~~Gd~V~~~----g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~-~~~  148 (339)
                      |+|++|+     .+++.++.||+|+..    |+|+||+++++++ ++++ |++  ++ .+++++..++|||+++.. ..+
T Consensus        77 G~e~~g~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~-~~~i-P~~--~~-~~~a~~~~~~ta~~~l~~~~~~  151 (175)
T d1gu7a1          77 GNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDD-FIKL-PNP--AQ-SKANGKPNGLTDAKSIETLYDG  151 (175)
T ss_dssp             CSCCEEEEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGG-EEEE-CCH--HH-HHHTTCSCCCCCCCCEEEECCS
T ss_pred             ccccccccccccccccccccccceeccccccccccceeeehhhh-ccCC-Ccc--ch-hhhhccchHHHHHHHHHHHhcC
Confidence            9999999     678889999999865    7899999999999 9999 997  55 444556677899988754 367


Q ss_pred             CCCCCEEEEEc-CCchHHHHHHH
Q 037444          149 PKKGEYVYVSA-ASGAVGQLVGQ  170 (339)
Q Consensus       149 ~~~g~~vlI~g-a~g~~G~~ai~  170 (339)
                      +++|++|||+| |+|++|++++|
T Consensus       152 ~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         152 TKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             SSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             CCCCCEEEEECccchhhhheEEe
Confidence            99999999998 55789998876

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=8.5e-25  Score=172.17  Aligned_cols=141  Identities=24%  Similarity=0.314  Sum_probs=116.8

Q ss_pred             hhhhHHH---HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHH
Q 037444          135 PGVTAYA---GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLD  211 (339)
Q Consensus       135 ~~~tA~~---~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  211 (339)
                      ++.|||.   +|.+.+...++++|||+||+|++|.+++|+||.+|++|+++++++++.+.++ ++|+++++++++   ..
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~---~~   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED---VY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH---HC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc---hh
Confidence            4567764   4555566778999999999999999999999999999999999999999999 999999997742   22


Q ss_pred             HHHHHhCCC-CccEEEECCChhhHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceeccc
Q 037444          212 AALKRCFPQ-GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGD  284 (339)
Q Consensus       212 ~~v~~~~~g-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
                      ......+.+ ++|+|||++|++.+..++++|+++|+++.+|...+.     ..+.+...++.|++++.|+....
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~  148 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVY  148 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSS
T ss_pred             chhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCC
Confidence            222333444 999999999999999999999999999999986653     34567888999999999976544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.90  E-value=3e-23  Score=165.85  Aligned_cols=169  Identities=18%  Similarity=0.182  Sum_probs=135.5

Q ss_pred             ccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeee
Q 037444          125 LSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFN  203 (339)
Q Consensus       125 ~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~  203 (339)
                      ++ ++|.+.+++.|+|+++.+.+++++|++|+|+|+ |++|+.++++++..|+ +|+++++++++++.++ ++|+++++|
T Consensus         3 ~e-~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in   79 (175)
T d1cdoa2           3 LD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVN   79 (175)
T ss_dssp             HH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEEC
T ss_pred             HH-HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEc
Confidence            44 688999999999999988899999999999996 9999999999999987 8999999999999999 999999999


Q ss_pred             CCChhhHHHHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEE-EecccccCCCCCccccchHHHHhccccccce
Q 037444          204 YKEEPDLDAALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAV-CGMISQYNLEKPEGVHNLEQLIGKRIRLEGF  280 (339)
Q Consensus       204 ~~~~~~~~~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
                      +.++++..+.++..+.+ |+|++||++|+ ..+..++.+++++|.++. .+....      .........+.++.++.|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~------~~~~~~~~~~~~~~~i~Gs  153 (175)
T d1cdoa2          80 PNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL------HDVATRPIQLIAGRTWKGS  153 (175)
T ss_dssp             GGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS------SCEEECHHHHHTTCEEEEC
T ss_pred             CCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC------cccCccHHHHHCCcEEEEE
Confidence            87652455666666555 99999999997 477888888888755544 444322      1233455666788899988


Q ss_pred             ecccccchhHHHHHHHHHHHHcCC
Q 037444          281 LAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       281 ~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      ..+++.  .++++.++++++++|+
T Consensus       154 ~~G~~~--~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         154 MFGGFK--GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             SGGGCC--HHHHHHHHHHHHHTTS
T ss_pred             EEeCCc--HHHHHHHHHHHHHcCC
Confidence            766542  3678999999999885

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.1e-22  Score=164.48  Aligned_cols=168  Identities=20%  Similarity=0.179  Sum_probs=136.0

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      +.++|..++.|||+++ +.+++++|++|||+|+ |++|++++++|+.+|+ +|++++.++++++.++ ++|+++++++.+
T Consensus         3 d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~   79 (195)
T d1kola2           3 DLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLD   79 (195)
T ss_dssp             HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSS
T ss_pred             hHHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCC
Confidence            4678899999999998 6799999999999986 9999999999999998 8999999999999999 999999999988


Q ss_pred             hhhHHHHHHHhCCC-CccEEEECCCh----------------hhHHHHHHhhccCCEEEEEecccccCCCC-------Cc
Q 037444          207 EPDLDAALKRCFPQ-GIDIYFENVGG----------------KMLDAVLLNMRLRGRIAVCGMISQYNLEK-------PE  262 (339)
Q Consensus       207 ~~~~~~~v~~~~~g-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-------~~  262 (339)
                      + ++.+++.+++++ ++|++||++|.                ..++.++++++++|+++.+|.+.......       ..
T Consensus        80 ~-~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~  158 (195)
T d1kola2          80 T-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGS  158 (195)
T ss_dssp             S-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTC
T ss_pred             c-CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCc
Confidence            7 999999999988 99999999983                37999999999999999999754431100       01


Q ss_pred             cccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCC
Q 037444          263 GVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGK  304 (339)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~  304 (339)
                      .+..+..++.|++++.+...     ..++.++++++++.+++
T Consensus       159 ~~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         159 LSIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred             eeeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence            12334455667776543222     22566788888888764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.89  E-value=7.3e-23  Score=163.09  Aligned_cols=166  Identities=17%  Similarity=0.149  Sum_probs=131.7

Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCC
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKE  206 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~  206 (339)
                      .+|.+++.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++.++++++.++ ++|+++++|+++
T Consensus         6 ~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~   83 (176)
T d1d1ta2           6 KVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKD   83 (176)
T ss_dssp             HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGG
T ss_pred             HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECccc
Confidence            688999999999999988899999999999996 9999999999999996 8999999999999999 999999999876


Q ss_pred             hhhHHHHHHHhCCC-CccEEEECCChh-hHHHHHHhhccC-CEEEEEecccccCCCCCccccchHHHHhccccccceecc
Q 037444          207 EPDLDAALKRCFPQ-GIDIYFENVGGK-MLDAVLLNMRLR-GRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAG  283 (339)
Q Consensus       207 ~~~~~~~v~~~~~g-~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (339)
                      .++..+.+.+.+.+ |+|++||++|+. .+..++..+.++ |+++.+|.+...    .....+.. .+.++.++.|+..+
T Consensus        84 ~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~~-~~~~~~~i~Gs~~G  158 (176)
T d1d1ta2          84 STKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDPM-LLFTGRTWKGCVFG  158 (176)
T ss_dssp             CSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECTH-HHHTTCEEEECSGG
T ss_pred             cchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCHH-HHhCCCEEEEEEEe
Confidence            52345666666666 999999999975 677888877765 999999875432    11222233 34467888888766


Q ss_pred             cccchhHHHHHHHHHHHHc
Q 037444          284 DYYHLYPKFLELVIPAIRE  302 (339)
Q Consensus       284 ~~~~~~~~~l~~~~~~l~~  302 (339)
                      +..  .++++.++++++.+
T Consensus       159 ~~~--~~~dip~li~~~~~  175 (176)
T d1d1ta2         159 GLK--SRDDVPKLVTEFLA  175 (176)
T ss_dssp             GCC--HHHHHHHHHHHHTT
T ss_pred             CCC--cHHHHHHHHHHHhC
Confidence            542  25667777766543

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.89  E-value=5.9e-23  Score=165.84  Aligned_cols=134  Identities=15%  Similarity=0.062  Sum_probs=106.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      ++|+|+++.+.  ++|    |++++  +|.| .+++ +||||||.++|||++|++.+.|.+.  .++|+++|||++|+  
T Consensus         2 k~~~Aav~~~~--g~~----l~l~~--v~~P-~p~~-geVlVkv~a~gic~sD~~~~~G~~~--~~~P~i~GHE~~G~V~   69 (194)
T d1f8fa1           2 KDIIAAVTPCK--GAD----FELQA--LKIR-QPQG-DEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIE   69 (194)
T ss_dssp             EEEEEEEBCST--TCC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEE
T ss_pred             ceeEEEEEcCC--CCC----cEEEE--eeCC-CCCC-CEEEEEEEEEEecCchHhhhhhccc--ccCCcccccceEEEee
Confidence            57899999887  666    56655  5556 3488 9999999999999999999998764  45799999999999  


Q ss_pred             ---eCCCCCCCCCEEEec----------------------------------------------------cceeeEEEec
Q 037444           86 ---LHIQNYAKDDLVWGS----------------------------------------------------TGWEEYSLVT  110 (339)
Q Consensus        86 ---~~v~~~~~Gd~V~~~----------------------------------------------------g~~~~~~~v~  110 (339)
                         +++++|++||||...                                                    |+|+||++++
T Consensus        70 ~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~  149 (194)
T d1f8fa1          70 AIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSR  149 (194)
T ss_dssp             EECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEE
T ss_pred             ecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEe
Confidence               789999999999641                                                    3578888888


Q ss_pred             CccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 037444          111 APQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGS  182 (339)
Q Consensus       111 ~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~  182 (339)
                      +.. ++++ |++++.+                          +.+++.| .|++|++++|+|+.+|++.++.
T Consensus       150 ~~~-~~~i-p~~i~~~--------------------------~~~~i~g-~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         150 ENN-TVKV-TKDFPFD--------------------------QLVKFYA-FDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             GGG-EEEE-CTTCCGG--------------------------GGEEEEE-GGGHHHHHHHHHHTSCSEEEEE
T ss_pred             hHH-EEEC-CCCCCcc--------------------------cEEEEeC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            887 8888 8774432                          2244455 5999999999999999965443

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=8.4e-23  Score=157.11  Aligned_cols=123  Identities=9%  Similarity=-0.051  Sum_probs=101.7

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe---e
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI---L   86 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~---~   86 (339)
                      |||+++.++  +++  .  .++..+++.| .+++ +||+|||+|+|||++|.....|.+.....+|.++|+|++|+   .
T Consensus         1 MkA~v~~~~--~~~--~--~l~i~~v~~p-~~~~-geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~   72 (146)
T d1o89a1           1 LQALLLEQQ--DGK--T--LASVQTLDES-RLPE-GDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTS   72 (146)
T ss_dssp             CEEEEEECC-------C--EEEEEECCGG-GSCS-CSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEE
T ss_pred             CeEEEEEcC--CCc--e--EEEEEEcCCC-CCCC-CEEEEEEeeccCccceeeEEEeecccccccceeccccccccceee
Confidence            799999998  777  3  3444556666 4478 99999999999999999999997765567789999999999   6


Q ss_pred             CCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHH
Q 037444           87 HIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGL  143 (339)
Q Consensus        87 ~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l  143 (339)
                      +...+++||+|+..         |+|+||++++++. ++++ |+++++. ++|++++++.||+.++
T Consensus        73 ~~~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~-vv~l-P~~ls~~-eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          73 EDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDW-LVAM-PQGQAAK-EISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CSTTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGG-CEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred             ccCCccceeeEEeecccceecCCCcceeeeeeeeee-EEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence            67789999999863         7899999999999 9999 9996665 7889999988887665

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=6.4e-23  Score=165.08  Aligned_cols=140  Identities=9%  Similarity=-0.123  Sum_probs=112.0

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      .|.++||+++.+.  +..  ..+++.+.+   |.++++ +||||||.++|||++|++.+.|.+. ...+|+++|||++|+
T Consensus         3 ~P~~~ka~~~~~~--~~~--~~~~~~~~~---p~p~~~-~eVlVkv~a~giC~sDl~~~~g~~~-~~~~P~i~GHE~~G~   73 (192)
T d1piwa1           3 YPEKFEGIAIQSH--EDW--KNPKKTKYD---PKPFYD-HDIDIKIEACGVCGSDIHCAAGHWG-NMKMPLVVGHEIVGK   73 (192)
T ss_dssp             TTTCEEEEEECCS--SST--TSCEEEEEC---CCCCCT-TEEEEEEEEEEECHHHHHHHTTTTS-CCCSSEECCCCEEEE
T ss_pred             CCceeEEEEEeCC--CcC--CcceEeecc---CCCCCC-CeEEEEEeeeCCCcchHHHHcCCCC-CCCCCcCcccccccc
Confidence            5789999999886  444  445565543   225588 9999999999999999999998664 346789999999999


Q ss_pred             -----eCC-CCCCCCCEEEe--------------------------------------ccceeeEEEecCccceeeccCC
Q 037444           86 -----LHI-QNYAKDDLVWG--------------------------------------STGWEEYSLVTAPQLLIKIQHT  121 (339)
Q Consensus        86 -----~~v-~~~~~Gd~V~~--------------------------------------~g~~~~~~~v~~~~~~~~i~p~  121 (339)
                           +++ +.+++||||..                                      .|+|+||+++++.. ++++ |+
T Consensus        74 Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~-~~~i-P~  151 (192)
T d1piwa1          74 VVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHF-VVPI-PE  151 (192)
T ss_dssp             EEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGG-EEEC-CT
T ss_pred             hhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHH-eEEC-CC
Confidence                 455 66999999952                                      16899999999998 9999 99


Q ss_pred             CCCccccccccCch-hhhHHHHHHHhcCCCCCCEEEEEc
Q 037444          122 DVPLSYYTGILGMP-GVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus       122 ~~~~~~~aa~l~~~-~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      ++++  +.|++..+ +.+||+++ +.+++++|++|+|..
T Consensus       152 ~l~~--e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         152 NIWV--ETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD  187 (192)
T ss_dssp             TCCE--EEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred             CCCH--HHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence            9554  55666665 67999999 579999999999864

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.88  E-value=1.4e-22  Score=162.05  Aligned_cols=134  Identities=18%  Similarity=0.100  Sum_probs=105.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCC-------CCCCCCCCCCCee
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDR-------PSFVDSFHPGELK   82 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~-------~~~~~p~~~G~e~   82 (339)
                      |||++++++  |+|    +++++  +|.|. +++ +||+|||.++|||++|++.+.|.+.       ....+|+++|||+
T Consensus         1 MKA~~~~~~--G~p----l~i~d--v~~P~-p~~-~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~   70 (177)
T d1jvba1           1 MRAVRLVEI--GKP----LSLQE--IGVPK-PKG-PQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI   70 (177)
T ss_dssp             CEEEEECST--TSC----CEEEE--CCCCC-CCT-TCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEE
T ss_pred             CeEEEEEeC--CCC----CEEEE--eeCCC-CCC-CEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceE
Confidence            799999998  877    46654  56663 478 9999999999999999999988643       2346789999999


Q ss_pred             EEe-----eCCCCCCCCCEEEec------------------------------cceeeEEEecCccceeeccCCCCCccc
Q 037444           83 FWI-----LHIQNYAKDDLVWGS------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSY  127 (339)
Q Consensus        83 ~G~-----~~v~~~~~Gd~V~~~------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~  127 (339)
                      +|+     +++++|++||||.+.                              |+|+||+++++...++++ |+..+.. 
T Consensus        71 ~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~~~~~-  148 (177)
T d1jvba1          71 AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRVKPMI-  148 (177)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCCCC-
T ss_pred             EEEEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCCChHH-
Confidence            999     778899999999753                              689999999876636676 6653332 


Q ss_pred             cccccCchhhhHHHHHHHhcCCCCCCEEEE
Q 037444          128 YTGILGMPGVTAYAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI  157 (339)
                      .++.+..++.+|++++ +..++ .|++|||
T Consensus       149 ~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         149 TKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            3444467889999998 55666 5899997

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=1.5e-22  Score=161.59  Aligned_cols=133  Identities=11%  Similarity=0.071  Sum_probs=106.6

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      |++++||+++.+.  ++|    +++++  +|.|. +++ +||||||.++|||++|++.+.|.+. ..++|+++|||++|+
T Consensus         1 m~~k~kA~v~~~~--~~p----l~i~e--v~~P~-~~~-~evlVkv~a~gIC~sD~~~~~G~~~-~~~~P~vlGHE~~G~   69 (184)
T d1vj0a1           1 MGLKAHAMVLEKF--NQP----LVYKE--FEISD-IPR-GSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGR   69 (184)
T ss_dssp             CCEEEEEEEBCST--TSC----CEEEE--EEECC-CCT-TCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEE
T ss_pred             CCceEEEEEEecC--CCC----cEEEE--eeCCC-CCC-CEEEEEEEEECCCCCchhheeccCC-ccccccccceeeeee
Confidence            6788999999998  766    56654  55563 478 9999999999999999999998764 346799999999999


Q ss_pred             -----eCC-----CCCCCCCEEEe---------------------------------------ccceeeEEEec-Cccce
Q 037444           86 -----LHI-----QNYAKDDLVWG---------------------------------------STGWEEYSLVT-APQLL  115 (339)
Q Consensus        86 -----~~v-----~~~~~Gd~V~~---------------------------------------~g~~~~~~~v~-~~~~~  115 (339)
                           +++     ..+++||+|..                                       .|+|+||++++ +.+ +
T Consensus        70 V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~-v  148 (184)
T d1vj0a1          70 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD-V  148 (184)
T ss_dssp             EEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCC-E
T ss_pred             eeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHc-E
Confidence                 444     35789999974                                       15889999996 567 9


Q ss_pred             eeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444          116 IKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus       116 ~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      +++ |++++.  +     .++.+|++++ +.+++++|++|||+-
T Consensus       149 ~~i-p~~l~~--~-----~pl~~A~~a~-~~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         149 LKV-SEKITH--R-----LPLKEANKAL-ELMESREALKVILYP  183 (184)
T ss_dssp             EEE-CTTCCE--E-----EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred             EEC-CCCCCH--H-----HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence            999 999443  2     2456889998 668999999999973

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=1.2e-24  Score=171.14  Aligned_cols=145  Identities=14%  Similarity=0.041  Sum_probs=118.7

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      .++||+++.+.  +++  ..+++++  ++.|+ +++ |||||||+|+|||++|++.+.|.+.....+|.++|+|++|+  
T Consensus         2 ~~~ka~~~~~~--g~~--~~l~~~~--v~~p~-l~~-~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~   73 (162)
T d1tt7a1           2 TLFQALQAEKN--ADD--VSVHVKT--ISTED-LPK-DGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVV   73 (162)
T ss_dssp             CEEEEEEECCG--GGS--CCCEEEE--EESSS-SCS-SSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEE
T ss_pred             CcEEEEEEEec--CCC--eEEEEEE--cCCCC-CCC-CEEEEEEEEecccchhhheeeecccccccceeeeeeecccccc
Confidence            46899999998  665  4566655  55553 467 99999999999999999999987765556788999999999  


Q ss_pred             -eCCCCCCCCCEEEec---------cceeeEEEecCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEE
Q 037444           86 -LHIQNYAKDDLVWGS---------TGWEEYSLVTAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYV  155 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------g~~~~~~~v~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~v  155 (339)
                       +.++++++||+|+..         |+|+||+.++++. ++++ |++++.. +||+++..++|||.++.. .+...+++|
T Consensus        74 ~~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~-l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~~~~~~~~V  149 (162)
T d1tt7a1          74 SSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDW-LVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-ETPGALKDI  149 (162)
T ss_dssp             ECSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGG-EEEC-CTTCCHH-HHHHSCSTTSEEEEECST-THHHHHHHT
T ss_pred             cccccccccceeeEeeeccceeccccccceEEEecHHH-EEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-cCCCCCCEE
Confidence             678899999999864         7999999999999 9999 9996665 688999999999987633 344555789


Q ss_pred             EEEcCCchH
Q 037444          156 YVSAASGAV  164 (339)
Q Consensus       156 lI~ga~g~~  164 (339)
                      ||+|++|++
T Consensus       150 li~ga~G~v  158 (162)
T d1tt7a1         150 LQNRIQGRV  158 (162)
T ss_dssp             TTTCCSSEE
T ss_pred             EEECCcceE
Confidence            999887753

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.9e-22  Score=157.83  Aligned_cols=135  Identities=13%  Similarity=0.030  Sum_probs=105.6

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCC--CCCCCCCCCCeeEEe
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRP--SFVDSFHPGELKFWI   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~--~~~~p~~~G~e~~G~   85 (339)
                      +.+.|++++..       +++++  .++|.|. +++ +||||||.++|||++|++.+.+....  ...+|+++|||++|+
T Consensus         6 p~~~a~V~~gp-------~~l~l--~evp~P~-p~~-~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~   74 (185)
T d1pl8a1           6 PNNLSLVVHGP-------GDLRL--ENYPIPE-PGP-NEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGT   74 (185)
T ss_dssp             CCCEEEEEEET-------TEEEE--EECCCCC-CCT-TEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEE
T ss_pred             CCCEEEEEeCC-------CeEEE--EEeECCC-CCC-CEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeee
Confidence            57789999874       33455  4566674 488 99999999999999999998764321  245688999999999


Q ss_pred             -----eCCCCCCCCCEEEec-------------------------------cceeeEEEecCccceeeccCCCCCccccc
Q 037444           86 -----LHIQNYAKDDLVWGS-------------------------------TGWEEYSLVTAPQLLIKIQHTDVPLSYYT  129 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~-------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~~~~a  129 (339)
                           +++++|++||||+..                               |+|+||+++++++ ++++ |++++.. ++
T Consensus        75 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~-~~~l-P~~~~~~-~a  151 (185)
T d1pl8a1          75 VEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF-CYKL-PDNVKPL-VT  151 (185)
T ss_dssp             EEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGG-EEEC-CTTCGGG-EE
T ss_pred             EEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHH-EEEC-CCCCCHH-HH
Confidence                 788899999999752                               4689999999998 9999 9995543 34


Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      +.  .++.+|++++ +..++++|++|||..
T Consensus       152 a~--~pl~~a~~a~-~~~~~~~G~~VlIg~  178 (185)
T d1pl8a1         152 HR--FPLEKALEAF-ETFKKGLGLKIMLKC  178 (185)
T ss_dssp             EE--EEGGGHHHHH-HHHHTTCCSEEEEEC
T ss_pred             HH--HHHHHHHHHH-HHhCCCCCCEEEEEe
Confidence            33  3556788887 557789999999943

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.85  E-value=3.7e-24  Score=173.69  Aligned_cols=150  Identities=15%  Similarity=0.016  Sum_probs=114.4

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccc----cCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKV----AEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~----~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      +||+++++.       .++++++.+.|...    .+++ +||+|||.++|||++|++.+.|...  ..+|+++|||++|+
T Consensus         2 ~kA~v~~~~-------~~le~~e~~~P~~~~p~~~p~~-~eVlVkv~a~giC~sDl~~~~G~~~--~~~P~v~GHE~~G~   71 (201)
T d1kola1           2 NRGVVYLGS-------GKVEVQKIDYPKMQDPRGKKIE-HGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHEITGE   71 (201)
T ss_dssp             EEEEEEEET-------TEEEEEEECCCCSBCTTSCBCS-SCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCCEEEE
T ss_pred             cEEEEEeCC-------CceEEEEecCCcccCCCCCCCC-CEEEEEEEEEEEcchhhhhhcCCcc--cccceeccceeeee
Confidence            699999885       33566554443211    1367 9999999999999999999998764  46799999999999


Q ss_pred             -----eCCCCCCCCCEEEec----------------------------------------cceeeEEEecCc-cceeecc
Q 037444           86 -----LHIQNYAKDDLVWGS----------------------------------------TGWEEYSLVTAP-QLLIKIQ  119 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~----------------------------------------g~~~~~~~v~~~-~~~~~i~  119 (339)
                           ++|++|++||||...                                        |+|+||++++.. ..+++| 
T Consensus        72 Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~i-  150 (201)
T d1kola1          72 VIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL-  150 (201)
T ss_dssp             EEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEEC-
T ss_pred             eeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEEC-
Confidence                 789999999999631                                        579999999853 239999 


Q ss_pred             CCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q 037444          120 HTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC  177 (339)
Q Consensus       120 p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga  177 (339)
                      |++. ++.+++++..++.++++++ ...+.+.++    +| +|++|++++|+||++||
T Consensus       151 Pd~~-~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         151 PDRD-KAMEKINIAEVVGVQVISL-DDAPRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             SCHH-HHHHTCCHHHHHTEEEECG-GGHHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             CCCC-ChHHHHHHHHHHHHHHHHH-HhCCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            9863 2225677777777888776 334444443    46 59999999999999986

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.85  E-value=1.9e-21  Score=157.96  Aligned_cols=136  Identities=15%  Similarity=0.067  Sum_probs=105.0

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      ..++|||+++++.  ++|    +++++  +|.| .+++ +||||||.++|||++|++.+.|.+.  .++|.++|||++|+
T Consensus         5 ~~~k~KAavl~~~--~~~----l~i~e--v~~P-~p~~-~eVlVkV~a~giC~sDl~~~~G~~~--~~~P~i~GHE~~G~   72 (198)
T d2jhfa1           5 KVIKCKAAVLWEE--KKP----FSIEE--VEVA-PPKA-HEVRIKMVATGICRSDDHVVSGTLV--TPLPVIAGHEAAGI   72 (198)
T ss_dssp             SCEEEEEEEBCST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHHTSSC--CCSSBCCCCSEEEE
T ss_pred             CceEEEEEEEecC--CCC----CEEEE--EECC-CCCC-CEEEEEEEEEecccccceeecCCcc--cccceecccceeEE
Confidence            3578999999987  666    56665  4555 3488 9999999999999999999999765  46789999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEe
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  109 (339)
                           ++++.+++||||++.                                                   |+|+||+++
T Consensus        73 Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v  152 (198)
T d2jhfa1          73 VESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVV  152 (198)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             EEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEe
Confidence                 789999999999652                                                   478999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEc
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSA  159 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~g  159 (339)
                      ++.+ ++++ |++++++ .+++...++.....+.   ..+++|++|+|..
T Consensus       153 ~~~~-~~~~-p~~~~~e-~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         153 DEIS-VAKI-DAAFALD-PLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             EGGG-EEEC-CTTSCCG-GGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             CHHH-eEEC-CCCCCHH-HHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            9999 9999 9986665 3333333333333332   2367899988763

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=3.7e-20  Score=147.16  Aligned_cols=123  Identities=18%  Similarity=0.075  Sum_probs=97.1

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||++....  ++|    |++  .++|.|+ +++ +||||||.++|||++|++.+.|.+.. ..+|+++|||++|+    
T Consensus         1 m~a~~~~~~--~~p----l~i--~ev~~P~-pg~-geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~~v   69 (179)
T d1uufa1           1 IKAVGAYSA--KQP----LEP--MDITRRE-PGP-NDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAV   69 (179)
T ss_dssp             CEEEEBSST--TSC----CEE--EECCCCC-CCT-TEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEE
T ss_pred             CeEEEEccC--CCC----CEE--EEecCCC-CCC-CEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccchhh
Confidence            689998887  777    455  5566674 488 99999999999999999999986543 46799999999999    


Q ss_pred             -eCCCCCCCCCEEEec---------------------------------------cceeeEEEecCccceeeccCCCCCc
Q 037444           86 -LHIQNYAKDDLVWGS---------------------------------------TGWEEYSLVTAPQLLIKIQHTDVPL  125 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------------------------------------g~~~~~~~v~~~~~~~~i~p~~~~~  125 (339)
                       ++|+++++||+|...                                       |+|+||++++++. ++++ |+.  .
T Consensus        70 G~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~-~~~i-p~~--~  145 (179)
T d1uufa1          70 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERY-VLRI-RVA--D  145 (179)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGG-CEEC-CCC--C
T ss_pred             ccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHH-EEEC-CCC--C
Confidence             889999999999521                                       5799999999998 9999 755  2


Q ss_pred             cccccccCchhhhHHHHHHHhcCCC
Q 037444          126 SYYTGILGMPGVTAYAGLYEVCSPK  150 (339)
Q Consensus       126 ~~~aa~l~~~~~tA~~~l~~~~~~~  150 (339)
                        ..+++..++.++++++ ..+.++
T Consensus       146 --~~~~~a~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         146 --IEMIRADQINEAYERM-LRGDVK  167 (179)
T ss_dssp             --EEEECGGGHHHHHHHH-HTTCSS
T ss_pred             --cChhHhchhHHHHHHH-HHhCcc
Confidence              2223345678899988 345554

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.82  E-value=6.1e-21  Score=154.49  Aligned_cols=135  Identities=13%  Similarity=0.060  Sum_probs=102.3

Q ss_pred             cccccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe
Q 037444            6 EAVSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI   85 (339)
Q Consensus         6 ~~~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~   85 (339)
                      ...+|||+++++.  ++|    +++++  +|.| .+++ +||||||.++|||++|++.+.|.++  ..+|+++|||++|+
T Consensus         5 ~~~~~KAav~~~~--g~~----l~i~e--v~~P-~p~~-~eVlVkv~a~gICgsDlh~~~G~~~--~~~P~i~GHE~~G~   72 (198)
T d1p0fa1           5 KDITCKAAVAWEP--HKP----LSLET--ITVA-PPKA-HEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGV   72 (198)
T ss_dssp             SCEEEEEEEBSST--TSC----CEEEE--EEEC-CCCT-TEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEE
T ss_pred             CceEEEEEEEccC--CCC----CEEEE--EECC-CCCC-CEEEEEEEEEEEecccceeeeeccc--cccccccceeeeee
Confidence            3468999999887  666    56665  4555 3477 9999999999999999999998764  46799999999999


Q ss_pred             -----eCCCCCCCCCEEEec---------------------------------------------------cceeeEEEe
Q 037444           86 -----LHIQNYAKDDLVWGS---------------------------------------------------TGWEEYSLV  109 (339)
Q Consensus        86 -----~~v~~~~~Gd~V~~~---------------------------------------------------g~~~~~~~v  109 (339)
                           +++.++++||||.+.                                                   ++|+||+.+
T Consensus        73 Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v  152 (198)
T d1p0fa1          73 VESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVV  152 (198)
T ss_dssp             EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEE
T ss_pred             eeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEe
Confidence                 789999999999852                                                   357999999


Q ss_pred             cCccceeeccCCCCCccccccccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHH
Q 037444          110 TAPQLLIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQ  166 (339)
Q Consensus       110 ~~~~~~~~i~p~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~  166 (339)
                      ++.. ++++ |++++.+. +++..+....          +.++++|||.|+ |++|+
T Consensus       153 ~~~~-~~ki-p~~~~~~~-~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         153 ADIA-VAKI-DPKINVNF-LVSTKLTLDQ----------INKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             ETTS-EEEE-CTTSCGGG-GEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred             cHHH-EEEC-CCCCCHHH-HHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence            9988 9999 98866652 2222222222          233445777774 77664

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.78  E-value=2.7e-18  Score=130.96  Aligned_cols=137  Identities=22%  Similarity=0.326  Sum_probs=106.0

Q ss_pred             cccceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe--
Q 037444            8 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI--   85 (339)
Q Consensus         8 ~~~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~--   85 (339)
                      +++|++++.++++|.|.+++|++++.++|   .+++ ||||||++|.++++..+..+..     ....-++..+.+|+  
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip---~~~~-gevLvk~~~~svDp~~R~~~~~-----~~~g~~~~g~~vg~Vv   72 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKN-GEVLLEALFLSVDPYMRIASKR-----LKEGAVMMGQQVARVV   72 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECC---CCCT-TCEEEEEEEEECCTHHHHHGGG-----SCTTSBCCCCEEEEEE
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECC---CCCC-CEEEEEEEEEeEcccccccccc-----cccCCccccceEEEEE
Confidence            57899999999999998888999887665   3477 9999999999999988765543     22223344566776  


