BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037445
(349 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449433275|ref|XP_004134423.1| PREDICTED: FHA domain-containing protein At4g14490-like [Cucumis
sativus]
Length = 406
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 152/285 (53%), Gaps = 54/285 (18%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSG 58
ME + LI+V+GPR GET++F PG+ IRIGRIVRGN V IKD GIS+KHL I ESVSG
Sbjct: 1 MESSSITLIIVKGPREGETLDFPPGATIRIGRIVRGNSVAIKDAGISTKHLSIESESVSG 60
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPK 118
W ++DLDS NGTF+N LPP+ F L + DTIK G+ T+I V+ ++S +E + +
Sbjct: 61 NWMLRDLDSSNGTFVNDIKLPPHDAFALHDGDTIKCGELTSIFVR---INSNEE--PRSR 115
Query: 119 RNPRRQANVPGTS-----SVRATSGRKKAEAEPVETLGLEGGQIEDQSRI--NKKGRGRN 171
RNPRR+A TS SV T GR++ E +G + + R ++KGRG
Sbjct: 116 RNPRRKAVEKCTSSDVVGSVAGTRGRRRKVVEEDSVVGGCNDAMVESGRCLRSRKGRGLK 175
Query: 172 KNLQEMPPQS------VEVQVESKE-NLELEE---------------------------- 196
+ P ++V ES N+ + E
Sbjct: 176 DEIDSQVPDCKKTEDKIDVGRESGNVNIAVNEPGPKIATRSTRRTKNTVSLATNSVLEIV 235
Query: 197 ---GGEIESESKITKKG-RGRSKDLQEMPLDGGKV-KIESEENLE 236
GGE+++E+K T+ G RGR K E PLD V K+E EN+E
Sbjct: 236 PHVGGEVKAEAKKTRAGTRGRKKLQNEPPLDSSTVIKLEHIENVE 280
>gi|297800790|ref|XP_002868279.1| hypothetical protein ARALYDRAFT_493457 [Arabidopsis lyrata subsp.
lyrata]
gi|297314115|gb|EFH44538.1| hypothetical protein ARALYDRAFT_493457 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 119/201 (59%), Gaps = 18/201 (8%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M+ P ++L+ V+GPR G+ +E+K GS IR+GRIVRGN++ IKD GIS+KHL I SVSG W
Sbjct: 1 MDTPSLRLLFVKGPRKGDALEYKLGSTIRVGRIVRGNEIAIKDAGISTKHLWIGSVSGNW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
+QDL S NGT LNS L P TP DL + D I+ G+ T+I V + D +E KP RN
Sbjct: 61 VVQDLGSSNGTLLNSKDLDPETPVDLGDGDVIEFGEYTSIVVNFVIDDVLEE---KPPRN 117
Query: 121 PRRQANVPGTSSVRATSG-------------RKKAEAEPVETLGLEGGQIEDQSRINKKG 167
RRQAN V +S RK + E E LG+ G +E + + KK
Sbjct: 118 NRRQANARKRIRVSESSNLDVKIASKPSSRVRKVRKIEDSEKLGVTDG-LEKELLVEKKV 176
Query: 168 RGRN-KNLQEMPPQSVEVQVE 187
RN +++Q SV+V++E
Sbjct: 177 NFRNVESIQSSCVNSVKVKIE 197
>gi|15233463|ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
gi|73921130|sp|O23305.1|Y4449_ARATH RecName: Full=FHA domain-containing protein At4g14490
gi|2244805|emb|CAB10228.1| hypothetical protein [Arabidopsis thaliana]
gi|7268155|emb|CAB78491.1| hypothetical protein [Arabidopsis thaliana]
gi|20466564|gb|AAM20599.1| unknown protein [Arabidopsis thaliana]
gi|22136374|gb|AAM91265.1| unknown protein [Arabidopsis thaliana]
gi|332658050|gb|AEE83450.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
Length = 386
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P ++L+ V+GPR G+ +++KPGS IR+GRIVRGN++ IKD GIS+KHL IES SG W
Sbjct: 1 MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDSGNW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
IQDL S NGT LNS L P T +L + D IKLG+ T+I V + D Q++ K RN
Sbjct: 61 VIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVIDDFQEK---KLTRN 117
Query: 121 PRRQAN 126
RRQAN
Sbjct: 118 NRRQAN 123
>gi|224099895|ref|XP_002311664.1| predicted protein [Populus trichocarpa]
gi|222851484|gb|EEE89031.1| predicted protein [Populus trichocarpa]
Length = 134
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 83/104 (79%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
MEPP ++L + GPR GET+EF+PGS +RIGR+VRGN+VTIKD GISSKHL+I S SGKW
Sbjct: 1 MEPPILRLTVELGPREGETLEFRPGSTVRIGRVVRGNNVTIKDAGISSKHLVIVSESGKW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
++QDL+S NGT LNST L P FDLR+ DT KL + T+I VQ+
Sbjct: 61 SLQDLNSSNGTTLNSTVLSPYKSFDLRDGDTFKLEELTSILVQI 104
>gi|224111030|ref|XP_002315723.1| predicted protein [Populus trichocarpa]
gi|222864763|gb|EEF01894.1| predicted protein [Populus trichocarpa]
Length = 383
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 143/247 (57%), Gaps = 34/247 (13%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
MEPP +KL MVRGPR GET+EF+PGS +RIGR+VRGN+V IKD GISSKHL I S GKW
Sbjct: 1 MEPPILKLTMVRGPREGETLEFRPGSTVRIGRVVRGNNVPIKDAGISSKHLAIVSEPGKW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
++QDLDS NGT LN+TTL P FDLR+ DTIKLG+ T+I VQ + E ++ +RN
Sbjct: 61 SLQDLDSSNGTTLNTTTLSPYKSFDLRDGDTIKLGELTSILVQF----NVHEETSQLRRN 116
Query: 121 PRRQA----NVPGTSSVRATSGRKKAEAEPVETLGLEGGQIEDQSRI---NKKGRGRNKN 173
P R+A V ++ R+ G ++ ++E +S + +GRGR +
Sbjct: 117 PGRRAKESSKVGSVAANRSRRGNEEERENAENLEEENVEKLEVKSEVIVPESRGRGRPRR 176
Query: 174 LQEM--------PPQSVEVQVESK-----------ENLELEEGGEIESESKITKKGRGRS 214
+ + P ++ V + S ENL + + GE+ K + GRGR
Sbjct: 177 AKALEKELDSVVPAEAKRVNLRSTRSRKNEDCVVLENLGV-DCGEL---GKKVRGGRGRK 232
Query: 215 KDLQEMP 221
K+LQ +P
Sbjct: 233 KNLQVVP 239
>gi|449516595|ref|XP_004165332.1| PREDICTED: FHA domain-containing protein At4g14490-like [Cucumis
sativus]
Length = 159
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 12/158 (7%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSG 58
ME + LI+V+GPR GET++F PG+ IRIGRIVRGN V IKD GIS+KHL I ESVSG
Sbjct: 1 MESSSITLIIVKGPREGETLDFPPGATIRIGRIVRGNSVAIKDAGISTKHLSIESESVSG 60
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPK 118
W ++DLDS NGTF+N LPP+ F L + DTIK G+ T+I V+ ++S +E + +
Sbjct: 61 NWMLRDLDSSNGTFVNDIKLPPHDAFALHDGDTIKCGELTSIFVR---INSNEE--PRSR 115
Query: 119 RNPRRQANVPGTS-----SVRATSGRKKAEAEPVETLG 151
RNPRR+A TS SV T GR++ E +G
Sbjct: 116 RNPRRKAVEKCTSSDVVGSVAGTRGRRRKVVEEDSVVG 153
>gi|255583880|ref|XP_002532690.1| DNA binding protein, putative [Ricinus communis]
gi|223527573|gb|EEF29690.1| DNA binding protein, putative [Ricinus communis]
Length = 455
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 97/139 (69%), Gaps = 10/139 (7%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ES-VS 57
ME +KL++++GPR GE EF S ++IGR+VRGN++TIKDDGISSKHL+I ES S
Sbjct: 1 MEHQSLKLVILQGPRKGEIFEFPSKSTVKIGRVVRGNNLTIKDDGISSKHLVIGPESPSS 60
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP 117
GK +QDLDS NGT LNS+TLPP T F L + DT+KLG T+I VQ DS++ S +
Sbjct: 61 GKCIVQDLDSSNGTTLNSSTLPPFTSFVLHDGDTLKLGGETSILVQF--QDSEEPS--QL 116
Query: 118 KRNPRRQANVPGTSSVRAT 136
+R P+R+ S +RAT
Sbjct: 117 RRYPKRKVK---ESVIRAT 132
>gi|159163145|pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis
Thaliana Hypothetical Protein
Length = 118
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 77/106 (72%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P ++L+ V+GPR G+ +++KPGS IR+GRIVRGN++ IKD GIS+KHL IES SG W
Sbjct: 8 MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDSGNW 67
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
IQDL S NGT LNS L P T +L + D IKLG+ T+I V ++
Sbjct: 68 VIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVS 113
>gi|297828690|ref|XP_002882227.1| hypothetical protein ARALYDRAFT_477473 [Arabidopsis lyrata subsp.
lyrata]
gi|297328067|gb|EFH58486.1| hypothetical protein ARALYDRAFT_477473 [Arabidopsis lyrata subsp.
