BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037445
MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW
TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN
PRRQANVPGTSSVRATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGRGRNKNLQEMPPQ
SVEVQVESKENLELEEGGEIESESKITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEV
LGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGARVTRSRMNALNLGFDCGETAA
TESKITRKGRGRKKKLQEMPPQSSSEVETEGKERLVPEEVSKTCEVQAD

High Scoring Gene Products

Symbol, full name Information P value
AT4G14490 protein from Arabidopsis thaliana 1.6e-31
AT3G02400 protein from Arabidopsis thaliana 1.5e-29
RNF8
Uncharacterized protein
protein from Gallus gallus 7.8e-05
KAPP
AT5G19280
protein from Arabidopsis thaliana 0.00061

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037445
        (349 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2129785 - symbol:AT4G14490 species:3702 "Arabi...   346  1.6e-31   1
TAIR|locus:2074557 - symbol:AT3G02400 species:3702 "Arabi...   333  1.5e-29   1
UNIPROTKB|E1C4A8 - symbol:RNF8 "Uncharacterized protein" ...   117  7.8e-05   2
TAIR|locus:2150220 - symbol:KAPP "kinase associated prote...   117  0.00061   1


>TAIR|locus:2129785 [details] [associations]
            symbol:AT4G14490 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000253
            InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 SMART:SM00240
            EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.60.200.20
            SUPFAM:SSF49879 EMBL:Z97336 EMBL:AL161539 EMBL:AY099748
            EMBL:AY128865 IPI:IPI00546778 PIR:B71407 RefSeq:NP_193185.1
            UniGene:At.33274 PDB:1UHT PDBsum:1UHT ProteinModelPortal:O23305
            SMR:O23305 PRIDE:O23305 EnsemblPlants:AT4G14490.1 GeneID:827096
            KEGG:ath:AT4G14490 TAIR:At4g14490 eggNOG:NOG273574
            HOGENOM:HOG000155331 InParanoid:O23305 OMA:QANARKR PhylomeDB:O23305
            ProtClustDB:CLSN2915799 EvolutionaryTrace:O23305
            Genevestigator:O23305 GermOnline:AT4G14490 Uniprot:O23305
        Length = 386

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 68/126 (53%), Positives = 88/126 (69%)

Query:     1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
             M  P ++L+ V+GPR G+ +++KPGS IR+GRIVRGN++ IKD GIS+KHL IES SG W
Sbjct:     1 MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDSGNW 60

Query:    61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
              IQDL S NGT LNS  L P T  +L + D IKLG+ T+I V  +  D Q++ +    RN
Sbjct:    61 VIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVIDDFQEKKLT---RN 117

Query:   121 PRRQAN 126
              RRQAN
Sbjct:   118 NRRQAN 123


>TAIR|locus:2074557 [details] [associations]
            symbol:AT3G02400 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0006302 "double-strand break repair" evidence=RCA] [GO:0010332
            "response to gamma radiation" evidence=RCA] InterPro:IPR000253
            InterPro:IPR008984 InterPro:IPR017956 Pfam:PF00498 PROSITE:PS50006
            SMART:SM00240 SMART:SM00384 EMBL:AC021640 EMBL:CP002686
            GO:GO:0003677 Gene3D:2.60.200.20 SUPFAM:SSF49879 HSSP:P46014
            IPI:IPI00539392 RefSeq:NP_186889.1 UniGene:At.53159
            ProteinModelPortal:Q9M8A0 SMR:Q9M8A0 PRIDE:Q9M8A0
            EnsemblPlants:AT3G02400.1 GeneID:821210 KEGG:ath:AT3G02400
            TAIR:At3g02400 HOGENOM:HOG000209985 InParanoid:Q9M8A0 OMA:IELRKKS
            PhylomeDB:Q9M8A0 ProtClustDB:CLSN2915716 ArrayExpress:Q9M8A0
            Genevestigator:Q9M8A0 Uniprot:Q9M8A0
        Length = 585

 Score = 333 (122.3 bits), Expect = 1.5e-29, P = 1.5e-29
 Identities = 111/358 (31%), Positives = 169/358 (47%)

Query:     1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
             M PP +KL   +GPR+G+++ FKPGS IRIGRIVRGN++ IKD GIS+KHL I S S  W
Sbjct:     1 MVPPLLKLDFTQGPRAGDSLGFKPGSTIRIGRIVRGNEIAIKDAGISTKHLRIVSDSENW 60

Query:    61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM---ITMDSQDESVA-K 116
              I DL S NGT LNS T+  +TP +L   D IKLG+ T+I V     +    Q+  +  +
Sbjct:    61 IIHDLGSSNGTILNSDTIDSDTPVNLSHGDEIKLGEYTSILVNFGSDVVQAPQEHKLPPR 120

Query:   117 PKRNPRR-QANVPGTSSVRATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGRG-RNKNL 174
             P+RN +R  A+ P    + +       + +P  T    G   ++++ + K  R  R KNL
Sbjct:   121 PRRNNKRLAASDPDPDPIESV------QEKPKRT---RGSSKQEENELPKSTRASRKKNL 171

Query:   175 QEMPPQSVEVQVXXXXXXXXXXXXXXXXXXXXTKKGRGRSKDLQEMPLDGGKVKIESEEN 234
              ++  +  E+ V                      K     + ++E    G   K  S   
Sbjct:   172 DDIADKEEELDVEIEKVVKARVGRPRKNAGSAIAK---EEEVVEEKKRVGRPRKNASSAI 228