Q ss_pred             -eCCCCCCCCCEEEeccceeeEEEecCccceeeccCCCCCc---cc-cccccCchhhhH-HHHHHHhcCCCCCCEEEE
Q 037444           86 -LHIQNYAKDDLVWGSTGWEEYSLVTAPQLLIKIQHTDVPL---SY-YTGILGMPGVTA-YAGLYEVCSPKKGEYVYV  157 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~g~~~~~~~v~~~~~~~~i~p~~~~~---~~-~aa~l~~~~~tA-~~~l~~~~~~~~g~~vlI  157 (339)
                       ++..+|++||+|++.++|+||.+++... +.++ |++.+.   .. ..+++...++|| |..|..  .-+.|++|++
T Consensus        73 ~S~~~~f~~GD~V~g~~gw~ey~v~~~~~-l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~  146 (147)
T d1v3va1          73 ESKNSAFPAGSIVLAQSGWTTHFISDGKG-LEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT  146 (147)
T ss_dssp             EESCTTSCTTCEEEECCCSBSEEEECSSS-CEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred             EeCCCcccCCCEEEEccCCEeEEEeccce-eeEc-cccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence             8889999999999999999999999998 9999 655332   11 456777888885 446644  3567999986

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.76  E-value=7.9e-19  Score=139.02  Aligned_cols=104  Identities=16%  Similarity=0.063  Sum_probs=82.3

Q ss_pred             cceEEEeeccCCCCCCCCeEEEeecccccccCCCCCeEEEEEEEEeeChhhhhhhcCCCCCCCCCCCCCCCeeEEe----
Q 037444           10 NKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGELKFWI----   85 (339)
Q Consensus        10 ~~a~~~~~~~~~~p~~~~~~~~~~~~p~p~~~~~~~evlv~v~~~~i~~~d~~~~~~~~~~~~~~p~~~G~e~~G~----   85 (339)
                      |||+++.+.       .++++++  +|.|. +++ +||+||++++|||++|++.+.+... ...+|+++|||++|+    
T Consensus         1 MKa~v~~~~-------~~l~i~e--~p~P~-~~~-~eVlIkv~a~gic~sD~~~~~~~~~-~~~~P~i~GhE~~G~V~~v   68 (177)
T d1jqba1           1 MKGFAMLGI-------NKLGWIE--KERPV-AGS-YDAIVRPLAVSPCTSDIHTVFEGAL-GDRKNMILGHEAVGEVVEV   68 (177)
T ss_dssp             CEEEEEEET-------TEEEEEE--CCCCC-CCT-TCEEEEEEEECCCHHHHHHHHHCTT-CCCSSEECCCCEEEEEEEE
T ss_pred             CeEEEEEeC-------CCeEEEE--eeCCC-CCC-CEEEEEEEEEecCCCcccccccCCC-CCCCCccCcceeeEEeeec
Confidence            799999886       3345654  56664 388 9999999999999999987765433 245689999999999    


Q ss_pred             -eCCCCCCCCCEEEec---------------------------------cceeeEEEecCc-cceeeccCCCCCcc
Q 037444           86 -LHIQNYAKDDLVWGS---------------------------------TGWEEYSLVTAP-QLLIKIQHTDVPLS  126 (339)
Q Consensus        86 -~~v~~~~~Gd~V~~~---------------------------------g~~~~~~~v~~~-~~~~~i~p~~~~~~  126 (339)
                       +++++|++||||...                                 |+|+||++++.. ..++++ |++++.+
T Consensus        69 G~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~i-P~~~~~~  143 (177)
T d1jqba1          69 GSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAIL-PKDVDLS  143 (177)
T ss_dssp             CTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEEC-CTTSCGG
T ss_pred             ccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEEC-CCCcchH
Confidence             788999999999731                                 689999999863 238999 9996544

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=4.1e-16  Score=103.98  Aligned_cols=70  Identities=26%  Similarity=0.327  Sum_probs=64.1

Q ss_pred             cccccCchhhhHHHHHHH---hcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          128 YTGILGMPGVTAYAGLYE---VCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       128 ~aa~l~~~~~tA~~~l~~---~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      ++++++.++.|||.+++.   ....+++++|||+||+|++|.+++|+|+.+|++|+++++++++.++++ ++|+
T Consensus         5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA   77 (77)
T d1o8ca2           5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA   77 (77)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred             HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence            788999999999987653   456789999999999999999999999999999999999999999999 8885

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.26  E-value=4.3e-06  Score=63.07  Aligned_cols=98  Identities=18%  Similarity=0.201  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +.-+|+|+|+ |.+|+.+++.|+.+|++|.+.+.+.++++.+++.++.. +....+.. .+.+.++     ..|+||.++
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~-~l~~~~~-----~aDivI~aa  103 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV  103 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh-hHHHhhc-----cCcEEEEee
Confidence            4568999997 99999999999999999999999999999998444432 23333332 5555554     389999987


Q ss_pred             C---hh----hHHHHHHhhccCCEEEEEecccc
Q 037444          230 G---GK----MLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       230 g---~~----~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      =   .+    .-+..++.++++..+|++....+
T Consensus       104 lipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         104 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             ecCCcccCeeecHHHHhhcCCCcEEEEeecCCC
Confidence            4   22    35789999999999999876443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.16  E-value=1.1e-05  Score=63.25  Aligned_cols=80  Identities=19%  Similarity=0.173  Sum_probs=59.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----C-CeeeeCCChhhHHHHHHHhCCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG----F-DDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +.--+|.+++|+||+|++|..+++.+...|++|++++++.++.+.+.+++.    . ....|..+.    +.+.+.. ++
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~-~~   92 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAV-KG   92 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHT-TT
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH----HHHHHHh-cC
Confidence            344589999999999999999999999999999999999988776654442    2 223444432    2333333 36


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|++|++.|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.15  E-value=4.4e-06  Score=68.26  Aligned_cols=80  Identities=11%  Similarity=0.194  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vid  227 (339)
                      +|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.+++++.. ..|-.+.+++.+.+.+...  |++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            57899999999999999999999999999999999999888876777642 3454444244444433322  47999999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.|
T Consensus        84 nAG   86 (242)
T d1ulsa_          84 YAG   86 (242)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            887

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.3e-05  Score=65.49  Aligned_cols=80  Identities=16%  Similarity=0.161  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      -.|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++..+  .+|-.+. +..+++.+.. |++|++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~-g~iDilVn   82 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV-GPVDLLVN   82 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHh-CCceEEEe
Confidence            378999999999999999999999999999999999999887775665433  3454444 3222222222 47999999


Q ss_pred             CCCh
Q 037444          228 NVGG  231 (339)
Q Consensus       228 ~~g~  231 (339)
                      +.|.
T Consensus        83 nAg~   86 (244)
T d1pr9a_          83 NAAV   86 (244)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.05  E-value=6.4e-06  Score=67.27  Aligned_cols=105  Identities=23%  Similarity=0.373  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.+++|+||++++|.++++.+...|++|+++.+++++.+.+.++++..   ...|-.+.++..+.+.++..  |++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5889999999999999999999999999999999999888877677653   23344443234444443322  489999


Q ss_pred             EECCChh-----------h---------------HHHHHHhhc--cCCEEEEEecccc
Q 037444          226 FENVGGK-----------M---------------LDAVLLNMR--LRGRIAVCGMISQ  255 (339)
Q Consensus       226 id~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  255 (339)
                      +++.|..           .               .+.++..|.  .+|++|.+++...
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            9988632           1               233455553  3699999987544

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.04  E-value=1.7e-05  Score=64.59  Aligned_cols=78  Identities=14%  Similarity=0.135  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe--eeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD--AFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++...  ..|-.+. +..+++.+.. |++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGGI-GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHc-CCCeEEEEC
Confidence            58999999999999999999999999999999999998877765665432  2344443 3222222211 489999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        82 Ag   83 (242)
T d1cyda_          82 AA   83 (242)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.03  E-value=9.4e-06  Score=66.25  Aligned_cols=106  Identities=19%  Similarity=0.187  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++...   ..|-.+++++.+.+++...  |++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            68899999999999999999999999999999999999887776775421   2344443244444444332  479999


Q ss_pred             EECCChh-----------hH---------------HHHHHhhc--cCCEEEEEeccccc
Q 037444          226 FENVGGK-----------ML---------------DAVLLNMR--LRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~~  256 (339)
                      +++.|..           .+               +.++..+.  .+|++|.+++....
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  143 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL  143 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence            9998732           11               22334443  36899999876654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.01  E-value=9.1e-06  Score=66.93  Aligned_cols=80  Identities=15%  Similarity=0.244  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.++||+||++++|+++++.+...|++|+++.++.++.+.+.+++|...   ..|-.++++..+.+.+...  |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            58899999999999999999999999999999999998887776887642   2344444244444443322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        84 VnnAg   88 (256)
T d1k2wa_          84 VNNAA   88 (256)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99887

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.3e-05  Score=65.56  Aligned_cols=105  Identities=15%  Similarity=0.152  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee--eeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA--FNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++....  .|-.+.++..+.+.+...  |++|+++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            588999999999999999999999999999999999998888755554222  344443244444443322  4799999


Q ss_pred             ECCCh-h---h-----------------------HHHHHHhhcc-CCEEEEEecccc
Q 037444          227 ENVGG-K---M-----------------------LDAVLLNMRL-RGRIAVCGMISQ  255 (339)
Q Consensus       227 d~~g~-~---~-----------------------~~~~~~~l~~-~G~~v~~g~~~~  255 (339)
                      ++.|. .   .                       .+.++..|++ +|+++.+++...
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~  141 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG  141 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence            98872 1   0                       1224445544 689999886544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.99  E-value=1.1e-05  Score=66.27  Aligned_cols=106  Identities=18%  Similarity=0.178  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.++++..   ...|-.++++..+.+.+...  |++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            6889999999999999999999899999999999999887776577643   12344443244444433322  479999


Q ss_pred             EECCChh-----------h---------------HHHHHHhhc--cCCEEEEEeccccc
Q 037444          226 FENVGGK-----------M---------------LDAVLLNMR--LRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~  256 (339)
                      +++.|..           .               .+.++..++  .+|++|.+++....
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~  142 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL  142 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc
Confidence            9988731           1               122333333  36999999876554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.97  E-value=1.1e-05  Score=67.18  Aligned_cols=80  Identities=24%  Similarity=0.301  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+++|...   ..|-.+.++..+.+.+...  |++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            58999999999999999999999999999999999998877776776531   2344443233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99887

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.96  E-value=2.1e-05  Score=65.15  Aligned_cols=80  Identities=18%  Similarity=0.298  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++..   ..  .|-.+.+++.+.+.+...  |++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            6889999999999999999999999999999999999888777676642   12  244443244444433322  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      +++++.|
T Consensus        85 ~lVnnAG   91 (268)
T d2bgka1          85 IMFGNVG   91 (268)
T ss_dssp             EEEECCC
T ss_pred             eeccccc
Confidence            9999887

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.93  E-value=1.9e-05  Score=64.81  Aligned_cols=106  Identities=17%  Similarity=0.179  Sum_probs=75.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee---eeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA---FNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      +|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.++++....   .|-.+..+..+.+.+...  |++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            688999999999999999999999999999999999988877768876432   233333233333333322  479999


Q ss_pred             EECCChh-----------h---------------HHHHHHhhc-cCCEEEEEeccccc
Q 037444          226 FENVGGK-----------M---------------LDAVLLNMR-LRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~~-----------~---------------~~~~~~~l~-~~G~~v~~g~~~~~  256 (339)
                      +++.|..           .               .+.++..|+ .+|++|.+++....
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~  142 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW  142 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh
Confidence            9998731           1               233455565 47999999876553

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.91  E-value=2.9e-05  Score=59.25  Aligned_cols=104  Identities=14%  Similarity=0.052  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeee-CCCh------------------hhHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFN-YKEE------------------PDLD  211 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~-~~~~------------------~~~~  211 (339)
                      +.-+|+|+|+ |.+|+.|+..|+.+||+|.+.+.+.++++.++ +++...+.. ....                  ....
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            3458999997 99999999999999999999999999999998 887643310 0000                  0112


Q ss_pred             HHHHHhCCCCccEEEECCC---hh----hHHHHHHhhccCCEEEEEecccccC
Q 037444          212 AALKRCFPQGIDIYFENVG---GK----MLDAVLLNMRLRGRIAVCGMISQYN  257 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~~~  257 (339)
                      +.+.+... ..|+||-++=   ..    .-+.+++.++++..+|++....+-+
T Consensus       106 ~~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn  157 (183)
T d1l7da1         106 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGN  157 (183)
T ss_dssp             HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred             HHHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCc
Confidence            22333222 5899998773   22    3468999999999999987654443

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=2.3e-05  Score=64.04  Aligned_cols=106  Identities=15%  Similarity=0.131  Sum_probs=75.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCC--CCccEEE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFP--QGIDIYF  226 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~--g~~d~vi  226 (339)
                      -+|.++||+||++++|.++++.+...|++|+++.++++..+.++ +.+... ..|-.+.++..+.+.+...  |++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            46899999999999999999999999999999999988777766 777642 2344443233333443322  4799999


Q ss_pred             ECCChh-----------h---------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          227 ENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       227 d~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      ++.|..           .               .+.++..|++  +|++|.+++....
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~  139 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL  139 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc
Confidence            988731           1               1234455654  5899998876553

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.89  E-value=2.3e-05  Score=64.24  Aligned_cols=81  Identities=10%  Similarity=0.103  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---ee--eeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DA--FNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++++..   ..  .|-.+.++..+.+.+...  |++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            5889999999999999999999999999999999999888777666541   12  244443233333333322  4799


Q ss_pred             EEEECCCh
Q 037444          224 IYFENVGG  231 (339)
Q Consensus       224 ~vid~~g~  231 (339)
                      +++++.|.
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99998873

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.88  E-value=2.2e-05  Score=63.92  Aligned_cols=81  Identities=10%  Similarity=0.136  Sum_probs=62.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .|.++||+||++++|.++++-+...|++|+++.++.++.+.+.++++...   ..|-+++++..+.+.++..  |++|+.
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            68899999999999999999999999999999999998877776777542   2344444344444444433  479999


Q ss_pred             EECCCh
Q 037444          226 FENVGG  231 (339)
Q Consensus       226 id~~g~  231 (339)
                      +++.|.
T Consensus        84 innAg~   89 (241)
T d2a4ka1          84 AHFAGV   89 (241)
T ss_dssp             EEGGGG
T ss_pred             cccccc
Confidence            998763

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.7e-05  Score=65.94  Aligned_cols=102  Identities=18%  Similarity=0.234  Sum_probs=67.3

Q ss_pred             CCEE-EEEcCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-ee--eeCCChhhHHHHHHHhCC--CC
Q 037444          152 GEYV-YVSAASGAVGQLVGQ-FAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DA--FNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       152 g~~v-lI~ga~g~~G~~ai~-la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      |.+| ||+||++++|+++++ +++..|++|+.++++.++.+.+.+++   +.. .+  .|-.+.++..+.+.++..  |+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            5667 899999999999775 56667999999999999876665444   332 22  344443233322232222  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEecc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +|++|++.|-.           .               .+.++..|+++|+++.+++.
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            99999988731           1               22345566788999988763

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.9e-05  Score=64.40  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhC--CCCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      .|.++||+||++++|...+......|++|+++++++++++.+.++   .|..   ...|..+.++..+.++.+.  .|.+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999988889999999999999887666533   3432   2335555424444444432  2479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+++++.|.
T Consensus        86 dilinnag~   94 (244)
T d1yb1a_          86 SILVNNAGV   94 (244)
T ss_dssp             SEEEECCCC
T ss_pred             ceeEeeccc
Confidence            999999873

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.86  E-value=8e-05  Score=61.09  Aligned_cols=81  Identities=16%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe---eeeCCChhhH---HHHHHHhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD---AFNYKEEPDL---DAALKRCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~---~~~v~~~~~g~  221 (339)
                      +|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|-.+.++.   .+.+.+..++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999999876665433   33322   2344443222   33344445557


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|+++++.|.
T Consensus        85 idilinnag~   94 (258)
T d1ae1a_          85 LNILVNNAGV   94 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             cEEEeccccc
Confidence            9999998873

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4e-05  Score=62.85  Aligned_cols=106  Identities=17%  Similarity=0.153  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC----Ce----eeeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF----DD----AFNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.++||+||++++|.++++.+...|++|+.+.++.++.+.+.+++..    ..    ..|-.+.+++.+.+.+...  |
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999887666545422    11    2344443234444443332  4


Q ss_pred             CccEEEECCChh---hH---------------HHHHHhhcc-----CCEEEEEeccccc
Q 037444          221 GIDIYFENVGGK---ML---------------DAVLLNMRL-----RGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~~---~~---------------~~~~~~l~~-----~G~~v~~g~~~~~  256 (339)
                      ++|+++++.|..   .+               ..++..|.+     +|++|.+++....
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~  140 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL  140 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence            799999999832   11               234444443     4889998876553

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.85  E-value=2.7e-05  Score=64.11  Aligned_cols=80  Identities=18%  Similarity=0.263  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---eeeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD---DAFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+++   |..   ...|-.+++++.+.+.+...  |++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999999999999999999999999999999998877665443   332   12344443234444443322  479


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        84 DilVnnaG   91 (260)
T d1zema1          84 DFLFNNAG   91 (260)
T ss_dssp             CEEEECCC
T ss_pred             Ceehhhhc
Confidence            99999876

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=2.3e-05  Score=63.93  Aligned_cols=79  Identities=16%  Similarity=0.261  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+..+.. .+.|.... +..+.+.+.. +++|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence            6889999999999999999999999999999999999888777444442 33444444 4444444433 3799999987


Q ss_pred             Ch
Q 037444          230 GG  231 (339)
Q Consensus       230 g~  231 (339)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=2.9e-05  Score=63.81  Aligned_cols=81  Identities=25%  Similarity=0.393  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cee----eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-DDA----FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~~v----~~~~~~~~~~~~v~~~~~--g  220 (339)
                      +|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.+++   +. ..+    .|-.++++..+.+.+...  |
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998877654333   32 122    244444244444444332  4


Q ss_pred             CccEEEECCCh
Q 037444          221 GIDIYFENVGG  231 (339)
Q Consensus       221 ~~d~vid~~g~  231 (339)
                      ++|++|++.|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            79999998874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.82  E-value=4.4e-05  Score=62.43  Aligned_cols=104  Identities=18%  Similarity=0.229  Sum_probs=71.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCCe---eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN----KFGFDD---AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+    +.|...   ..|-.+++++.+.+.+...  |+
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887654432    445431   2344444244444443322  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhcc--CCEEEEEeccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMIS  254 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~  254 (339)
                      +|+++++.|..           .               .+.++..|+.  +|++|.+++..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~  144 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT  144 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccch
Confidence            99999998731           1               2335556644  58999987643

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.80  E-value=0.00037  Score=52.40  Aligned_cols=73  Identities=21%  Similarity=0.241  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      -.+.+|||+|+ |.+|..+++.+...|+ +++++.|+.++.+.+.+++|.. +++++   ++.+.+.     .+|+||.|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~---~~~~~l~-----~~Divi~a   91 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFD---ELVDHLA-----RSDVVVSA   91 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGG---GHHHHHH-----TCSEEEEC
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccch---hHHHHhc-----cCCEEEEe
Confidence            47889999997 9999999999888998 7999999988876665588853 44443   4555553     49999999


Q ss_pred             CChh
Q 037444          229 VGGK  232 (339)
Q Consensus       229 ~g~~  232 (339)
                      ++++
T Consensus        92 tss~   95 (159)
T d1gpja2          92 TAAP   95 (159)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            9864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.79  E-value=3.3e-05  Score=64.07  Aligned_cols=80  Identities=18%  Similarity=0.304  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eeeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF--DD----AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~v~~~~~--  219 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+++   +.  ..    ..|-.+.++..+.+.+...  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998877665443   22  11    2244443233333433322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      |++|+++++.|
T Consensus        84 g~iDilvnnAG   94 (272)
T d1xkqa_          84 GKIDVLVNNAG   94 (272)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeCCc
Confidence            47999999876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.79  E-value=3.4e-05  Score=63.47  Aligned_cols=81  Identities=19%  Similarity=0.324  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---eeeeCCChhhHHHHHH---HhCCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD---DAFNYKEEPDLDAALK---RCFPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~v~---~~~~g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.+++   +..   ...|-.+.++..+.+.   +..+|.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998876665443   221   1234444323333333   333457


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|+++++.|.
T Consensus        87 idilvnnAG~   96 (259)
T d1xq1a_          87 LDILINNLGA   96 (259)
T ss_dssp             CSEEEEECCC
T ss_pred             cccccccccc
Confidence            9999998873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.78  E-value=0.00011  Score=60.22  Aligned_cols=106  Identities=14%  Similarity=0.205  Sum_probs=72.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHh---CCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRC---FPQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~---~~g~  221 (339)
                      .|.++||+||++++|.++++.+...|++|+++.+++++.+.+.+++   |.. .  ..|-.++++..+.+.+.   .+++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999998876665443   332 1  23444432333333333   3347


Q ss_pred             ccEEEECCChh-----------hH---------------HHHHHhhc--cCCEEEEEeccccc
Q 037444          222 IDIYFENVGGK-----------ML---------------DAVLLNMR--LRGRIAVCGMISQY  256 (339)
Q Consensus       222 ~d~vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~~  256 (339)
                      +|+++++.|..           .+               +.++..+.  .+|++|.+++....
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  149 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA  149 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc
Confidence            99999988731           11               22444443  36899999875553

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.7e-05  Score=63.93  Aligned_cols=81  Identities=21%  Similarity=0.302  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-e--eeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-D--AFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++.+.+.++   .|.. .  ..|-.++++..+.+.+...  |++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999999999998876655433   3432 1  2344443233333333322  479


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+++++.|.
T Consensus        90 DilvnnAG~   98 (255)
T d1fmca_          90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEeeeCCcC
Confidence            999998873

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.75  E-value=5.4e-05  Score=62.14  Aligned_cols=80  Identities=16%  Similarity=0.214  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC-Cee----eeCCChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF-DDA----FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~-~~v----~~~~~~~~~~~~v~~~~~--g  220 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++   +. ..+    .|-.+++++.+.+.+...  |
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999998876554332   22 122    244444244444443322  4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+++++.|
T Consensus        83 ~iDiLVnnAG   92 (258)
T d1iy8a_          83 RIDGFFNNAG   92 (258)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.74  E-value=9.5e-05  Score=59.69  Aligned_cols=72  Identities=28%  Similarity=0.343  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-eeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-FNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++++..+    +.+...+ .|-++  +.. .+.+.. +++|+++++.
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~--~~~-~~~~~~-g~iD~lVnnA   74 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRK--DLD-LLFEKV-KEVDILVLNA   74 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTT--CHH-HHHHHS-CCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHH--HHH-HHHHHh-CCCcEEEecc
Confidence            5789999999999999999999999999999999876543    4454322 22222  333 333322 4799999988


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      |
T Consensus        75 G   75 (234)
T d1o5ia_          75 G   75 (234)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=4.5e-05  Score=64.04  Aligned_cols=82  Identities=16%  Similarity=0.216  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------CC-e--eeeCCChhhHHHHHHHh
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG--------FD-D--AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g--------~~-~--v~~~~~~~~~~~~v~~~  217 (339)
                      .-+|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+++.        .. .  ..|-.+.+++.+.+.+.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999887665543431        11 1  12434432344444433


Q ss_pred             CC--CCccEEEECCC
Q 037444          218 FP--QGIDIYFENVG  230 (339)
Q Consensus       218 ~~--g~~d~vid~~g  230 (339)
                      ..  |++|+++++.|
T Consensus        89 ~~~~G~iDiLVnnAg  103 (297)
T d1yxma1          89 LDTFGKINFLVNNGG  103 (297)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHhCCeEEEEeecc
Confidence            22  47999999887

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.72  E-value=3.9e-05  Score=63.64  Aligned_cols=80  Identities=19%  Similarity=0.353  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eeeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF--DD----AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~v~~~~~--  219 (339)
                      +|.+++|+||++++|.++++.+...|++|+++.+++++.+.+.+++   |.  ..    ..|-.+.++..+.+.+...  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5889999999999999999999999999999999988876655333   32  11    2344443233333443322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      |++|+++++.|
T Consensus        83 G~iDilVnnAG   93 (274)
T d1xhla_          83 GKIDILVNNAG   93 (274)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCceEEEeecc
Confidence            47999999876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.72  E-value=8.9e-06  Score=66.12  Aligned_cols=100  Identities=13%  Similarity=0.166  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC--h---hhHHHHHHHhCCC-CccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE--E---PDLDAALKRCFPQ-GIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~--~---~~~~~~v~~~~~g-~~d~  224 (339)
                      .|.+|||+||++++|.++++.....|++|+.+.+++.+..      .....+....  .   +.+...+.+..+. ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999999999999999999999999999876543211      1111111111  1   1223333333344 7999


Q ss_pred             EEECCCh-h-----------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          225 YFENVGG-K-----------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       225 vid~~g~-~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      ++++.|. .           .               ...++..++++|+++.+++....
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~  133 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL  133 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc
Confidence            9998862 1           1               12255567889999999876543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.70  E-value=4.5e-05  Score=62.91  Aligned_cols=80  Identities=15%  Similarity=0.291  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CC--Ce----eeeCCChhhHHHHHHHhCC--
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GF--DD----AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~v~~~~~--  219 (339)
                      +|..+||+||++++|.+.++.+...|++|+++.+++++.+.+.+++   +.  ..    ..|-.+.++..+.+.+...  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999998876665433   22  11    2244443233333433322  


Q ss_pred             CCccEEEECCC
Q 037444          220 QGIDIYFENVG  230 (339)
Q Consensus       220 g~~d~vid~~g  230 (339)
                      |++|+++++.|
T Consensus        84 g~iDilvnnAG   94 (264)
T d1spxa_          84 GKLDILVNNAG   94 (264)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEeecccc
Confidence            47999999987

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=0.00026  Score=58.03  Aligned_cols=113  Identities=19%  Similarity=0.290  Sum_probs=77.5

Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH---HhCCCeeeeC
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKN---KFGFDDAFNY  204 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~---~~g~~~v~~~  204 (339)
                      +.+..+--.++ .+ ...++++|++||=.|.  +.|..++.+|+..|  .+|+++..+++..+.+++   .+|....+..
T Consensus        84 ~qiiypkd~~~-Ii-~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~  159 (266)
T d1o54a_          84 TQIVYPKDSSF-IA-MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTI  159 (266)
T ss_dssp             CCCCCHHHHHH-HH-HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred             ccccchHHHHH-HH-HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEE
Confidence            34444433343 33 6689999999999984  55888889999875  599999999998877764   3454222211


Q ss_pred             CChhhHHHHHHHhCCC-CccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          205 KEEPDLDAALKRCFPQ-GIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ... +.    ....+. .+|.|+--...  ..+..+.++|+++|+++.+.
T Consensus       160 ~~~-d~----~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         160 KVR-DI----SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             ECC-CG----GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             Eec-cc----cccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            111 21    112223 78988877765  38899999999999998763

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.69  E-value=0.00014  Score=60.17  Aligned_cols=105  Identities=20%  Similarity=0.273  Sum_probs=70.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH---HhCCCe---eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKN---KFGFDD---AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++. +..+.+.+   +.|.+.   ..|-.+++++.+.+.++..  |+
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999987663 43333321   445432   2344443244444444332  47


Q ss_pred             ccEEEECCChh-----------h---------------HHHHHHhhccCCEEEEEecccc
Q 037444          222 IDIYFENVGGK-----------M---------------LDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       222 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      +|+++.+.|..           .               .+.++..|.++|+.+.+.....
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~  156 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  156 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc
Confidence            99999988632           0               2446667788899888866443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.67  E-value=5.5e-05  Score=61.84  Aligned_cols=81  Identities=14%  Similarity=0.318  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC---eeeeCCChhhHHHHHHHhCC--CCc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD---DAFNYKEEPDLDAALKRCFP--QGI  222 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~v~~~~~--g~~  222 (339)
                      .|..+||+||++++|.++++.+...|++|+++.+++++.+.+.+++   |..   ...|-.+++++.+.+.+...  |++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            4788999999999999999988899999999999998876655443   432   12344444244444443322  489


Q ss_pred             cEEEECCCh
Q 037444          223 DIYFENVGG  231 (339)
Q Consensus       223 d~vid~~g~  231 (339)
                      |+++++.|.
T Consensus        89 Dilvnnag~   97 (251)
T d2c07a1          89 DILVNNAGI   97 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eeeeecccc
Confidence            999998863

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.65  E-value=6.4e-05  Score=61.68  Aligned_cols=79  Identities=18%  Similarity=0.296  Sum_probs=56.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhCC--CCcc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      |..+||+||++++|.++++.+...|++|+++.+++++.+.+.++   .|..   ...|-.+.+++.+.+.+...  |++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            45679999999999999999999999999999998877665433   3432   12344443244444443322  4799


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      +++++.|
T Consensus        82 ilVnnAG   88 (257)
T d2rhca1          82 VLVNNAG   88 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.63  E-value=5e-05  Score=60.29  Aligned_cols=112  Identities=14%  Similarity=0.197  Sum_probs=76.2

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCCh
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEE  207 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~  207 (339)
                      .+..+...|. +| +...+++|++||-+|  ++.|+.++-+|+..|.+|+++...++-.+.+++   ++|.+.+..... 
T Consensus        60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-  134 (215)
T d1jg1a_          60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG-  134 (215)
T ss_dssp             EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred             hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence            3444555554 33 667899999999999  688999999999889899999988765444442   567654332221 


Q ss_pred             hhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                       |..+-.  ...+.||.++-+.+-. .-...++.|+++|+++..
T Consensus       135 -d~~~g~--~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         135 -DGSKGF--PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             -CGGGCC--GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -ccccCC--cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence             111100  1113799999877754 446788999999999864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.63  E-value=5e-05  Score=62.47  Aligned_cols=80  Identities=14%  Similarity=0.142  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhCCC---eeeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN----KFGFD---DAFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++.++.+.+.+    +.|..   ...|-.++++..+.+.+...  |+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998766543322    34543   12344444244444433322  48


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        88 iDilVnnAg   96 (260)
T d1h5qa_          88 ISGLIANAG   96 (260)
T ss_dssp             EEEEEECCC
T ss_pred             CcEeccccc
Confidence            999999886

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.63  E-value=7e-05  Score=62.75  Aligned_cols=81  Identities=11%  Similarity=0.222  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH----hCCC-ee--eeCCChhhHHHHHHHhC--CCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK----FGFD-DA--FNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++.++.+.+.++    .|.. ..  .|-.+.++....+....  .++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            678999999999999999999999999999999998876544333    3432 22  23344323333333322  248


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|+++++.|.
T Consensus       104 iDilvnnAg~  113 (294)
T d1w6ua_         104 PNIVINNAAG  113 (294)
T ss_dssp             CSEEEECCCC
T ss_pred             cchhhhhhhh
Confidence            9999999873

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.59  E-value=0.00023  Score=54.11  Aligned_cols=72  Identities=22%  Similarity=0.174  Sum_probs=56.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      +..++.++.+|+|.|+ |+++.+++..++..|+ ++.++.|+.++.+.+.+.++...+ +...            ...+|
T Consensus        10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~~~D   75 (167)
T d1npya1          10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQQAD   75 (167)
T ss_dssp             HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TCCCS
T ss_pred             HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------ccchh
Confidence            4566678899999996 9999999999999998 899999999998888756665432 2111            12589


Q ss_pred             EEEECCC
Q 037444          224 IYFENVG  230 (339)
Q Consensus       224 ~vid~~g  230 (339)
                      ++|+|+.
T Consensus        76 liINaTp   82 (167)
T d1npya1          76 ILVNVTS   82 (167)
T ss_dssp             EEEECSS
T ss_pred             hheeccc
Confidence            9999876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=97.58  E-value=9.7e-05  Score=60.67  Aligned_cols=81  Identities=20%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE-KVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~-~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +|.++||+||++++|.++++.+...|++|+++.++.+ ..+.+.+   +.|.. .  ..|-.++++..+.+.+...  |+
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999999999999999998899999999998754 3333321   44542 1  2244443233333333322  47