lyrata]
Length = 560
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP +KL +GPR+G+++ FKPGS IRIGR VRGN++ IKD GIS+KHL I S S W
Sbjct: 1 MVPPLLKLDFTQGPRAGDSLGFKPGSTIRIGRFVRGNEIAIKDAGISTKHLRIVSDSENW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAK---- 116
I DL S NGT LNS T+ P+TP +L D IKLG+ T+I V ++ Q K
Sbjct: 61 IIHDLGSSNGTILNSETIDPDTPINLSHGDEIKLGEYTSILVNFVSDVVQAPQEHKLPPR 120
Query: 117 PKRNPRRQA 125
P+RN +R A
Sbjct: 121 PRRNNKRLA 129
>gi|255564078|ref|XP_002523037.1| conserved hypothetical protein [Ricinus communis]
gi|223537720|gb|EEF39341.1| conserved hypothetical protein [Ricinus communis]
Length = 455
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 106/170 (62%), Gaps = 13/170 (7%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSG 58
ME +KL++++GP+ GET EF S ++IGR+VRGN++ IKDDGISSKHL+I ES S
Sbjct: 1 MEHQFLKLVVLQGPKKGETFEFPSKSTVKIGRVVRGNNLPIKDDGISSKHLVIGPESPSS 60
Query: 59 -KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP 117
KW +QDLDS NGT LNS LPP TPF L + DT+KLG T+I V+ + E ++
Sbjct: 61 CKWIVQDLDSSNGTSLNSLLLPPFTPFVLHDGDTLKLGAETSILVRF----QESEEPSQL 116
Query: 118 KRNPRRQANVPGTSSVRATSGRKKAEA---EPVETLGLEGGQIEDQSRIN 164
+R P+R+ S ++AT K P + L+ ++E+ ++N
Sbjct: 117 RRYPKRKVK---ESVIKATDEETKNNVRRGRPPKARVLDAKELENVEKLN 163
>gi|15232902|ref|NP_186889.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
gi|6957703|gb|AAF32447.1| hypothetical protein [Arabidopsis thaliana]
gi|332640282|gb|AEE73803.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana]
Length = 585
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP +KL +GPR+G+++ FKPGS IRIGRIVRGN++ IKD GIS+KHL I S S W
Sbjct: 1 MVPPLLKLDFTQGPRAGDSLGFKPGSTIRIGRIVRGNEIAIKDAGISTKHLRIVSDSENW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM---ITMDSQDESV-AK 116
I DL S NGT LNS T+ +TP +L D IKLG+ T+I V + Q+ + +
Sbjct: 61 IIHDLGSSNGTILNSDTIDSDTPVNLSHGDEIKLGEYTSILVNFGSDVVQAPQEHKLPPR 120
Query: 117 PKRNPRRQA 125
P+RN +R A
Sbjct: 121 PRRNNKRLA 129
>gi|10092180|gb|AAG12599.1|AC068900_5 hypothetical protein, 3' partial; 20361-22062 [Arabidopsis
thaliana]
Length = 567
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP +KL +GPR+G+++ FKPGS IRIGRIVRGN++ IKD GIS+KHL I S S W
Sbjct: 1 MVPPLLKLDFTQGPRAGDSLGFKPGSTIRIGRIVRGNEIAIKDAGISTKHLRIVSDSENW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM---ITMDSQDESV-AK 116
I DL S NGT LNS T+ +TP +L D IKLG+ T+I V + Q+ + +
Sbjct: 61 IIHDLGSSNGTILNSDTIDSDTPVNLSHGDEIKLGEYTSILVNFGSDVVQAPQEHKLPPR 120
Query: 117 PKRNPRRQA 125
P+RN +R A
Sbjct: 121 PRRNNKRLA 129
>gi|357517267|ref|XP_003628922.1| Pleiotropic drug resistance protein [Medicago truncatula]
gi|355522944|gb|AET03398.1| Pleiotropic drug resistance protein [Medicago truncatula]
Length = 817
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 79/109 (72%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
+PP + L ++ GPR+GET +F+PGS ++IGR++RGN++ IKD GIS+KHL I SG W
Sbjct: 6 DPPTLTLQILAGPRNGETHQFEPGSTVKIGRVIRGNNLPIKDPGISTKHLTIHFDSGNWI 65
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
+ DLDS NGT L++ +PPNTPF L + TIK+G+ T+I V I S+
Sbjct: 66 LTDLDSSNGTVLDNEPVPPNTPFHLCDGSTIKIGEVTSILVNFINPQSK 114
>gi|357127868|ref|XP_003565599.1| PREDICTED: uncharacterized protein LOC100837059 [Brachypodium
distachyon]
Length = 601
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 77/129 (59%), Gaps = 7/129 (5%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV----SG 58
PP + +++ +GPR+GET + GS +R+GR+V+GND+ ++D G S +HL I + +
Sbjct: 5 PPVLTVVVEKGPRAGETRHCRAGSALRVGRVVKGNDLAVRDTGASQQHLAIRFLPPPAAA 64
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP- 117
W + DL S NGTFLN L P+ P L D IK+GD T ++V M DS V P
Sbjct: 65 VWAVSDLGSSNGTFLNGAPLVPSVPAPLSHGDLIKIGDSTVLAVSMAP-DSDPNPVTNPS 123
Query: 118 -KRNPRRQA 125
+R+ RR A
Sbjct: 124 QRRSSRRTA 132
>gi|326493738|dbj|BAJ85330.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 967
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV---SGK 59
PP + L + +GPR GET + G+ +R+GR+V+GND+ ++D G S +HL+IE +
Sbjct: 5 PPMLTLAVEKGPREGETRQCSAGAALRVGRVVKGNDLAVRDGGASQQHLVIEFLPPPGAG 64
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP-- 117
W + DL S NGT LN L P+ P L D IK+GD T ++V I DS + +A P
Sbjct: 65 WAVSDLGSSNGTLLNGNPLVPSVPAPLSHGDLIKVGDSTVLAVS-IAPDSDPKPIANPTS 123
Query: 118 KRNPRRQANV 127
+R+ R+ A V
Sbjct: 124 RRSSRQTAAV 133
>gi|357142010|ref|XP_003572427.1| PREDICTED: uncharacterized protein LOC100831750 [Brachypodium
distachyon]
Length = 434
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 15/176 (8%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV----SG 58
PP + L + +GPR GET + + G+ +R+G +V GND+ ++D G S +HL IE + +
Sbjct: 5 PPVLTLTVEKGPREGETRQCRAGAALRVGLVVSGNDLAVRDAGTSQRHLAIEFLPPPPAA 64
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPK 118
+W + DL S NGT LN L P+ P L D I LG+ T ++V I DS D + A P+
Sbjct: 65 RWAVSDLGSSNGTLLNGAPLVPSVPAPLSHGDLISLGESTVLAVS-IASDS-DMNPAGPR 122
Query: 119 RNPRRQA------NVPGTSSVRATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGR 168
R+ R A P + R + + AEP E + E IE+ + + + GR
Sbjct: 123 RSSRLAAAGVAAEERPIPAVTRRSKQKNAVAAEPPEAVKEE---IEEAAEVMQHGR 175
>gi|115455093|ref|NP_001051147.1| Os03g0728500 [Oryza sativa Japonica Group]
gi|50428710|gb|AAT77061.1| putative FHA domain protein [Oryza sativa Japonica Group]
gi|108710876|gb|ABF98671.1| FHA domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549618|dbj|BAF13061.1| Os03g0728500 [Oryza sativa Japonica Group]
gi|125587788|gb|EAZ28452.1| hypothetical protein OsJ_12434 [Oryza sativa Japonica Group]
Length = 472
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV---SGK 59
PP + L + +G R GET +++ G+ +R+GR+ GND+ ++D G S +HL IE + + +
Sbjct: 6 PPVLTLQVKKGRRGGETRQWRAGAVLRVGRVATGNDIAVRDAGASQRHLSIEFLPPPASR 65
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
W + D+ S NGT LN + L P P L + D IK+G+ + + V I DS P+R
Sbjct: 66 WAVSDVGSSNGTLLNGSPLVPTVPSPLSDGDVIKIGESSMLVVS-IAPDSDPNP--GPRR 122
Query: 120 NPRRQANVPG 129
+ R+ A V G
Sbjct: 123 SSRQSAAVVG 132
>gi|125544732|gb|EAY90871.1| hypothetical protein OsI_12478 [Oryza sativa Indica Group]
Length = 472
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV---SGK 59
PP + L + +G R GET +++ G+ +R+GR+ GND+ ++D G S +HL IE + + +
Sbjct: 6 PPVLTLQVKKGRRGGETRQWRAGAVLRVGRVATGNDIAVRDAGASQRHLSIEFLPPPASR 65
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
W + D+ S NGT LN + L P P L + D IK+G+ + + V I DS P+R
Sbjct: 66 WAVSDVGSSNGTLLNGSPLVPTVPSPLSDGDVIKIGESSMLVVS-IAPDSDPNP--GPRR 122
Query: 120 NPRRQANVPG 129
+ R+ A V G
Sbjct: 123 SSRQSAAVVG 132
>gi|414872605|tpg|DAA51162.1| TPA: hypothetical protein ZEAMMB73_112088 [Zea mays]
Length = 522
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESV---SG 58
PP + L++ +GP G T++ G++ +R+GR+ +GND+++ D G S +HL +E + +
Sbjct: 5 PPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLPPPAA 64
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+WT+ DL S NGT LN+T L P L + D IK+G+ T ++V + T
Sbjct: 65 RWTVTDLGSSNGTLLNATPLVATIPAPLSDGDLIKIGETTVLAVSIST 112
>gi|226504770|ref|NP_001147531.1| kinetoplast-associated protein [Zea mays]
gi|195612016|gb|ACG27838.1| kinetoplast-associated protein [Zea mays]
Length = 529
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESV---SG 58
PP + L++ +GP G+T++ + G+ +R+GR+ +GND+++ D G S +HL ++ + +
Sbjct: 5 PPVLTLLVKKGPCEGKTVQRRAGATALRVGRVAKGNDLSVGDAGASQRHLSVKFLPPPAA 64
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+W++ DL S NGT LN T L P L + D IK+G+ T ++V + T
Sbjct: 65 RWSVTDLCSSNGTLLNGTPLVATIPAPLSDGDLIKIGEATVLAVSIST 112
>gi|242087029|ref|XP_002439347.1| hypothetical protein SORBIDRAFT_09g004900 [Sorghum bicolor]
gi|241944632|gb|EES17777.1| hypothetical protein SORBIDRAFT_09g004900 [Sorghum bicolor]
Length = 545
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 49/258 (18%)
Query: 2 EPPG-MKLIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESV--- 56
+PP + L++ +GP G ++ + G+ +R+GR+ +GND++++D G S +HL +E +
Sbjct: 3 DPPSVLTLLVKKGPCEGRALQRRAGAAALRVGRVAKGNDLSVRDAGASQRHLSVEFLPPP 62
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDS------- 109
+ +W DL S NGT LN T L P P L + D IK+G+ T I+V I++D+
Sbjct: 63 AARWAATDLGSSNGTLLNGTPLVPTVPAPLSDGDLIKIGESTVIAVS-ISIDAGPGPGPA 121
Query: 110 ------------------QDESVAKPKRNPRRQANVP----GTSSVRATS------GRKK 141
+D+ A +R RR+A G + V + GRKK
Sbjct: 122 ATRRSARNAAAVAAAPEEEDQGPAVSRRAGRRKAGAAEAPEGGNEVEEAALPTRRGGRKK 181
Query: 142 AEAEPVETLGLEGG---QIEDQSRINKKGRGRNKNLQ-EMPPQSVEVQVESKENLELEEG 197
A VE G+E G + E+++ I ++GR R +PPQ + E
Sbjct: 182 A----VEPAGVEMGAEKEEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSARATARRGEAV 237
Query: 198 GEIESESKITKKGRGRSK 215
G E K+ GRGR +
Sbjct: 238 GCQNDEGKVVGTGRGRGR 255
>gi|413933157|gb|AFW67708.1| kinetoplast-associated protein [Zea mays]
Length = 527
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESV---SG 58
PP + L++ +GP G+T+ + G+ +R+GR+ +GND+++ D G S +HL ++ + +
Sbjct: 5 PPVLTLLVKKGPCEGKTVHRRAGATALRVGRVAKGNDLSVGDAGASQRHLSVKFLPPPAA 64
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+W++ DL S NGT LN T L P L + D IK+G+ T ++V + T