Query:   235 LEPLEVLGVQVDGKENFRPGKETS---KKCQVQVDGKEKT-NVTLIAGA-RVTRSRM--N 287
              E  EV+  +  G    R GK +    K  +++V+   K   ++ +    RVTRS+   N
Sbjct:   229 TEEEEVVE-EKKGNSRARRGKNSEIVQKSIKLEVEDTPKAVEISEVKSRKRVTRSKQIEN 287

Query:   288 ---ALNLGFDCGETAATESKITXXXXXXXXXLQEMPPQSSSEVETEGKERLVPEEVSK 342
                 L +  +   T +T SK T         L+ +  Q+    ++  K + + EE SK
Sbjct:   288 ECFGLEVKDEKRTTRSTRSKTTEIGGESFLELEMVLNQAR---KSRAKRKKMDEEPSK 342


>UNIPROTKB|E1C4A8 [details] [associations]
            symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
            to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
            ubiquitination" evidence=IEA] [GO:0016881 "acid-amino acid ligase
            activity" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
            InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
            Pfam:PF00498 PROSITE:PS50006 SMART:SM00240 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3
            EMBL:AADN02011899 IPI:IPI00821868 Ensembl:ENSGALT00000038176
            OMA:PLMISRK Uniprot:E1C4A8
        Length = 255

 Score = 117 (46.2 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 39/147 (26%), Positives = 68/147 (46%)

Query:    17 GETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIE-SVSGKWTIQDLDSCN 69
             G  +  + G+++ +GR   G D+T +         IS KH + + +  G+WT++D  S N
Sbjct:    20 GGWLLLEAGTQVTVGR---GLDLTYQLVSKTCPLMISRKHCVFQQNAEGQWTVKDNKSLN 76

Query:    70 GTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQ--ANV 127
             G +LN   L P+  + + E D I+LG    + ++       +  V K +    R   A  
Sbjct:    77 GVWLNKQRLDPSKTYPIAEGDRIQLG----VPLENKETAEYEYEVIKEEWEKIRPFLAQR 132

Query:   128 PGTSSVRATSGRKKAEAEPVETLGLEG 154
                   R++  ++K  +E  ET G EG
Sbjct:   133 SDLGKARSSRSKRKFTSEESETSGSEG 159

 Score = 38 (18.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query:   244 QVDGKENFRPGKETSKKCQVQVDGKEKTNV 273
             +  G E   P    SK+ +V  DG+  +N+
Sbjct:   153 ETSGSEG--PSNSRSKRDRVSCDGEPLSNL 180


>TAIR|locus:2150220 [details] [associations]
            symbol:KAPP "kinase associated protein phosphatase"
            species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
            activity" evidence=IEA] [GO:0004722 "protein serine/threonine
            phosphatase activity" evidence=IEA;ISS] [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0008287 "protein serine/threonine
            phosphatase complex" evidence=IEA] [GO:0007165 "signal
            transduction" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA
            processing" evidence=RCA] [GO:0016310 "phosphorylation"
            evidence=RCA] [GO:0042742 "defense response to bacterium"
            evidence=RCA] [GO:0019901 "protein kinase binding" evidence=IPI]
            [GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA]
            [GO:0009934 "regulation of meristem structural organization"
            evidence=IMP] InterPro:IPR000253 InterPro:IPR000222
            InterPro:IPR001932 InterPro:IPR008984 Pfam:PF00481 Pfam:PF00498
            PROSITE:PS01032 PROSITE:PS50006 SMART:SM00240 SMART:SM00331
            SMART:SM00332 GO:GO:0005886 EMBL:CP002688 GO:GO:0007165
            GO:GO:0006470 GO:GO:0004722 GO:GO:0046872 Gene3D:2.60.200.20
            SUPFAM:SSF49879 GO:GO:0004721 Gene3D:3.60.40.10 SUPFAM:SSF81606
            GO:GO:0009934 KO:K01090 InterPro:IPR015655 PANTHER:PTHR13832
            IPI:IPI00938784 RefSeq:NP_001154720.1 UniGene:At.10199
            ProteinModelPortal:F4K124 SMR:F4K124 PRIDE:F4K124
            EnsemblPlants:AT5G19280.2 GeneID:832048 KEGG:ath:AT5G19280
            OMA:DFDILRT InterPro:IPR016660 PIRSF:PIRSF016465 Uniprot:F4K124
        Length = 591

 Score = 117 (46.2 bits), Expect = 0.00062, P = 0.00061
 Identities = 38/119 (31%), Positives = 60/119 (50%)

Query:     8 LIMVRGPRSG--ETIEFKPGSK--IRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWT 61
             L ++ GP  G    +     SK  +++GR V  +D+ +KD  +S KH  I   S   KW 
Sbjct:   184 LEVIAGPAIGLQHAVNSTSSSKLPVKLGR-VSPSDLALKDSEVSGKHAQITWNSTKFKWE 242

Query:    62 IQDLDSCNGTFLNSTTLP-PN-------TPFDLRENDTIKLGDCTTISVQMITMDSQDE 112
             + D+ S NGT +NS ++  P+        P +L  +D I LG  T + V++    SQ+E
Sbjct:   243 LVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRI---SSQNE 298


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.129   0.357    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      349       320   0.00084  116 3  11 23  0.38    35
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  181 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.10u 0.10s 25.20t   Elapsed:  00:00:02
  Total cpu time:  25.10u 0.10s 25.20t   Elapsed:  00:00:02
  Start:  Sat May 11 14:07:19 2013   End:  Sat May 11 14:07:21 2013

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