Q ss_pred             ccEEEECCCh
Q 037444          222 IDIYFENVGG  231 (339)
Q Consensus       222 ~d~vid~~g~  231 (339)
                      +|+++++.|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999998873

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.55  E-value=0.00016  Score=58.82  Aligned_cols=105  Identities=15%  Similarity=0.204  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH-H-HHHHHHhCCCe---eeeCCChhhHHHHHHHhCC--CCcc
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK-V-DLLKNKFGFDD---AFNYKEEPDLDAALKRCFP--QGID  223 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~-~-~~~~~~~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d  223 (339)
                      +|.++||+||++++|.++++.+...|++|+++.+++++ . +.++ +.|...   ..|-.+.++..+.+.+...  |++|
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHH-HcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999976543 2 3334 666532   2344444234444433322  4799


Q ss_pred             EEEECCChh-----------hH---------------HHHHHhhcc--CCEEEEEeccccc
Q 037444          224 IYFENVGGK-----------ML---------------DAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       224 ~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      +++++.|..           .+               +.++..++.  +|++|.+++....
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  143 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW  143 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc
Confidence            999988731           11               224444543  5899998876553

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.52  E-value=1.5e-05  Score=64.64  Aligned_cols=99  Identities=16%  Similarity=0.169  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCC--h---hhHHHHHHHhC-CCCccEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKE--E---PDLDAALKRCF-PQGIDIY  225 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~--~---~~~~~~v~~~~-~g~~d~v  225 (339)
                      +.+|||+||++++|.+.++.+...|++|+.+.+++++..      .....+..+.  .   ....+.+.... .+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            457999999999999999999999999999998754311      0111111111  0   01122223322 3489999


Q ss_pred             EECCCh----h--------h---------------HHHHHHhhccCCEEEEEeccccc
Q 037444          226 FENVGG----K--------M---------------LDAVLLNMRLRGRIAVCGMISQY  256 (339)
Q Consensus       226 id~~g~----~--------~---------------~~~~~~~l~~~G~~v~~g~~~~~  256 (339)
                      |++.|.    .        .               .+.++..|+++|+++.+++....
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~  133 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM  133 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc
Confidence            998862    1        1               12355577788999999875543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.51  E-value=0.00011  Score=59.91  Aligned_cols=79  Identities=18%  Similarity=0.160  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC-ee--eeCCChhhH---HHHHHHhCCC-Cc
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFD-DA--FNYKEEPDL---DAALKRCFPQ-GI  222 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~---~~~v~~~~~g-~~  222 (339)
                      ..+|||+||++++|+++++.+...|+  +|+.++++.++.+.+++..+.. ++  +|-.+.+++   .+.+.+..+. ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            37899999999999999888777886  7999999998888777333332 22  244443123   3334333333 69


Q ss_pred             cEEEECCC
Q 037444          223 DIYFENVG  230 (339)
Q Consensus       223 d~vid~~g  230 (339)
                      |+++++.|
T Consensus        83 dilinnAG   90 (250)
T d1yo6a1          83 SLLINNAG   90 (250)
T ss_dssp             CEEEECCC
T ss_pred             EEEEEcCc
Confidence            99999987

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.49  E-value=0.00045  Score=57.35  Aligned_cols=104  Identities=10%  Similarity=0.014  Sum_probs=72.3

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHH
Q 037444          140 YAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       140 ~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      +.-+.+..++++|++||=+|  .|.|-.+..+|+..|++|++++.|+++.+.+++   ..|....+..... ++     .
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~  121 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----E  121 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----G
T ss_pred             HHHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----c
Confidence            33455778999999999998  566777889999999999999999998666542   4455332222111 22     1


Q ss_pred             hCCCCccEEEE-----CCCh-----------hhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFE-----NVGG-----------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ..++.||.|+.     .++.           ..++.+.++|+|+|+++.-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            23458998875     2221           24778999999999998543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.48  E-value=0.00019  Score=58.92  Aligned_cols=107  Identities=17%  Similarity=0.222  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH-HHHHHHHH----HhCCCe---eeeCCChhhHHHHHHHhCC--
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK-EKVDLLKN----KFGFDD---AFNYKEEPDLDAALKRCFP--  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~-~~~~~~~~----~~g~~~---v~~~~~~~~~~~~v~~~~~--  219 (339)
                      -+|.++||+||++++|.++++.+...|++|+++.+++ +..+.+.+    ..|...   ..|-.+.+++.+.+.+...  
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3688999999999999999999999999999999864 44444332    334322   1244443233333333322  


Q ss_pred             CCccEEEECCChh-----------h---------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          220 QGIDIYFENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       220 g~~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      |++|+++++.|..           .               .+.++..+++  +|++|.+++....
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~  146 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL  146 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence            4799999988731           1               1234445544  5899998876554

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.48  E-value=0.00012  Score=58.50  Aligned_cols=108  Identities=10%  Similarity=0.045  Sum_probs=72.3

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-C--eeeeCCChh
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-D--DAFNYKEEP  208 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~--~v~~~~~~~  208 (339)
                      +..+...|. +| +...+++|++||-+|  ++.|+.++.+|+. +.+|+++..+++-.+.+++.+.. .  .++..+.. 
T Consensus        53 ~~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~-  126 (224)
T d1vbfa_          53 TTALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGT-  126 (224)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGG-
T ss_pred             eehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchh-
Confidence            344444454 34 678899999999999  4678888878775 67999999999888888743332 1  22222211 


Q ss_pred             hHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          209 DLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       209 ~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                         .-..  ..+.||.|+-+.+-+ .....++.|+++|++|..
T Consensus       127 ---~g~~--~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         127 ---LGYE--EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             ---GCCG--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ---hcch--hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence               0000  113699998766643 455678999999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.47  E-value=0.00017  Score=58.92  Aligned_cols=77  Identities=16%  Similarity=0.201  Sum_probs=54.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCe---eeeCCChhhHHHHHHHhCC--CCccEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDD---AFNYKEEPDLDAALKRCFP--QGIDIY  225 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~v~~~~~--g~~d~v  225 (339)
                      .+||+||++++|+++++.+...|++|+++.+++++.+.+.++   .|...   ..|-.+.++..+.+.+...  |++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            359999999999999988888999999999999887665433   34321   2344444233333333322  479999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +++.|
T Consensus        83 VnnAG   87 (255)
T d1gega_          83 VNNAG   87 (255)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99886

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00041  Score=52.81  Aligned_cols=104  Identities=11%  Similarity=-0.004  Sum_probs=66.3

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC
Q 037444          140 YAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       140 ~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ..+|.+..-..+|.+|||.|+ |+.+.+++..+..+|++|+++.|+.++.+.+.+.+.....+..... +      +...
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~------~~~~   77 (170)
T d1nyta1           6 LSDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D------ELEG   77 (170)
T ss_dssp             HHHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G------GGTT
T ss_pred             HHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc-c------cccc
Confidence            345645444568899999996 9999999998899999999999999988777645442111111110 1      1111


Q ss_pred             CCccEEEECCChhhH----HHHHHhhccCCEEEEEe
Q 037444          220 QGIDIYFENVGGKML----DAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 g~~d~vid~~g~~~~----~~~~~~l~~~G~~v~~g  251 (339)
                      ..+|++|+|+.....    ..-...+.++..++++-
T Consensus        78 ~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~v  113 (170)
T d1nyta1          78 HEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMF  113 (170)
T ss_dssp             CCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESC
T ss_pred             cccceeecccccCcccCCCCCcHHHhccCcEEEEee
Confidence            369999999863311    11234456666655553

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.44  E-value=0.00015  Score=59.37  Aligned_cols=105  Identities=21%  Similarity=0.280  Sum_probs=68.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHHH---HhCCC-ee--eeCCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLKN---KFGFD-DA--FNYKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~v~~~~~--g  220 (339)
                      -.|.++||+||++++|.+.++.+...|++|++++++ ++..+.+.+   +.|.. ..  .|-.+.++..+.+.+...  |
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999987654 343343332   45553 22  244333233333433322  4


Q ss_pred             CccEEEECCChh--------------------------hHHHHHHhhccCCEEEEEeccc
Q 037444          221 GIDIYFENVGGK--------------------------MLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       221 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ++|+++++.|..                          ..+.++..++++|.++.+....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            799999988732                          0244667777888877776533

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.42  E-value=0.00085  Score=54.66  Aligned_cols=112  Identities=17%  Similarity=0.130  Sum_probs=76.1

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHh----C--CCee-
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKF----G--FDDA-  201 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~----g--~~~v-  201 (339)
                      .+..+--.++  +....+++||++||=.|  .+.|.+++.+|+..|.  +|+.+..+++..+.+++.+    +  .+.+ 
T Consensus        78 qiiypkD~s~--Ii~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~  153 (264)
T d1i9ga_          78 QVIYPKDAAQ--IVHEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR  153 (264)
T ss_dssp             CCCCHHHHHH--HHHHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE
T ss_pred             cccchHHHHH--HHHHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEE
Confidence            3444433333  33568999999999888  5788999999999864  9999999999888877422    1  1222 


Q ss_pred             eeCCChhhHHHHHHHhCCCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          202 FNYKEEPDLDAALKRCFPQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       202 ~~~~~~~~~~~~v~~~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +...   |..+  ..+.++.+|.||--...  ..+..+.+.|+++|+++.+.
T Consensus       154 ~~~~---d~~~--~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         154 LVVS---DLAD--SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             EECS---CGGG--CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             EEec---cccc--ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            1111   1111  01122479988766664  48899999999999998764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=0.00017  Score=59.47  Aligned_cols=44  Identities=30%  Similarity=0.324  Sum_probs=40.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      -+|.++||+||++++|+++++.+...|++|+.+++++++++.+.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV   55 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            46899999999999999999998889999999999999877665

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.41  E-value=0.00053  Score=56.74  Aligned_cols=102  Identities=11%  Similarity=0.025  Sum_probs=71.0

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHh
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      ..+.+..++++|++||=+|  .|.|..++.+|+..|++|++++.|+++.+.+++.   .|...-+..... |+    +. 
T Consensus        52 ~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~-  123 (285)
T d1kpga_          52 DLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ-  123 (285)
T ss_dssp             HHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG-
T ss_pred             HHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc-
Confidence            3455678899999999998  5788899999999999999999999988877632   232211111111 21    11 


Q ss_pred             CCCCccEEEE-----CCChh----hHHHHHHhhccCCEEEEE
Q 037444          218 FPQGIDIYFE-----NVGGK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       218 ~~g~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  250 (339)
                      .++.+|.|+.     .++..    .+..+.+.|+++|+++.-
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            1347888765     33322    567888999999999753

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.40  E-value=0.0002  Score=56.82  Aligned_cols=111  Identities=20%  Similarity=0.231  Sum_probs=73.4

Q ss_pred             cCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHH---hCCCeeeeCCC
Q 037444          132 LGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNK---FGFDDAFNYKE  206 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~  206 (339)
                      +..+...|. .+ +..++++|++||-+|  ++.|..++.+|+..|  .+|+++..+++..+.+++.   .+...+.....
T Consensus        58 i~~P~~~a~-~l-~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~  133 (213)
T d1dl5a1          58 SSQPSLMAL-FM-EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG  133 (213)
T ss_dssp             ECCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred             eccchhhHH-HH-HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC
Confidence            333444444 33 678899999999999  455889999999876  4899999998877777643   33332221111


Q ss_pred             hhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          207 EPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       207 ~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                        +..+..  ...+.||+|+.+.+-. .....++.|+++|+++..
T Consensus       134 --d~~~~~--~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         134 --DGYYGV--PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             --CGGGCC--GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             --chHHcc--ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence              111000  0113699999877643 446788999999999863

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.35  E-value=0.0004  Score=56.21  Aligned_cols=100  Identities=7%  Similarity=0.052  Sum_probs=69.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---C-CCeeeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKF---G-FDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~---g-~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      ...++++|++||=.|+  +.|.++..+|+..|  .+|+++..+++..+.+++.+   + ...+ ..... |+.+.   +.
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~-Di~~~---~~  151 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIADF---IS  151 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTTC---CC
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEe-eeecc---cc
Confidence            4588999999999984  56788888998875  48999999999888877433   2 2222 11111 22211   12


Q ss_pred             CCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ++.+|.||--...  ..+..+.+.|+++|+++.+.
T Consensus       152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         152 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             cceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            2379999865554  48899999999999998763

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.35  E-value=0.0004  Score=58.15  Aligned_cols=105  Identities=23%  Similarity=0.239  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---------HHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS---------KEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~---------~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~  218 (339)
                      +|.++||+||++++|.+.++.+...|++|++..++         .+..+.+.+++   +.....+..+.++..+.+....
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            58899999999999999999999999999998543         33333333233   3334455544324444444332


Q ss_pred             C--CCccEEEECCChh-----------h---------------HHHHHHhhcc--CCEEEEEecccc
Q 037444          219 P--QGIDIYFENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMISQ  255 (339)
Q Consensus       219 ~--g~~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~  255 (339)
                      .  |++|++|++.|..           .               .+.++..|+.  +|++|.+++...
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence            2  4799999998731           1               1334555543  589999987554

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00019  Score=58.28  Aligned_cols=106  Identities=15%  Similarity=0.147  Sum_probs=72.4

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHH
Q 037444          140 YAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       140 ~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      +..|.+..++++|++||=+|  .+.|..+..+++..|++|+++..+++..+.+++   ..|....+..... +..+ +  
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~-~--   95 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAG-Y--   95 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTT-C--
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhh-c--
Confidence            44566788999999999888  466777888888889999999999987776653   3354321111111 2111 1  


Q ss_pred             hCCCCccEEEECCC-------hhhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFENVG-------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ..++.||+|+..-.       ...+.++.+.|+|+|+++...
T Consensus        96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            12348999986322       236788899999999988653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.33  E-value=0.00078  Score=54.92  Aligned_cols=82  Identities=17%  Similarity=0.199  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHH-------HHHHHHHhCCC-e--eeeCCChhhHHHHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEK-------VDLLKNKFGFD-D--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~-------~~~~~~~~g~~-~--v~~~~~~~~~~~~v~~  216 (339)
                      .++|+.++||+||++++|++.++.+...|+ +|+.+.++..+       .+.++ ..|.. .  ..|-.+..+..+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence            478999999999999999999988888899 57777776322       22333 45652 1  2344444233333333


Q ss_pred             hCCC-CccEEEECCC
Q 037444          217 CFPQ-GIDIYFENVG  230 (339)
Q Consensus       217 ~~~g-~~d~vid~~g  230 (339)
                      +... .+|.++.+.|
T Consensus        84 i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAA   98 (259)
T ss_dssp             SCTTSCEEEEEECCC
T ss_pred             ccccccccccccccc
Confidence            3333 7999999887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.27  E-value=0.00014  Score=59.41  Aligned_cols=106  Identities=17%  Similarity=0.113  Sum_probs=65.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCe----eeeCC-ChhhHHHHHHHhCC--C
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGFDD----AFNYK-EEPDLDAALKRCFP--Q  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~~~----v~~~~-~~~~~~~~v~~~~~--g  220 (339)
                      +|.++||+||++++|++++......|++|+++.++.++.+.+.   +..+-..    ..|.. +..++.+.+..+..  |
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5889999999999999999988899999999987665443332   1222222    22322 21123333333322  4


Q ss_pred             CccEEEECCChh---hH---------------HHHHHhhc-----cCCEEEEEeccccc
Q 037444          221 GIDIYFENVGGK---ML---------------DAVLLNMR-----LRGRIAVCGMISQY  256 (339)
Q Consensus       221 ~~d~vid~~g~~---~~---------------~~~~~~l~-----~~G~~v~~g~~~~~  256 (339)
                      ++|+++++.|..   .+               ..++..+.     .+|+++.+++....
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~  142 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF  142 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence            799999999842   22               22333443     25889888775553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=5e-05  Score=61.52  Aligned_cols=75  Identities=15%  Similarity=0.154  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC--CCccEEEEC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP--QGIDIYFEN  228 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--g~~d~vid~  228 (339)
                      .|.++||+||++++|.++++.+...|++|+++.++.++.+.+.     ....|-.+.+++.+.+.+...  |++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            6789999999999999999999999999999998865433211     122344443233333333322  479999998


Q ss_pred             CC
Q 037444          229 VG  230 (339)
Q Consensus       229 ~g  230 (339)
                      .|
T Consensus        81 AG   82 (237)
T d1uzma1          81 AG   82 (237)
T ss_dssp             CS
T ss_pred             ec
Confidence            87

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00046  Score=55.95  Aligned_cols=49  Identities=14%  Similarity=0.106  Sum_probs=43.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD  199 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~  199 (339)
                      +|..+||+||++++|.++++.+...|++|+++.+++++.+.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999988877776677753

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.20  E-value=0.00076  Score=54.94  Aligned_cols=80  Identities=19%  Similarity=0.216  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHhCCCeee--eCCChhhHHHHHHHhCC--CC
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK---NKFGFDDAF--NYKEEPDLDAALKRCFP--QG  221 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~---~~~g~~~v~--~~~~~~~~~~~v~~~~~--g~  221 (339)
                      +|.++||+||+|  ++|.++++.+...|++|+++.++++..+.++   +..+....+  |-.+.++..+.+.+...  |+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            688999999987  8999999988899999999988865443332   133333333  33333233333333221  47


Q ss_pred             ccEEEECCC
Q 037444          222 IDIYFENVG  230 (339)
Q Consensus       222 ~d~vid~~g  230 (339)
                      +|+++++.|
T Consensus        87 iDilVnnag   95 (256)
T d1ulua_          87 LDYLVHAIA   95 (256)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEeccc
Confidence            999999886

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00035  Score=54.91  Aligned_cols=97  Identities=13%  Similarity=0.093  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      ..+|+|+||+|.+|..++..+...|.+|.+++|++++..... ..++ +++..+-. +. +.+.+... ++|+||.++|.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~-~~~~gD~~-d~-~~l~~al~-~~d~vi~~~g~   77 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPA-HVVVGDVL-QA-ADVDKTVA-GQDAVIVLLGT   77 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCS-EEEESCTT-SH-HHHHHHHT-TCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-cccc-cccccccc-ch-hhHHHHhc-CCCEEEEEecc
Confidence            468999999999999999988888999999999988754332 2333 33433332 32 23433333 58999999974


Q ss_pred             h-----------hHHHHHHhhccC--CEEEEEecc
Q 037444          232 K-----------MLDAVLLNMRLR--GRIAVCGMI  253 (339)
Q Consensus       232 ~-----------~~~~~~~~l~~~--G~~v~~g~~  253 (339)
                      .           .....++.++..  .+++.++..
T Consensus        78 ~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence            2           122344455554  377777553

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.14  E-value=0.00011  Score=60.00  Aligned_cols=75  Identities=19%  Similarity=0.111  Sum_probs=51.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG----FDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      ++||+||++++|+++++.+...|++|++..++.++.+.++ ..+    ...+.+..+...+.+.+.+.. |++|+++++.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEECC
Confidence            7899999999999999988899999999998877776665 332    222333332213333333322 4799999876


Q ss_pred             C
Q 037444          230 G  230 (339)
Q Consensus       230 g  230 (339)
                      |
T Consensus        80 g   80 (252)
T d1zmta1          80 I   80 (252)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.12  E-value=0.00066  Score=56.05  Aligned_cols=103  Identities=14%  Similarity=0.099  Sum_probs=69.7

Q ss_pred             HHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHH
Q 037444          140 YAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKR  216 (339)
Q Consensus       140 ~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~  216 (339)
                      +.-+.+..++++|++||=+|  .+.|..+..+++..|++|++++.|++..+.+++.   .|....+..... ++    +.
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~  113 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED  113 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG
T ss_pred             HHHHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh
Confidence            33455667899999999999  4556677888999999999999999988777633   243211111111 11    11


Q ss_pred             hCCCCccEEEE-----CCChh----hHHHHHHhhccCCEEEEE
Q 037444          217 CFPQGIDIYFE-----NVGGK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       217 ~~~g~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  250 (339)
                       ..+.+|.|+.     .++.+    .++...+.|+|+|+++.-
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence             2347888864     33322    477889999999999764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.09  E-value=0.001  Score=54.66  Aligned_cols=81  Identities=10%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHH---HHHHHHHHhCCCee--eeCCChhhHHHHHHHhC--CC
Q 037444          150 KKGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKE---KVDLLKNKFGFDDA--FNYKEEPDLDAALKRCF--PQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~v~~~~--~g  220 (339)
                      -+|.++||+||+|  ++|.++++.+...|++|+++.++++   ..+.+.++.+...+  .+...+.+..+.+.+..  -|
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            4689999999876  7999999999999999999998864   33333323332222  23333213333333322  24


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+++.+.|
T Consensus        83 ~id~lV~nag   92 (274)
T d2pd4a1          83 SLDFIVHSVA   92 (274)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCeEEeecc
Confidence            7999999886

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.05  E-value=0.00065  Score=54.81  Aligned_cols=103  Identities=16%  Similarity=0.152  Sum_probs=67.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-------EEEEeCCHHHHHHHHHHh---CCC-e--eeeCCChhhHHHHHHHhCC-
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCY-------VVGSAGSKEKVDLLKNKF---GFD-D--AFNYKEEPDLDAALKRCFP-  219 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~-------V~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~v~~~~~-  219 (339)
                      -|||+||++++|.++++.+...|++       |+...++.++.+.+.+++   |.. .  ..|-.+.+++.+.+.+... 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4799999999999999888888887       889999988876665343   332 1  2244443233333333322 


Q ss_pred             -CCccEEEECCChh-----------h---------------HHHHHHhhcc--CCEEEEEeccccc
Q 037444          220 -QGIDIYFENVGGK-----------M---------------LDAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       220 -g~~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                       |++|+++++.|..           .               .+.++..|++  +|+++.+++....
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence             4799999988731           1               1334555543  6899998775543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.04  E-value=0.00043  Score=56.18  Aligned_cols=78  Identities=13%  Similarity=0.230  Sum_probs=50.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HcCCEEEEEeCCHHHHHHHHH--HhCCC-e--eeeCCChhhHHH---HHHHhCC-C
Q 037444          153 EYVYVSAASGAVGQLVGQFAK---LAGCYVVGSAGSKEKVDLLKN--KFGFD-D--AFNYKEEPDLDA---ALKRCFP-Q  220 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~---~~ga~V~~~~~~~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~---~v~~~~~-g  220 (339)
                      .+|||+||++++|+++++.+.   ..|++|+++++++++.+.+++  +.+.. .  .+|..+.++..+   .++.... +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            479999999999999876543   358999999999877655541  12221 2  234444323333   3333333 4


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ++|+++++.|
T Consensus        83 ~iDiLvnNAg   92 (248)
T d1snya_          83 GLNVLFNNAG   92 (248)
T ss_dssp             CCSEEEECCC
T ss_pred             CcceEEeecc
Confidence            7999999876

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.03  E-value=0.0057  Score=43.94  Aligned_cols=76  Identities=16%  Similarity=0.129  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      +|+|.|+ |.+|..+++.+...|.+|+++..++++.+.+.++++.. ++..+.  .-.+.+++..-..+|.++.++.++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDC--TKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcc--cchhhhhhcChhhhhhhcccCCcHH
Confidence            6899997 99999999999999999999999999988887556643 454333  2223344442247999999988763

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.02  E-value=0.00055  Score=55.38  Aligned_cols=102  Identities=24%  Similarity=0.283  Sum_probs=65.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCHHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhCC--CCccE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSA-GSKEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCFP--QGIDI  224 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~-~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~~--g~~d~  224 (339)
                      -+||+||++++|+++++.+...|++|++.+ ++++..+.+.+   +.|.. .  ..|-.+.++..+.+.+...  |++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            579999999999999999999999998875 45555554442   34442 1  2344443233333333322  47999


Q ss_pred             EEECCChh-----------h---------------HHHHHHhhc--cCCEEEEEecccc
Q 037444          225 YFENVGGK-----------M---------------LDAVLLNMR--LRGRIAVCGMISQ  255 (339)
Q Consensus       225 vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  255 (339)
                      ++++.|..           .               .+.++..|.  .+|++|.+++...
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~  141 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG  141 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence            99988731           1               133455553  4799999987554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.92  E-value=0.0025  Score=49.05  Aligned_cols=99  Identities=14%  Similarity=0.030  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-----------------eeCCCh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-----------------FNYKEE  207 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-----------------~~~~~~  207 (339)
                      ....+.+|.+||..|  .|.|..++.+|+ .|++|+++..|++-.+.+++..+....                 +..+-.
T Consensus        14 ~~l~~~~~~rvLd~G--CG~G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   90 (201)
T d1pjza_          14 SSLNVVPGARVLVPL--CGKSQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   90 (201)
T ss_dssp             HHHCCCTTCEEEETT--TCCSHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HHcCCCCCCEEEEec--CcCCHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc
Confidence            345789999999999  467888888887 499999999999999988854432111                 111111


Q ss_pred             hhHHHHHHHhCCCCccEEEECCCh---------hhHHHHHHhhccCCEEEEEe
Q 037444          208 PDLDAALKRCFPQGIDIYFENVGG---------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       208 ~~~~~~v~~~~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  251 (339)
                       ++.....    +.+|+|++...-         ..+....++|+++|+++...
T Consensus        91 -~l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          91 -ALTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             -SSTHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             -ccccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence             1111111    258999884431         25677889999999986543

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0016  Score=51.78  Aligned_cols=94  Identities=18%  Similarity=0.157  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHh---CC-----C--eeeeCCChhhHHHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKF---GF-----D--DAFNYKEEPDLDAALK  215 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~---g~-----~--~v~~~~~~~~~~~~v~  215 (339)
                      .+++|++||-.|  .+.|+.++.+|+..|  .+|+++..+++-.+.+++.+   +.     .  .+...+..       .
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~-------~  143 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGR-------M  143 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGG-------G
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecc-------c
Confidence            789999999999  678899999999876  49999999988766665322   22     1  11111110       0


Q ss_pred             HhC-CCCccEEEECCCh-hhHHHHHHhhccCCEEEEE
Q 037444          216 RCF-PQGIDIYFENVGG-KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       216 ~~~-~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~  250 (339)
                      ... .+.||.|+.+..- ......++.|+++|++|..
T Consensus       144 ~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         144 GYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            011 1369999987764 3556788999999999874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.90  E-value=0.0013  Score=52.70  Aligned_cols=101  Identities=16%  Similarity=0.162  Sum_probs=69.6

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHH
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKR  216 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~  216 (339)
                      .|.+...+++|++||=+|  .|.|..+..+++. +++|++++.|++-.+.+++   ..+.+.  ++..+.. ++     .
T Consensus         7 ~l~~~~~~~~~~rILDiG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~-~~-----~   77 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE-SL-----P   77 (234)
T ss_dssp             HHHHHHTCCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT-BC-----C
T ss_pred             HHHHHhCCCCCCEEEEeC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccc-cc-----c
Confidence            355778999999999998  5678888888774 7899999999887766653   233332  2221111 11     1


Q ss_pred             hCCCCccEEEECCCh-------hhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIYFENVGG-------KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +.++.||+|+.+-.-       ..++++.+.|+|+|+++...
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            223479999974431       26889999999999988754

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00081  Score=56.58  Aligned_cols=101  Identities=18%  Similarity=0.176  Sum_probs=67.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhC--------------CCe--eeeCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFG--------------FDD--AFNYKE  206 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g--------------~~~--v~~~~~  206 (339)
                      ...++++|++||=.|  .+.|.+++.+|+..|.  +|+.+..+++..+.+++.+-              .+.  +...  
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~--  167 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK--  167 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES--
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec--
Confidence            557899999998888  4669999999999875  89999999988877764221              011  1111  


Q ss_pred             hhhHHHHHHHhCCCCccEEEECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          207 EPDLDAALKRCFPQGIDIYFENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       207 ~~~~~~~v~~~~~g~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                        |+.+.......+.+|.||--...  ..+.++.+.|+++|+++.+.
T Consensus       168 --di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         168 --DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             --CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             --chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence              11111111122368888754443  48899999999999998774

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.86  E-value=0.0013  Score=54.30  Aligned_cols=102  Identities=10%  Similarity=0.040  Sum_probs=70.9

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhHHHHHHH
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDLDAALKR  216 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~v~~  216 (339)
                      |.....+.+|.+||=+|  .|.|..+..+++..|++|+++..++...+.+++   ..|..   .++..+-. ++     .
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~-~l-----~  130 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----P  130 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----S
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccc-cc-----c
Confidence            44557899999999998  457778888998889999999999887766653   23442   22322221 11     1


Q ss_pred             hCCCCccEEEECCC-----h--hhHHHHHHhhccCCEEEEEec
Q 037444          217 CFPQGIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       217 ~~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ..++.||+|+..-.     .  ..+.++.+.|+++|+++....
T Consensus       131 ~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         131 CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            12247999986332     1  267899999999999987654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.82  E-value=0.0028  Score=51.64  Aligned_cols=82  Identities=12%  Similarity=0.231  Sum_probs=55.8

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCCCe---eeeCCCh---hhHHHHHHHhCC
Q 037444          149 PKKGEYVYVSAAS--GAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGFDD---AFNYKEE---PDLDAALKRCFP  219 (339)
Q Consensus       149 ~~~g~~vlI~ga~--g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~~~---v~~~~~~---~~~~~~v~~~~~  219 (339)
                      +-.|.++||+||+  .++|.++++-+...|++|+.+.++.++. +.+.++++...   ..|-.++   .++.+.+.+...
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            4578999999964  4699999999999999999999887764 44544555421   2233332   133344444332


Q ss_pred             --CCccEEEECCC
Q 037444          220 --QGIDIYFENVG  230 (339)
Q Consensus       220 --g~~d~vid~~g  230 (339)
                        +.+|+++++.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence              37999999887

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0011  Score=52.97  Aligned_cols=99  Identities=7%  Similarity=-0.079  Sum_probs=65.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEE-
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYF-  226 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vi-  226 (339)
                      ..+|.+||=+|  .+.|..+..+++..+.+|+++..+++-.+.+++.... ...+..... +.......+..+.+|.++ 
T Consensus        51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f  127 (229)
T d1zx0a1          51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY  127 (229)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred             ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence            36889999998  5778888899887777999999999988888843321 111111111 333333344445888884 


Q ss_pred             ECCChh-----------hHHHHHHhhccCCEEEEE
Q 037444          227 ENVGGK-----------MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       227 d~~g~~-----------~~~~~~~~l~~~G~~v~~  250 (339)
                      |.+...           .+..+.+.|++||+++.+
T Consensus       128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            644321           456688999999998764

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.78  E-value=0.008  Score=45.35  Aligned_cols=96  Identities=14%  Similarity=0.077  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +.+|+|.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+.++...+. .... +......... ...|.++.+...
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~-~~~~-~~~~~~~~~i-~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPI-SLDV-NDDAALDAEV-AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEE-ECCT-TCHHHHHHHH-TTSSEEEECSCG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccc-cccc-cchhhhHhhh-hccceeEeeccc
Confidence            578999997 99999999998888999999999999998887445432222 2221 1111222211 247888887775


Q ss_pred             h-hHHHHHHhhccCCEEEEEe
Q 037444          232 K-MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       232 ~-~~~~~~~~l~~~G~~v~~g  251 (339)
                      . .......++..+-.++...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          78 TFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             GGHHHHHHHHHHHTCEEECSS
T ss_pred             hhhhHHHHHHHhhccceeecc
Confidence            4 4444555666666666553

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.76  E-value=0.0036  Score=48.05  Aligned_cols=98  Identities=19%  Similarity=0.191  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-e--eeeCCChhhHHHHHHHhC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-D--AFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~v~~~~  218 (339)
                      ...++++|++||=.|  .+.|..++.+|+. +.+|+++..+++..+.+++   ..|.. .  ++..    +..+...  .
T Consensus        27 ~~l~~~~g~~VLDiG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g----da~~~~~--~   97 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG----DAPEALC--K   97 (186)
T ss_dssp             HHHCCCTTCEEEEES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES----CHHHHHT--T
T ss_pred             HhcCCCCCCEEEEEE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC----chhhccc--c
Confidence            446899999999887  4566777777764 5699999999987777764   35542 2  2322    3222221  1