Sbjct: 65 RWSVTDLCSSNGTLLNGTPLVATIPAPLSDGDLIKIGEATVLAVSIST 112
>gi|242033085|ref|XP_002463937.1| hypothetical protein SORBIDRAFT_01g009230 [Sorghum bicolor]
gi|241917791|gb|EER90935.1| hypothetical protein SORBIDRAFT_01g009230 [Sorghum bicolor]
Length = 581
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
Query: 1 MEPPG-MKLIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESV-- 56
++PP + L++ +GP G+T++ + G+ +R+GR+ +GN + + D G S +H +E +
Sbjct: 2 VDPPSVLTLLVKKGPCEGKTLQRRAGAAALRVGRVAKGNHLPVGDAGASQRHFSVEFLPP 61
Query: 57 -SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+ +W + DL S NGT LN T L P L + D IK+G+ T ++V + T
Sbjct: 62 PAARWAVTDLGSSNGTLLNGTPLVATIPAPLSDGDLIKIGETTVLAVSIST 112
>gi|168066534|ref|XP_001785191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663224|gb|EDQ50001.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 96
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+ L++ RGP G+T + ++ IGR + ND IKD +S KH +IE W + D+
Sbjct: 1 LSLLIERGPGEGKTFDATQLKRVTIGR-TQANDYPIKDPTVSRKHAVIEWRVDHWALVDV 59
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
S NGTF+N L + P L+ D I++G+ T I V
Sbjct: 60 GSSNGTFVNRKVLVNDHPVRLQNGDLIRIGESTKIRV 96
>gi|357464135|ref|XP_003602349.1| FHA domain-containing protein [Medicago truncatula]
gi|355491397|gb|AES72600.1| FHA domain-containing protein [Medicago truncatula]
Length = 433
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 45 GISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
GIS+KHL I S W + LDS NGT L++ +PPNTPF L TIK+G+ T+I V
Sbjct: 21 GISTKHLTIHFDSSCNWILTYLDSSNGTVLDNKPVPPNTPFHLTYASTIKIGEVTSIRVN 80
Query: 104 MITMDSQDESVAKPKRNPRRQANVPGTSSV 133
I Q V RN R + V ++ V
Sbjct: 81 FINYRPQPMKVT---RNTRSRNVVSDSTHV 107
>gi|442322048|ref|YP_007362069.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441489690|gb|AGC46385.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 580
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L+ V GP+SGE + + G + IGR N + I D +S KH+++ G WT+ DL
Sbjct: 44 RLVCVAGPKSGEEFQLEDGEYV-IGRAT-DNPICIPDTSVSRKHVMVRKSGGGWTVSDLG 101
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
S NGT +N + TP L D I LGD
Sbjct: 102 SGNGTLVNGDAIGDETP--LANGDVITLGD 129
>gi|307106278|gb|EFN54524.1| hypothetical protein CHLNCDRAFT_135265 [Chlorella variabilis]
Length = 134
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P ++L M+ GP++G+ +E + G+ +R+GR + + + IKD IS +H + G W +
Sbjct: 7 PALLRLHMLEGPQTGKQLENR-GASLRVGRTTK-SALYIKDPTISEQHAEVVWQQGAWQL 64
Query: 63 QDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCTTISVQMITMDS 109
+DL S NGT LN L P L++ D IK G T V+++ + S
Sbjct: 65 RDLGSTNGTVLNGKALAGEPLAFVALKDGDLIKFGTDTLARVEIVAVPS 113
>gi|269124344|ref|YP_003297714.1| FHA domain containing protein [Thermomonospora curvata DSM 43183]
gi|268309302|gb|ACY95676.1| FHA domain containing protein [Thermomonospora curvata DSM 43183]
Length = 166
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTI--KDDGISSKHLIIESVSGKWTIQD 64
+L++ +G R+G T+E PG I IGR ND TI DD SS+H + + +G+W ++D
Sbjct: 73 RLVVTQGDRAGLTMELSPGVPITIGR---ANDATIVVADDYASSRHARLYAQNGQWIVED 129
Query: 65 LDSCNGTFL------NSTTLPPNTPFDL 86
L S NGT+L T +PP P +
Sbjct: 130 LGSTNGTYLGRNRVNQPTPVPPGVPIRI 157
>gi|412992623|emb|CCO18603.1| predicted protein [Bathycoccus prasinos]
Length = 387
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 3 PPG---------MKLIMVRGPRSGETIEFKPGS--KIRIGRIVRGNDVTIKDDGISSK-- 49
PPG + L V+GP G E P + ++IGR+ GN + +KDD +S K
Sbjct: 104 PPGDPRERPKETIALEFVKGPFKGTRFE-NPNNLPSLKIGRVKPGNQIHVKDDAVSQKHA 162
Query: 50 HLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT-PFDLRENDTIKLGDCTTISVQM 104
H+ + + +W I DL S NGT+++ L ++ L++ TIK+G+ TT+ ++
Sbjct: 163 HIFWNASTNRWEIVDLGSSNGTYVDDVELDEHSEARALKDGSTIKIGNQTTVRARI 218
>gi|159473998|ref|XP_001695116.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276050|gb|EDP01824.1| predicted protein [Chlamydomonas reinhardtii]
Length = 184
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 3 PPGMKLIMVRGPRSGETIEFK--PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
P +KLI+ GP G+ + + +GR + + +KDD IS KH W
Sbjct: 17 PTRLKLIVTEGPCEGQIFDAAEMDACFLTLGR-TKKTKIHLKDDSISEKHAEFAWTGSHW 75
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
T+ D S NGT +N L PN P L+ + + LGD T ++V++
Sbjct: 76 TVTDTCSSNGTRVNGAKLKPNEPHVLKAGEHVALGDETIMTVEL 119
>gi|156742509|ref|YP_001432638.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233837|gb|ABU58620.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 247
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ +G+S +H I+ G+WT+ DL S NGTF+N T L P+TP L E ++LG
Sbjct: 177 RANGVSRRHAILRYAGGQWTLTDLGSANGTFVNDTMLMPHTPTVLPEGSVVRLG 230
>gi|152989942|ref|YP_001355664.1| hypothetical protein NIS_0193 [Nitratiruptor sp. SB155-2]
gi|151421803|dbj|BAF69307.1| hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 1007
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 41 IKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
D GIS KH I + +G+W IQDL+S NGT+LN L PN + L++ND + L
Sbjct: 69 FTDKGISRKHAKIFNENGQWYIQDLNSTNGTYLNGQKLIPNKKYPLQQNDILSLAQKIFF 128
Query: 101 SVQM 104
+VQ
Sbjct: 129 TVQF 132
>gi|148656938|ref|YP_001277143.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148569048|gb|ABQ91193.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 247
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ G+S +H ++ SG+WTI DL S NGTF+N L P TP L + ++LG
Sbjct: 177 RSSGVSRRHALLRYASGQWTITDLGSANGTFVNDAALTPQTPVALPDGAVVRLG 230
>gi|338535861|ref|YP_004669195.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337261957|gb|AEI68117.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 555
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+LI + GP+ GE + IGR N + I D +S KH+++ V G W + DL
Sbjct: 18 RLICIAGPKDGEEFALSEEEYV-IGRAT-DNVICIPDTSVSRKHVMVRKVGGGWAVSDLG 75
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
S NGT +N + TP L D I LGD
Sbjct: 76 SGNGTLINGDVISDETP--LANGDVITLGD 103
>gi|321479359|gb|EFX90315.1| hypothetical protein DAPPUDRAFT_309786 [Daphnia pulex]
Length = 1738
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 15 RSGETIEFKPGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
R I P K+ IGR G D+ +S +H +++ V W+I+DL S NG FL
Sbjct: 15 RHHLNILLGPREKLTIGRKAGGVVDIVCNGKTVSREHCVLKYVDSCWSIEDLKSMNGVFL 74
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN--PRRQANVPGTS 131
N +P NTP LRE D + +G T + +V N VP S
Sbjct: 75 NKNRIPANTPTILRERDILGVGAIETTEPDYYVFNVLKNTVKDENENDGDLMIVEVPSVS 134
Query: 132 SVRATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGRGRN 171
+ R + +P+ +E G+ D ++ RG+N
Sbjct: 135 AARDPLEESECRTDPLSN-DIEKGKPSDDPDKSETPRGQN 173
>gi|56965244|ref|YP_176976.1| hypothetical protein ABC3482 [Bacillus clausii KSM-K16]
gi|56911488|dbj|BAD66015.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 228
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M+ +++I +G SGE + F G ++ IGR D+ D IS KH +IE G +
Sbjct: 1 MQKTAIQIIKGQGFPSGEQL-FVRGGRMLIGRAGPSVDIGFADPYISRKHALIEEKDGDY 59
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
TI DL+S +G +N ++P PF L +D+I L
Sbjct: 60 TITDLNSKHGVEVNRLSIPAGKPFPLHHSDSITLA 94
>gi|406911515|gb|EKD51292.1| FHA protein [uncultured bacterium]
Length = 770
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KLI+ GP G+ + G +GR ND+ + D +S +H I G W I+D
Sbjct: 7 KLIITTGPEEGKEFDLSTGESFLVGR-SDENDIILDDSSLSRRHASIHQKEGVWFIRDEG 65
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQAN 126
S NGT +NST L P L D I+LG ++ T ++ V K P +A
Sbjct: 66 SRNGTIVNSTALTPAMTTPLTHLDVIRLG---IYEMRFATQSFTNDEVKNFK--PAEKAV 120
Query: 127 VPGTSSVR--ATSGRKKAEAEP 146
P T AT+ K ++EP
Sbjct: 121 TPPTLPTNEIATNKNSKNQSEP 142
>gi|313888268|ref|ZP_07821939.1| FHA domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845671|gb|EFR33061.1| FHA domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 112
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I +GR R NDV IKD +S HL+I + ++ ++DL S NGTFLN + PN +L+
Sbjct: 36 ISLGRSSR-NDVVIKDKFVSKNHLLIREKNQRYYLEDLGSANGTFLNGVKIDPNELIELQ 94
Query: 88 ENDTIKLG 95
ND I +G
Sbjct: 95 NNDKIGVG 102
>gi|168005365|ref|XP_001755381.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693509|gb|EDQ79861.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 96
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+ L M RGP G++ +I IGR R N+ IKD +S KH IE W I D+
Sbjct: 1 LTLCMERGPGEGKSFLATHLKRITIGR-TRTNNYPIKDPTVSQKHAFIEWQVDHWVIVDI 59
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
S NGT +N L P L+ D I++G+ I V
Sbjct: 60 GSSNGTDVNGHILVEQQPMRLQNGDLIRVGEAIKIRV 96
>gi|357392355|ref|YP_004907196.1| hypothetical protein KSE_54650 [Kitasatospora setae KM-6054]
gi|311898832|dbj|BAJ31240.1| hypothetical protein KSE_54650 [Kitasatospora setae KM-6054]
Length = 488
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 27 KIRIGRIV--RGN------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNST- 76
++RIGR RG V+ +D G S H L+ E G W + D DS NGT +N +
Sbjct: 399 QLRIGRRSQQRGTVPEIDLSVSPEDPGASHHHALLAEQPDGSWVVVDQDSTNGTTMNGSP 458
Query: 77 -TLPPNTPFDLRENDTIKLGDCTTISVQM 104
TLPP+T L + D I +G TTI+V +
Sbjct: 459 DTLPPHTAIPLNDGDRIHVGAWTTITVHL 487
>gi|168698082|ref|ZP_02730359.1| ornithine decarboxylase inhibitor-putative sigma54 transciptional
regulator [Gemmata obscuriglobus UQM 2246]
Length = 643
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
+PP L+ R G+ G++ ++GR N V ++DD S +H + + G W
Sbjct: 3 QPPDAFLVARRDDGFGDVFPLHEGTRYKLGR-APTNRVVLRDDLCSREHAEVFAAEGGWF 61
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNP 121
++DL S NGT LN L + P LR D ++LG + + +D + P+ P
Sbjct: 62 VRDLGSLNGTHLNGELLRSDRP--LRPQDELRLG-----RTRFVFVDEMSQLPDPPQVAP 114
Query: 122 RRQANVPGTSSVRATSGRKKAEAEPVET 149
+V G +R G+ + + +P T
Sbjct: 115 APAEHVDGL-EIRKRLGQTRYQQQPSTT 141
>gi|384246464|gb|EIE19954.1| SMAD/FHA domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 160
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P + L GP G K G + +GR R + + IKD +S KH + G W +
Sbjct: 11 PAALTLRATAGPCEGTNYS-KAGPLLTVGR-TRASKLHIKDSAVSEKHAELRWEGGHWNL 68
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
D+ S NGT +N L L++ D I G + ++V++I + +V + R+
Sbjct: 69 TDVGSSNGTAVNGKKLAEGIALRLKDGDIILFGSDSLLTVELIPAFREHTTVEQHLRS 126
>gi|405974898|gb|EKC39510.1| E3 ubiquitin-protein ligase RNF8 [Crassostrea gigas]
Length = 607
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 20 IEFKPGSKIRIGRIVRGNDVT--IKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
I+F+ ++ IGR D T I IS H +++ W I+D S NG F+N
Sbjct: 23 IDFRGRDEVTIGR---SQDATFCILSTMISRCHAVLKKEGAVWNIKDNKSLNGVFVNGKK 79
Query: 78 LPPNTPFDLRENDTIKLG 95
L P+TP L ENDTI+ G
Sbjct: 80 LEPHTPCTLHENDTIQFG 97
>gi|283781361|ref|YP_003372116.1| Fis family transcriptional regulator [Pirellula staleyi DSM 6068]
gi|283439814|gb|ADB18256.1| transcriptional regulator, NifA subfamily, Fis Family [Pirellula
staleyi DSM 6068]
Length = 677
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ G + + PG + +GR N + +KDD S H+ I G+WT++DLDS
Sbjct: 5 LVIREGSKWTDVFRLVPGRTVTVGR-ASTNQIVVKDDRASRNHVEIFLTRGQWTLRDLDS 63
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
NGTF+ + + ++L + I++ C V
Sbjct: 64 RNGTFVGDKQIRGD--YELSPGEVIRIASCQLAYVH 97
>gi|405355630|ref|ZP_11024805.1| hypothetical protein A176_0939 [Chondromyces apiculatus DSM 436]
gi|397091337|gb|EJJ22155.1| hypothetical protein A176_0939 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 754
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 33 IVRGNDVTIK--DDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
I RG+DVT++ D G+S KH I+ G + DLDS NGT LN P + +L E
Sbjct: 50 IGRGSDVTVRIDDHGVSRKHARIVRGSDGSCHVTDLDSTNGTLLNGV---PVSSAELMEG 106
Query: 90 DTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVP---GTSSVRATSGRKKAEAEP 146
D +++G +V + +D V +P+ RQA G ATSGR +
Sbjct: 107 DRLQIG-----TVTVFRFSKRD--VLEPREEQLRQALTAARVGIWDWNATSGRVTWSEQV 159
Query: 147 VETLGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENLELEEGGEIESESKI 206
LGL G++ GR L E+ + +V LE+ +++ E +I
Sbjct: 160 DRLLGLPVGKLS----------GRAMELSEVVHPADLPRVSDVLGAALEKKTQVDVEYRI 209
Query: 207 TKKGRG 212
+G G
Sbjct: 210 EPQGSG 215
>gi|333891686|ref|YP_004465561.1| forkhead-associated protein [Alteromonas sp. SN2]
gi|332991704|gb|AEF01759.1| Forkhead-associated protein [Alteromonas sp. SN2]
Length = 498
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I IGR + + I G+S +HL + + K I+DL S NGT +N L PNT +L+
Sbjct: 420 ILIGRSAQKANYVINVPGVSREHLNVILIDNKVMIEDLSSVNGTAINDKDLAPNTKAELK 479
Query: 88 ENDTIKLGDCTTISVQMI 105
DT+++G T SV +
Sbjct: 480 NGDTLRIG-TVTFSVHFL 496
>gi|145351046|ref|XP_001419898.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580131|gb|ABO98191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 264
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG-ISSKHLIIESVSGK--WTI 62
M L+++ GP +G E + + IGR RGN V IK DG +S H + + WTI
Sbjct: 1 MTLVVITGPCAGREFELRRDGESAIGRTKRGNAVWIKGDGAVSQSHATCRWCAKREAWTI 60
Query: 63 QDLDSCNGTFLNSTTLPPNTP-FDLRENDTIKLGDCTTISVQMITMDSQDES 113
D S NGT ++ + LR+ IKLG TT+ + D + E+
Sbjct: 61 SDAGSSNGTEVDGKDVEEGGEGATLRDGSVIKLGTETTVVCRTRAADERGEA 112
>gi|108763994|ref|YP_632814.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467874|gb|ABF93059.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 581
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
LI + GP+ GE + IGR N + I D +S KH+++ W + DL S
Sbjct: 47 LICIAGPKDGEEFALSEEEYV-IGRAT-DNAICIPDTSVSRKHVMVRKSGAGWAVSDLGS 104
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
NGT +N + TP L D I LGD
Sbjct: 105 GNGTLINGDVVNEETP--LANGDVITLGD 131
>gi|291302017|ref|YP_003513295.1| FHA domain-containing protein [Stackebrandtia nassauensis DSM
44728]
gi|290571237|gb|ADD44202.1| FHA domain containing protein [Stackebrandtia nassauensis DSM
44728]
Length = 233
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST--TLPPNTPFDLRENDTIKLGDCTT 99
+D G+S H I + G+W + D+ S NGT+LN +P NTP L D I LG TT
Sbjct: 168 EDSGVSHAHAAIINAEGRWCVVDVGSSNGTYLNMAPEPIPANTPTLLNHGDRIHLGAWTT 227
Query: 100 ISVQM 104
++V
Sbjct: 228 LTVSF 232
>gi|256389266|ref|YP_003110830.1| FHA domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256355492|gb|ACU68989.1| FHA domain containing protein [Catenulispora acidiphila DSM 44928]
Length = 175
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWT 61
P +L++V G +G T+ G ++ +GR + + + DD SS+H + SG+W
Sbjct: 77 PAPTRLVVVGGSLAGTTVNITSGQQVTMGR-AHDSTIVLDDDYASSRHARLYPDASGQWI 135
Query: 62 IQDLDSCNGTFLNSTTLPPNTP 83
++DL S NGTFL T L N P
Sbjct: 136 VEDLGSTNGTFLGQTKL--NAP 155
>gi|83589759|ref|YP_429768.1| FHA domain-containing protein [Moorella thermoacetica ATCC 39073]
gi|83572673|gb|ABC19225.1| FHA domain containing protein [Moorella thermoacetica ATCC 39073]
Length = 162
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
G + GE+ + G I IGR ND+ I D +S++H +I +W I DLDS NGT+
Sbjct: 61 GAKRGES--YPLGENISIGR-DNHNDIIINDSHVSARHAVITRQGREWKILDLDSTNGTY 117
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCT 98
+N L P LR D I +G T
Sbjct: 118 VNGLRL--TGPHSLRPGDKISIGGVT 141
>gi|22298872|ref|NP_682119.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
gi|22295053|dbj|BAC08881.1| ABC transporter ATP-binding protein [Thermosynechococcus elongatus
BP-1]
Length = 1009
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 27 KIRIGR--IVRGND----VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+I++GR ++ G D V + +GIS H +I + + + DL S +GTFLN T L P
Sbjct: 33 QIQLGRDRLIIGTDPQSQVILVGEGISRHHALILATETGYQVVDLGSASGTFLNGTKLQP 92
Query: 81 NTPFDLRENDTIKLGDCTTI 100
TP L+ D +K+GD I
Sbjct: 93 RTPVVLKAGDRLKIGDFEAI 112
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
++RIGR ND+ + +S H + G+W + DL+S NGTF+N+ L P P L
Sbjct: 247 QVRIGR-DPSNDMVLDHPVVSRFHARLYLQEGQWYLVDLESANGTFVNNRRLEPRKPVVL 305
Query: 87 RENDTIKLGDCTTI 100
+++G +++
Sbjct: 306 PTGALVRIGPYSSV 319
>gi|421737720|ref|ZP_16176236.1| hypothetical protein B217_10091, partial [Bifidobacterium bifidum
IPLA 20015]
gi|407294992|gb|EKF14858.1| hypothetical protein B217_10091, partial [Bifidobacterium bifidum
IPLA 20015]
Length = 119
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP++G ++ I +GR N V + D+ +SS H I + SG+W I+DL
Sbjct: 27 LVIIDGPKAGASVPLT-SESITLGR-AASNTVVLDDEFVSSHHARIYKDPASGQWAIEDL 84
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 85 GSTNGTIVNQQRL--NMPMLLPPRMPVRIGATT 115
>gi|392548912|ref|ZP_10296049.1| FHA domain-containing protein [Pseudoalteromonas rubra ATCC 29570]
Length = 333
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 29 RIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
R GR+ D + IS H +IE G W ++DL S NGT+LN +P N L
Sbjct: 20 RFGRLKHSVDSCFDELAISRIHAVIEWQQGYWFLRDL-SRNGTWLNDVRVPYNQDVALNI 78
Query: 89 NDTIKLGD--CTTISV 102
ND I+ D C + SV
Sbjct: 79 NDEIRFSDSSCHSFSV 94
>gi|449496667|ref|XP_004176455.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Taeniopygia guttata]
Length = 523
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIE-SV 56
P + + R SG+ + + G+++ +GR G D+T + IS KH + + +
Sbjct: 7 PCLAWCLRRVGASGDWLLLEAGTQVTVGR---GLDITYQLVSKTCPLMISRKHCVFQQNA 63
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WT++D S NG +LN L P+ + + E D I+LG
Sbjct: 64 EGQWTVKDNKSLNGVWLNKQRLDPSKVYPIAEGDRIELG 102
>gi|261409963|ref|YP_003246204.1| transcriptional regulator CadC [Paenibacillus sp. Y412MC10]
gi|261286426|gb|ACX68397.1| transcriptional regulator, CadC [Paenibacillus sp. Y412MC10]
Length = 229
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL-GD 96
D+ + +S +H + +GK++I+DL+S +GTF+N L P+ L+ DTI L GD
Sbjct: 40 DIAFDNIFVSRRHAALLHRNGKFSIKDLNSKHGTFVNQARLAPHDEIPLQHGDTIVLAGD 99
Query: 97 CTTISVQMITMD 108
+S +++MD
Sbjct: 100 LIVLSFSILSMD 111
>gi|329924665|ref|ZP_08279680.1| FHA domain protein [Paenibacillus sp. HGF5]
gi|328940499|gb|EGG36821.1| FHA domain protein [Paenibacillus sp. HGF5]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL-GD 96
D+ + +S +H + +GK++I+DL+S +GTF+N L P+ L+ DTI L GD
Sbjct: 41 DIAFDNIFVSRRHAALLHRNGKFSIKDLNSKHGTFVNQARLAPHDEIPLQHGDTIVLAGD 100
Query: 97 CTTISVQMITMD 108