Q ss_pred             CCCccEEEECCCh----hhHHHHHHhhccCCEEEEEe
Q 037444          219 PQGIDIYFENVGG----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       219 ~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ...+|.|+...+.    +.++.+.+.|+++|+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            2379999876543    25778889999999987653

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.75  E-value=0.00083  Score=53.39  Aligned_cols=109  Identities=17%  Similarity=0.177  Sum_probs=66.6

Q ss_pred             cCchhhhHHHHHHHhc--CCCCCCEEEEEcCCchHHHHHHHHHHHc---C----CEEEEEeCCHHHHHHHHHHh------
Q 037444          132 LGMPGVTAYAGLYEVC--SPKKGEYVYVSAASGAVGQLVGQFAKLA---G----CYVVGSAGSKEKVDLLKNKF------  196 (339)
Q Consensus       132 l~~~~~tA~~~l~~~~--~~~~g~~vlI~ga~g~~G~~ai~la~~~---g----a~V~~~~~~~~~~~~~~~~~------  196 (339)
                      +..+...|. .| +..  .+++|++||.+|  ++.|+.++.+++..   |    .+|+.+...++-.+.+++.+      
T Consensus        61 is~P~~~a~-~l-~~L~~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~  136 (223)
T d1r18a_          61 ISAPHMHAF-AL-EYLRDHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS  136 (223)
T ss_dssp             ECCHHHHHH-HH-HHTTTTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             eehhhhHHH-HH-HHHhhccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchh
Confidence            333444443 33 433  789999999999  56677766666654   3    38999998887655554221      


Q ss_pred             --CCCe--eeeCCChhhHHHHHHHhCCCCccEEEECCChh-hHHHHHHhhccCCEEEEE
Q 037444          197 --GFDD--AFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       197 --g~~~--v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                        +...  ++..+..    +..  ...+.||.|+-+.+-+ .....++.|+++|++|..
T Consensus       137 ~~~~~nv~~~~~d~~----~~~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         137 MLDSGQLLIVEGDGR----KGY--PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             HHHHTSEEEEESCGG----GCC--GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hcCccEEEEEecccc----ccc--ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence              2222  2222111    000  0113799988877743 456778999999999874

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.74  E-value=0.0028  Score=50.67  Aligned_cols=92  Identities=18%  Similarity=0.137  Sum_probs=67.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +.++.+||=.|  .|.|..+..+++ .|++|+++..+++..+.++ +-+....+..+.. ++     ....+.+|+|+..
T Consensus        40 ~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence            56788888777  468998888876 5999999999999999998 6666555554443 32     1223589999875


Q ss_pred             CCh--------hhHHHHHHhhccCCEEEEE
Q 037444          229 VGG--------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~--------~~~~~~~~~l~~~G~~v~~  250 (339)
                      ...        ..+.+..+.|++||.++..
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            431        2577888999999988753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.73  E-value=0.003  Score=50.10  Aligned_cols=101  Identities=14%  Similarity=0.165  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHh
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~  217 (339)
                      |.+.++++++++||=+|.  |.|..+..+++. |++|+++..+++-.+.+++   ..+...  ++..+.. ++     .+
T Consensus         7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l-----~~   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QM-----PF   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-----CS
T ss_pred             HHHhcCCCCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc-cc-----cc
Confidence            346789999999999994  477777777654 7899999999887766653   234432  3333222 21     12


Q ss_pred             CCCCccEEEECCC-----h--hhHHHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .++.+|+|+..-.     .  ..+.++.++|+++|+++....
T Consensus        78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            2347999987543     1  268899999999999987643

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.0024  Score=51.89  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCchHHHHHHH-HHHH--cCCEEEEEeCCHHHHHHHHHHhC---C-Cee----eeCCChhhHH---HHHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQ-FAKL--AGCYVVGSAGSKEKVDLLKNKFG---F-DDA----FNYKEEPDLD---AALKR  216 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~-la~~--~ga~V~~~~~~~~~~~~~~~~~g---~-~~v----~~~~~~~~~~---~~v~~  216 (339)
                      .|..++|+||++++|.++++ +|+.  .|++|+++.+++++++.+.+++.   . .++    .|-.+.++..   +.+.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46788999999999998765 5553  59999999999998877654442   1 122    2444431222   22333


Q ss_pred             hC--CC-CccEEEECCC
Q 037444          217 CF--PQ-GIDIYFENVG  230 (339)
Q Consensus       217 ~~--~g-~~d~vid~~g  230 (339)
                      ..  .+ ..|+++++.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence            22  23 6788888755

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.69  E-value=0.0044  Score=49.05  Aligned_cols=72  Identities=26%  Similarity=0.236  Sum_probs=47.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|||+||+|.+|..+++.+...|.  .|+.+.+++++...+.  -+. +++..+.. +.. .+.+... ++|.|+++.+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~-~~~~~d~~-~~~-~~~~~~~-~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEA-DVFIGDIT-DAD-SINPAFQ-GIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCT-TEEECCTT-SHH-HHHHHHT-TCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCc-EEEEeeec-ccc-ccccccc-cceeeEEEEe
Confidence            4899999999999999999888885  6777888887655432  122 23332222 222 2333222 5899999875

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.69  E-value=0.0073  Score=48.72  Aligned_cols=95  Identities=16%  Similarity=0.111  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ..++|++||=.|.  +.|..++.++ .+|++|+++..+++..+.+++   ..|.. .++..    +..+.   ...+.+|
T Consensus       117 ~~~~g~~VLDiGc--GsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~----d~~~~---~~~~~fD  186 (254)
T d2nxca1         117 HLRPGDKVLDLGT--GSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG----SLEAA---LPFGPFD  186 (254)
T ss_dssp             HCCTTCEEEEETC--TTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES----CHHHH---GGGCCEE
T ss_pred             hcCccCEEEEccc--chhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec----ccccc---ccccccc
Confidence            3689999999884  3477776655 468999999999987766663   23443 23322    22221   2234899


Q ss_pred             EEEECCChh----hHHHHHHhhccCCEEEEEec
Q 037444          224 IYFENVGGK----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       224 ~vid~~g~~----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+......    .+....++|+++|+++..|.
T Consensus       187 ~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         187 LLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            999876543    45677789999999987654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.003  Score=51.20  Aligned_cols=81  Identities=12%  Similarity=0.204  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCeeee--CCChhhHHHHHHHhCC--C
Q 037444          150 KKGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDDAFN--YKEEPDLDAALKRCFP--Q  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~v~~--~~~~~~~~~~v~~~~~--g  220 (339)
                      -+|.++||+||+|  ++|.+++..+...|++|+.+.++++..+.+.+   ..+....+.  ..+..+..+.+.+...  +
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            4789999999988  78899999999999999999988664443331   334333322  2222123333333322  3


Q ss_pred             CccEEEECCC
Q 037444          221 GIDIYFENVG  230 (339)
Q Consensus       221 ~~d~vid~~g  230 (339)
                      ..|+.+++.+
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            7899998764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.57  E-value=0.0055  Score=46.26  Aligned_cols=100  Identities=14%  Similarity=0.014  Sum_probs=64.1

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC---eeeeCCChhhHHHHHHHhC
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD---DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~v~~~~  218 (339)
                      +|.+.....++.+|+|.|+ |+++.+++..+...+.+|+++.|+.++.+.+.+.++..   ..+..+.          ..
T Consensus         8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~~   76 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------IP   76 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CC
T ss_pred             HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------cc
Confidence            4534333457889999996 99999998887777779999999999888776555421   1221111          11


Q ss_pred             CCCccEEEECCChhhHH----HHHHhhccCCEEEEEec
Q 037444          219 PQGIDIYFENVGGKMLD----AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 ~g~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~g~  252 (339)
                      ...+|++|+|+......    .....++++..++++..
T Consensus        77 ~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          77 LQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             CSCCSEEEECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred             ccccceeeecccccccccccchhhhhhcccceeeeeec
Confidence            23699999998843211    12344556676666543

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.003  Score=52.11  Aligned_cols=103  Identities=16%  Similarity=0.224  Sum_probs=62.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEE---EEeCCHHHHH---HHHHHhCC---C-e--eeeCCChhhHHHHHHHhCCCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVV---GSAGSKEKVD---LLKNKFGF---D-D--AFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~---~~~~~~~~~~---~~~~~~g~---~-~--v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      -|||+||++++|.++++.+...|++|+   .+.++.++.+   ...+++..   . .  .+|-.+.++....+.+...|.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            368999999999999988888898644   4454433322   22213332   1 1  235555434444455544568


Q ss_pred             ccEEEECCChh-----------hH---------------HHHHHhhcc--CCEEEEEeccccc
Q 037444          222 IDIYFENVGGK-----------ML---------------DAVLLNMRL--RGRIAVCGMISQY  256 (339)
Q Consensus       222 ~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~~  256 (339)
                      +|+++++.|..           .+               +.++..|.+  +|++|.+++..+.
T Consensus        84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~  146 (285)
T d1jtva_          84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL  146 (285)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred             hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc
Confidence            99999988632           11               223344533  6999999876553

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.56  E-value=0.012  Score=44.55  Aligned_cols=83  Identities=16%  Similarity=0.131  Sum_probs=57.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee-------eeCC---ChhhHHHHHHHhCCCCc
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA-------FNYK---EEPDLDAALKRCFPQGI  222 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v-------~~~~---~~~~~~~~v~~~~~g~~  222 (339)
                      .++.|.|+ |.+|++.+..+...|.+|.+..+++++.+.++ +.+....       ....   .. +..+.+     ..+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~-----~~a   73 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTS-DIGLAV-----KDA   73 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEES-CHHHHH-----TTC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhh-hhHhHh-----cCC
Confidence            58999997 99999999999999999999999999988887 5442110       0000   01 233333     258


Q ss_pred             cEEEECCChhhHHHHHHhhcc
Q 037444          223 DIYFENVGGKMLDAVLLNMRL  243 (339)
Q Consensus       223 d~vid~~g~~~~~~~~~~l~~  243 (339)
                      |++|-++........++.+++
T Consensus        74 D~iii~v~~~~~~~~~~~i~~   94 (184)
T d1bg6a2          74 DVILIVVPAIHHASIAANIAS   94 (184)
T ss_dssp             SEEEECSCGGGHHHHHHHHGG
T ss_pred             CEEEEEEchhHHHHHHHHhhh
Confidence            999999987655555544443

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.015  Score=42.96  Aligned_cols=102  Identities=18%  Similarity=0.168  Sum_probs=72.2

Q ss_pred             hhHHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHH
Q 037444          137 VTAYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK  215 (339)
Q Consensus       137 ~tA~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~  215 (339)
                      ...+.++.+..+ +-.|.+++|.| -|-+|...++.++.+|++|+++...+-+.-.+. --|.. +.      .+.+.+ 
T Consensus         8 ~S~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~~-v~------~~~~a~-   77 (163)
T d1li4a1           8 ESLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGYE-VT------TMDEAC-   77 (163)
T ss_dssp             HHHHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHT-
T ss_pred             hhHHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCceE-ee------ehhhhh-
Confidence            345555555434 45899999999 599999999999999999999998876533332 23332 21      222222 


Q ss_pred             HhCCCCccEEEECCChh--hHHHHHHhhccCCEEEEEec
Q 037444          216 RCFPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       216 ~~~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  252 (339)
                          ...|+++-+.|+.  .-.+-++.|+++-.+..+|.
T Consensus        78 ----~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Gh  112 (163)
T d1li4a1          78 ----QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGH  112 (163)
T ss_dssp             ----TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSS
T ss_pred             ----hhccEEEecCCCccchhHHHHHhccCCeEEEEecc
Confidence                2479999999974  34578889999888888775

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.012  Score=44.72  Aligned_cols=106  Identities=15%  Similarity=0.116  Sum_probs=63.3

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH---HHhC----C-CeeeeCCChhhHH
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLK---NKFG----F-DDAFNYKEEPDLD  211 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~---~~~g----~-~~v~~~~~~~~~~  211 (339)
                      .+|.+...--++.+|+|.|+ |++|.+++..+...|+ +++++.++.++.+.+.   ++++    . ....+..+...+.
T Consensus         7 ~~l~~~~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   85 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA   85 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchh
Confidence            34533332246789999996 9999999888888898 7888888765443322   1222    1 1233333321232


Q ss_pred             HHHHHhCCCCccEEEECCChhh-------HHHHHHhhccCCEEEEEec
Q 037444          212 AALKRCFPQGIDIYFENVGGKM-------LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       212 ~~v~~~~~g~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+     ..+|++|+|+.-..       +..-+..+.++..++++-.
T Consensus        86 ~~~-----~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          86 EAL-----ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             HHH-----HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             hhh-----cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            222     14899999986321       1112356677788777744

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.43  E-value=0.0064  Score=49.29  Aligned_cols=35  Identities=14%  Similarity=0.133  Sum_probs=31.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      ..||+||++++|.++++.+...|++|+.+.++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            57999999999999999999999999999987554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.41  E-value=0.012  Score=43.83  Aligned_cols=85  Identities=15%  Similarity=0.155  Sum_probs=59.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|.|+|. |.+|...+..++..|.+|++..++++..+.++ +.|. +...+..   +   .+     ...|+||-|+...
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~---~---~~-----~~~DiIilavp~~   68 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL---S---LL-----QTAKIIFLCTPIQ   68 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG---G---GG-----TTCSEEEECSCHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec---c---cc-----cccccccccCcHh
Confidence            6889985 99999988888889999999999999999888 7775 3332211   1   11     2589999998755


Q ss_pred             hHHHHHHhh----ccCCEEEEEe
Q 037444          233 MLDAVLLNM----RLRGRIAVCG  251 (339)
Q Consensus       233 ~~~~~~~~l----~~~G~~v~~g  251 (339)
                      .....++-+    .++-.++.++
T Consensus        69 ~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          69 LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhhhhhhcccccceeecc
Confidence            444444433    4444544554

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.38  E-value=0.02  Score=41.98  Aligned_cols=82  Identities=21%  Similarity=0.303  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHH-HHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQ-FAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~-la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|.++|+ |.+|.+.++ +++.-+.+|++..+++++.+.+.+++|.. +.+..+  .    +     ...|+||=|+--.
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--~----v-----~~~Div~lavkP~   68 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--E----L-----HSDDVLILAVKPQ   68 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--C----C-----CTTSEEEECSCHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--c----c-----cccceEEEecCHH
Confidence            6889996 999998776 55554479999999999988887567653 232221  1    1     1479999888766


Q ss_pred             hHHHHHHhhccCCEEE
Q 037444          233 MLDAVLLNMRLRGRIA  248 (339)
Q Consensus       233 ~~~~~~~~l~~~G~~v  248 (339)
                      .+...++-+++.++++
T Consensus        69 ~~~~v~~~l~~~~~~v   84 (152)
T d1yqga2          69 DMEAACKNIRTNGALV   84 (152)
T ss_dssp             HHHHHHTTCCCTTCEE
T ss_pred             HHHHhHHHHhhcccEE
Confidence            7777777777766654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.32  E-value=0.021  Score=39.56  Aligned_cols=89  Identities=11%  Similarity=0.034  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH--HHHHHHHhCCCeeee--CCChhhHHHHHHHhCCCCccEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK--VDLLKNKFGFDDAFN--YKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~--~~~~~~~~g~~~v~~--~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      .|.+|||.|+ |.+|..-++.+...|++|++++.....  ..++. + +.-..+.  +... ++         .++++|+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~-~~i~~~~~~~~~~-dl---------~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-E-GMLTLVEGPFDET-LL---------DSCWLAI   77 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-T-TSCEEEESSCCGG-GG---------TTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-c-CCceeeccCCCHH-Hh---------CCCcEEe
Confidence            5789999997 999999999999999999888754432  22222 2 2112221  1211 11         2689999


Q ss_pred             ECCChhhHH-HHHHhhccCCEEEEEec
Q 037444          227 ENVGGKMLD-AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       227 d~~g~~~~~-~~~~~l~~~G~~v~~g~  252 (339)
                      .+.+.+.++ +..+..++.|.+|.+..
T Consensus        78 ~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            999987665 56677888899988754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=96.32  E-value=0.0053  Score=51.44  Aligned_cols=74  Identities=15%  Similarity=0.222  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAG-----SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFE  227 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~-----~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid  227 (339)
                      +|||+||+|-+|..+++.+...|.+|+++.+     ..++...+. ..+--+++..+-. + .+.+.+...+ ++|+||.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~-~-~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIR-N-KNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTT-C-HHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccC-C-HHHHHHHHHhcCCceEEe
Confidence            7999999999999999988888999999852     122233333 3322233322211 1 1233333334 7899999


Q ss_pred             CCC
Q 037444          228 NVG  230 (339)
Q Consensus       228 ~~g  230 (339)
                      +.+
T Consensus        79 ~aa   81 (338)
T d1orra_          79 LAG   81 (338)
T ss_dssp             CCC
T ss_pred             ecc
Confidence            885

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.26  E-value=0.0083  Score=49.50  Aligned_cols=38  Identities=13%  Similarity=0.200  Sum_probs=33.4

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          151 KGEYVYVSAASG--AVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       151 ~g~~vlI~ga~g--~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      +|.++||+||+|  ++|.++++.+...|++|+++.+++..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            688999999876  89999999999999999998876543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=96.18  E-value=0.0059  Score=51.58  Aligned_cols=47  Identities=30%  Similarity=0.282  Sum_probs=40.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      .-+.+|.+|||+||+|-+|..+++.+...|.+|++++++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            45688999999999999999999888888999999999887766554

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=96.18  E-value=0.0018  Score=55.10  Aligned_cols=77  Identities=17%  Similarity=0.236  Sum_probs=50.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---Ceee--eCCChhhHHHHHHHhCCC-CccE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---DDAF--NYKEEPDLDAALKRCFPQ-GIDI  224 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~~v~--~~~~~~~~~~~v~~~~~g-~~d~  224 (339)
                      +|.+|||+||+|-+|..+++.+...|.+|++++++..+...+.+....   -+.+  |-.+.    +.+.+...+ .+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~----~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ----NKLLESIREFQPEI   82 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH----HHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh----Hhhhhhhhhchhhh
Confidence            468999999999999999999999999999999876532222112211   1122  22222    223333333 6899


Q ss_pred             EEECCCh
Q 037444          225 YFENVGG  231 (339)
Q Consensus       225 vid~~g~  231 (339)
                      |+.+++.
T Consensus        83 v~~~aa~   89 (356)
T d1rkxa_          83 VFHMAAQ   89 (356)
T ss_dssp             EEECCSC
T ss_pred             hhhhhcc
Confidence            9998873

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=96.10  E-value=0.02  Score=45.11  Aligned_cols=100  Identities=14%  Similarity=0.087  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHh----
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRC----  217 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~----  217 (339)
                      .+.....+||=+|  ..+|+.++.+|+.+  +.+|+.+..+++..+.+++   +.|...-+..... +..+.+.++    
T Consensus        55 ~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhcc
Confidence            4445668999998  78899999999887  4699999999988766663   3465432322222 333344433    


Q ss_pred             -CCCCccEEEECCC-h---hhHHHHHHhhccCCEEEE
Q 037444          218 -FPQGIDIYFENVG-G---KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       218 -~~g~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~  249 (339)
                       ..+.||.||-=.. .   ..++.++++|+++|.++.
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~  168 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGY  168 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEE
Confidence             2347999875333 2   267899999999999875

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.012  Score=46.50  Aligned_cols=103  Identities=16%  Similarity=0.117  Sum_probs=67.2

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCee------------e-------eCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDA------------F-------NYK  205 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v------------~-------~~~  205 (339)
                      +...+.++.+||..|  -|.|..+..+|+ .|++|+++..|++-.+.+++..+....            .       +..
T Consensus        39 ~~l~~~~~~rvLd~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678999999998  355888888876 699999999999988888744432110            0       000


Q ss_pred             ChhhHHHHHHHhCCCCccEEEECCCh---------hhHHHHHHhhccCCEEEEEec
Q 037444          206 EEPDLDAALKRCFPQGIDIYFENVGG---------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       206 ~~~~~~~~v~~~~~g~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .. |+. .+.....+.+|+|+++..-         ..+....++|+++|+++....
T Consensus       116 ~~-d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CC-SIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ES-CGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             Ec-chh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            00 110 0111122379999986531         256788999999999876544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.05  E-value=0.032  Score=40.94  Aligned_cols=85  Identities=12%  Similarity=0.171  Sum_probs=63.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      +|.++|. |.+|.+.+.-....|.++++..++.++.+.+.+++|...+-      +..+.+.     ..|+||-|+-...
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~   69 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL   69 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence            6889995 99999887766666889999999999888776578865321      2222332     4899999998777


Q ss_pred             HHHHHHhhccCCEEEEE
Q 037444          234 LDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       234 ~~~~~~~l~~~G~~v~~  250 (339)
                      +...+..+.++..++.+
T Consensus        70 ~~~vl~~l~~~~~iis~   86 (152)
T d2ahra2          70 FETVLKPLHFKQPIISM   86 (152)
T ss_dssp             HHHHHTTSCCCSCEEEC
T ss_pred             HHHHhhhcccceeEecc
Confidence            78888888887776655

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.96  E-value=0.011  Score=50.90  Aligned_cols=32  Identities=19%  Similarity=0.090  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA  183 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~  183 (339)
                      |.+|||+||+|-+|..++..+...|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68999999999999999999889999999986

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0059  Score=42.38  Aligned_cols=38  Identities=16%  Similarity=0.197  Sum_probs=32.6

Q ss_pred             CCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          149 PKKG-EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       149 ~~~g-~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      +.++ .+|.|.|+ |.+|.+.++-|+.+|.++++.+.+++
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3444 46999996 99999999999999999999997655

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=95.95  E-value=0.0065  Score=49.81  Aligned_cols=39  Identities=15%  Similarity=0.158  Sum_probs=31.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-HHHHHHHH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS-KEKVDLLK  193 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~-~~~~~~~~  193 (339)
                      +||+||++++|.++++.+...|++|+++.++ +++.+.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            5899999999999999999999999987654 44444443

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.92  E-value=0.016  Score=41.55  Aligned_cols=75  Identities=19%  Similarity=0.151  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|.|.|++|-+|..+++..... +.++.+.....+...... .                        .++|++||++..+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-~------------------------~~~DvvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-D------------------------GNTEVVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-T------------------------TTCSEEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-c------------------------ccCCEEEEcccHH
Confidence            6899999999999999887654 678777664322222221 1                        2467777777665


Q ss_pred             hHHHHHHhhccCCEEEEEecc
Q 037444          233 MLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       233 ~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .....++.....|.=+.+|.+
T Consensus        56 ~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          56 VVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             THHHHHHHHHHTTCEEEECCC
T ss_pred             HHHHHHHHHHhcCCCEEEecc
Confidence            555555555555544555553

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.91  E-value=0.036  Score=39.50  Aligned_cols=73  Identities=18%  Similarity=0.175  Sum_probs=52.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee-eCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF-NYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +++|.|. |.+|..+++.+...|.+|+++..++++.+.++ ..+...++ |..+. +   .+.+..-..+|.++-+++++
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~---~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-N---ELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-T---HHHHHTGGGCSEEEECCCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-h---hhhccCCccccEEEEEcCch
Confidence            4788886 99999999999999999999999999988887 66653222 22222 2   23333112689998888754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.81  E-value=0.0096  Score=45.54  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=37.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF  196 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~  196 (339)
                      +|.|+||+|++|.++.+.+...|++|++..|++++.+.+.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            6889988899999999999999999999999999877765444

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.68  E-value=0.0071  Score=47.90  Aligned_cols=101  Identities=15%  Similarity=0.140  Sum_probs=68.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +...+++|++||=.|+  +.|..+..+|+..|-  +|+++..+++..+.+++....   ...+..+.  ....... ...
T Consensus        67 ~~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~~~~~~-~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPEEYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGGGGT-TTC
T ss_pred             cccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CCccccc-ccc
Confidence            4467899999999984  678889999998864  899999999988877743322   11222221  1111111 111


Q ss_pred             CCccEEEECCCh-----hhHHHHHHhhccCCEEEEE
Q 037444          220 QGIDIYFENVGG-----KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       220 g~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  250 (339)
                      ..+|+++..+..     ..+..+.+.|+++|+++.+
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            368888865542     1577889999999998865

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.66  E-value=0.032  Score=47.87  Aligned_cols=109  Identities=20%  Similarity=0.245  Sum_probs=68.7

Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH---h-------CC--Ce-eeeC
Q 037444          139 AYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNK---F-------GF--DD-AFNY  204 (339)
Q Consensus       139 A~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~---~-------g~--~~-v~~~  204 (339)
                      ...++ +..++++|+++|=+|  +|+|..+.++|+..|+ +|+++..++...+.+++.   +       |.  .. .+..
T Consensus       205 i~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~  281 (406)
T d1u2za_         205 LSDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL  281 (406)
T ss_dssp             HHHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred             HHHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence            34444 668999999988887  7899999999999987 899999998776666521   1       11  00 1111


Q ss_pred             CChhhHHHHHHHhCCCCccEEEECCC--h----hhHHHHHHhhccCCEEEEEe
Q 037444          205 KEEPDLDAALKRCFPQGIDIYFENVG--G----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       205 ~~~~~~~~~v~~~~~g~~d~vid~~g--~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ....-..+...... ..+|+++-...  .    ..+.+..+.|++||++|...
T Consensus       282 ~~~f~~~~~~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         282 KKSFVDNNRVAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             SSCSTTCHHHHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eechhhcccccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            11000011121111 14777775321  1    25778889999999998753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.57  E-value=0.23  Score=35.95  Aligned_cols=95  Identities=20%  Similarity=0.202  Sum_probs=62.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHH--HH-HHHHHHhCCCeeeeCCChhhHH----------------
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKE--KV-DLLKNKFGFDDAFNYKEEPDLD----------------  211 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~--~~-~~~~~~~g~~~v~~~~~~~~~~----------------  211 (339)
                      .+|.|.|++|.+|.-+.++.+..  ..+|++.+....  .+ +.++ ++.+..++-.+.. ...                
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~-ef~Pk~v~i~d~~-~~~~l~~~~~~~~~~v~~g   80 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK-RTNAKRAVIADPS-LYNDLKEALAGSSVEAAAG   80 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH-HTTCSEEEESCGG-GHHHHHHHTTTCSSEEEES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH-hhccccceeccHH-HHHHHHHHhhhcccccccC
Confidence            68999999999999999999876  458877764432  22 3334 7777766544432 221                


Q ss_pred             -HHHHHhCCCCccEEEECCCh-hhHHHHHHhhccCCEEEE
Q 037444          212 -AALKRCFPQGIDIYFENVGG-KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       212 -~~v~~~~~g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  249 (339)
                       +.+.+.....+|+++.++.+ .-+.-.+.+++.+-++..
T Consensus        81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             ccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence             11122222257999988654 678888888888876543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.54  E-value=0.066  Score=42.45  Aligned_cols=96  Identities=15%  Similarity=0.121  Sum_probs=65.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-eeeeCCChhhHHHHHHHhC
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~v~~~~  218 (339)
                      +.......++.+||=.|.  |.|..+..+++ .|++|+++..|++-.+.+++.+   +.. .++..+-        .++.
T Consensus        33 ~~~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~--------~~l~  101 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV--------LEIA  101 (251)
T ss_dssp             HHHHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG--------GGCC
T ss_pred             HHHHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhh--------hhcc
Confidence            334456677789999984  44888887776 6899999999998777777432   321 2333222        2222


Q ss_pred             -CCCccEEEECCCh----------hhHHHHHHhhccCCEEEE
Q 037444          219 -PQGIDIYFENVGG----------KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       219 -~g~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  249 (339)
                       .+.+|+|+...+.          ..+.++.++|+++|.++.
T Consensus       102 ~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             2379999975432          257788899999999875

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.46  E-value=0.039  Score=42.93  Aligned_cols=94  Identities=16%  Similarity=0.075  Sum_probs=63.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .++++.+||=+|.  |.|..+..+++ .|++|+++..|++-.+.+++.   .+.. ..+..+.. ++     ....+.+|
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD  104 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD  104 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence            4678899999884  55788888886 589999999999888777642   2321 22222221 11     11123799


Q ss_pred             EEEECCC-----h-h---hHHHHHHhhccCCEEEEE
Q 037444          224 IYFENVG-----G-K---MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~~g-----~-~---~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+....     . +   .+..+.+.|+++|+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            9987433     1 1   477888999999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.41  E-value=0.11  Score=38.60  Aligned_cols=88  Identities=11%  Similarity=0.112  Sum_probs=60.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|+|.|. |.+|...+..++..|.  +|+++.++++..+.++ +.+. +........         ......|+|+-|+.
T Consensus         3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p   71 (171)
T d2g5ca2           3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP   71 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred             EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence            6999995 9999999988888874  8999999999999998 7776 333322111         01125788888888


Q ss_pred             hh----hHHHHHHhhccCCEEEEEec
Q 037444          231 GK----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~~----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ..    .+......+.++-.++.++.
T Consensus        72 ~~~~~~vl~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          72 VRTFREIAKKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             chhhhhhhhhhhcccccccccccccc
Confidence            54    33344455566666666655

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.032  Score=46.68  Aligned_cols=73  Identities=16%  Similarity=0.168  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CHHHHHHHHHHh---CCCee-eeCCChhhHHHHHHHhCCCCccEE
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAG----SKEKVDLLKNKF---GFDDA-FNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~----~~~~~~~~~~~~---g~~~v-~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      +|||+||+|-+|..++..+...|.+|+++++    ......... .+   +...+ .|-.+...+.+.++.   .++|+|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V   77 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence            6999999999999999999889999999864    222223222 22   22211 222232123233332   279999


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      |++.+
T Consensus        78 iHlAa   82 (338)
T d1udca_          78 IHFAG   82 (338)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            99875

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.39  E-value=0.031  Score=42.93  Aligned_cols=86  Identities=21%  Similarity=0.186  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|- |.+|..++++++.+|++|++..+.......   ..+..    .  . ++.+.+++     .|+++-++.
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~~----~--~-~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGYY----V--D-SLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTCB----C--S-CHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc---cceee----e--c-cccccccc-----cccccccCC
Confidence            5789999995 999999999999999999999866443221   11211    1  1 44444443     788888776


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . +     .-.+.++.|+++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHHhhhCCccEEEecCc
Confidence            2 2     22467888888888887754

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.35  E-value=0.022  Score=46.05  Aligned_cols=33  Identities=15%  Similarity=0.202  Sum_probs=30.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .+|||+||+|-+|..++..++..|.+|+++.++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~   34 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ   34 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence            479999999999999999999999999999865

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.26  E-value=0.039  Score=43.17  Aligned_cols=102  Identities=12%  Similarity=0.041  Sum_probs=68.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHh--
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRC--  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~--  217 (339)
                      ...+.....+||=+|  ...|+.++.+|+.+  +.+|+.+..+++..+.+++   ..|....+..... +..+.+.+.  
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~  129 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA  129 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence            334556678999998  68899999999876  5699999999887666653   3455432322222 333333322  


Q ss_pred             --CCCCccEEEECCCh----hhHHHHHHhhccCCEEEE
Q 037444          218 --FPQGIDIYFENVGG----KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       218 --~~g~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  249 (339)
                        ..+.+|.||--...    ..++.+++.|++||.++.
T Consensus       130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEE
Confidence              23479988765442    257899999999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.0078  Score=40.27  Aligned_cols=36  Identities=17%  Similarity=0.100  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      +|.+|+|+|. |..|+.+++++...|++|++...+..
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            5778999997 99999999999999999999987543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.015  Score=49.23  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=29.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ..|||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            4688999999999999999888899999999754