+S +++MD
Sbjct: 101 LIVLSFSILSMD 112
>gi|392550911|ref|ZP_10298048.1| FHA domain-containing protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR I++ +S H +IE G W +QD+ S NGT++N + N DL+ N
Sbjct: 21 IGRHPETAHTLIRETSVSRSHCLIEWQQGNWFLQDI-SANGTYINGKRVAKNIKHDLKVN 79
Query: 90 DTIKLGDCTTISVQMITMD-------SQDESVAKPKRNPR 122
D ++ GD ++ Q+ +++ S +ESV+ N
Sbjct: 80 DVVQFGDSESVKWQVSSLEQPCPFLKSTNESVSDFALNHH 119
>gi|423062358|ref|ZP_17051148.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunit [Arthrospira platensis C1]
gi|406716266|gb|EKD11417.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunit [Arthrospira platensis C1]
Length = 919
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N V + D +S H I+ ++ I DL S GT LN+ T+PP TP L NDTI++GD
Sbjct: 36 NTVVLTDMSVSRHHAEIKLEGDRYVIVDLGSTIGTLLNADTIPPKTPQPLANNDTIQIGD 95
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRRQA-NVPGTSSVRATSGRKKAEAEPVETLGLEGG 155
T ++ ++ A P R+ + N G SS S + + + T+G +G
Sbjct: 96 -TKLTFCFSSLAVAPTQAAAPARSEKTVIDNTIGQSSGTVLSFTLELRGKDLITIGRDG- 153
Query: 156 QIEDQSRINKKGRGRNK 172
+ + IN R+
Sbjct: 154 --SNHTVINHPSVSRHH 168
>gi|209522952|ref|ZP_03271509.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Arthrospira maxima CS-328]
gi|209496539|gb|EDZ96837.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Arthrospira maxima CS-328]
Length = 919
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N V + D +S H I+ ++ I DL S GT LN+ T+PP TP L NDTI++GD
Sbjct: 36 NTVVLTDMSVSRHHAEIKLEGDRYVIVDLGSTIGTLLNADTIPPKTPQPLANNDTIQIGD 95
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRRQA-NVPGTSSVRATSGRKKAEAEPVETLGLEGG 155
T ++ ++ A P R+ + N G SS S + + + T+G +G
Sbjct: 96 -TKLTFCFSSLAVAPTQAAAPARSEKTVIDNTIGQSSGTVLSFTLELRGKDLITIGRDG- 153
Query: 156 QIEDQSRINKKGRGRNK 172
+ + IN R+
Sbjct: 154 --SNHTVINHPSVSRHH 168
>gi|376001787|ref|ZP_09779641.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Arthrospira sp. PCC 8005]
gi|375329698|emb|CCE15394.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Arthrospira sp. PCC 8005]
Length = 919
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N V + D +S H I+ ++ I DL S GT LN+ T+PP TP L NDTI++GD
Sbjct: 36 NTVVLTDMSVSRHHAEIKLEGDRYVIVDLGSTIGTLLNADTIPPKTPQPLANNDTIQIGD 95
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRRQA-NVPGTSSVRATSGRKKAEAEPVETLGLEGG 155
T ++ ++ A P R+ + N G SS S + + + T+G +G
Sbjct: 96 -TKLTFCFSSLAVAPTQAAAPARSEKTVIDNTIGQSSGTVLSFTLELRGKDLITIGRDG- 153
Query: 156 QIEDQSRINKKGRGRNK 172
+ + IN R+
Sbjct: 154 --SNHTVINHPSVSRHH 168
>gi|357124683|ref|XP_003564027.1| PREDICTED: protein phosphatase 2C 70-like [Brachypodium distachyon]
Length = 566
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGS----KIRIGRIVRGNDVTIKDDGISSKHLIIESVSG--K 59
+ L ++ GP G + G+ + +GR+ + ND+ +KD+ +S KH I+ + K
Sbjct: 167 LALEVIAGPSHGINRYLQSGNTSMLSMTLGRVPQ-NDLILKDNEVSGKHARIDWNANTLK 225
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGTFLNS ++ P+ P +L + D I LG + ISVQ+
Sbjct: 226 WQLVDMGSLNGTFLNSQSINHPDVGSRRWGEPAELADGDIITLGSSSKISVQI 278
>gi|414583785|ref|ZP_11440925.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-1215]
gi|420884895|ref|ZP_15348255.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0421]
gi|420891139|ref|ZP_15354486.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0422]
gi|420896565|ref|ZP_15359904.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0708]
gi|420901923|ref|ZP_15365254.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0817]
gi|420905134|ref|ZP_15368452.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-1212]
gi|392078399|gb|EIU04226.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0422]
gi|392080658|gb|EIU06484.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0421]
gi|392095877|gb|EIU21672.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0708]
gi|392099284|gb|EIU25078.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0817]
gi|392103038|gb|EIU28824.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-1212]
gi|392118937|gb|EIU44705.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-1215]
Length = 861
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 19 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 75
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 76 -GWVEVRDDTVINLGD 90
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ SG IQDL + NGTF+N + ++
Sbjct: 230 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTSGGLEIQDLHTINGTFVNGVQVEQSS- 286
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 287 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 315
>gi|420880608|ref|ZP_15343975.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0304]
gi|420973638|ref|ZP_15436829.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0921]
gi|392085517|gb|EIU11342.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0304]
gi|392161521|gb|EIU87211.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 5S-0921]
Length = 851
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 9 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 65
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 66 -GWVEVRDDTVINLGD 80
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ SG IQDL + NGTF+N + ++
Sbjct: 220 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTSGGLEIQDLHTINGTFVNGVQVEQSS- 276
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 277 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 305
>gi|420874423|ref|ZP_15337799.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0726-RB]
gi|420911331|ref|ZP_15374643.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0125-R]
gi|420917788|ref|ZP_15381091.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0125-S]
gi|420922952|ref|ZP_15386248.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0728-S]
gi|420928612|ref|ZP_15391892.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-1108]
gi|420968221|ref|ZP_15431425.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0810-R]
gi|420978953|ref|ZP_15442130.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0212]
gi|420984337|ref|ZP_15447504.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0728-R]
gi|420990150|ref|ZP_15453306.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0206]
gi|421008504|ref|ZP_15471614.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0119-R]
gi|421014388|ref|ZP_15477464.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0122-R]
gi|421019251|ref|ZP_15482308.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0122-S]
gi|421025011|ref|ZP_15488055.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0731]
gi|421030247|ref|ZP_15493278.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0930-R]
gi|421035717|ref|ZP_15498735.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0930-S]
gi|421041904|ref|ZP_15504912.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0116-R]
gi|421044776|ref|ZP_15507776.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0116-S]
gi|392065898|gb|EIT91746.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0726-RB]
gi|392110679|gb|EIU36449.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0125-S]
gi|392113325|gb|EIU39094.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0125-R]
gi|392127605|gb|EIU53355.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0728-S]
gi|392129730|gb|EIU55477.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-1108]
gi|392163231|gb|EIU88920.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0212]
gi|392169333|gb|EIU95011.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 6G-0728-R]
gi|392184429|gb|EIV10080.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0206]
gi|392196652|gb|EIV22268.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0119-R]
gi|392198665|gb|EIV24276.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0122-R]
gi|392207881|gb|EIV33458.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0122-S]
gi|392211808|gb|EIV37374.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0731]
gi|392222832|gb|EIV48355.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0116-R]
gi|392223467|gb|EIV48989.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0930-R]
gi|392224212|gb|EIV49733.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0930-S]
gi|392234229|gb|EIV59727.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0116-S]
gi|392250728|gb|EIV76202.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 3A-0810-R]
Length = 851
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 9 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 65
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 66 -GWVEVRDDTVINLGD 80
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ G IQDL + NGTF+N + ++
Sbjct: 220 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTPGGLEIQDLHTINGTFVNGVQVEQSS- 276
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 277 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 305
>gi|397680238|ref|YP_006521773.1| Nod factor export ATP-binding protein I [Mycobacterium
massiliense str. GO 06]
gi|420932935|ref|ZP_15396210.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-151-0930]
gi|420953344|ref|ZP_15416586.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0626]
gi|420957519|ref|ZP_15420753.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0107]
gi|420964209|ref|ZP_15427433.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-1231]
gi|420999238|ref|ZP_15462373.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0912-R]
gi|421003760|ref|ZP_15466882.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0912-S]
gi|392137694|gb|EIU63431.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-151-0930]
gi|392152257|gb|EIU77964.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0626]
gi|392178020|gb|EIV03673.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0912-R]
gi|392192463|gb|EIV18087.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0912-S]
gi|392247122|gb|EIV72599.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-1231]
gi|392247245|gb|EIV72721.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0107]
gi|395458503|gb|AFN64166.1| Nod factor export ATP-binding protein I [Mycobacterium
massiliense str. GO 06]
Length = 861
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 19 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 75
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 76 -GWVEVRDDTVINLGD 90
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ SG IQDL + NGTF+N + ++
Sbjct: 230 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTSGGLEIQDLHTINGTFVNGVQVEQSS- 286
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 287 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 315
>gi|365871619|ref|ZP_09411160.1| ABC transporter ATP-binding protein [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|418247150|ref|ZP_12873536.1| ABC transporter ATP-binding protein [Mycobacterium abscessus
47J26]
gi|420939497|ref|ZP_15402766.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-152-0914]
gi|420943195|ref|ZP_15406451.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-153-0915]
gi|420948711|ref|ZP_15411961.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-154-0310]
gi|420993463|ref|ZP_15456609.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0307]
gi|421050704|ref|ZP_15513698.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense CCUG 48898 = JCM 15300]
gi|353451643|gb|EHC00037.1| ABC transporter ATP-binding protein [Mycobacterium abscessus
47J26]
gi|363995422|gb|EHM16640.1| ABC transporter ATP-binding protein [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|392145012|gb|EIU70737.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-152-0914]
gi|392148292|gb|EIU74010.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-153-0915]
gi|392155741|gb|EIU81447.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 1S-154-0310]
gi|392179565|gb|EIV05217.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense 2B-0307]
gi|392239307|gb|EIV64800.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium massiliense CCUG 48898]
Length = 851
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 9 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 65
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 66 -GWVEVRDDTVINLGD 80
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ SG IQDL + NGTF+N + ++
Sbjct: 220 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTSGGLEIQDLHTINGTFVNGVQVEQSS- 276
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 277 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 305
>gi|169630777|ref|YP_001704426.1| ABC transporter ATP-binding protein [Mycobacterium abscessus ATCC
19977]
gi|419717826|ref|ZP_14245192.1| ABC transporter ATP-binding protein [Mycobacterium abscessus M94]
gi|420865188|ref|ZP_15328577.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0303]
gi|420869978|ref|ZP_15333360.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0726-RA]
gi|169242744|emb|CAM63772.1| Putative ABC transporter, ATP-binding protein [Mycobacterium
abscessus]
gi|382937279|gb|EIC61644.1| ABC transporter ATP-binding protein [Mycobacterium abscessus M94]
gi|392063904|gb|EIT89753.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0303]
gi|392069448|gb|EIT95295.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium abscessus 4S-0726-RA]
Length = 861
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 19 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 75
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 76 -GWVEVRDDTVINLGD 90
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ G IQDL + NGTF+N + ++
Sbjct: 230 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTPGGLEIQDLHTINGTFVNGVQVEQSS- 286
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 287 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 315
>gi|419709011|ref|ZP_14236479.1| ABC transporter ATP-binding protein [Mycobacterium abscessus M93]
gi|382942892|gb|EIC67206.1| ABC transporter ATP-binding protein [Mycobacterium abscessus M93]
Length = 861
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 19 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 75
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 76 -GWVEVRDDTVINLGD 90
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
+EP G + + G G T + PG+ I +GR N + + D S H ++ G
Sbjct: 209 VEPFGTRAMRALG--IGGTPKPTPGA-ITVGR-APDNTIVVNDVLASRHHALLLPTPGGL 264
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
IQDL + NGTF+N + ++ LRE DT+ +G+ + + QD ++ KP
Sbjct: 265 EIQDLHTINGTFVNGVQVEQSS---LREGDTVTIGN--------VDLVVQDGTLVKPTTA 313
Query: 121 PR 122
R
Sbjct: 314 TR 315
>gi|358462225|ref|ZP_09172364.1| FHA domain containing protein [Frankia sp. CN3]
gi|357072067|gb|EHI81626.1| FHA domain containing protein [Frankia sp. CN3]
Length = 183
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
P KL++ +GP +G I G I IGR + + + DD S +H + G+W ++
Sbjct: 88 PPSKLVVTKGPLAGTVIPLT-GEPITIGR-APDSTLVLDDDFASGRHARLVHHDGRWFVE 145
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
DL+S NGTFL T + TP + +++G
Sbjct: 146 DLNSTNGTFLEHTKV--TTPMPVSLGAPVRIG 175
>gi|220906292|ref|YP_002481603.1| guanylate cyclase [Cyanothece sp. PCC 7425]
gi|219862903|gb|ACL43242.1| adenylate/guanylate cyclase [Cyanothece sp. PCC 7425]
Length = 350
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
E + G +RIGR R ND+ ++D +S H ++ + + DL S NGTF N +
Sbjct: 57 EIRVGQTLRIGR-SRNNDLVLEDGNVSRYHAVMIASESGIVLSDLASLNGTFANQRRI-- 113
Query: 81 NTPFDLRENDTIKLGDCTTISVQMITMDSQDESVA 115
TP DL D I LG+ + + S D VA
Sbjct: 114 TTPLDLNNGDRISLGENNAVFIVEFQSASADREVA 148
>gi|418421804|ref|ZP_12994977.1| ABC transporter ATP-binding protein [Mycobacterium abscessus
subsp. bolletii BD]
gi|363995720|gb|EHM16937.1| ABC transporter ATP-binding protein [Mycobacterium abscessus
subsp. bolletii BD]
Length = 851
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+F PG I IGR + DV I +S HLII V GKW +D S NG F+N +
Sbjct: 9 KFAPGHDIHIGRDIHA-DVRITHPLVSRIHLIIRFVDGKWIAEDQRSLNGIFVNGRQV-- 65
Query: 81 NTPFDLRENDTIKLGD 96
++R++ I LGD
Sbjct: 66 -GWVEVRDDTVINLGD 80
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
PG+ I +GR N + + D S H ++ G IQDL + NGTF+N + ++
Sbjct: 220 PGA-ITVGR-APDNTIVVNDVLASRHHALLLPTPGGLEIQDLHTINGTFVNGVQVEQSS- 276
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPR 122
LRE DT+ +G+ + + QD ++ KP R
Sbjct: 277 --LREGDTVTIGN--------VDLVVQDGTLVKPTTATR 305
>gi|320160813|ref|YP_004174037.1| hypothetical protein ANT_14090 [Anaerolinea thermophila UNI-1]
gi|319994666|dbj|BAJ63437.1| hypothetical protein ANT_14090 [Anaerolinea thermophila UNI-1]
Length = 217
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P G +LIM GP++G ++I +GR + ND+ + D +S H + + +
Sbjct: 2 PVGYQLIMRSGPQAGGVFPLT-KTEISLGRDLT-NDLVVSDPEVSRHHARLYLQGNTYVL 59
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPK 118
+DL S NGTF+N L P+ LR ++I LG+ +++ +D +V P
Sbjct: 60 EDLGSTNGTFVNGIRL--TGPYPLRPGESISLGERVVFLYEVV---DEDATVVTPA 110
>gi|444912543|ref|ZP_21232704.1| FHA domain protein [Cystobacter fuscus DSM 2262]
gi|444716761|gb|ELW57602.1| FHA domain protein [Cystobacter fuscus DSM 2262]
Length = 549
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G+ + G + IGR N + I D +S +H++I + G WT+ DL S NGT
Sbjct: 5 GPCAGQEFGLEDGEYV-IGR-ANDNPICIPDSSVSRRHVLIRRLGGGWTVNDLGSGNGTL 62
Query: 73 LNSTTLPPNTPFDLRENDTIKLGD 96
+N L TP L + LGD
Sbjct: 63 MNGEPLSEETP--LVSGAVLTLGD 84
>gi|399923821|ref|ZP_10781179.1| FHA domain-containing protein [Peptoniphilus rhinitidis 1-13]
Length = 146
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ IKD +S HL I + + I+DL S NGTFLN + PN +L+ ND I +G
Sbjct: 78 NDIVIKDKFVSKNHLKIIVKNQGYYIEDLGSANGTFLNGMQVDPNELIELQNNDKIGVGF 137
Query: 97 CTTISV 102
I V
Sbjct: 138 IQFIFV 143
>gi|229816933|ref|ZP_04447215.1| hypothetical protein BIFANG_02184 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785678|gb|EEP21792.1| hypothetical protein BIFANG_02184 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 176