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0041  Score=49.49  Aligned_cols=75  Identities=21%  Similarity=0.261  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+.+|||+||+|-+|..+++.+...|.  +|++++|++.+...-. .-.... ..|..   +. +.+.... .++|++|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~---~~-~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFE---KL-DDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGG---GG-GGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccc---cc-ccccccc-cccccccc
Confidence            356899999999999999988877775  8999998654321111 111111 12222   11 1222222 26999999


Q ss_pred             CCCh
Q 037444          228 NVGG  231 (339)
Q Consensus       228 ~~g~  231 (339)
                      |.|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.17  E-value=0.0091  Score=47.51  Aligned_cols=35  Identities=20%  Similarity=0.185  Sum_probs=31.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .++||+||++++|.++++.+...|++|+++.++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            57899999999999999999999999999998754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.15  E-value=0.018  Score=44.86  Aligned_cols=101  Identities=11%  Similarity=0.121  Sum_probs=64.6

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHH---hCCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          146 VCSPKKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNK---FGFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       146 ~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ...++||++||=.|+  +.|..+..+++..+ .+|+++..+++..+.+++.   .+-...+..+.. + ..... .....
T Consensus        51 ~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~-~~~~~-~~~~~  125 (209)
T d1nt2a_          51 RLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-K-PWKYS-GIVEK  125 (209)
T ss_dssp             CCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-C-GGGTT-TTCCC
T ss_pred             cCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-C-ccccc-cccce
Confidence            357899999999995  55678888888775 4999999999877766532   222122222111 1 00110 01125


Q ss_pred             ccEEEECCC--h---hhHHHHHHhhccCCEEEEEe
Q 037444          222 IDIYFENVG--G---KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       222 ~d~vid~~g--~---~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +|+++....  .   ..+.++.+.|+++|+++.+-
T Consensus       126 vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         126 VDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            788876543  1   15778889999999998764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.13  E-value=0.082  Score=44.02  Aligned_cols=39  Identities=3%  Similarity=-0.056  Sum_probs=31.5

Q ss_pred             CCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Q 037444          152 GEYVYVSAA--SGAVGQLVGQFAKLAGCYVVGSAGSKEKVD  190 (339)
Q Consensus       152 g~~vlI~ga--~g~~G~~ai~la~~~ga~V~~~~~~~~~~~  190 (339)
                      ++..||+|+  +.++|.++++.+...||+|+.+.++.....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            456799994  459999999999999999999887765433

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.06  E-value=0.19  Score=36.78  Aligned_cols=92  Identities=16%  Similarity=0.134  Sum_probs=55.5

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHc-CCEEEEEeCC-HH--HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCC-CCccEEE
Q 037444          153 EYVYVSAASGAVGQ-LVGQFAKLA-GCYVVGSAGS-KE--KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFP-QGIDIYF  226 (339)
Q Consensus       153 ~~vlI~ga~g~~G~-~ai~la~~~-ga~V~~~~~~-~~--~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~-g~~d~vi  226 (339)
                      -++.|+| +|.+|. ..+++++.. ..++++++.. .+  .....+ ++|....  +    +..+.+.+... .++|+||
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~--~----~~~d~l~~~~~~~~iDiVf   76 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--Y----AGVEGLIKLPEFADIDFVF   76 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--S----SHHHHHHHSGGGGGEEEEE
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCccc--c----cceeeeeecccccccCEEE
Confidence            4799999 699987 567888766 4488887643 22  335555 7776422  1    22233333222 2799999


Q ss_pred             ECCCh-hhHHHH--HHhhccCCEEEEEec
Q 037444          227 ENVGG-KMLDAV--LLNMRLRGRIAVCGM  252 (339)
Q Consensus       227 d~~g~-~~~~~~--~~~l~~~G~~v~~g~  252 (339)
                      +++.. .+.+..  .+.++.|-.+++...
T Consensus        77 ~ATpag~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          77 DATSASAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             ECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred             EcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence            99885 455544  444555556665543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.23  Score=41.17  Aligned_cols=101  Identities=19%  Similarity=0.216  Sum_probs=67.7

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----------HhCCC----eeeeCC--
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN----------KFGFD----DAFNYK--  205 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~----------~~g~~----~v~~~~--  205 (339)
                      +.+..+++++++||=.|  .|.|..++++|+..++ +++++..+++..+.+++          .+|..    .++..+  
T Consensus       143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            34678899999988888  7889999999999987 79999999877665542          12221    222222  


Q ss_pred             ChhhHHHHHHHhCCCCccEEEECCC--h----hhHHHHHHhhccCCEEEEEe
Q 037444          206 EEPDLDAALKRCFPQGIDIYFENVG--G----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       206 ~~~~~~~~v~~~~~g~~d~vid~~g--~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +. ++.+.+.     .+|+|+-..-  .    ..+.+.++.|++||++|..-
T Consensus       221 ~~-~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         221 SE-EWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             SH-HHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cc-ccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22 2333332     2678774221  2    25677888999999998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.96  E-value=0.16  Score=37.12  Aligned_cols=100  Identities=20%  Similarity=0.168  Sum_probs=71.2

Q ss_pred             HHHHHHHhcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHh
Q 037444          139 AYAGLYEVCS-PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       139 A~~~l~~~~~-~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~  217 (339)
                      .+.++.+..+ +-.|.+++|.|= |-+|.-.++-+|.+|++|+++...+-+.-.+. --|. +|.      ...+.+   
T Consensus         9 ~~d~i~r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~---   76 (163)
T d1v8ba1           9 LPDGLMRATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIV---   76 (163)
T ss_dssp             HHHHHHHHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHT---
T ss_pred             HHHHHHHHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHcc---
Confidence            3444444433 468999999995 99999999999999999999998886533332 1222 222      222222   


Q ss_pred             CCCCccEEEECCChh--hHHHHHHhhccCCEEEEEec
Q 037444          218 FPQGIDIYFENVGGK--MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       218 ~~g~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  252 (339)
                        ...|+++-++|..  .-.+-++.|+++..+..+|-
T Consensus        77 --~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GH  111 (163)
T d1v8ba1          77 --DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGH  111 (163)
T ss_dssp             --TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSS
T ss_pred             --ccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccc
Confidence              2489999999985  34577899999999888775

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.94  E-value=0.035  Score=42.77  Aligned_cols=48  Identities=27%  Similarity=0.324  Sum_probs=42.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD  199 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~  199 (339)
                      -.|.+|+|.| .|.+|..+++++...|++|++...+.++..... .+|..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~   72 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHT   72 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhccc
Confidence            3788999999 599999999999999999999998888888777 77764

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.072  Score=42.95  Aligned_cols=96  Identities=11%  Similarity=0.014  Sum_probs=67.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      ..++.+||=+|  .|.|..+..+++.. +++++++..+++-.+.+++...-...+..+.. ++     .+.++.+|+|+.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence            45677888877  56778888888876 67999999999988888733322222222221 11     112347999997


Q ss_pred             CCChhhHHHHHHhhccCCEEEEEec
Q 037444          228 NVGGKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ...-..+.+..+.|+++|.++....
T Consensus       154 ~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         154 IYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHhCCCcEEEEEee
Confidence            6665678899999999999987643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.84  E-value=0.025  Score=47.25  Aligned_cols=33  Identities=18%  Similarity=0.257  Sum_probs=30.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .++||+||+|-+|..++..+...|.+|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            378999999999999999998899999999974

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.73  E-value=0.017  Score=44.39  Aligned_cols=98  Identities=14%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC----eeeeCCChhhHHHHHH
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD----DAFNYKEEPDLDAALK  215 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~v~  215 (339)
                      |.+.....++++||=.|  .+.|..++.+++ .+.+|+++..++...+.+++.   .+..    .++..+    +.   .
T Consensus        44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d----~~---~  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----LY---E  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----TT---T
T ss_pred             HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcc----hh---h
Confidence            44667788999999888  466777777765 567999999998887777632   2332    122221    11   1


Q ss_pred             HhCCCCccEEEECC----Chh----hHHHHHHhhccCCEEEEE
Q 037444          216 RCFPQGIDIYFENV----GGK----MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       216 ~~~~g~~d~vid~~----g~~----~~~~~~~~l~~~G~~v~~  250 (339)
                      ...++.+|+|+...    +.+    .+..+.++|+++|+++.+
T Consensus       114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            12234799999732    322    467888999999998654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.68  E-value=0.016  Score=47.73  Aligned_cols=95  Identities=13%  Similarity=-0.007  Sum_probs=61.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCC-----eeeeCCChhhHHHHHHHhCCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF---GFD-----DAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~---g~~-----~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .+++.+||=.|  .|.|..++.+|+. |++|+++..|++-++.+++..   +..     ..+..-   ++...-.....+
T Consensus        54 ~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  127 (292)
T d1xvaa_          54 QHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVPAG  127 (292)
T ss_dssp             HTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSCCT
T ss_pred             hcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccCCC
Confidence            35677888887  5778888888875 899999999998777765321   211     111111   111111222333


Q ss_pred             -CccEEEECCCh---------------hhHHHHHHhhccCCEEEE
Q 037444          221 -GIDIYFENVGG---------------KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       221 -~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  249 (339)
                       .+|.|+.....               ..+..+.+.|+++|.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence             89999864321               157889999999999875

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.65  E-value=0.5  Score=34.08  Aligned_cols=94  Identities=16%  Similarity=0.129  Sum_probs=62.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCH--HHH-HHHHHHhCCCeeeeCCChhhH---H--------------
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSK--EKV-DLLKNKFGFDDAFNYKEEPDL---D--------------  211 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~--~~~-~~~~~~~g~~~v~~~~~~~~~---~--------------  211 (339)
                      +|.|.|++|.+|.-+..+.+..  ..+|.+.+...  +.+ +.++ ++.+..++-.++. ..   .              
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~-~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~   80 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCL-EFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLS   80 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHH-HHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHH-HHhhcccccccHH-HHHHHHHHhhhhcccccccc
Confidence            6899999999999999999877  34777776433  222 2233 6787776655432 21   1              


Q ss_pred             --HHHHHhCCC-CccEEEECCCh-hhHHHHHHhhccCCEEEE
Q 037444          212 --AALKRCFPQ-GIDIYFENVGG-KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       212 --~~v~~~~~g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  249 (339)
                        +.+.+.... .+|+|+.++.+ .-+.-.+..++.+-++..
T Consensus        81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence              122222222 68999998876 678888888888766443

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.63  E-value=0.022  Score=40.45  Aligned_cols=72  Identities=14%  Similarity=0.059  Sum_probs=48.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKM  233 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~  233 (339)
                      +|.|+|++|-+|++..+++...|.+++.......           ...+                 ..+|++||++..+.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-----------~~~~-----------------~~~DVvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-----------VEEL-----------------DSPDVVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-----------EEEC-----------------SCCSEEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-----------HHHh-----------------ccCCEEEEecCHHH
Confidence            6899999999999999999988887766542110           0000                 14788888887765


Q ss_pred             HHHHHHhhccCCEEEEEecc
Q 037444          234 LDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       234 ~~~~~~~l~~~G~~v~~g~~  253 (339)
                      ....++.....+.=+.+|.+
T Consensus        54 ~~~~l~~~~~~~~p~ViGTT   73 (128)
T d1vm6a3          54 LPKTVDLCKKYRAGLVLGTT   73 (128)
T ss_dssp             HHHHHHHHHHHTCEEEECCC
T ss_pred             HHHHHHHHHhcCCCEEEEcC
Confidence            55555555555554556654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.58  E-value=0.056  Score=41.28  Aligned_cols=89  Identities=21%  Similarity=0.175  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -.|.+|.|+|. |.+|..++++++.+|++|++..+.... +... ..+...+   .   ++.+-+++     .|+|.-++
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~~---~---~l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQRV---S---TLQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEEC---S---SHHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchh-hhccccc---c---chhhcccc-----CCEEEEee
Confidence            46789999995 999999999999999999999875442 2222 3343211   1   44444443     68887766


Q ss_pred             Ch-h-----hHHHHHHhhccCCEEEEEec
Q 037444          230 GG-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .. +     .-...++.++++..+|.++.
T Consensus       113 plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCCCeEEecCC
Confidence            52 2     12367788888888887755

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.55  E-value=0.038  Score=46.69  Aligned_cols=75  Identities=19%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.+|||+||+|-+|..++..+...|.+|+++.+...... .. ..........+-. +........  .++|.|+.+.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~-~~~~~~~~~~D~~-~~~~~~~~~--~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TE-DMFCDEFHLVDLR-VMENCLKVT--EGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CG-GGTCSEEEECCTT-SHHHHHHHH--TTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hh-hcccCcEEEeech-hHHHHHHHh--hcCCeEeeccc
Confidence            5789999999999999999999999999999975433211 11 1222222222222 333333322  26999999774

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.55  E-value=0.085  Score=42.93  Aligned_cols=35  Identities=11%  Similarity=0.065  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      -.+|||+||+|-+|..++..+...|.+|++++|+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence            35799999999999999998888999999998764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.48  E-value=0.038  Score=43.63  Aligned_cols=102  Identities=12%  Similarity=0.066  Sum_probs=65.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCC---CeeeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGF---DDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      +...+++|++||=.|+  +.|..+..+|+.. +.+|+++..+++-.+.+++....   ...+..+.. .. ...... ..
T Consensus        68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~~~~-~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-KP-QEYANI-VE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-CG-GGGTTT-CC
T ss_pred             HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-cC-cccccc-cc
Confidence            4467899999999995  5678888888875 35999999999888777732211   122222221 11 111111 11


Q ss_pred             CccEEEECCCh-----hhHHHHHHhhccCCEEEEEe
Q 037444          221 GIDIYFENVGG-----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       221 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+|+++.....     ..+.++.+.|+++|+++.+-
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            46667665542     14778889999999987653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.48  E-value=0.056  Score=40.95  Aligned_cols=87  Identities=24%  Similarity=0.218  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.++.|.|. |.+|..++++++.+|.+|++..+........  ..+...    .   ++.+.+++     .|+|+-++.
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~~----~---~l~ell~~-----sDiv~~~~P  107 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIEL----L---SLDDLLAR-----ADFISVHLP  107 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCEE----C---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh--hcCcee----c---cHHHHHhh-----CCEEEEcCC
Confidence            5789999995 9999999999999999999998765543322  333321    1   44444433     788888776


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      - +     .=...++.++++..+|.++.
T Consensus       108 lt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1         108 KTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            2 2     12477888888888888765

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.39  E-value=0.019  Score=46.13  Aligned_cols=34  Identities=18%  Similarity=0.282  Sum_probs=30.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .|||+||++++|.++++.+...|++|+++.++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            4799999999999999999999999999987643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.37  E-value=0.38  Score=34.63  Aligned_cols=78  Identities=10%  Similarity=-0.017  Sum_probs=54.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC--CccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ--GIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g--~~d~vid~~g  230 (339)
                      .+|.|+|+.|.+|...+..++..|.+|.+..++.+...... ..+++.++...........+.+..+.  .=.+++|+..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            48999997899999999999999999999998776544444 45666666554432444444444332  2357888877


Q ss_pred             h
Q 037444          231 G  231 (339)
Q Consensus       231 ~  231 (339)
                      .
T Consensus        89 v   89 (152)
T d2pv7a2          89 V   89 (152)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.29  E-value=0.11  Score=40.70  Aligned_cols=49  Identities=22%  Similarity=0.174  Sum_probs=42.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD  199 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~  199 (339)
                      -.|.+|+|.| .|.+|..+++++...|++|+++..+..+.+.+.+..|..
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            4788999999 599999999999999999999999888887777566664

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.27  E-value=0.26  Score=36.63  Aligned_cols=97  Identities=15%  Similarity=0.074  Sum_probs=61.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC--CHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhC----------CC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAG--SKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF----------PQ  220 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~----------~g  220 (339)
                      +|.|.| .|-+|..+++.+... ..+++++..  +.+....+. ..+.+... .... ... ......          ..
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASEE-FIP-RFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSGG-GHH-HHHHHTCCCSCBHHHHHT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-cccc-cee-eecccCccccchhhhhhc
Confidence            689999 599999988877655 457777652  234445555 55544222 1111 111 111110          02


Q ss_pred             CccEEEECCCh-hhHHHHHHhhccCCEEEEEecccc
Q 037444          221 GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMISQ  255 (339)
Q Consensus       221 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~  255 (339)
                      ++|+|+||+|. ...+.+-.++..+-+.|.++.+..
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            69999999996 577788889999989888876443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=94.26  E-value=0.093  Score=43.89  Aligned_cols=38  Identities=21%  Similarity=0.178  Sum_probs=33.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEK  188 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~  188 (339)
                      .-.+|+|+||+|.+|..++..+...|.+|++++|+..+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            45689999999999999999988899999999987543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.21  E-value=0.077  Score=44.12  Aligned_cols=101  Identities=17%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhC--CCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCF--PQG  221 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~--~g~  221 (339)
                      .+++|++||=.+  ++.|..++.+|+. |+ +|+++..+++..+.+++   ..|....+..... |..+.+....  ++.
T Consensus       142 ~~~~g~~VLDl~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeeccc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence            367899987766  4566666666654 66 89999999988777764   2444321211122 4444444332  238


Q ss_pred             ccEEEECCC----h------------hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVG----G------------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g----~------------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ||+|+---.    +            +.+..++++|+++|.++.+..
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~  264 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC  264 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            999986221    1            135667889999999988754

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.12  E-value=0.76  Score=34.11  Aligned_cols=91  Identities=13%  Similarity=0.122  Sum_probs=59.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCCe-eeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSA-GSKEKVDLLKNKFGFDD-AFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~-~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      ++.|.|. |.+|...++.++.. +.++++++ ++.++.+.+.++++... .-.++   ++.+.+.   ...+|+|+-|+.
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~---~~~iD~v~I~tp   75 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLE---DPEIDALYVPLP   75 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHH---CTTCCEEEECCC
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhh---ccccceeeeccc
Confidence            6889995 89999888877776 66888765 55556555554676532 11122   3333332   137999999998


Q ss_pred             h-hhHHHHHHhhccCCEEEEEec
Q 037444          231 G-KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . .+++.+..++..+ .=+.+.-
T Consensus        76 ~~~h~~~~~~~l~~g-~~v~~EK   97 (184)
T d1ydwa1          76 TSLHVEWAIKAAEKG-KHILLEK   97 (184)
T ss_dssp             GGGHHHHHHHHHTTT-CEEEECS
T ss_pred             chhhcchhhhhhhcc-ceeeccc
Confidence            6 4777888888865 4455643

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.11  E-value=0.22  Score=36.42  Aligned_cols=86  Identities=14%  Similarity=0.075  Sum_probs=59.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh-h
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG-K  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~-~  232 (339)
                      +|-|+|- |.+|...++-+...|.+|++..+++++.+.++ +.++.. .  .   +..+.++     ..|++|-|+.. +
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~-~--~---~~~e~~~-----~~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET-A--S---TAKAIAE-----QCDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C--S---SHHHHHH-----HCSEEEECCSSHH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh-c--c---cHHHHHh-----CCCeEEEEcCCHH
Confidence            5889994 99999988877788999999999999999888 766632 1  1   2233333     37899999874 3


Q ss_pred             hHHHH-------HHhhccCCEEEEEec
Q 037444          233 MLDAV-------LLNMRLRGRIAVCGM  252 (339)
Q Consensus       233 ~~~~~-------~~~l~~~G~~v~~g~  252 (339)
                      ..+..       ...+.++-.++.++.
T Consensus        69 ~v~~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHhCCcchhhccCCCCEEEECCC
Confidence            44332       344555566666644

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.11  E-value=0.053  Score=43.61  Aligned_cols=94  Identities=15%  Similarity=0.074  Sum_probs=64.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC---eeeeCCChhhHHHHHHHhCCC-C
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD---DAFNYKEEPDLDAALKRCFPQ-G  221 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~v~~~~~g-~  221 (339)
                      +++|++||-.+  .++|..++.+|+.-+++|+++..+++..+.+++.   .|.+   .++..+..        ++... .
T Consensus       105 ~~~g~~VlD~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~--------~~~~~~~  174 (260)
T d2frna1         105 AKPDELVVDMF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR--------DFPGENI  174 (260)
T ss_dssp             CCTTCEEEETT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT--------TCCCCSC
T ss_pred             cCCccEEEECc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH--------HhccCCC
Confidence            68999999887  4778888888887556999999999988777642   3442   23433321        22233 7


Q ss_pred             ccEEEE-CCC--hhhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFE-NVG--GKMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid-~~g--~~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|.|+- .-.  ...+..+++.++++|.+.....
T Consensus       175 ~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         175 ADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             EEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            896653 222  3478899999999998765543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.09  E-value=0.082  Score=39.66  Aligned_cols=54  Identities=17%  Similarity=0.159  Sum_probs=39.5

Q ss_pred             HHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Q 037444          141 AGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKF  196 (339)
Q Consensus       141 ~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~  196 (339)
                      .+|.+...--+|.+|+|.|+ |+++.+++..+...| +|+++.|+.++.+.+.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            34444433357889999996 999998887765555 9999999998877665333

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.06  E-value=0.097  Score=39.82  Aligned_cols=89  Identities=10%  Similarity=0.029  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.++.|+|. |.+|..++++++.+|.+|+...+......... ..+..   ...   ++.+.+.+     .|+|.-++.
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~---~~~---~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQAT---FHD---SLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTCE---ECS---SHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-ccccc---ccC---CHHHHHhh-----CCeEEecCC
Confidence            4789999996 99999999999999999999886544322222 22221   111   44444443     688887765


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      - +     .-...++.++++..+|.++.
T Consensus       113 lt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCccEEEecCC
Confidence            2 2     12477888998888888765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=94.00  E-value=0.021  Score=47.83  Aligned_cols=72  Identities=13%  Similarity=0.069  Sum_probs=44.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhCCCeeeeCC--ChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKFGFDDAFNYK--EEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|-+|..+++.+...| .+|++++....+...+.+..+. ..+..+  ...++.+.+.    .++|+||.+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~-~~i~~Di~~~~~~~~~~~----~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHV----KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHH----HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCe-EEEECccCChHHHHHHHH----hCCCccccccc
Confidence            79999999999999998777777 5999997765443333211111 223221  1113333222    25999999887

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.95  E-value=0.089  Score=41.02  Aligned_cols=98  Identities=10%  Similarity=0.086  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHHh---CCCeeeeCCChhhHHHHHHHhCCCC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKL---AGCYVVGSAGSKEKVDLLKNKF---GFDDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~---~ga~V~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      .++++.+||=+|  .|.|..+..+++.   .+++|+++..|++-.+.+++.+   +....+..... +    ......+.
T Consensus        36 ~~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d----~~~~~~~~  108 (225)
T d1im8a_          36 FVTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-D----IRHVEIKN  108 (225)
T ss_dssp             HCCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-C----TTTCCCCS
T ss_pred             hcCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-h----hhcccccc
Confidence            368999999998  5678777888875   4789999999999888887433   22211111111 1    11222236


Q ss_pred             ccEEEECCCh---------hhHHHHHHhhccCCEEEEEec
Q 037444          222 IDIYFENVGG---------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       222 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+++.+..-         ..++++.+.|+++|.++....
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            7777664331         258899999999999987643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.013  Score=48.61  Aligned_cols=32  Identities=16%  Similarity=0.229  Sum_probs=29.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      .+|||+||+|-+|..++..+...|.+|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            47999999999999999888888999999875

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.84  E-value=0.052  Score=41.91  Aligned_cols=68  Identities=16%  Similarity=0.106  Sum_probs=43.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|||+||+|-+|..+++.+...|.  +|++..+++.         ....-+..... ++.+. .....+.+|.||+|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~---------~~~~~~~~~~~-d~~~~-~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL---------AEHPRLDNPVG-PLAEL-LPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC---------CCCTTEECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch---------hhccccccccc-chhhh-hhccccchheeeeeee
Confidence            5899999999999999998887876  6777665421         11111222222 44332 3333347899999987


Q ss_pred             h
Q 037444          231 G  231 (339)
Q Consensus       231 ~  231 (339)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.81  E-value=0.11  Score=43.30  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=28.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      ..|||+||+|-+|..++..+...|.+|+++.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence            36899999999999999888888999999853

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.73  E-value=0.027  Score=35.94  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=30.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      .+|.|.|+ |.+|.+.++-|+.+|.++.+.+..++
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            37899996 99999999999999999999996543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.66  E-value=0.69  Score=33.21  Aligned_cols=96  Identities=10%  Similarity=-0.020  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKV-DLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~-~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -+.++|.|. |.+|..+++.+...|.+|+++...+++. +.+.+.... -.++..+.  .-.+.+++..-..+|.++-+.
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~--~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDS--NDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCT--TSHHHHHHHTTTTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccC--cchHHHHHhccccCCEEEEcc
Confidence            357999996 9999999999999999999998776543 333312222 23444433  223445554334799999999


Q ss_pred             Chhh--HH--HHHHhhccCCEEEEE
Q 037444          230 GGKM--LD--AVLLNMRLRGRIAVC  250 (339)
Q Consensus       230 g~~~--~~--~~~~~l~~~G~~v~~  250 (339)
                      +.+.  +.  ...+.+.+.-+++..
T Consensus        80 ~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          80 DNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             SCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             ccHHHHHHHHHHHHHhCCCCceEEE
Confidence            8652  22  233444455555544

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.65  E-value=1.4  Score=35.40  Aligned_cols=106  Identities=14%  Similarity=0.140  Sum_probs=65.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCeee-eCCC--------------
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDDAF-NYKE--------------  206 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~v~-~~~~--------------  206 (339)
                      +.+.+.++.+|+. ..+|..|+++...|+.+|.+++++..   ++.+.+.++ .+|+.-++ ....              
T Consensus        53 ~~g~~~~~~~vv~-aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~  130 (292)
T d2bhsa1          53 KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMAN  130 (292)
T ss_dssp             HTTSCCTTSEEEE-ECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeee-ecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccc
Confidence            4455666665544 44699999999999999997666653   556777777 88885322 1111              


Q ss_pred             ------------hhh-------HHHHHHHhCCCCccEEEECCCh-hhH---HHHHHhhccCCEEEEEec
Q 037444          207 ------------EPD-------LDAALKRCFPQGIDIYFENVGG-KML---DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       207 ------------~~~-------~~~~v~~~~~g~~d~vid~~g~-~~~---~~~~~~l~~~G~~v~~g~  252 (339)
                                  ...       ...++.+..++.+|.++.++|+ ..+   ...++.+.+..+++.+..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                        000       1122333344478999999885 333   345555666778776654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.65  E-value=0.19  Score=38.15  Aligned_cols=93  Identities=14%  Similarity=0.090  Sum_probs=60.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHhCCCCcc
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      +++| +||=+|.  +.|..+..+++ .|++|+++..+++..+.+++   ..+.+.  +...+-. ++      ...+.||
T Consensus        29 ~~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~-~~------~~~~~fD   97 (198)
T d2i6ga1          29 VAPG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLN-TL------TFDGEYD   97 (198)
T ss_dssp             SCSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTT-TC------CCCCCEE
T ss_pred             CCCC-cEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecc-cc------ccccccc
Confidence            4455 8988883  58888888876 58999999999987776652   334432  1111111 10      0124799


Q ss_pred             EEEECCC-----h----hhHHHHHHhhccCCEEEEEec
Q 037444          224 IYFENVG-----G----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       224 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +|+...-     .    ..++.+.++|+++|.++....
T Consensus        98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9987331     1    256778889999999887644

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.64  E-value=0.21  Score=37.68  Aligned_cols=40  Identities=13%  Similarity=0.057  Sum_probs=34.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      ++|.|+|+ |.+|...+.++...|.+|+....+++..+...
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence            57999997 99999988888888999999999988765544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.48  E-value=0.15  Score=38.56  Aligned_cols=83  Identities=16%  Similarity=0.097  Sum_probs=56.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC--C----eeeeCCC--hhhHHHHHHHhCCCCccE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF--D----DAFNYKE--EPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~--~----~v~~~~~--~~~~~~~v~~~~~g~~d~  224 (339)
                      .+|.|+|+ |..|.+...++...|-+|....++++..+.+. +-+.  .    ..+..+-  ..++.+.+     .+.|+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~   80 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEI   80 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccchhhhhcc-----CCCCE
Confidence            36999996 99999999888888889999999999888776 3321  1    1111000  00333333     24899


Q ss_pred             EEECCChhhHHHHHHhhc
Q 037444          225 YFENVGGKMLDAVLLNMR  242 (339)
Q Consensus       225 vid~~g~~~~~~~~~~l~  242 (339)
                      +|-++.+..+...++.++
T Consensus        81 iiiavPs~~~~~~~~~~~   98 (189)
T d1n1ea2          81 ILFVIPTQFLRGFFEKSG   98 (189)
T ss_dssp             EEECSCHHHHHHHHHHHC
T ss_pred             EEEcCcHHHHHHHHHHHH
Confidence            999999887777666554

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=93.45  E-value=0.16  Score=40.45  Aligned_cols=100  Identities=8%  Similarity=0.001  Sum_probs=67.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhC--CCCc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCF--PQGI  222 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~--~g~~  222 (339)
                      +.....++.+||=.|  .+.|..+.+++...+.+|+++..+++-.+.+++.+.....+++... +    +.++.  ++.+
T Consensus        87 ~~l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d----~~~~~~~~~~f  159 (254)
T d1xtpa_          87 ASLPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-S----METATLPPNTY  159 (254)
T ss_dssp             HTSTTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-C----GGGCCCCSSCE
T ss_pred             hhCCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-c----ccccccCCCcc
Confidence            334456677888887  5778888998887777999999999988988855543322322211 2    11222  2479


Q ss_pred             cEEEECCC-----h----hhHHHHHHhhccCCEEEEEe
Q 037444          223 DIYFENVG-----G----KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       223 d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g  251 (339)
                      |+|+....     .    ..+.++.+.|+++|.++...
T Consensus       160 D~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            99987442     1    14678889999999988654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.45  E-value=0.087  Score=39.98  Aligned_cols=89  Identities=13%  Similarity=-0.024  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.++.|.|. |.+|..++++++.+|.+|+...+........+ ..+...   ..   ++.+.++     ..|+|+-+..
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGG-----GCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHH-----hccchhhccc
Confidence            5789999995 99999999999999999999987543333333 444321   11   3333322     3788877665


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      - +     .-.+.++.|+++..+|.++.
T Consensus       110 lt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            2 2     23467788888888777654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.42  E-value=0.11  Score=36.08  Aligned_cols=41  Identities=20%  Similarity=0.126  Sum_probs=35.6

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +.....++.+|+|.|+ |.+|+-.++.++.+|.+|..+.+++
T Consensus        15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4456678999999997 9999999999999999999998764

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.27  E-value=1  Score=32.78  Aligned_cols=134  Identities=12%  Similarity=0.089  Sum_probs=77.4

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCCh
Q 037444          154 YVYVSAASGAVGQL-VGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGG  231 (339)
Q Consensus       154 ~vlI~ga~g~~G~~-ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~  231 (339)
                      +|.|.|. |.+|.- .+...+.. +.++++...++++.+.+.+.++...+++.-+     +.+    ...+|+|+-|+..
T Consensus         3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~ll----~~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR-----DVL----QYGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT-----GGG----GGCCSEEEECSCG
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH-----Hhc----ccccceecccccc
Confidence            6889995 888854 45565555 5587777778888777775788755443211     112    1258999999886


Q ss_pred             h-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHH-hccccc-cceecccccchhHHHHHHHHHHHHcCCcee
Q 037444          232 K-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLI-GKRIRL-EGFLAGDYYHLYPKFLELVIPAIREGKMVY  307 (339)
Q Consensus       232 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~  307 (339)
                      . +.+.+..++..+=. |.+.-+-..+..   ......... .++..+ .++      .++...+.++.+.+..|++..
T Consensus        73 ~~H~~~~~~al~~gk~-V~~EKP~~~~~~---e~~~l~~~a~~~~~~~~vg~------~r~~~~~~~~~~~~~~G~ig~  141 (167)
T d1xeaa1          73 DVHSTLAAFFLHLGIP-TFVDKPLAASAQ---ECENLYELAEKHHQPLYVGF------NGFDAMVQDWLQVAAAGKLPT  141 (167)
T ss_dssp             GGHHHHHHHHHHTTCC-EEEESCSCSSHH---HHHHHHHHHHHTTCCEEEEC------GTHHHHHHHHHHHHHHTCCCH
T ss_pred             cccccccccccccccc-cccCCCCcCCHH---HHHHHHHHHHHcCCEEEEEe------CcCCHHHHHHHHHhhcCCCCc
Confidence            4 77778888887644 555443221100   000111111 122221 121      123456778888888888763