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP G +I G I +GR N V + D+ +SS H I ++ SG+W I+DL
Sbjct: 84 LVIIDGPLVGSSIPLN-GEAITMGR-SASNTVVLDDEFVSSHHARIYPDAASGQWVIEDL 141
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
S NGT +N T LPP P F+LR
Sbjct: 142 GSTNGTIVNDQRLNVPTILPPRMPVRIGATTFELR 176
>gi|406912442|gb|EKD52054.1| FHA/GGDEF protein [uncultured bacterium]
Length = 299
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGN----DVTIKDDGISSKHLIIESVSGKWTIQ 63
LI+V G G+T G I+ G D+ I+D+ IS KH I G+ TIQ
Sbjct: 24 LIIVAGMHIGKTYSLAEG------EIIAGRSPDCDIWIEDNTISRKHFRIRKSEGQCTIQ 77
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES--VAKPKR 119
D++S NGTF+NS L P L+ +D I++ T +I D DE+ +++ KR
Sbjct: 78 DMNSTNGTFVNSKRLTK--PVTLQASDKIQISKDT-----IIQFDYFDENRKISEHKR 128
>gi|442320548|ref|YP_007360569.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441488190|gb|AGC44885.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 744
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 3 PPGMK----LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG 58
PPG L + GP +G+T K K+ +GR+ + ++DD +S KH +E+ S
Sbjct: 159 PPGASSGPMLRGMVGPWAGKTYPLK--GKVLVGRLPPAG-IVLEDDSVSRKHAELEATSA 215
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++DL S NGT LN L P P +L+ D ++ G
Sbjct: 216 GVLVRDLGSANGTLLNGDPLGPE-PVELQAGDQLQFG 251
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M ++VR P E E++ ++++GR G D+ + + G+S H + S +G I+DL
Sbjct: 1 MSTLVVRLPDGTEN-EYEVAGELKLGR-QPGCDILLTEGGVSRTHARVFSEAGTVFIEDL 58
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
S NGTF++ + P L + LGD T +
Sbjct: 59 GSANGTFVDGERI--GEPTALTPQSEVVLGDYTLL 91
>gi|433605996|ref|YP_007038365.1| FHA domain-containing protein [Saccharothrix espanaensis DSM 44229]
gi|407883849|emb|CCH31492.1| FHA domain-containing protein [Saccharothrix espanaensis DSM 44229]
Length = 215
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 6 MKLIMVRGPRSG--ETIEFKP-------GSKIRIGRIVRGNDV--TI------KDDGISS 48
++++ V GP + E EF P G ++ IGR R + T+ +D G+S
Sbjct: 96 LRVVAVGGPDAAAVEFPEFCPPRRFDLVGPQVTIGRRSRSRGIFPTVDLVGPPEDPGVSH 155
Query: 49 KHLIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCTTISVQ 103
H ++ S G+W++ DL S NGT +N P PN P L D + +G TTI++
Sbjct: 156 SHALLVSADGEWSVVDLGSTNGTTVNDEEEPVKPNRPRRLAAGDRVHVGAWTTITLH 212
>gi|255076301|ref|XP_002501825.1| predicted protein [Micromonas sp. RCC299]
gi|226517089|gb|ACO63083.1| predicted protein [Micromonas sp. RCC299]
Length = 945
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPG-SKIRIGRIVRGNDVTIKDDGISSKH-----LIIES- 55
P ++L ++ G G + PG IGR+ ND+ + + +SS H +S
Sbjct: 531 PATLRLEVLSGSAWGSSFGAPPGVESATIGRLP-DNDLQLPNGEVSSFHAEARWFWFDSE 589
Query: 56 VS------GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG---DCTTISV 102
V+ G+W + DL S NGTFLN+ L P F LR+ D ++LG D T+ V
Sbjct: 590 VAEEGGDVGEWRVADLGSTNGTFLNAEALRPRRWFPLRDGDRVRLGERTDSPTVHV 645
>gi|303291113|ref|XP_003064843.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453869|gb|EEH51177.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 283
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 28 IRIGRIVRGNDVTIKDD-GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNTPFD 85
++IGR R + + +K D +S KH +I +W IQD+ S NGT +N L P ++P
Sbjct: 1 MQIGR-TRTSQLHVKGDPAVSQKHAVITWAYDQWWIQDVGSSNGTAINGEELEPDDSPTG 59
Query: 86 LRENDTIKLGDCTTISVQMI 105
LR+ D + +G TT V ++
Sbjct: 60 LRDGDVLTIGTDTTAKVTIV 79
>gi|303314389|ref|XP_003067203.1| FHA domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240106871|gb|EER25058.1| FHA domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320037484|gb|EFW19421.1| hypothetical protein CPSG_03805 [Coccidioides posadasii str.
Silveira]
Length = 606
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 25/117 (21%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSK--------IRIGRIVRGNDVTIKDDG---------- 45
P ++LI S ++ F P S+ IR+GR + V + +
Sbjct: 217 PTIRLIPHHAQYSRPSLPFTPISRTMPDDDCIIRVGRYSERDGVPVANPSKPSAAPVGFK 276
Query: 46 ---ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKLG 95
+S KH V+G+W I+D+ S +GTFLN L PNTP + +R+ D I+LG
Sbjct: 277 SKVVSRKHCEFSFVNGQWHIKDVGSSSGTFLNHMRLSQPNTPSRLYAVRDGDVIQLG 333
>gi|311063554|ref|YP_003970279.1| hypothetical protein BBPR_0107 [Bifidobacterium bifidum PRL2010]
gi|313139353|ref|ZP_07801546.1| FHA domain-containing protein [Bifidobacterium bifidum NCIMB 41171]
gi|421733845|ref|ZP_16172940.1| hypothetical protein B216_03012 [Bifidobacterium bifidum LMG 13195]
gi|310865873|gb|ADP35242.1| Conserved hypothetical secreted protein with FHA domain
[Bifidobacterium bifidum PRL2010]
gi|313131863|gb|EFR49480.1| FHA domain-containing protein [Bifidobacterium bifidum NCIMB 41171]
gi|407078218|gb|EKE51029.1| hypothetical protein B216_03012 [Bifidobacterium bifidum LMG 13195]
Length = 180
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP++G ++ I +GR N V + D+ +SS H I + SG+W I+DL
Sbjct: 88 LVIIDGPKAGASVPLT-SESITLGR-AASNTVVLDDEFVSSHHARIYKDPASGQWAIEDL 145
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 146 GSTNGTIVNQQRL--NMPMLLPPRMPVRIGATT 176
>gi|355340877|gb|AER58215.1| serine phosphatase [uncultured Acidobacteria bacterium]
Length = 548
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 36 GNDVTIKDD-GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
GN++ +D G+S +HLIIE WT+QDL+S NGTF+N + T F L ND I
Sbjct: 39 GNELCYSEDAGLSRQHLIIERKGDSWTVQDLNSKNGTFVNGERI--TTAFTLGPNDRITA 96
Query: 95 G 95
G
Sbjct: 97 G 97
>gi|156743216|ref|YP_001433345.1| serine/threonine kinase [Roseiflexus castenholzii DSM 13941]
gi|156234544|gb|ABU59327.1| serine/threonine protein kinase with FHA domain [Roseiflexus
castenholzii DSM 13941]
Length = 475
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 9 IMVRGPRSG--ETIEFKPGSKIRIGR------IVRGNDVTIKDDGISSKH-LIIESVSGK 59
+++ PRS + IE P +RIGR D+ D GI+S+H +IE
Sbjct: 374 LIIASPRSTFEQKIEHTP---LRIGRRDPRQHHYPELDLAEHDRGIASRHHALIERNGDY 430
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+T+ DL S NGT +N T LPP+ LR D IK+G+
Sbjct: 431 YTLTDLGSTNGTLVNGTPLPPHQKHRLRSGDRIKIGEV 468
>gi|327262298|ref|XP_003215962.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Anolis
carolinensis]
Length = 495
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-E 54
E P + R S E + + GS+I IGR G VT + IS H + +
Sbjct: 14 EEPARIWCLKRAGLSEEWLLLEGGSEITIGR---GAGVTYQLISKSCPLMISRNHCVFKQ 70
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ G+WT+ D S NG +LN + P P+ L+E D I+LG
Sbjct: 71 NTEGQWTVTDNKSLNGVWLNCERIDPLKPYCLQEGDFIQLG 111
>gi|390936008|ref|YP_006393567.1| hypothetical protein BBB_0091 [Bifidobacterium bifidum BGN4]
gi|389889621|gb|AFL03688.1| hypothetical protein BBB_0091 [Bifidobacterium bifidum BGN4]
Length = 180
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP++G ++ I +GR N V + D+ +SS H I + SG+W I+DL
Sbjct: 88 LVIIDGPKAGASVPLT-SESITLGR-AASNTVVLDDEFVSSHHARIYKDPASGQWAIEDL 145
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 146 GSTNGTIVNQQRL--NMPMLLPPRMPVRIGATT 176
>gi|162450035|ref|YP_001612402.1| FHA/GGDEF domain-containing protein [Sorangium cellulosum So ce56]
gi|161160617|emb|CAN91922.1| FHA and GGDEF domain protein [Sorangium cellulosum So ce56]
Length = 310
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
LI++ G GE + G++I IGR G + + DDGIS +H + + + I+DL+
Sbjct: 35 YLIVLAGSNVGEMYRVE-GAEIVIGR-ASGATIRLNDDGISRRHARLLQMDSQVLIEDLN 92
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESV 114
S NGT +N + T L + D I+LG T + + D DES
Sbjct: 93 SSNGTMVNGEHI---TRVALHDGDKIRLGSTTIL--KFTYHDHLDESF 135
>gi|262196650|ref|YP_003267859.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262079997|gb|ACY15966.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 694
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
+EF S++ IGR V+GNDV + +S +H I GK+ I DL S NGT++N +
Sbjct: 16 LEFDK-SEVTIGR-VQGNDVILPKGNVSKRHARIVLKDGKFIIVDLKSTNGTYVNGRKI- 72
Query: 80 PNTPFDLRENDTIKLGD 96
+P ++E+D I +GD
Sbjct: 73 -TSPLVVKESDKIYIGD 88
>gi|126433830|ref|YP_001069521.1| ABC transporter-like protein [Mycobacterium sp. JLS]
gi|126233630|gb|ABN97030.1| ABC transporter related protein [Mycobacterium sp. JLS]
Length = 866
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + IGR +R DV I IS HL++ G+W D S NG F+N
Sbjct: 15 GSTRTFAPGNDVVIGRDLRA-DVRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMFVNGR 73
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+P DLR+ ++ +G+
Sbjct: 74 RVP---AVDLRDGQSLNIGN 90
>gi|296133925|ref|YP_003641172.1| FHA domain-containing protein [Thermincola potens JR]
gi|296032503|gb|ADG83271.1| FHA domain containing protein [Thermincola potens JR]
Length = 520
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
S + IGR D I + I H I+ + G + I DLDS NGTF+N L N +
Sbjct: 442 STMVIGRNKETCDWVIANKSIGRAHAEIKCIDGVYYIVDLDSRNGTFINGDKLISNKQYA 501
Query: 86 LRENDTIKLGDCTTI 100
LREND I D +
Sbjct: 502 LRENDKITFADVDYL 516