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.17  E-value=0.021  Score=42.36  Aligned_cols=87  Identities=15%  Similarity=0.104  Sum_probs=54.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCC-----eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFD-----DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      .+|+|+|+ |.+|.+....+...|.+|..+.+++++.+... ..+..     ..+....    .+.+     +.+|++|-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~-----~~~D~iii   69 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTAND----PDFL-----ATSDLLLV   69 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESC----HHHH-----HTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccch----hhhh-----cccceEEE
Confidence            37999997 99999988888888999999998876433222 22221     1111221    1222     25899999


Q ss_pred             CCChhhHHHHHHhh----ccCCEEEEE
Q 037444          228 NVGGKMLDAVLLNM----RLRGRIAVC  250 (339)
Q Consensus       228 ~~g~~~~~~~~~~l----~~~G~~v~~  250 (339)
                      ++-....+.+++.+    .++..++.+
T Consensus        70 ~vka~~~~~~~~~l~~~~~~~~~Iv~~   96 (167)
T d1ks9a2          70 TLKAWQVSDAVKSLASTLPVTTPILLI   96 (167)
T ss_dssp             CSCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred             eecccchHHHHHhhccccCcccEEeec
Confidence            99876555555444    344555554

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=93.12  E-value=0.0069  Score=45.19  Aligned_cols=93  Identities=17%  Similarity=0.110  Sum_probs=56.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhC----CC--eeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFG----FD--DAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g----~~--~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      -+|.|+|++|-+|+++++++... +.++.+...++.....-+ .+|    ..  .+...++       +.. ....+|++
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~~-------~~~-~~~~~DVi   75 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQSS-------LDA-VKDDFDVF   75 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEESC-------STT-TTTSCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeecc-------HHH-HhcccceE
Confidence            37899999999999999988765 667766654332110000 111    10  0000111       001 11268999


Q ss_pred             EECCChhhHHHHHHhhccCCEEEEEeccc
Q 037444          226 FENVGGKMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       226 id~~g~~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ||++-.+.....++.....|.=+.+|.++
T Consensus        76 IDFs~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          76 IDFTRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             EEeccHHHHHHHHHHHHhccceeEEecCC
Confidence            99999877777777777777777787654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.07  E-value=0.078  Score=37.07  Aligned_cols=33  Identities=21%  Similarity=0.008  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .++++|+|| |.+|+-.+++++.+|++|.++.++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            468999997 999999999999999999999854

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.22  Score=36.89  Aligned_cols=97  Identities=15%  Similarity=0.111  Sum_probs=66.0

Q ss_pred             cccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhh
Q 037444          130 GILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPD  209 (339)
Q Consensus       130 a~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~  209 (339)
                      +-+|++....+..|.+..---.|.+|+|.|.+.-+|.-+..++...|++|+.......+                     
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~---------------------   75 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH---------------------   75 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc---------------------
Confidence            44566655555556443333489999999999999999999999999999987643222                     


Q ss_pred             HHHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          210 LDAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       210 ~~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +.+.+     ...|+++-++|...+- --.+++++-.++++|..
T Consensus        76 l~~~~-----~~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          76 LDEEV-----NKGDILVVATGQPEMV-KGEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             HHHHH-----TTCSEEEECCCCTTCB-CGGGSCTTCEEEECCCB
T ss_pred             HHHHH-----hhccchhhcccccccc-ccccccCCCeEeccCcc
Confidence            11111     1378888888865331 13578888888888753

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.70  E-value=0.17  Score=37.26  Aligned_cols=96  Identities=17%  Similarity=0.060  Sum_probs=65.5

Q ss_pred             ccCchhhhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhH
Q 037444          131 ILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDL  210 (339)
Q Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~  210 (339)
                      -+|++....+..|.+..---.|.+++|.|.+.-+|.-+..++...||+|+..-....                     ++
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l   74 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NL   74 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CH
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hh
Confidence            455555555555544333357999999999999999999999999999976643221                     23


Q ss_pred             HHHHHHhCCCCccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          211 DAALKRCFPQGIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      .+.+++     .|+++-++|.+.+- --++++++-.++++|..
T Consensus        75 ~~~~~~-----ADivI~a~G~p~~i-~~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          75 RHHVEN-----ADLLIVAVGKPGFI-PGDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHHHHH-----CSEEEECSCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred             HHHHhh-----hhHhhhhccCcccc-cccccCCCcEEEecCce
Confidence            333332     78999999865221 13577888888888864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.63  E-value=0.051  Score=41.19  Aligned_cols=34  Identities=12%  Similarity=0.074  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~  186 (339)
                      +.+|+|+|| |..|+.++..++..|. +|.++.+++
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            578999997 9999999999999998 588888764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.63  E-value=0.17  Score=39.15  Aligned_cols=100  Identities=17%  Similarity=0.165  Sum_probs=61.9

Q ss_pred             hcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH---HhCCCe---eeeCCChhhHHHHHHHh
Q 037444          146 VCSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKN---KFGFDD---AFNYKEEPDLDAALKRC  217 (339)
Q Consensus       146 ~~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~v~~~  217 (339)
                      ..+..+..+||=+|  ++.|..++.+|+++  +.+|+.+..+++..+.+++   ..|...   ++..+.. +..+.+...
T Consensus        51 lv~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~-e~l~~l~~~  127 (214)
T d2cl5a1          51 VIREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ-DLIPQLKKK  127 (214)
T ss_dssp             HHHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH-HHGGGHHHH
T ss_pred             HHHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc-ccccchhhc
Confidence            33444567899998  57788888888876  5799999999887666642   456533   2222222 222333333


Q ss_pred             CC-CCccEEEECCC-hh-----hHHHHHHhhccCCEEE
Q 037444          218 FP-QGIDIYFENVG-GK-----MLDAVLLNMRLRGRIA  248 (339)
Q Consensus       218 ~~-g~~d~vid~~g-~~-----~~~~~~~~l~~~G~~v  248 (339)
                      .. +.+|++|--.. ..     .+.+++++|++||.++
T Consensus       128 ~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         128 YDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             SCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ccccccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            33 37998774333 22     2455677899998654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.59  E-value=0.079  Score=43.63  Aligned_cols=34  Identities=18%  Similarity=0.268  Sum_probs=30.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .+|||+||+|-+|..++..+...|.+|+++++..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            3799999999999999998888899999998754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.48  E-value=0.067  Score=42.57  Aligned_cols=34  Identities=18%  Similarity=0.074  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      ..++|+|+|| |..|++++..++..|.+|+++.++
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERS   36 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            3578999997 999999999998899999999864

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.35  E-value=0.3  Score=40.43  Aligned_cols=31  Identities=26%  Similarity=0.154  Sum_probs=28.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSA  183 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~  183 (339)
                      .+|||+||+|-+|..++..+...|.+|+++.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            5899999999999999998888999999985

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.33  E-value=0.13  Score=35.49  Aligned_cols=38  Identities=13%  Similarity=0.017  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++...+|+|.|| |.+|.-++..++.+|.+|.++.+++
T Consensus        18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            4555689999997 9999999999999999999999763

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.29  E-value=0.079  Score=38.55  Aligned_cols=80  Identities=14%  Similarity=0.101  Sum_probs=49.9

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChhhHH
Q 037444          156 YVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGKMLD  235 (339)
Q Consensus       156 lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~~~~  235 (339)
                      -++|. |.+|.+.++.++..+..+.+..|+.++.+.+.+..+. ...+..+.           -...|+||-|+..+.+.
T Consensus         3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~-----------~~~~DiVil~v~d~~i~   69 (153)
T d2i76a2           3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATLEKH-----------PELNGVVFVIVPDRYIK   69 (153)
T ss_dssp             EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC-----------CC---CEEECSCTTTHH
T ss_pred             EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccchhhh-----------hccCcEEEEeccchhhh
Confidence            46774 9999988776654333345778999998888844443 22222211           12579999999988888


Q ss_pred             HHHHhhccCCEEE
Q 037444          236 AVLLNMRLRGRIA  248 (339)
Q Consensus       236 ~~~~~l~~~G~~v  248 (339)
                      .....|+..|+++
T Consensus        70 ~v~~~l~~~~~iv   82 (153)
T d2i76a2          70 TVANHLNLGDAVL   82 (153)
T ss_dssp             HHHTTTCCSSCCE
T ss_pred             HHHhhhcccceee
Confidence            8888887655543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.27  E-value=0.068  Score=44.31  Aligned_cols=97  Identities=22%  Similarity=0.127  Sum_probs=54.8

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhHHHHH
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDLDAAL  214 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~v  214 (339)
                      ++.+...+.+|++||-+|+  |.|..++.+|+ .|| +|+++..++.- ..+++   ..+..   .++..+.. ++    
T Consensus        24 ai~~~~~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~~-~~----   94 (316)
T d1oria_          24 SMFHNRHLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKVE-EV----   94 (316)
T ss_dssp             HHHTCHHHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCTT-TC----
T ss_pred             HHHhccccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccHH-Hc----
Confidence            3433334568999999984  34777766665 687 89999987642 22221   33442   23333222 21    


Q ss_pred             HHhCCCCccEEEECCC-----h-h----hHHHHHHhhccCCEEE
Q 037444          215 KRCFPQGIDIYFENVG-----G-K----MLDAVLLNMRLRGRIA  248 (339)
Q Consensus       215 ~~~~~g~~d~vid~~g-----~-~----~~~~~~~~l~~~G~~v  248 (339)
                       ....+.+|+|+.-..     . .    .+...-++|+++|+++
T Consensus        95 -~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          95 -ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             -CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             -ccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence             011237999976322     1 1    2334557999999876

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.23  E-value=0.67  Score=34.22  Aligned_cols=44  Identities=16%  Similarity=-0.006  Sum_probs=36.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      .+|-++|- |.+|...+.-+...|.+|++..+++++.+.+. +.++
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~   46 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEA   46 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhcc
Confidence            35889995 99999988888888999999999999988887 5444

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.22  E-value=0.21  Score=34.80  Aligned_cols=41  Identities=17%  Similarity=0.008  Sum_probs=34.0

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +...-..+.+|+|.|| |.+|+-+++.++.+|.+|+++.+.+
T Consensus        23 ~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            4334456789999997 9999999999999999999998653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.19  E-value=0.82  Score=37.55  Aligned_cols=32  Identities=16%  Similarity=0.130  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      .++||+||+|-+|..++..+...|.+|+++++
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            47999999999999999999999999999974

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.18  E-value=0.99  Score=33.21  Aligned_cols=97  Identities=14%  Similarity=0.111  Sum_probs=57.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC--HHHHHHHHHHhCCCeeeeCCChh-hHHH-------HHHHhCCCCc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGS--KEKVDLLKNKFGFDDAFNYKEEP-DLDA-------ALKRCFPQGI  222 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~--~~~~~~~~~~~g~~~v~~~~~~~-~~~~-------~v~~~~~g~~  222 (339)
                      +|.|.| -|-+|..+.+++...+ .+++++...  ......+. ..+.+......+.. .+.+       .+.++. .++
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v   79 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA   79 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence            688998 6999999999876664 577766422  23334444 45544222111100 0000       001110 268


Q ss_pred             cEEEECCCh-hhHHHHHHhhccCCEEEEEecc
Q 037444          223 DIYFENVGG-KMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       223 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      |+|+||+|. ...+.+-.++..+-+.|..+.+
T Consensus        80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             SEEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             CEEEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999996 5667788888888787776543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.12  E-value=0.14  Score=35.38  Aligned_cols=35  Identities=20%  Similarity=0.138  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ..++++|.|| |.+|+-+++.+..+|.+|.++.+.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            3478999997 9999999999999999999998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.01  E-value=0.23  Score=40.97  Aligned_cols=98  Identities=15%  Similarity=0.104  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCCe--eeeCCChhhHHHHHHHhCCCCccE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFDD--AFNYKEEPDLDAALKRCFPQGIDI  224 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~v~~~~~g~~d~  224 (339)
                      .+|++||=.++  +.|..++++|+ -+++|+++..++...+.+++   ..|.+.  ++..+.. ++.+.+.. .++.||+
T Consensus       144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-~~~~~~~~-~~~~fD~  218 (318)
T d1wxxa2         144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-DLLRRLEK-EGERFDL  218 (318)
T ss_dssp             CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-HHHHHHHH-TTCCEEE
T ss_pred             hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-HHhhhhHh-hhcCCCE
Confidence            46889887763  34555666664 35699999999988877764   245432  2333222 33333322 1238999


Q ss_pred             EEEC---CC--h-----------hhHHHHHHhhccCCEEEEEec
Q 037444          225 YFEN---VG--G-----------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       225 vid~---~g--~-----------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+--   .+  .           +.+..++++|+++|.++.+..
T Consensus       219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            9852   11  1           134578889999999988754

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.96  E-value=0.26  Score=39.98  Aligned_cols=96  Identities=20%  Similarity=0.121  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC--------CC-eeeeCCChhhHHHHHHHhCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFG--------FD-DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g--------~~-~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ..-++|||.|  ||-|..+-.+++..+. +|.++.-.++=.+.+++-+.        .. .++..    |..+.+++..+
T Consensus        79 ~~pk~VLiiG--gG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~----Da~~~l~~~~~  152 (290)
T d1xj5a_          79 PNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG----DGVAFLKNAAE  152 (290)
T ss_dssp             SCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES----CHHHHHHTSCT
T ss_pred             CCCcceEEec--CCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc----cHHHHHhhccc
Confidence            3457899999  4556666677887775 89999988887777773221        11 12222    44556666555


Q ss_pred             CCccEEEE-CCC----------hhhHHHHHHhhccCCEEEEEe
Q 037444          220 QGIDIYFE-NVG----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 g~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +.+|+||- +..          .+.++.+.++|+++|.++.-.
T Consensus       153 ~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         153 GSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            58997763 332          125788999999999998653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.95  E-value=0.85  Score=33.13  Aligned_cols=43  Identities=19%  Similarity=0.050  Sum_probs=36.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      +|.++| .|.+|...+.-+...|.+|++..++.++.+.+. ..+.
T Consensus         3 kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~   45 (162)
T d3cuma2           3 QIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGA   45 (162)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTC
T ss_pred             EEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhc
Confidence            688998 499999888777778999999999999988887 6665

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.95  E-value=0.096  Score=39.36  Aligned_cols=37  Identities=19%  Similarity=0.094  Sum_probs=32.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .....+|+|+|| |+.|+.++..+...|.+|++....+
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            345689999997 9999999999999999999998764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.93  E-value=0.064  Score=43.44  Aligned_cols=34  Identities=15%  Similarity=0.117  Sum_probs=31.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .+|||+||+|-+|..++..+...|.+|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCC
Confidence            5799999999999999999988999999999764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.67  E-value=0.49  Score=35.22  Aligned_cols=92  Identities=14%  Similarity=0.117  Sum_probs=54.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC--HHHHHHHHHHhCCCeeeeCCCh-----------hhHHHHHHHhCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGS--KEKVDLLKNKFGFDDAFNYKEE-----------PDLDAALKRCFP  219 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~--~~~~~~~~~~~g~~~v~~~~~~-----------~~~~~~v~~~~~  219 (339)
                      +|.|.| .|-+|+.+++.+... +.+++++...  ......+. ..+.......+..           .++....     
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----   75 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----   75 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhh-----
Confidence            688998 699999999988866 4688887542  23333333 3332211111100           0111111     


Q ss_pred             CCccEEEECCCh-hhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .++|+|+||+|. ...+.+-.++..+-+++..+.
T Consensus        76 ~~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~  109 (178)
T d1b7go1          76 KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGG  109 (178)
T ss_dssp             HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTT
T ss_pred             hcCCEEEECCCCcCCHHHHHHHHHcCCEEEEECC
Confidence            148999999996 466677778877767766544

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=91.59  E-value=1.3  Score=30.17  Aligned_cols=90  Identities=17%  Similarity=0.125  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +.++.+|+|.|-+|..|....+.++.+|-+|++-++..+.-+...   | -.|+|     ...+.+++ +  ++|.-+=+
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~---g-iPVf~-----tV~eAv~~-~--~~d~SvIf   71 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---G-VPVYD-----TVKEAVAH-H--EVDASIIF   71 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---T-EEEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE---C-CchHh-----hHHHHHHh-c--CCeEEEEe
Confidence            456789999999999999999999999999998886543221111   1 12442     33444544 2  46777777


Q ss_pred             CChh-hHHHHHHhhccCCEEEEE
Q 037444          229 VGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +.-. ....+++++..+=+++.+
T Consensus        72 VPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          72 VPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             eCHHHHHHHHHHHHhCCCcEEEE
Confidence            7754 556677777777666555

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=91.50  E-value=0.7  Score=33.38  Aligned_cols=147  Identities=13%  Similarity=0.027  Sum_probs=75.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhCCC-eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAG---CYVVGSAGSKEKVDLLKNKFGFD-DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~g---a~V~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      |-+|.|.||+|-+|.-+++++..+.   .++...+++...-..+. ..... ...+..+. +         ....|++|-
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~~-~---------~~~~d~~f~   69 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTET-A---------FEGVDIALF   69 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCTT-T---------TTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccchh-h---------hhhhhhhhh
Confidence            4589999999999999999998774   25655553321111000 00000 01111111 1         126899999


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEecccccCCCCCccccchHHHHhccccccceecccccchhHHHHHHHHHHHHcCCce
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVHNLEQLIGKRIRLEGFLAGDYYHLYPKFLELVIPAIREGKMV  306 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~  306 (339)
                      +.+.. ........+..+-++++.+..-..  . +..+.....+....+.-....+.. |.=....+.-+..++++|.++
T Consensus        70 ~~~~~~s~~~~~~~~~~~~~VIDlSsdfR~--~-~~~~~~~pe~n~~~~~~~~~iIAn-PgC~tt~i~~l~PL~~~~lik  145 (154)
T d2gz1a1          70 SAGSSTSAKYAPYAVKAGVVVVDNTSYFRQ--N-PDVPLVVPEVNAHALDAHNGIIAC-PNAAWNSVQIAETLHERGLVR  145 (154)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEECSSTTTT--C-TTSCBCCHHHHGGGGGGCCSEEEC-CCTHHHHHHHHHHHHHTTCCS
T ss_pred             ccCccchhhHHhhhccccceehhcChhhhc--c-CCcccccchhhHHHhcCcCceEEC-CCCHHHHHHHHHHHHHhcCCC
Confidence            99965 555566677778888887652221  1 111122222222211111111111 211223344467888899888


Q ss_pred             eeeeeee
Q 037444          307 YVEDIAE  313 (339)
Q Consensus       307 ~~~~~~~  313 (339)
                      +.....|
T Consensus       146 ~~~~~~~  152 (154)
T d2gz1a1         146 PTAELKF  152 (154)
T ss_dssp             CCSSCCS
T ss_pred             ccceeee
Confidence            7655433

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=91.49  E-value=0.25  Score=38.33  Aligned_cols=98  Identities=10%  Similarity=0.039  Sum_probs=61.6

Q ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC-CeeeeCCChhhHHHHHHHhCCCC
Q 037444          143 LYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF-DDAFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       143 l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      +.......++.+||=.|  .+.|..+..+++ .|.+|+++..+++..+.+++.+.- ..++..+-. ++      ..++.
T Consensus        12 ~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~-~~------~~~~~   81 (225)
T d2p7ia1          12 VRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFE-DA------QLPRR   81 (225)
T ss_dssp             HHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGG-GC------CCSSC
T ss_pred             HHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccc-cc------ccccc
Confidence            33444455677888887  466777776654 588999999999999988844332 122322211 11      12248


Q ss_pred             ccEEEECCC-----h--hhHHHHH-HhhccCCEEEEE
Q 037444          222 IDIYFENVG-----G--KMLDAVL-LNMRLRGRIAVC  250 (339)
Q Consensus       222 ~d~vid~~g-----~--~~~~~~~-~~l~~~G~~v~~  250 (339)
                      +|+|+..--     .  ..+.+.. ++|+++|.++..
T Consensus        82 fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          82 YDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            999985332     1  1355555 679999998764

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=91.45  E-value=1.4  Score=34.59  Aligned_cols=100  Identities=17%  Similarity=0.154  Sum_probs=62.8

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      +...+....+||=+|  ++.|..++.+++.. +++++++..+ +..+.+++   +.|....+..... |+.    +...+
T Consensus        74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~  145 (253)
T d1tw3a2          74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR  145 (253)
T ss_dssp             HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred             hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence            445677788999888  67889999999887 6799888864 33333332   3343211211111 211    11123


Q ss_pred             CccEEEECCC-----h----hhHHHHHHhhccCCEEEEEec
Q 037444          221 GIDIYFENVG-----G----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ++|+|+-..-     .    ..+.++.+.|+++|+++.+..
T Consensus       146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~  186 (253)
T d1tw3a2         146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER  186 (253)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence            7899885432     1    147789999999999987754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.41  E-value=0.24  Score=37.52  Aligned_cols=40  Identities=25%  Similarity=0.228  Sum_probs=34.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK  193 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~  193 (339)
                      ++|.|+|+ |.+|...++++...|.+|+....+++.++.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence            58999997 99999999999999999999999987665544

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.36  E-value=2  Score=31.65  Aligned_cols=137  Identities=12%  Similarity=0.041  Sum_probs=76.1

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-C-CEEEEEe-CCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQL-VGQFAKLA-G-CYVVGSA-GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~-ai~la~~~-g-a~V~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      ++.|+|. |.+|.- .+...+.. + .++++++ ++.++.+.+.+.++...+++     ++.+.+.   ...+|+|+-|+
T Consensus         5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeecccc---ccccceeeccc
Confidence            6889995 888864 46666654 3 3777665 45566666554777655442     4333332   23699999988


Q ss_pred             Chh-hHHHHHHhhccCCEEEEEecccccCCCCCcccc-chHHHHh-ccccc-cceecccccchhHHHHHHHHHHHHcCCc
Q 037444          230 GGK-MLDAVLLNMRLRGRIAVCGMISQYNLEKPEGVH-NLEQLIG-KRIRL-EGFLAGDYYHLYPKFLELVIPAIREGKM  305 (339)
Q Consensus       230 g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~g~~  305 (339)
                      ... +.+.+..++..+ .-|.+.-+-..+    .... ....... ++..+ .++...  ...+...+..+.+++.+|++
T Consensus        76 p~~~h~~~~~~al~~g-k~V~~EKPl~~~----~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRKG-VHVICEKPISTD----VETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEEEESSSSSS----HHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSCCC
T ss_pred             cccccccccccccccc-hhhhcCCCCcCC----HHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCCCC
Confidence            864 677777777765 555664432211    0000 0111111 12221 111111  12245668888999999987


Q ss_pred             e
Q 037444          306 V  306 (339)
Q Consensus       306 ~  306 (339)
                      -
T Consensus       149 g  149 (181)
T d1zh8a1         149 N  149 (181)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.31  E-value=0.1  Score=37.91  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      .|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            6889999997 99999999999999999999864

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=91.31  E-value=1.4  Score=29.93  Aligned_cols=90  Identities=18%  Similarity=0.181  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +.++.+|+|.|.+|.-|....+.++..|-+|.+-+...+.-+..   +| -.|+|     ...+.+++.   ++|.-+=+
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~---~g-iPVf~-----sV~eAv~~~---~~~~SvIf   70 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH---LG-LPVFN-----TVREAVAAT---GATASVIY   70 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEE---TT-EEEES-----SHHHHHHHH---CCCEEEEC
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCccc---CC-Cchhh-----HHHHHHHHh---CCCeEEEe
Confidence            35678999999999999999999999999998888653321111   11 12443     333444442   35666656


Q ss_pred             CChh-hHHHHHHhhccCCEEEEE
Q 037444          229 VGGK-MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       229 ~g~~-~~~~~~~~l~~~G~~v~~  250 (339)
                      +.-. ....+++.+..+=+++.+
T Consensus        71 VPp~~a~dA~~EAi~agI~~iV~   93 (119)
T d2nu7a1          71 VPAPFCKDSILEAIDAGIKLIIT   93 (119)
T ss_dssp             CCGGGHHHHHHHHHHTTCSEEEE
T ss_pred             ccHHHHHHHHHHHHHCCCCEEEE
Confidence            6653 555667777666555444

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.27  E-value=0.29  Score=38.46  Aligned_cols=89  Identities=16%  Similarity=0.059  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-eeeeCCChhhHHHHHHHhC-CCCccE
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DAFNYKEEPDLDAALKRCF-PQGIDI  224 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~v~~~~-~g~~d~  224 (339)
                      .++.+||=.|.  |.|..+..+++ .|.+|+++..|++-++.+++.   .|.. .++..    |    +..+. .+.+|+
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~----d----~~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ----D----ISNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC----C----GGGCCCSCCEEE
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeecc----c----hhhhcccccccc
Confidence            34578998884  46777777765 588999999999887777643   2332 23322    1    12222 348999


Q ss_pred             EEECCCh-----------hhHHHHHHhhccCCEEEE
Q 037444          225 YFENVGG-----------KMLDAVLLNMRLRGRIAV  249 (339)
Q Consensus       225 vid~~g~-----------~~~~~~~~~l~~~G~~v~  249 (339)
                      |+...+.           ..++.+.++|+++|.++.
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            9964331           146788899999999874

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.24  E-value=0.35  Score=39.60  Aligned_cols=98  Identities=14%  Similarity=0.107  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCC-CeeeeC-----CChhhHHHHHHHhCCCCc
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGF-DDAFNY-----KEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~-~~v~~~-----~~~~~~~~~v~~~~~g~~  222 (339)
                      ....+|||+|  |+-|..+-.+++.... +|.++.-.++=.+.+++-+.. ...++.     .-. |..+.+++ +.+.+
T Consensus       105 ~~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~y  180 (312)
T d2b2ca1         105 PDPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF  180 (312)
T ss_dssp             SSCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred             CCCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCC
Confidence            3457899999  4556667777787765 899999888888888732321 111111     111 45566665 44589


Q ss_pred             cEEEECCC-----------hhhHHHHHHhhccCCEEEEEe
Q 037444          223 DIYFENVG-----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       223 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      |+||--..           .+.++.+.++|+++|.++.-+
T Consensus       181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            99984221           124678889999999998754

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=91.16  E-value=0.13  Score=41.47  Aligned_cols=62  Identities=10%  Similarity=0.206  Sum_probs=38.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      +|||+||+|-+|..++..+...|. ++++.+...       .+    ..|..+...+.+.++..   ++|+||++.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~-------~~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK-------EF----CGDFSNPKGVAETVRKL---RPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS-------SS----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc-------cc----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence            699999999999999887766664 555543321       11    12222321233333322   6899999886

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.15  E-value=2  Score=31.37  Aligned_cols=98  Identities=14%  Similarity=0.098  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH---HhCCC-eeeeCCChhhHHHHHHHhCCCCcc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKN---KFGFD-DAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      .+.+|.+||=.+  ++.|...+..+ ..|++|+.+..+++..+.+++   .+|.. .+...+.. .+... .......||
T Consensus        38 ~~~~g~~vLDl~--~G~G~~~i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d-~~~~~-~~~~~~~fD  112 (171)
T d1ws6a1          38 RYPRRGRFLDPF--AGSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE-VFLPE-AKAQGERFT  112 (171)
T ss_dssp             HCTTCCEEEEET--CSSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH-HHHHH-HHHTTCCEE
T ss_pred             cccCCCeEEEec--cccchhhhhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh-ccccc-ccccCCccc
Confidence            467788887554  33344444433 469999999999888776653   45553 44433331 22222 222334799


Q ss_pred             EEEEC----CC-hhhHHHHH--HhhccCCEEEEE
Q 037444          224 IYFEN----VG-GKMLDAVL--LNMRLRGRIAVC  250 (339)
Q Consensus       224 ~vid~----~g-~~~~~~~~--~~l~~~G~~v~~  250 (339)
                      +||--    .+ ...+...+  .+|+++|.++.-
T Consensus       113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             eeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            99741    22 12333333  357888877643

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.14  E-value=0.2  Score=34.65  Aligned_cols=46  Identities=20%  Similarity=0.149  Sum_probs=36.3

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          137 VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       137 ~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++..+| +..  +..++++|+|+ |.+|+-.++.++.+|.+|.++.+++
T Consensus        10 ~~s~~~l-~l~--~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          10 VDSTGAL-DFQ--NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             EEHHHHT-SCS--SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EchhHhh-Ccc--cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3556565 322  34488999997 9999999999999999999999763

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.12  E-value=0.1  Score=42.24  Aligned_cols=33  Identities=24%  Similarity=0.168  Sum_probs=29.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      |.+|+|+|| |..|+.++..++..|.+|.++..+
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            468999997 999999999999999999999854

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.11  E-value=1.4  Score=32.49  Aligned_cols=81  Identities=15%  Similarity=0.065  Sum_probs=52.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHHHhCC--C-------eeeeCCChhhHHHHHHHhCCCCc
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE--KVDLLKNKFGF--D-------DAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~--~~~~~~~~~g~--~-------~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      +|.|.|+ |..|.+.+..+...|-+|+...+..+  ..+.+. +-+.  .       ..+.. .. ++.+.+     ...
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~-~~-~~~~~~-----~~a   72 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFW-PE-QLEKCL-----ENA   72 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEEC-GG-GHHHHH-----TTC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccc-cc-cHHHHH-----hcc
Confidence            6899996 99999988888888889999887433  233333 1111  0       00111 11 433333     258


Q ss_pred             cEEEECCChhhHHHHHHhhcc
Q 037444          223 DIYFENVGGKMLDAVLLNMRL  243 (339)
Q Consensus       223 d~vid~~g~~~~~~~~~~l~~  243 (339)
                      |+|+-++....+...++.+.+
T Consensus        73 d~Ii~avps~~~~~~~~~l~~   93 (180)
T d1txga2          73 EVVLLGVSTDGVLPVMSRILP   93 (180)
T ss_dssp             SEEEECSCGGGHHHHHHHHTT
T ss_pred             chhhcccchhhhHHHHHhhcc
Confidence            999999998877777766555

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.07  E-value=0.22  Score=34.61  Aligned_cols=38  Identities=16%  Similarity=0.182  Sum_probs=33.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++++.+++|.|| |.+|.-++..++.+|.+|..+.+++
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            3677899999997 9999999999999999999999764

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=3.6  Score=33.91  Aligned_cols=106  Identities=19%  Similarity=0.178  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCeeeeC-C-------Ch------
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDDAFNY-K-------EE------  207 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~v~~~-~-------~~------  207 (339)
                      +.+.++++..|+ ...+|..|.+++..|+.+|.+.+++..   ++++.+.++ .+|++-+... .       ..      
T Consensus        90 ~~g~~~~~~~vv-~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~vv~v~~~~~~~~~~~~~~~~~~  167 (355)
T d1jbqa_          90 RDGTLKPGDTII-EPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEIVRTPTNARFDSPESHVGVAWR  167 (355)
T ss_dssp             HHTCSCTTCEEE-EECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEEEECCC-------CCHHHHHHH
T ss_pred             HcCCcccCceEE-EecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeEEEecccccchhhhhhhhHHHH
Confidence            445667766555 455799999999999999997776653   456788888 8998532210 0       00      


Q ss_pred             -----------------hh-------HHHHHHHhCCCCccEEEECCChh-hH---HHHHHhhccCCEEEEEec
Q 037444          208 -----------------PD-------LDAALKRCFPQGIDIYFENVGGK-ML---DAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       208 -----------------~~-------~~~~v~~~~~g~~d~vid~~g~~-~~---~~~~~~l~~~G~~v~~g~  252 (339)
                                       .+       ...++.+-+++.+|.++.++|+. .+   -..++...+.-+++.+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep  240 (355)
T d1jbqa_         168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  240 (355)
T ss_dssp             HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence                             00       11222222344789999999953 33   344555566778776654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=90.88  E-value=0.33  Score=38.24  Aligned_cols=35  Identities=20%  Similarity=0.341  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      -.|.+|+|.| .|.+|..+++++...|++|++++.+
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            4789999999 5999999999999999999988844

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.70  E-value=0.18  Score=34.73  Aligned_cols=34  Identities=24%  Similarity=0.085  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++++|.|+ |.+|+-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            468999997 9999999999999999999998764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.57  E-value=0.22  Score=34.65  Aligned_cols=34  Identities=15%  Similarity=0.122  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ..+++|+|| |.+|+-+++++..+|.+|.++.+++
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            468999997 9999999999999999999998753

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.57  E-value=0.16  Score=39.34  Aligned_cols=97  Identities=12%  Similarity=0.068  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---C--eeeeCCChhhHHHHHHHhCCCCc
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF---D--DAFNYKEEPDLDAALKRCFPQGI  222 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~---~--~v~~~~~~~~~~~~v~~~~~g~~  222 (339)
                      ...++.+||=.|  .|.|..+..+++..+.+|+++..+++-.+.+++.+..   .  ..+..+-. ++     ....+.+
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~-~~-----~~~~~~f  128 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DF-----TPEPDSY  128 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GC-----CCCSSCE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccc-cc-----ccccccc
Confidence            346778899888  5788888888777777999999999988888743321   1  12222211 11     0112379


Q ss_pred             cEEEECC-----Ch----hhHHHHHHhhccCCEEEEEec
Q 037444          223 DIYFENV-----GG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       223 d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+|+...     ..    ..+..+.+.|+++|.++....
T Consensus       129 D~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         129 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence            9998733     22    256778899999999987654

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.43  E-value=0.15  Score=39.84  Aligned_cols=36  Identities=19%  Similarity=0.219  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ..+.+|+|+|| |..|+.++..++..|.+|+++..++
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            46789999997 9999999999999999999998654

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.42  E-value=1.9  Score=29.79  Aligned_cols=39  Identities=23%  Similarity=0.204  Sum_probs=34.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      -+.++.+|+|.|-+|.-|....+.++..|-+|++-+...
T Consensus        11 li~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPg   49 (130)
T d1euca1          11 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPG   49 (130)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT
T ss_pred             EEcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccC
Confidence            356788999999999999999999999999998887553

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.32  E-value=0.32  Score=39.20  Aligned_cols=96  Identities=15%  Similarity=0.143  Sum_probs=65.1

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHh---CCC-eeeeCCChhhHHHHHHHhCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA--GCYVVGSAGSKEKVDLLKNKF---GFD-DAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~--ga~V~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      .++.++.+||=.|  .+.|..+..+++..  +++|+++..+++-.+.+++..   +.. .....+-. ++      -..+
T Consensus        23 ~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~-~~------~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EI------ELND   93 (281)
T ss_dssp             SCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTT-TC------CCSS
T ss_pred             hccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccc-cc------cccC
Confidence            3567888998887  35788888998875  579999999998877776332   222 11211111 11      0123


Q ss_pred             CccEEEECCC-----h--hhHHHHHHhhccCCEEEEEe
Q 037444          221 GIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       221 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+|+|+....     .  ..++++.+.|+++|.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            7999987543     2  26888999999999988764

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=1  Score=36.13  Aligned_cols=95  Identities=13%  Similarity=0.106  Sum_probs=61.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC---C--eeeeCCChhhHHHHHHHhCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF----GF---D--DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~----g~---~--~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ...++|||.|  |+-|..+-.+++..+. +|.++.-.++=.+.+++-+    +.   .  +++..    |..+.+++ +.
T Consensus        77 ~~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~----Da~~~l~~-~~  149 (285)
T d2o07a1          77 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG----DGFEFMKQ-NQ  149 (285)
T ss_dssp             SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHHHT-CS
T ss_pred             cCcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc----cHHHHHhc-CC
Confidence            4557899999  4556667777777655 8999998888777777322    11   1  22222    44455554 33


Q ss_pred             CCccEEEE-CCC----------hhhHHHHHHhhccCCEEEEEe
Q 037444          220 QGIDIYFE-NVG----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 g~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +++|+||- ...          .+.++.+-++|+++|.++.-.
T Consensus       150 ~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         150 DAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             SCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            48999874 221          124778889999999988654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.29  E-value=1.1  Score=34.45  Aligned_cols=90  Identities=11%  Similarity=0.193  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHH-HHHHHHHHc-CCEEEEEe-CCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCC-CccEEEE
Q 037444          154 YVYVSAASGAVGQ-LVGQFAKLA-GCYVVGSA-GSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQ-GIDIYFE  227 (339)
Q Consensus       154 ~vlI~ga~g~~G~-~ai~la~~~-ga~V~~~~-~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g-~~d~vid  227 (339)
                      +|.|+|. |.+|. ..+...+.. +.++++++ +++++.+.+.+++|..  .+..+++       +.++... .+|+|+-
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d-------~~ell~~~~iD~V~I  106 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN-------FDKIAKDPKIDAVYI  106 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS-------GGGGGGCTTCCEEEE
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc-------hhhhcccccceeeee
Confidence            7899995 88886 344444443 67888665 4667766666577764  2333332       2233333 7999998


Q ss_pred             CCChh-hHHHHHHhhccCCEEEEEec
Q 037444          228 NVGGK-MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       228 ~~g~~-~~~~~~~~l~~~G~~v~~g~  252 (339)
                      |+... +...+.++|..+ +-+.+.-
T Consensus       107 ~tp~~~H~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             CSCGGGHHHHHHHHHHTT-CEEEECS
T ss_pred             ccchhhhhhHHHHhhhcc-hhhhcCC
Confidence            88864 777888888765 4455543

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.21  E-value=1.1  Score=34.10  Aligned_cols=104  Identities=13%  Similarity=0.099  Sum_probs=65.4

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCee--eeCCChhhH
Q 037444          137 VTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDDA--FNYKEEPDL  210 (339)
Q Consensus       137 ~tA~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~v--~~~~~~~~~  210 (339)
                      -.-|..++..    .+..||=+|  .|.|..++.+|+.. +.+++++..+......+.+   +.|.+.+  +..+.. ++
T Consensus        19 ~~~w~~~F~~----~~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~-~l   91 (204)
T d2fcaa1          19 KGKWNTVFGN----DNPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDAD-TL   91 (204)
T ss_dssp             TTCHHHHHTS----CCCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGG-GH
T ss_pred             HhHHHHHcCC----CCceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchh-hh
Confidence            3346665432    233445555  78899999999976 7799999998886655432   4566533  322221 22


Q ss_pred             HHHHHHhCCCCccEEEECCCh---------------hhHHHHHHhhccCCEEEEE
Q 037444          211 DAALKRCFPQGIDIYFENVGG---------------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       211 ~~~v~~~~~g~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~~  250 (339)
                         ...+.++.+|.|+-....               ..+....+.|+++|.+...
T Consensus        92 ---~~~~~~~~~d~v~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1          92 ---TDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             ---HHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             ---hcccCchhhhccccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence               233334478877754322               3577888999999998765

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.20  E-value=0.66  Score=37.20  Aligned_cols=94  Identities=14%  Similarity=0.048  Sum_probs=59.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC------------C---eeeeCCChhhHHHHH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF------------D---DAFNYKEEPDLDAAL  214 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~------------~---~v~~~~~~~~~~~~v  214 (339)
                      ....+|||.|+  |.|..+-.+++.-..+|.++.-+++=.+.+++-++.            +   +++..    |..+.+
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~----Da~~~l  144 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG----DGFEFI  144 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES----CHHHHH
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC----hHHHHH
Confidence            45579999995  444445555665445899999888877777732321            1   22322    444455


Q ss_pred             HHhCCCCccEEEE-CCC----------hhhHHHHHHhhccCCEEEEEe
Q 037444          215 KRCFPQGIDIYFE-NVG----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       215 ~~~~~g~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      ++  .+++|+||- +..          .+.++.+.++|+++|.++.-+
T Consensus       145 ~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         145 KN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             HH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            53  348999874 222          124778999999999988643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.13  E-value=1.4  Score=28.42  Aligned_cols=66  Identities=15%  Similarity=0.164  Sum_probs=45.4

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          153 EYVYVSAASGAVGQLV-GQFAKLAGCYVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~a-i~la~~~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+|-++|. |++|..+ +++++..|++|.+.+..+. ..+.++ +.|+.-...++.. ++         .+.|+|+-+.+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence            46888886 8888754 6889999999999987763 356666 8897533333332 21         24788776555

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=90.13  E-value=0.15  Score=38.34  Aligned_cols=91  Identities=12%  Similarity=0.051  Sum_probs=54.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|.|.||+|-+|+-.++++..+ ..++..++++...-..+.+   .+..........       .......+.|++|.|.
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVA-------VKDADFSNVDAVFCCL   79 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBC-------GGGCCGGGCSEEEECC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchh-------hhhhhhcccceeeecc
Confidence            6899999999999999999876 4577666543322111210   111100000000       0000012689999999


Q ss_pred             ChhhHHHHHHhhccCCEEEEEe
Q 037444          230 GGKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      +..........+...+..+...
T Consensus        80 p~~~s~~~~~~l~~~~~~v~~~  101 (183)
T d2cvoa1          80 PHGTTQEIIKGLPQELKIVDLS  101 (183)
T ss_dssp             SSSHHHHHHHTSCSSCEEEECS
T ss_pred             ccchHHHHHHHHHhcCcccccc
Confidence            9876666667888888877653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.09  E-value=0.29  Score=35.26  Aligned_cols=87  Identities=21%  Similarity=0.155  Sum_probs=48.5

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHc---CCEEEEEeCCHHHHHHHHHHhCCC--eeeeCCChhhHHHHHHHhCCCCccEEEE
Q 037444          154 YVYVSAASGAVGQLVGQF-AKLA---GCYVVGSAGSKEKVDLLKNKFGFD--DAFNYKEEPDLDAALKRCFPQGIDIYFE  227 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~l-a~~~---ga~V~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~v~~~~~g~~d~vid  227 (339)
                      +|.|.||+|-+|+-.+++ +.+.   -.+++...++........  ++..  .+.+-.+   .. .+     .++|++|-
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~--~~~~~~~~~~~~~---~~-~~-----~~~DivF~   71 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS--FGGTTGTLQDAFD---LE-AL-----KALDIIVT   71 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG--GGTCCCBCEETTC---HH-HH-----HTCSEEEE
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc--ccCCceeeecccc---hh-hh-----hcCcEEEE
Confidence            689999999999999974 4432   247776665533211111  1111  1111111   11 11     25999999


Q ss_pred             CCChhhHHHHHHhhccCC---EEEEEe
Q 037444          228 NVGGKMLDAVLLNMRLRG---RIAVCG  251 (339)
Q Consensus       228 ~~g~~~~~~~~~~l~~~G---~~v~~g  251 (339)
                      |.+.+........+...|   .+++.+
T Consensus        72 a~~~~~s~~~~~~~~~~g~~~~VID~S   98 (146)
T d1t4ba1          72 CQGGDYTNEIYPKLRESGWQGYWIDAA   98 (146)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred             ecCchHHHHhhHHHHhcCCCeecccCC
Confidence            999875555555554444   355544

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=89.89  E-value=0.49  Score=38.72  Aligned_cols=94  Identities=19%  Similarity=0.156  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHh-----CC--C---eeeeCCChhhHHHHHHHhC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAG-CYVVGSAGSKEKVDLLKNKF-----GF--D---DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~g-a~V~~~~~~~~~~~~~~~~~-----g~--~---~v~~~~~~~~~~~~v~~~~  218 (339)
                      ...++|||+|+  |.|..+-.+++... .+|.++.-.++=.+.+++-+     ++  +   +++..    |..+.+++ +
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~----Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID----DARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES----CHHHHHHH-C
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEc----hHHHHhhh-c
Confidence            34578999995  55666777777764 49999999988777777333     11  1   22222    44555554 3


Q ss_pred             CCCccEEEE-C---CCh----------hhHHHHHHhhccCCEEEEE
Q 037444          219 PQGIDIYFE-N---VGG----------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       219 ~g~~d~vid-~---~g~----------~~~~~~~~~l~~~G~~v~~  250 (339)
                      ++++|+||- .   .+.          +.++.+.++|+++|.++.-
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~  194 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence            448999973 3   221          1467888999999998754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.33  Score=39.75  Aligned_cols=97  Identities=18%  Similarity=0.108  Sum_probs=55.6

Q ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHH---HHHHHhCCC---eeeeCCChhhHHHHH
Q 037444          142 GLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVD---LLKNKFGFD---DAFNYKEEPDLDAAL  214 (339)
Q Consensus       142 ~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~---~~~~~~g~~---~v~~~~~~~~~~~~v  214 (339)
                      |+.+...+.+|.+||-+|.  |.|..++.+|+ .|+ +|+++..++.-..   ..+ ..+..   .++..+.. ++.   
T Consensus        26 ai~~~~~~~~~~~VLDiGc--G~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~-~~~~~~~i~~~~~~~~-~l~---   97 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC--GTGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIR-LNKLEDTITLIKGKIE-EVH---   97 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHH-HTTCTTTEEEEESCTT-TSC---
T ss_pred             HHHhccccCCcCEEEEECC--CCCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHH-HhCCCccceEEEeeHH-Hhc---
Confidence            4545556678999999985  36666666665 577 8999998875322   222 33432   23333222 210   


Q ss_pred             HHhCCCCccEEEECC-C----hh----hHHH-HHHhhccCCEEE
Q 037444          215 KRCFPQGIDIYFENV-G----GK----MLDA-VLLNMRLRGRIA  248 (339)
Q Consensus       215 ~~~~~g~~d~vid~~-g----~~----~~~~-~~~~l~~~G~~v  248 (339)
                        .....+|+|+.-. +    .+    .+.. .-+.|+++|+++
T Consensus        98 --~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 --LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             --CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             --CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence              1123899998621 1    11    2222 335799999876

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.84  E-value=0.18  Score=41.78  Aligned_cols=33  Identities=21%  Similarity=0.317  Sum_probs=29.7

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          154 YV-YVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       154 ~v-lI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +| ||+||+|-+|..++..+...|.+|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            57 9999999999999998888999999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.66  E-value=0.31  Score=34.41  Aligned_cols=38  Identities=18%  Similarity=0.030  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++.+.+++|.|| |.+|+-++..++.+|.+|.++.+++
T Consensus        31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            4667899999997 9999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.65  E-value=0.24  Score=34.55  Aligned_cols=33  Identities=9%  Similarity=-0.008  Sum_probs=30.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .+++|.|+ |.+|+-++..++.+|.+|+++.+++
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            68999997 9999999999999999999999763

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.61  E-value=0.54  Score=37.61  Aligned_cols=102  Identities=13%  Similarity=0.064  Sum_probs=59.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-----C--CEEEEEeCCHHHHHHHHHHhCC----C-eeeeCCCh--hhHHHHH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLA-----G--CYVVGSAGSKEKVDLLKNKFGF----D-DAFNYKEE--PDLDAAL  214 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~-----g--a~V~~~~~~~~~~~~~~~~~g~----~-~v~~~~~~--~~~~~~v  214 (339)
                      .++.-+||=+|  .|.|..+..+++.+     +  .+++++..++.-.+.+++.+.-    . ..++....  +++....
T Consensus        38 ~~~~~~VLDiG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          38 TKSEIKILSIG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TCSEEEEEEET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             CCCCCeEEEEc--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            34445788887  45565555555432     2  3688999998888877744321    1 12222221  0222222


Q ss_pred             HHhC-CCCccEEEECCC-----h--hhHHHHHHhhccCCEEEEEec
Q 037444          215 KRCF-PQGIDIYFENVG-----G--KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       215 ~~~~-~g~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      .... ++.||+|+..-.     .  ..+..+.++|+++|.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            2222 338999987443     1  278899999999998876643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.57  E-value=0.2  Score=34.93  Aligned_cols=36  Identities=19%  Similarity=0.108  Sum_probs=31.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +..++++|+|+ |-+|+-.++..+.+|.+|.++.+++
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            34579999997 9999999999999999999998764

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=89.45  E-value=0.51  Score=37.84  Aligned_cols=95  Identities=14%  Similarity=0.099  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh----CC--C---eeeeCCChhhHHHHHHHhCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF----GF--D---DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~----g~--~---~v~~~~~~~~~~~~v~~~~~  219 (339)
                      ...++|||+|  ||-|..+-.+++..+. +|.++.-.++=.+.+++-+    ++  +   .++..    |..+.+++ ++
T Consensus        74 ~~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~  146 (274)
T d1iy9a_          74 PNPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE  146 (274)
T ss_dssp             SSCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred             CCcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence            4557999998  4566677777787765 8999999888777776322    22  1   23332    33444544 33


Q ss_pred             CCccEEEECC-C----------hhhHHHHHHhhccCCEEEEEe
Q 037444          220 QGIDIYFENV-G----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       220 g~~d~vid~~-g----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .++|+|+--. .          .+.++.+.++|+++|.++.-.
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            4899997422 1          125788999999999988653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.40  E-value=0.38  Score=38.15  Aligned_cols=34  Identities=21%  Similarity=0.132  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      -.|.+|+|.| .|.+|..+++.+...|++|++++.
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            4788999999 599999999999999999998874

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.20  E-value=0.28  Score=33.56  Aligned_cols=34  Identities=18%  Similarity=0.179  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .++++|.|| |.+|.-+++.++.+|.+|.++.+.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            378999997 9999999999999999999998653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.14  E-value=0.29  Score=34.17  Aligned_cols=36  Identities=11%  Similarity=0.086  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      +..++++|.|+ |.+|+-++++.+.+|.+|.++.+++
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            34589999997 9999999999999999999998753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.94  E-value=0.31  Score=36.52  Aligned_cols=83  Identities=23%  Similarity=0.187  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|..++++++.+|++|++..++..+        +.....  .   ++.+.++     ..|+|+.++.
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~--~---~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT--N---SLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB--S---CSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee--e---chhhhhh-----ccchhhcccc
Confidence            5789999996 999999999999999999999876431        111111  1   2323232     4789988776


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      - +     .-...++.++++..+|.++.
T Consensus       102 l~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cccccccccccceeeeccccceEEeccc
Confidence            2 2     12578889999999998864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.88  E-value=0.27  Score=37.50  Aligned_cols=85  Identities=22%  Similarity=0.234  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .|.+|.|+|. |.+|..++++++.+|++|++..+...+        +....+...   ++.+.+.+     .|++.-++.
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK--------GDHPDFDYV---SLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS--------SCCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccch--------hhhcchhHH---HHHHHHHh-----cccceeeec
Confidence            4689999995 999999999999999999999875332        111112221   33333333     688877765


Q ss_pred             h-h-----hHHHHHHhhccCCEEEEEec
Q 037444          231 G-K-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 ~-~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                      . +     .-...++.|+++..+|.++.
T Consensus       107 lt~~T~~li~~~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred             ccccccccccHHHhhccCCceEEEeccc
Confidence            2 2     12467788888888888765

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=88.47  E-value=0.71  Score=36.24  Aligned_cols=94  Identities=9%  Similarity=0.054  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH---hCCC-ee--eeCCChhhHHHHHHHh-CCCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK---FGFD-DA--FNYKEEPDLDAALKRC-FPQG  221 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~v~~~-~~g~  221 (339)
                      +.++.+||=.|.  |.|..+..+++.-..+|++++.|++..+.+++.   .+.. .+  +..+..    .  ... ..+.
T Consensus        22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~----~--~~~~~~~~   93 (252)
T d1ri5a_          22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSY----G--RHMDLGKE   93 (252)
T ss_dssp             CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTT----T--SCCCCSSC
T ss_pred             CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchh----h--hccccccc
Confidence            678999999984  446667788776556899999999988888643   2322 11  111110    0  001 1237


Q ss_pred             ccEEEECCCh-----------hhHHHHHHhhccCCEEEEE
Q 037444          222 IDIYFENVGG-----------KMLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       222 ~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  250 (339)
                      +|+|+....-           ..+..+.+.|+++|.++..
T Consensus        94 fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          94 FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            9999874432           1455677899999998754

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.41  E-value=0.29  Score=39.56  Aligned_cols=33  Identities=18%  Similarity=0.153  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      .|.+|+|.| .|.+|..+++.+...|++|++++.
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            678999999 599999999999999999999873

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.41  E-value=0.15  Score=41.09  Aligned_cols=32  Identities=31%  Similarity=0.293  Sum_probs=29.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .|+|.|| |.+|++++..++..|.+|.++.+++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            5999997 9999999999999999999998765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.36  E-value=2  Score=29.59  Aligned_cols=91  Identities=11%  Similarity=-0.028  Sum_probs=60.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh-
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK-  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~-  232 (339)
                      .++|.|. |.+|..+++.++  |.+|+++..++++.+.++ ..|.. ++..+.  .-.+.+++..-..++.++-+...+ 
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGAN-FVHGDP--TRVSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCcc-cccccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence            4788886 999998877664  556788888888888777 67764 444443  223455554334789999888865 


Q ss_pred             ---hHHHHHHhhccCCEEEEEe
Q 037444          233 ---MLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       233 ---~~~~~~~~l~~~G~~v~~g  251 (339)
                         ..-...+.+.+..+++...
T Consensus        75 ~n~~~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          75 ETIHCILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHCSSSCEEEEC
T ss_pred             hhHHHHHHHHHHCCCceEEEEE
Confidence               2334455666776666543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.31  E-value=1.4  Score=28.86  Aligned_cols=71  Identities=13%  Similarity=0.162  Sum_probs=48.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCHH-HHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEE
Q 037444          148 SPKKGEYVYVSAASGAVGQLV-GQFAKLAGCYVVGSAGSKE-KVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIY  225 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~a-i~la~~~ga~V~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~v  225 (339)
                      .++...++.+.|. |++|..+ +++++..|.+|.+.+.... ..+.++ +.|.. +...... +   .+     .+.|+|
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~-v~~g~~~-~---~i-----~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAK-IYIGHAE-E---HI-----EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCE-EEESCCG-G---GG-----TTCSEE
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCe-EEECCcc-c---cC-----CCCCEE
Confidence            3566789999996 8888766 8999999999999987533 345666 67875 3333332 1   11     246777


Q ss_pred             EECCC
Q 037444          226 FENVG  230 (339)
Q Consensus       226 id~~g  230 (339)
                      +=+.+
T Consensus        72 V~S~A   76 (96)
T d1p3da1          72 VVSSA   76 (96)
T ss_dssp             EECTT
T ss_pred             EECCC
Confidence            76555

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.25  E-value=0.23  Score=41.73  Aligned_cols=30  Identities=13%  Similarity=0.139  Sum_probs=25.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEE-EEEe
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYV-VGSA  183 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V-~~~~  183 (339)
                      +|||+||+|-+|..++..+...|.+| +++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            79999999999999998888888864 4444

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.23  E-value=5.4  Score=32.18  Aligned_cols=107  Identities=17%  Similarity=0.150  Sum_probs=68.1

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHHhCCCeeeeC-----------------
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA---GSKEKVDLLKNKFGFDDAFNY-----------------  204 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~---~~~~~~~~~~~~~g~~~v~~~-----------------  204 (339)
                      +.+.++.+...+|...+|..|.++...|+.+|.+.+++.   .++.+.+.++ .+|++-++..                 
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHH
Confidence            446667777777777789999999999999999766664   3356677777 8888532211                 


Q ss_pred             -----------CChh-------hHHHHHHHhCCCCccEEEECCChh-hHH---HHHHhhccCCEEEEEec
Q 037444          205 -----------KEEP-------DLDAALKRCFPQGIDIYFENVGGK-MLD---AVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       205 -----------~~~~-------~~~~~v~~~~~g~~d~vid~~g~~-~~~---~~~~~l~~~G~~v~~g~  252 (339)
                                 .+..       ....++.+...+.+|.++-++|+. .+.   ..++...+.-+++.+..
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~  205 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  205 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence                       1100       012233333445789999999864 433   44455556777766543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.18  E-value=0.49  Score=33.83  Aligned_cols=36  Identities=22%  Similarity=0.115  Sum_probs=29.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCHHH
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGC--YVVGSAGSKEK  188 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga--~V~~~~~~~~~  188 (339)
                      .+|.|.||+|.+|..++.++...|.  ++..+..++.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~   38 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP   38 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence            3789999889999999999988876  67777766554

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=87.94  E-value=4.6  Score=31.00  Aligned_cols=94  Identities=11%  Similarity=-0.019  Sum_probs=56.7

Q ss_pred             CEEEEEcCCch---HHHHHHHHHHHc--CCEEEEEe-CCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEE
Q 037444          153 EYVYVSAASGA---VGQLVGQFAKLA--GCYVVGSA-GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYF  226 (339)
Q Consensus       153 ~~vlI~ga~g~---~G~~ai~la~~~--ga~V~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vi  226 (339)
                      =+|.|+|.++.   ++...+...+..  ++++++++ ++.++.+.+.++++....-.++   ++.+.+.   +..+|+|+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~---~~~iD~V~   90 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD---SLESFAQ---YKDIDMIV   90 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES---CHHHHHH---CTTCSEEE
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec---chhhccc---ccccceee
Confidence            47899996332   333334444443  56888765 4455555555478765443343   3333322   23799999


Q ss_pred             ECCChh-hHHHHHHhhccC-----CEEEEEec
Q 037444          227 ENVGGK-MLDAVLLNMRLR-----GRIAVCGM  252 (339)
Q Consensus       227 d~~g~~-~~~~~~~~l~~~-----G~~v~~g~  252 (339)
                      .|+... +.+.+..+|..+     ++-|.+.-
T Consensus        91 i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EK  122 (237)
T d2nvwa1          91 VSVKVPEHYEVVKNILEHSSQNLNLRYLYVEW  122 (237)
T ss_dssp             ECSCHHHHHHHHHHHHHHSSSCSSCCEEEEES
T ss_pred             ccCCCcchhhHHHHHHHhcccccCCceEEEec
Confidence            999864 777778888765     45566654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.89  Score=35.59  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=26.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSA  183 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~  183 (339)
                      +.+|+|.|+ |++|..+++.+.+.|. +++.++
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEEC
Confidence            468999996 9999999999999999 666665

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=87.54  E-value=1.1  Score=35.24  Aligned_cols=100  Identities=15%  Similarity=0.133  Sum_probs=62.7

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCeeeeCCChhhHHHHHHHhCCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDDAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      +...+....+||=+|  ++.|..+..+++.. +++++++.. ++-.+.+++   +.|....+..... ++.    .-.+.
T Consensus        75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~----~~~p~  146 (256)
T d1qzza2          75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFF----KPLPV  146 (256)
T ss_dssp             HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSC
T ss_pred             hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-ecc----ccccc
Confidence            445567778888888  68889999999987 779999985 444444432   3343211111111 111    11123


Q ss_pred             CccEEEECC-----Ch----hhHHHHHHhhccCCEEEEEec
Q 037444          221 GIDIYFENV-----GG----KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       221 ~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      ++|+++-..     ..    ..++++.+.|+++|+++.+..
T Consensus       147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            689887532     21    147788999999999998764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=87.51  E-value=0.88  Score=33.38  Aligned_cols=98  Identities=16%  Similarity=0.191  Sum_probs=59.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHh----CC-Ce---------eeeCCChhhH--HHHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKF----GF-DD---------AFNYKEEPDL--DAAL  214 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~----g~-~~---------v~~~~~~~~~--~~~v  214 (339)
                      +|.|.| -|-+|+++.+.+...+.+|.++-.   +.+....+. ++    |. ..         +++...- .+  ....
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I-~~~~~~~p   78 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKI-TVFNEMKP   78 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEE-EEECCSSG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEE-EEEecCCh
Confidence            588998 699999999988777888877753   234555554 32    11 00         1110000 00  0001


Q ss_pred             HHhCC-C-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc
Q 037444          215 KRCFP-Q-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       215 ~~~~~-g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      .++.- . ++|+||||+|. ...+.+..+|..+-+-|.+..+.
T Consensus        79 ~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~  121 (169)
T d1dssg1          79 ENIPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPS  121 (169)
T ss_dssp             GGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCC
T ss_pred             HHCCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCc
Confidence            11111 2 79999999996 57788889999887777776543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=87.41  E-value=0.48  Score=36.95  Aligned_cols=34  Identities=21%  Similarity=0.120  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .-.+|+|+|| |..|++++..+...|.+|.++.+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            4458999997 999999999889999999999864

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.37  E-value=0.3  Score=38.79  Aligned_cols=32  Identities=22%  Similarity=0.133  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK  186 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~  186 (339)
                      .|+|+|| |..|++++.+++..|. +|.++.+++
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            6999997 9999999999999997 888887653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.34  E-value=1  Score=31.33  Aligned_cols=60  Identities=15%  Similarity=0.190  Sum_probs=47.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                      +..++..-+.+++.-..-..-..++++++.+|. ++++.+.+++..+.++ ++|++.+++..
T Consensus        59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~  119 (132)
T d1lssa_          59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE  119 (132)
T ss_dssp             HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred             hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence            557787777777655445566778889999988 7888898888888888 99999988653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.03  E-value=0.81  Score=36.53  Aligned_cols=72  Identities=14%  Similarity=0.143  Sum_probs=42.5

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEe--CCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCC-CccEEEECCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGC-YVVGSA--GSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQ-GIDIYFENVG  230 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga-~V~~~~--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g-~~d~vid~~g  230 (339)
                      |||+||+|-+|..++..+...|. +|+++.  .+..+..... +.......+.  . +..+.+.....- .+++++.+.+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDK--E-DFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEH--H-HHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccc--h-HHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999888888897 688874  2222223333 3332222221  1 333444333333 6788887653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.02  E-value=0.36  Score=39.34  Aligned_cols=36  Identities=22%  Similarity=0.135  Sum_probs=30.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .....+|+|+|| |..|+.++..+...|.+|.++..+
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~   62 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEAS   62 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345569999997 999999998888889999999865

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.00  E-value=0.44  Score=32.93  Aligned_cols=37  Identities=14%  Similarity=0.015  Sum_probs=31.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          149 PKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       149 ~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ++.+.+++|.|| |.+|+-+++.++.+|.+|..+.+++
T Consensus        29 ~~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          29 IENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hhcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            345578999997 9999999999999999999998653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.92  E-value=0.83  Score=37.53  Aligned_cols=94  Identities=23%  Similarity=0.124  Sum_probs=52.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH---HhCCC---eeeeCCChhhHHHHHHHh
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKN---KFGFD---DAFNYKEEPDLDAALKRC  217 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~v~~~  217 (339)
                      +...+.+|.+||-+|.  |.|..++.+|+ .|+ +|+++..++ ....+++   ..+..   .++..+.. ++     ..
T Consensus        32 ~~~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~  101 (328)
T d1g6q1_          32 QNKDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HL  101 (328)
T ss_dssp             HHHHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CC
T ss_pred             hccccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cC
Confidence            3344568899999984  35666654444 677 899999775 2333321   34442   23333222 21     11


Q ss_pred             CCCCccEEEECCC-----h-h----hHHHHHHhhccCCEEE
Q 037444          218 FPQGIDIYFENVG-----G-K----MLDAVLLNMRLRGRIA  248 (339)
Q Consensus       218 ~~g~~d~vid~~g-----~-~----~~~~~~~~l~~~G~~v  248 (339)
                      ....+|+|+...-     . .    .+...-++|+++|+++
T Consensus       102 ~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         102 PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cccceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            2237999986321     1 1    2333447899999875

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=86.92  E-value=2.5  Score=30.80  Aligned_cols=98  Identities=14%  Similarity=0.107  Sum_probs=57.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC--HHHHHHHHHHhCC-----CeeeeCCCh--------hh--HHHHHHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS--KEKVDLLKNKFGF-----DDAFNYKEE--------PD--LDAALKR  216 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~--~~~~~~~~~~~g~-----~~v~~~~~~--------~~--~~~~v~~  216 (339)
                      +|.|.| -|-+|+.+.+++...+.+|.++-..  .+....+. ++..     ...+...+.        ..  ......+
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~   79 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE   79 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence            688998 6999999999887778888877533  23344443 2211     000100000        00  0001122


Q ss_pred             hCCC--CccEEEECCCh-hhHHHHHHhhccCCEEEEEecc
Q 037444          217 CFPQ--GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       217 ~~~g--~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      +...  ++|+|+||+|. ...+.+..++..+-+-|.+..+
T Consensus        80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             CcccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            2222  79999999996 5777888899887666666543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=86.91  E-value=0.38  Score=35.22  Aligned_cols=35  Identities=26%  Similarity=0.269  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSK  186 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~  186 (339)
                      .|.+|+|+|| |.+|+.++..++.++  .+|+++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4789999997 999999988888777  4888887554

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.74  E-value=1.2  Score=37.27  Aligned_cols=91  Identities=21%  Similarity=0.191  Sum_probs=62.6

Q ss_pred             EEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CCCe----------------eeeCCChhhHHHHHHH
Q 037444          157 VSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF---GFDD----------------AFNYKEEPDLDAALKR  216 (339)
Q Consensus       157 I~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~---g~~~----------------v~~~~~~~~~~~~v~~  216 (339)
                      |..+-++.|.-.+.+|+..|+ +|++.+-+++..+.+++.+   +...                .++..   |....+.+
T Consensus        49 vLD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~---Da~~~~~~  125 (375)
T d2dula1          49 VLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD---DANRLMAE  125 (375)
T ss_dssp             EEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES---CHHHHHHH
T ss_pred             EEEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh---hhhhhhHh
Confidence            455568889999999998888 8999999999888887432   2111                11111   33333322


Q ss_pred             hCCCCccEE-EECCCh--hhHHHHHHhhccCCEEEEEe
Q 037444          217 CFPQGIDIY-FENVGG--KMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       217 ~~~g~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g  251 (339)
                       ....||+| +|..|+  +.+..++++++.+|-+....
T Consensus       126 -~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         126 -RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             -STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence             22379955 888886  48899999999998876553

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.65  E-value=4.1  Score=30.29  Aligned_cols=105  Identities=18%  Similarity=0.249  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHh---CCC-eeeeCCChhhHHHHHHHhCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKF---GFD-DAFNYKEEPDLDAALKRCFP  219 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~v~~~~~  219 (339)
                      +....++|+.+ |-.+ .|.|-.+-.+++.. +.+|+++..+++..+.+++.+   +.. ..+..+-. ++...+.....
T Consensus        17 ~~l~~~~~~~~-lD~t-~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~   93 (192)
T d1m6ya2          17 EFLKPEDEKII-LDCT-VGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGI   93 (192)
T ss_dssp             HHHCCCTTCEE-EETT-CTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTC
T ss_pred             HhhCCCCCCEE-EEec-CCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCC
Confidence            44567788744 4443 44454455666654 679999999999888887433   221 23333332 45555555444


Q ss_pred             CCccEEEECCCh----------------hhHHHHHHhhccCCEEEEEec
Q 037444          220 QGIDIYFENVGG----------------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       220 g~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                      +.+|.|+-=.|-                ..+..+.+.|+++|+++.+..
T Consensus        94 ~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f  142 (192)
T d1m6ya2          94 EKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISF  142 (192)
T ss_dssp             SCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEES
T ss_pred             CCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeecc
Confidence            578887432331                145677788899999887654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=86.62  E-value=0.36  Score=34.69  Aligned_cols=90  Identities=21%  Similarity=0.135  Sum_probs=49.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          154 YVYVSAASGAVGQLVGQFAKL----AGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~----~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      +|.|.||+|-+|+-.++++..    -..++...+++...-.. . .++-......... +. +.+     .++|+||-|.
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~~~~~~~~~~~-~~-~~~-----~~~DvvF~al   72 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFGKDAGMLHDAF-DI-ESL-----KQLDAVITCQ   72 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSSSCCCBCEETT-CH-HHH-----TTCSEEEECS
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccCCcceeeeccc-ch-hhh-----ccccEEEEec
Confidence            689999999999999986532    24577766644221111 1 1111111111111 11 111     2589999999


Q ss_pred             ChhhHHHHHHhhccCC---EEEEEec
Q 037444          230 GGKMLDAVLLNMRLRG---RIAVCGM  252 (339)
Q Consensus       230 g~~~~~~~~~~l~~~G---~~v~~g~  252 (339)
                      ++..-.+....+...|   .+|+.+.
T Consensus        73 p~~~s~~~~~~l~~~g~~~~VIDlSs   98 (147)
T d1mb4a1          73 GGSYTEKVYPALRQAGWKGYWIDAAS   98 (147)
T ss_dssp             CHHHHHHHHHHHHHTTCCSEEEESSS
T ss_pred             CchHHHHHhHHHHHcCCceEEEeCCc
Confidence            9876555555555544   3555543

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=86.25  E-value=0.34  Score=35.88  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=27.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      -|+|+|| |+.|+.+...|...|.+|.++.+
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMGE   32 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence            3889997 99999999999999999999874

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.61  E-value=0.48  Score=38.63  Aligned_cols=35  Identities=20%  Similarity=0.126  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      ++..+|+|+|| |-.|+.++..+...|.+|.+...+
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            45567999997 999999999999999999998754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.58  E-value=0.21  Score=37.57  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      ++..|+|+|| |+.|+.++..|.+.|.+|+++.+.
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence            4567999997 999999999999999999998754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.55  E-value=0.96  Score=32.44  Aligned_cols=48  Identities=17%  Similarity=0.101  Sum_probs=38.7

Q ss_pred             hhHHHHHHHhcCCCCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          137 VTAYAGLYEVCSPKKGEYVYVSA-ASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       137 ~tA~~~l~~~~~~~~g~~vlI~g-a~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .|...+| . .+..++..++|.+ +.|-+|+-+++.+..+|.+|..+++.+
T Consensus        26 ~t~~d~l-~-~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          26 LTPEQVM-D-GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             ECHHHHH-H-TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             ECHHHHh-c-CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4677776 3 5677888888872 248899999999999999999999764

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=85.44  E-value=0.33  Score=38.30  Aligned_cols=33  Identities=21%  Similarity=0.119  Sum_probs=28.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKE  187 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~  187 (339)
                      -|+|+|| |+.|++++..|...|.+|.++..++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            3899997 99999998888888999999997653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.35  E-value=7.1  Score=31.21  Aligned_cols=54  Identities=22%  Similarity=0.217  Sum_probs=37.9

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCe
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDD  200 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~  200 (339)
                      +.+.+.++.+|+... +|..|.++...|+.+|.+.+++..   +..+.+.++ .+|+.-
T Consensus        54 ~~g~~~~~~~vv~~S-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v  110 (310)
T d1y7la1          54 KDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNL  110 (310)
T ss_dssp             HTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             HcCCCCCCceeeeec-CCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCce
Confidence            445667776655544 699999999999999996555542   344566666 788753

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=85.25  E-value=2.9  Score=33.91  Aligned_cols=99  Identities=15%  Similarity=0.080  Sum_probs=60.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHh---CC--C--eeeeCCChhhHHHHHHHhC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKF---GF--D--DAFNYKEEPDLDAALKRCF  218 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~---g~--~--~v~~~~~~~~~~~~v~~~~  218 (339)
                      ..+.+|++||=..  +++|-..+..+ ..|+ +|+.+..++...+.+++.+   |.  +  .++..    |.-+.++...
T Consensus       140 ~~~~~g~~VLdlf--~~~G~~sl~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~----d~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLF--SYTAAFSVAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM----DVFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEET--CTTTHHHHHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES----CHHHHHHHHH
T ss_pred             HHhhCCCceeecC--CCCcHHHHHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc----cHHHHHHHHH
Confidence            4577899998664  33344444433 3577 8999999988777776432   32  1  23333    3334444322


Q ss_pred             -CC-CccEEEEC---CC-h------------hhHHHHHHhhccCCEEEEEec
Q 037444          219 -PQ-GIDIYFEN---VG-G------------KMLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       219 -~g-~~d~vid~---~g-~------------~~~~~~~~~l~~~G~~v~~g~  252 (339)
                       .+ .||+||-=   .+ +            +.+..++++|+++|.++.+..
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence             23 79999851   11 0            145678899999999987644

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.10  E-value=0.39  Score=36.71  Aligned_cols=30  Identities=17%  Similarity=0.092  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      |+|+|+ |+.|+.++..+..+|.+|+++...
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            789997 999999999999999999999864

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=85.04  E-value=0.32  Score=36.02  Aligned_cols=32  Identities=16%  Similarity=0.040  Sum_probs=26.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSA  183 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~  183 (339)
                      ++++|+|.|| |.+|.-++..++.+|.+|.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            5789999997 9999999999999998655543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.95  E-value=0.21  Score=35.91  Aligned_cols=90  Identities=11%  Similarity=-0.062  Sum_probs=50.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLA---GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENV  229 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~---ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~  229 (339)
                      -+|.|.||+|-+|+-.++++..+   ..++..++++...-+.+. ..+.+..+  .   +    +....-.+.|++|-|.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~--~---~----~~~~~~~~~d~vf~a~   72 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRV--G---D----VDSFDFSSVGLAFFAA   72 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEEC--E---E----GGGCCGGGCSEEEECS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchh--c---c----chhhhhccceEEEecC
Confidence            46999999999999999998643   457777664432211111 00001111  0   0    0000012689999999


Q ss_pred             ChhhHHH-HHHhhccCCEEEEEec
Q 037444          230 GGKMLDA-VLLNMRLRGRIAVCGM  252 (339)
Q Consensus       230 g~~~~~~-~~~~l~~~G~~v~~g~  252 (339)
                      +...... .-.....+.++++.+.
T Consensus        73 p~~~s~~~~~~~~~~g~~VID~Ss   96 (144)
T d2hjsa1          73 AAEVSRAHAERARAAGCSVIDLSG   96 (144)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEETTC
T ss_pred             CcchhhhhccccccCCceEEeech
Confidence            9765444 4445555666666543

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.86  E-value=1.1  Score=36.16  Aligned_cols=94  Identities=9%  Similarity=0.079  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhC----C--C---eeeeCCChhhHHHHHHHhCCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFG----F--D---DAFNYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g----~--~---~v~~~~~~~~~~~~v~~~~~g  220 (339)
                      ...+|||.|+  |-|..+-.+++..+. +|.++.-.++=.+.+++-+.    +  +   +++..    |..+.+++ +.+
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~----Da~~~l~~-~~~  161 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIA----NGAEYVRK-FKN  161 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES----CHHHHGGG-CSS
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhh----hHHHHHhc-CCC
Confidence            3579999995  445556677777654 89999998887777763221    1  1   22221    44445544 334


Q ss_pred             CccEEEE-CCC-----------hhhHHHHHHhhccCCEEEEEe
Q 037444          221 GIDIYFE-NVG-----------GKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       221 ~~d~vid-~~g-----------~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+|+||- +..           .+.+..+.++|+++|.++.-.
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            8999874 211           125778999999999988653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.83  E-value=1.2  Score=34.53  Aligned_cols=34  Identities=29%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCCEEEEEeC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFA-KLAGCYVVGSAG  184 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la-~~~ga~V~~~~~  184 (339)
                      -+|.+|+|.| .|.+|..+++.+ +..|++|++++.
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            4688999999 599999999877 578999998873

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.82  E-value=0.55  Score=38.45  Aligned_cols=34  Identities=18%  Similarity=0.204  Sum_probs=29.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          152 GEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      ..+|+|+|| |..|+.++..+...|.+|.++..++
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            568999996 9999999988888899999998664

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=84.78  E-value=2.1  Score=31.53  Aligned_cols=88  Identities=10%  Similarity=0.053  Sum_probs=50.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhC----CCeeeeCCChhhHHHHHHHhCCCCccEEEEC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFG----FDDAFNYKEEPDLDAALKRCFPQGIDIYFEN  228 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~  228 (339)
                      +|.|.||+|-+|.-+++++..+ ..++..+..+...-+.+. +..    ....+...+   ..+ +..    ..|++|-|
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~-~~~p~~~~~~~~~~~~---~~~-~~~----~~dvvf~a   73 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLE-EIFPSTLENSILSEFD---PEK-VSK----NCDVLFTA   73 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHH-HHCGGGCCCCBCBCCC---HHH-HHH----HCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccc-ccCchhhccccccccC---HhH-hcc----ccceEEEc
Confidence            6899999999999999998765 557777764433222222 211    112222222   111 111    48999999


Q ss_pred             CChhhHHHHHHhhccCCEEEEEe
Q 037444          229 VGGKMLDAVLLNMRLRGRIAVCG  251 (339)
Q Consensus       229 ~g~~~~~~~~~~l~~~G~~v~~g  251 (339)
                      .+........... .+-++|+.+
T Consensus        74 ~p~~~s~~~~~~~-~~~~VIDlS   95 (176)
T d1vkna1          74 LPAGASYDLVREL-KGVKIIDLG   95 (176)
T ss_dssp             CSTTHHHHHHTTC-CSCEEEESS
T ss_pred             cccHHHHHHHHhh-ccceEEecC
Confidence            9976544444332 455666554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=84.53  E-value=0.39  Score=37.57  Aligned_cols=31  Identities=23%  Similarity=0.140  Sum_probs=27.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~  185 (339)
                      +|+|+|| |..|+.++..++..|. +|+++..+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~   33 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEAT   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECC
Confidence            5899997 9999999988888997 69998865

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.38  E-value=0.69  Score=33.37  Aligned_cols=35  Identities=20%  Similarity=-0.032  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSK  186 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~  186 (339)
                      -+.+|+|+|| |.+|.=++..+.++|| .|+++.+.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4678999997 9999998888889998 577777643

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=84.35  E-value=0.33  Score=39.55  Aligned_cols=33  Identities=15%  Similarity=0.211  Sum_probs=28.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .+|||+||+|-+|..++..+...|..|+++...
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            479999999999999999988889988876543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.28  E-value=0.44  Score=37.18  Aligned_cols=31  Identities=23%  Similarity=0.173  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      |+|+|| |..|++++..+...|.+|+++..++
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            889997 9999998888888899999998654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=84.26  E-value=3.5  Score=29.97  Aligned_cols=44  Identities=18%  Similarity=0.013  Sum_probs=36.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGF  198 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~  198 (339)
                      .+|-|+| .|.+|...+.-+...|.+|++..+++++.+.+. +.++
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~   45 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA   45 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence            3578888 499999988888888999999999999998887 4444

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.02  E-value=0.44  Score=35.20  Aligned_cols=94  Identities=14%  Similarity=0.068  Sum_probs=59.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeee---------eCCChhhHHHHHHHhCCC
Q 037444          150 KKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAF---------NYKEEPDLDAALKRCFPQ  220 (339)
Q Consensus       150 ~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~---------~~~~~~~~~~~v~~~~~g  220 (339)
                      -.|.+++|.|-+.-+|.=+..++...||.|+........ ..   ..+++..+         .+... .+.+..+     
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~-~lk~~~~-----   96 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ-KF---TRGESLKLNKHHVEDLGEYSED-LLKKCSL-----   96 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE-EE---ESCCCSSCCCCEEEEEEECCHH-HHHHHHH-----
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc-cc---ccccceeeeeeccccccccchh-HHhhccc-----
Confidence            468999999998899998888888899999865432111 00   11111111         11211 2333332     


Q ss_pred             CccEEEECCChhhHHHHHHhhccCCEEEEEecc
Q 037444          221 GIDIYFENVGGKMLDAVLLNMRLRGRIAVCGMI  253 (339)
Q Consensus       221 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  253 (339)
                      ..|+++-++|.+.+.---+++++|-.++++|..
T Consensus        97 ~aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1          97 DSDVVITGVPSENYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             HCSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred             cCCEEEEccCCCccccChhhcccCceEeecccc
Confidence            389999999976543344678888888888763

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.90  E-value=0.31  Score=38.43  Aligned_cols=46  Identities=11%  Similarity=-0.127  Sum_probs=32.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNK  195 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~  195 (339)
                      ...+|.+||=+|. | .|..+..+++..+.+|+++.-|+...+.+++.
T Consensus        48 ~~~~g~~vLDlGc-G-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~~   93 (257)
T d2a14a1          48 GGLQGDTLIDIGS-G-PTIYQVLAACDSFQDITLSDFTDRNREELEKW   93 (257)
T ss_dssp             TSCCEEEEEESSC-T-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-C-CCHhHHHHhccccCcEEEecCCHHHHHHHHHH
Confidence            4467788888874 3 45555555554444899999999988888743

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=83.85  E-value=3.7  Score=30.71  Aligned_cols=71  Identities=17%  Similarity=0.130  Sum_probs=45.3

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCcc
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGID  223 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga-~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d  223 (339)
                      ..+++ .|.+||=.|. | .|..++. |..+|+ +|+++..+++..+.+++......++..+-.        + ..+.+|
T Consensus        43 ~~~dl-~Gk~VLDlGc-G-tG~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~--------~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGT-G-NGILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVS--------E-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETC-T-TCHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGG--------G-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCC-C-CcHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEehh--------h-cCCcce
Confidence            44555 5899998884 3 4555544 444676 799999999988888843332344443221        1 235899


Q ss_pred             EEEEC
Q 037444          224 IYFEN  228 (339)
Q Consensus       224 ~vid~  228 (339)
                      +||..
T Consensus       110 ~Vi~N  114 (197)
T d1ne2a_         110 TWIMN  114 (197)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99864

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=83.43  E-value=2.8  Score=30.39  Aligned_cols=92  Identities=16%  Similarity=0.136  Sum_probs=56.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCH--HHHHHHHHHh----CC-C-e--------ee--------eCCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSK--EKVDLLKNKF----GF-D-D--------AF--------NYKEEP  208 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~--~~~~~~~~~~----g~-~-~--------v~--------~~~~~~  208 (339)
                      +|.|.| -|-+|+.+.+++... ..+|.++-...  +....+. ++    |. . .        ++        ..++  
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~--   78 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD--   78 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC--
Confidence            588988 699999999887765 45777775432  3333333 22    11 0 0        11        1111  


Q ss_pred             hHHHHHHHhCC-C-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc
Q 037444          209 DLDAALKRCFP-Q-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       209 ~~~~~v~~~~~-g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                           ..++.- . ++|+|+||+|. ...+.+..+|..+-+-|.+..+.
T Consensus        79 -----p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~  122 (166)
T d1gado1          79 -----PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPS  122 (166)
T ss_dssp             -----GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred             -----hHHCCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccc
Confidence                 111111 2 79999999995 57778889998887667676543

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=83.26  E-value=6.3  Score=31.87  Aligned_cols=111  Identities=21%  Similarity=0.206  Sum_probs=65.3

Q ss_pred             HHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCeeeeCCCh--------
Q 037444          139 AYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDDAFNYKEE--------  207 (339)
Q Consensus       139 A~~~l~~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~v~~~~~~--------  207 (339)
                      |++.+.....-.+..+|+. ..+|..|.++...++..|.+++++..   +.++.+.++ .+|++-++.....        
T Consensus        62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~  139 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI  139 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence            5555544333334444444 44699999999999999997777653   345677777 8888533211110        


Q ss_pred             ----------------hh-------HHHHHHHhCCCCccEEEECCCh-hh---HHHHHHhhccCCEEEEEec
Q 037444          208 ----------------PD-------LDAALKRCFPQGIDIYFENVGG-KM---LDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       208 ----------------~~-------~~~~v~~~~~g~~d~vid~~g~-~~---~~~~~~~l~~~G~~v~~g~  252 (339)
                                      ..       ...++.+. .+.+|.+|-++|+ .+   +...++.+.+..+++.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhhhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                            00       11112221 1368999999985 33   3355556667778877643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.01  E-value=0.43  Score=38.11  Aligned_cols=31  Identities=26%  Similarity=0.201  Sum_probs=27.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      +|+|+|| |..|+.++..+...|.+|+++..+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESS   32 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence            5899997 999999999998899999999865

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.84  E-value=0.63  Score=35.44  Aligned_cols=30  Identities=13%  Similarity=-0.035  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      |+|+|+ |+.|+.++..|..+|.+|.++...
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            789997 999999999999999999999864

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=82.64  E-value=5.7  Score=28.80  Aligned_cols=98  Identities=13%  Similarity=0.108  Sum_probs=58.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC---CHHHHHHHHHHhCC-----C-e--------eeeCCChhhH--HHH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAG---SKEKVDLLKNKFGF-----D-D--------AFNYKEEPDL--DAA  213 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~---~~~~~~~~~~~~g~-----~-~--------v~~~~~~~~~--~~~  213 (339)
                      +|.|.| -|-+|+++.+.+-.. ..+++++-.   +.+....+. ++-.     . .        .++...- .+  ...
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I-~~~~~~~   79 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPI-TIFQERD   79 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEE-EEECCSS
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEE-EEEECCC
Confidence            688999 699999998776644 568877743   345555554 3211     0 0        0100000 00  001


Q ss_pred             HHHhCC-C-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc
Q 037444          214 LKRCFP-Q-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       214 v~~~~~-g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ..++.- . ++|+|+||+|. ...+.+..++..+-+-|.+..+.
T Consensus        80 p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~  123 (169)
T d1u8fo1          80 PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPS  123 (169)
T ss_dssp             GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCC
T ss_pred             hhhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccc
Confidence            222222 3 89999999996 57778888999887777776543

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=82.54  E-value=2.4  Score=35.51  Aligned_cols=60  Identities=18%  Similarity=0.093  Sum_probs=42.8

Q ss_pred             HHHHHHHh-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHHhCCCe
Q 037444          139 AYAGLYEV-CSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG---SKEKVDLLKNKFGFDD  200 (339)
Q Consensus       139 A~~~l~~~-~~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~---~~~~~~~~~~~~g~~~  200 (339)
                      |++++.+. .+++++.+ +|...+|..|.+++..|+.+|.+++++..   ++++.+.++ .+|++-
T Consensus       130 A~~~i~~A~~~~~~g~~-VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeV  193 (382)
T d1wkva1         130 AVEIISRLSRRVEKGSL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQV  193 (382)
T ss_dssp             HHHHHHHHTTTSCTTCE-EEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEE
T ss_pred             HHHHHHHHHhccCCCCE-EEEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCcce
Confidence            44444332 34677775 45555799999999999999998777764   446777777 898853

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=82.25  E-value=5.1  Score=29.19  Aligned_cols=98  Identities=9%  Similarity=0.057  Sum_probs=57.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCEEEEEeC--CHHHHHHHHHHhCC-----C-e--------eeeCCChhhH--H
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA----GCYVVGSAG--SKEKVDLLKNKFGF-----D-D--------AFNYKEEPDL--D  211 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~----ga~V~~~~~--~~~~~~~~~~~~g~-----~-~--------v~~~~~~~~~--~  211 (339)
                      +|.|.| -|-+|+++.+.+-..    ..+|+++-.  +.+....+. ++.-     . .        +++...- .+  .
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i-~i~~~   79 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKI-RVDAN   79 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEE-EEECC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEE-EEEec
Confidence            688998 699999998776532    346766652  334444443 2211     0 0        1110000 00  0


Q ss_pred             HHHHHhCC-C-CccEEEECCCh-hhHHHHHHhhccCCEEEEEeccc
Q 037444          212 AALKRCFP-Q-GIDIYFENVGG-KMLDAVLLNMRLRGRIAVCGMIS  254 (339)
Q Consensus       212 ~~v~~~~~-g-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~  254 (339)
                      ....++.. . ++|+|+||+|. .....+..+|..+-+-|.+..+.
T Consensus        80 ~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~  125 (173)
T d1obfo1          80 RNPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG  125 (173)
T ss_dssp             SCGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred             CCHHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence            01222222 3 89999999996 67788899999987777776543

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.82  Score=36.21  Aligned_cols=48  Identities=8%  Similarity=-0.195  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC
Q 037444          148 SPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFG  197 (339)
Q Consensus       148 ~~~~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g  197 (339)
                      +..+|.++|=.|. |+ |...+..+...+.+|+++..++...+.+++.+.
T Consensus        51 g~~~g~~vLDiGc-G~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          51 GEVSGRTLIDIGS-GP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             SCSCCSEEEEETC-TT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCCCCcEEEEecc-CC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            4457889999985 43 444444444556699999999999998885454

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.07  E-value=0.78  Score=34.86  Aligned_cols=30  Identities=23%  Similarity=0.109  Sum_probs=26.8

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      |+|+|+ |+.|+.++..|...|.+|.++...
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence            788896 999999999999999999999754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=1.7  Score=30.98  Aligned_cols=60  Identities=12%  Similarity=0.018  Sum_probs=48.4

Q ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhCCCeeeeCC
Q 037444          145 EVCSPKKGEYVYVSAASGAVGQLVGQFAKLAG--CYVVGSAGSKEKVDLLKNKFGFDDAFNYK  205 (339)
Q Consensus       145 ~~~~~~~g~~vlI~ga~g~~G~~ai~la~~~g--a~V~~~~~~~~~~~~~~~~~g~~~v~~~~  205 (339)
                      +.+++..-+.+++....-..-..++..+|.++  .++++.+.+++..+.++ ++|++.+++..
T Consensus        65 ~~a~i~~a~~vi~~~~~d~~n~~~~~~~r~~~~~~~iia~~~~~~~~~~l~-~~Gad~vi~p~  126 (153)
T d1id1a_          65 KKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK-MVHPDIILSPQ  126 (153)
T ss_dssp             HHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH-TTCCSEEECHH
T ss_pred             HHhccccCCEEEEccccHHHHHHHHHHHHHhCCCCceEEEEcCHHHHHHHH-HCCCCEEECHH
Confidence            66788888888887665666677888888763  38999999999999998 99999988654

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.71  E-value=0.64  Score=35.66  Aligned_cols=31  Identities=16%  Similarity=0.113  Sum_probs=27.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      -|+|+|+ |+.|+.++..|..+|.+|.++...
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~   37 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKR   37 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            3789996 999999988888899999999864

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.65  E-value=0.65  Score=35.46  Aligned_cols=31  Identities=19%  Similarity=0.149  Sum_probs=27.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      .++|+|+ |+.|+.++..|+.+|.+|.++...
T Consensus         7 DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            3789996 999999999999999999999754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=81.44  E-value=1.1  Score=37.48  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=27.1

Q ss_pred             CCEEEEEcCCchHHHHHHH-HHHHcCCEEEEEe
Q 037444          152 GEYVYVSAASGAVGQLVGQ-FAKLAGCYVVGSA  183 (339)
Q Consensus       152 g~~vlI~ga~g~~G~~ai~-la~~~ga~V~~~~  183 (339)
                      +.+|||+||+|-+|..++. |++..|.+|+++.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence            5689999999999988764 6677899999985

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.32  E-value=0.76  Score=35.34  Aligned_cols=30  Identities=23%  Similarity=0.034  Sum_probs=27.2

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGS  185 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~  185 (339)
                      |+|+|+ |+.|+.+...|...|.+|.++...
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~   38 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERY   38 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEecc
Confidence            788996 999999999999999999999854

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.21  E-value=0.71  Score=34.50  Aligned_cols=31  Identities=13%  Similarity=0.126  Sum_probs=27.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 037444          153 EYVYVSAASGAVGQLVGQFAKLAGCYVVGSAG  184 (339)
Q Consensus       153 ~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~  184 (339)
                      .+|+|+|| |+.|+.++..|.+.|.+|+++..
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~   36 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEG   36 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCCEEECC
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEe
Confidence            57999997 99999988888889999988864

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=80.71  E-value=2  Score=31.29  Aligned_cols=82  Identities=12%  Similarity=0.127  Sum_probs=54.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCChh
Q 037444          154 YVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVGGK  232 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g~~  232 (339)
                      +|.|+|. |.+|...+..++.. +.++++++....+      ......+..+.+.       ... ...+|+|+.|++..
T Consensus         5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~~-------~~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVADV-------DKH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGGG-------GGT-TTTCSEEEECSCTT
T ss_pred             eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchhh-------hhh-ccccceEEEeCCCc
Confidence            6899994 99999888777765 6687777644321      1111222222221       111 13699999999964


Q ss_pred             -hHHHHHHhhccCCEEEEE
Q 037444          233 -MLDAVLLNMRLRGRIAVC  250 (339)
Q Consensus       233 -~~~~~~~~l~~~G~~v~~  250 (339)
                       +.+.+.++|..|-.++.+
T Consensus        70 ~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          70 TDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             THHHHHHHHHTTTSEEECC
T ss_pred             ccHHHHHHHHHCCCcEEEe
Confidence             788999999998887754

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.64  E-value=0.73  Score=35.40  Aligned_cols=31  Identities=16%  Similarity=0.186  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          155 VYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       155 vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      |+|+|+ |..|+.++..+...|.+|.++..++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            889996 9999999888888899999998764

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.45  E-value=5.6  Score=31.54  Aligned_cols=97  Identities=16%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH---HhCCCe-eeeCCChhhHHHHHHHhCCCC
Q 037444          147 CSPKKGEYVYVSAASGAVGQLVGQFAKLA-GCYVVGSAGSKEKVDLLKN---KFGFDD-AFNYKEEPDLDAALKRCFPQG  221 (339)
Q Consensus       147 ~~~~~g~~vlI~ga~g~~G~~ai~la~~~-ga~V~~~~~~~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~v~~~~~g~  221 (339)
                      ...++|++||=..| ++=|. +.++|... +.+|++...+..+...+++   .+|... ++...+. ...   .....+.
T Consensus        98 L~~~~g~~vLD~CA-aPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~---~~~~~~~  171 (284)
T d1sqga2          98 LAPQNGEHILDLCA-APGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPS---QWCGEQQ  171 (284)
T ss_dssp             HCCCTTCEEEEESC-TTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTH---HHHTTCC
T ss_pred             cCccccceeEeccC-ccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccc---hhccccc
Confidence            46789999876643 33333 23444444 4689999999888755542   567643 2322221 211   1122347


Q ss_pred             ccEEEE---CCChhh--------------------------HHHHHHhhccCCEEEE
Q 037444          222 IDIYFE---NVGGKM--------------------------LDAVLLNMRLRGRIAV  249 (339)
Q Consensus       222 ~d~vid---~~g~~~--------------------------~~~~~~~l~~~G~~v~  249 (339)
                      ||.|+-   |+|..+                          +..++++|+++|++|.
T Consensus       172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvY  228 (284)
T d1sqga2         172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY  228 (284)
T ss_dssp             EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            988765   666442                          3457778888888764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.36  E-value=1.4  Score=32.92  Aligned_cols=85  Identities=18%  Similarity=0.163  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCeeeeCCChhhHHHHHHHhCCCCccEEEECCC
Q 037444          151 KGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRCFPQGIDIYFENVG  230 (339)
Q Consensus       151 ~g~~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~g~~d~vid~~g  230 (339)
                      .+.+|.|+|- |.+|..++++++.+|.+|+...+....        .........   ++.+.+++     .|++.-++.
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~--------~~~~~~~~~---~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKL--------PLGNATQVQ---HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCC--------CCTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeeccccccc--------hhhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence            5789999995 999999999999999999999865321        111111111   34444433     688888776


Q ss_pred             -hh-----hHHHHHHhhccCCEEEEEec
Q 037444          231 -GK-----MLDAVLLNMRLRGRIAVCGM  252 (339)
Q Consensus       231 -~~-----~~~~~~~~l~~~G~~v~~g~  252 (339)
                       .+     .=.+.++.++++..+|.++.
T Consensus       106 lt~~T~~li~~~~l~~mk~~a~lIN~aR  133 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPGSLLINASR  133 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence             22     22477888888888887754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.26  E-value=0.74  Score=37.34  Aligned_cols=32  Identities=22%  Similarity=0.005  Sum_probs=28.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCH
Q 037444          154 YVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSK  186 (339)
Q Consensus       154 ~vlI~ga~g~~G~~ai~la~~~ga~V~~~~~~~  186 (339)
                      .|+|+|| |..|++++..++..|.+|.++...+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            5899997 9999999999999999999988653