>gi|442317965|ref|YP_007357986.1| sensory box histidine kinase/response regulator [Myxococcus
stipitatus DSM 14675]
gi|441485607|gb|AGC42302.1| sensory box histidine kinase/response regulator [Myxococcus
stipitatus DSM 14675]
Length = 753
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHL-IIESVSGKWTIQDLDSCNGTFL 73
G +PG I I RG+D T++ D G+S KH I+ + G + DL+S NGT L
Sbjct: 37 GRAFRLEPGEHI----IGRGSDATVRIDDHGVSRKHARIVRAPDGGCHVTDLESTNGTLL 92
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSV 133
N T P +L+E D +++G T + Q E + R A V G
Sbjct: 93 NGT---PIATAELQEGDRLQIGTVTVFRFSKREVLEQRE---EQLRQALSAARV-GIWDW 145
Query: 134 RATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENLE 193
A SGR + LGL G++ GR L+E+ +V ++
Sbjct: 146 NAQSGRVTWSEQVDRLLGLPVGKLS----------GRAMELEEVVHPGDLPRVREALSIA 195
Query: 194 LEEGGEIESESKITKKGRG 212
LE+ +++ E +I G G
Sbjct: 196 LEKKTQVDVEYRIEPPGSG 214
>gi|365861136|ref|ZP_09400914.1| hypothetical protein SPW_1216 [Streptomyces sp. W007]
gi|364009375|gb|EHM30337.1| hypothetical protein SPW_1216 [Streptomyces sp. W007]
Length = 441
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS+I IGR V +D G+S +H ++++ G W + D +S NGT LN
Sbjct: 350 GSQITIGRRRHSTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTLNG 409
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L++ D + +G TTI+V
Sbjct: 410 AEDPIQPYVPVPLQDGDQVHVGAWTTITV 438
>gi|425735994|ref|ZP_18854304.1| FHA domain-containing protein [Brevibacterium casei S18]
gi|425478928|gb|EKU46111.1| FHA domain-containing protein [Brevibacterium casei S18]
Length = 171
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G ++ G+ + GR N + I DD SS H I + G W ++DL S NGTF
Sbjct: 85 GPLAGTSLILS-GAPVTFGR-APDNTIVIGDDFASSHHARIIARGGAWVLEDLSSTNGTF 142
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCT 98
++ + + PFDL + I +G T
Sbjct: 143 VDGSKI--TAPFDLGIGNQITIGHTT 166
>gi|310286661|ref|YP_003937919.1| hypothetical protein BBIF_0140 [Bifidobacterium bifidum S17]
gi|309250597|gb|ADO52345.1| Conserved hypothetical secreted protein with FHA domain
[Bifidobacterium bifidum S17]
Length = 180
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP++G ++ I +GR N V + D+ +SS H I + SG+W I+DL
Sbjct: 88 LVIIDGPKAGASVPLT-SESITLGR-AAFNTVVLDDEFVSSHHARIYKDPASGQWAIEDL 145
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 146 GSTNGTIVNQQRL--NMPMLLPPRMPVRIGATT 176
>gi|282882063|ref|ZP_06290704.1| FHA domain-containing protein [Peptoniphilus lacrimalis 315-B]
gi|281298093|gb|EFA90548.1| FHA domain-containing protein [Peptoniphilus lacrimalis 315-B]
Length = 146
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
+ G + +GR + ND+ IKD +S HL I +G + ++DL+S NGT+LN +
Sbjct: 64 YLLGGSVTLGRSSK-NDIVIKDKFVSKNHLNITERNGIFYLEDLNSANGTYLNGEKVDAG 122
Query: 82 TPFDLRENDTIKLGDCTTISVQ 103
T +L+ D I +G I V+
Sbjct: 123 TLIELQNGDKIGVGFIQFIFVE 144
>gi|88602776|ref|YP_502954.1| FHA domain-containing protein [Methanospirillum hungatei JF-1]
gi|88188238|gb|ABD41235.1| FHA domain containing protein [Methanospirillum hungatei JF-1]
Length = 155
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 19 TIEFKPGSKIRI------GRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
T+ PG+ I + GR G + + +G+S +H + +GKW ++D +S NGT+
Sbjct: 63 TLSMSPGATITVHHGDTVGRDAVGRTLLQQYNGVSRQHATFKYFNGKWLVRDENSTNGTY 122
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
+ + P+ +++++ D+I T VQ +
Sbjct: 123 IQGKKISPDKWYEVKDGDSISFSSNCTFMVQTM 155
>gi|403351118|gb|EJY75040.1| FHA domain protein [Oxytricha trifallax]
Length = 734
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNST 76
E I+ S IGR D+ +++ IS KH II+ +G I DL S +GTF+N
Sbjct: 62 EEIDLSKKSFYSIGRQKDTVDILMENPTISRKHAIIQHKDTGDIFIYDLGSTHGTFVNKR 121
Query: 77 TLPPNTPFDLRENDTIKLGDCTTI 100
+P N L ND +++G T I
Sbjct: 122 QIPANQYIKLSLNDQVRIGQSTRI 145
>gi|345015206|ref|YP_004817560.1| forkhead-associated protein [Streptomyces violaceusniger Tu 4113]
gi|344041555|gb|AEM87280.1| Forkhead-associated protein [Streptomyces violaceusniger Tu 4113]
Length = 382
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGR----IVRGNDVTI----KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
G +I IGR D+ + +D G+S +H L+++ G W + D DS NGT +N
Sbjct: 291 GGQITIGRRRHSTGEAPDIDLGRPPEDPGVSHQHALLVQQPDGVWAVVDQDSTNGTTING 350
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P LR+ D + +G TTI+V
Sbjct: 351 GEEPIQPFVPVPLRDGDRVHVGAWTTITV 379
>gi|428208930|ref|YP_007093283.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010851|gb|AFY89414.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Chroococcidiopsis thermalis PCC
7203]
Length = 1005
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 13 GPRSGETIEFKP-GSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCN 69
G R G EF G +RIGR N++ + + +S H L + +SG + + DL S
Sbjct: 11 GRRDGSKQEFLLNGDVVRIGR-AGDNNLVLSESNVSRYHAQLAPQGISG-YLLTDLGSST 68
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLGDC 97
GTF+N+ L P+ P L++ DTI++G C
Sbjct: 69 GTFVNNARLAPSQPRQLKDGDTIRIGGC 96
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I +S H I G + I DL+S NGTF+N + + LR DTI++G
Sbjct: 264 NDIAIDHPTVSRYHARISRQDGTFAIADLNSSNGTFVNGKRVSGSQ--SLRPEDTIRIG 320
>gi|269926532|ref|YP_003323155.1| FHA domain-containing protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790192|gb|ACZ42333.1| FHA domain containing protein [Thermobaculum terrenum ATCC BAA-798]
Length = 245
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P L ++ GP++G+ P + IGR + N + ++D +S H I +W I
Sbjct: 148 PASAFLTVISGPQNGQRFHLSPSGRASIGRGL-DNQIILEDPMVSRHHAEIYLRGSEWYI 206
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+DL+S NGT++N + + L D I LG
Sbjct: 207 KDLNSTNGTYVNGHAIREKS---LEHGDRITLGSV 238
>gi|383455064|ref|YP_005369053.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
gi|380732127|gb|AFE08129.1| sigma-54 dependent transcription regulator [Corallococcus
coralloides DSM 2259]
Length = 578
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L+++ GP +G E S++ +GR D+ ++DD +S +H L +++V+G+ ++D
Sbjct: 3 ALLLLTGPSAGRRYEVV--SQLTLGR-SPSCDIPLEDDQVSRRHAQLFLDTVAGQVRLRD 59
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
L S NGT LN L LR D +++G TI+V
Sbjct: 60 LGSTNGTLLNGQRLALQEEAVLRPGDRMRVG--ATIAVY 96
>gi|408530680|emb|CCK28854.1| hypothetical protein BN159_4475 [Streptomyces davawensis JCM 4913]
Length = 171
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 78 KLVVSEGILTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 135
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
+S NGT+L+ T L TP L
Sbjct: 136 NSTNGTYLDRTRLTTPTPIPL 156
>gi|307718392|ref|YP_003873924.1| hypothetical protein STHERM_c06930 [Spirochaeta thermophila DSM
6192]
gi|306532117|gb|ADN01651.1| hypothetical protein STHERM_c06930 [Spirochaeta thermophila DSM
6192]
Length = 127
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+KI IGR NDV I + S H I+ V ++ ++DL+S NGT+LN +PP+
Sbjct: 52 TKITIGR-ASDNDVVIDNKLASRYHAFIQKVKNEYFLKDLNSTNGTYLNGVRIPPDKYLK 110
Query: 86 LRENDTIKLG 95
L D + +G
Sbjct: 111 LAPGDVVTIG 120
>gi|383807885|ref|ZP_09963440.1| PF12401 family / FHA domain multi-domain protein [Rothia aeria
F0474]
gi|383449349|gb|EID52291.1| PF12401 family / FHA domain multi-domain protein [Rothia aeria
F0474]
Length = 287
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 33 IVRGNDVTIKDDG--ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREND 90
I RG+ I+ DG IS +HL I SG + + DL S NGT LN T L TP L +
Sbjct: 210 IGRGSVADIRVDGKSISRRHLQISHQSGAYIVTDLGSTNGTMLNGTAL--RTPATLHDGS 267
Query: 91 TIKLGDCTTISVQMI 105
++LGD T+I +M+
Sbjct: 268 LLRLGD-TSIFFRMM 281
>gi|409990456|ref|ZP_11273827.1| ABC transporter ATP-binding protein [Arthrospira platensis str.
Paraca]
gi|409938686|gb|EKN79979.1| ABC transporter ATP-binding protein [Arthrospira platensis str.
Paraca]
Length = 919
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N V + D +S H I ++ I DL S GT LN+ T+PP TP L NDTI++GD
Sbjct: 36 NTVVLTDMSVSRHHAEIRLEGDRYVIVDLGSTIGTLLNADTIPPKTPQPLANNDTIQIGD 95
Query: 97 C 97
Sbjct: 96 A 96
>gi|182438655|ref|YP_001826374.1| hypothetical protein SGR_4862 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467171|dbj|BAG21691.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 478
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS+I IGR V +D G+S +H ++++ G W + D +S NGT LN
Sbjct: 387 GSQITIGRRRHSTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTLNG 446
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L++ D + +G TTI+V
Sbjct: 447 AEDPIQPYVPVPLQDGDQVHVGAWTTITV 475
>gi|326779304|ref|ZP_08238569.1| Forkhead-associated protein [Streptomyces griseus XylebKG-1]
gi|326659637|gb|EGE44483.1| Forkhead-associated protein [Streptomyces griseus XylebKG-1]
Length = 477
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS+I IGR V +D G+S +H ++++ G W + D +S NGT LN
Sbjct: 386 GSQITIGRRRHSTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTLNG 445
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L++ D + +G TTI+V
Sbjct: 446 AEDPIQPYVPVPLQDGDQVHVGAWTTITV 474
>gi|291567280|dbj|BAI89552.1| ABC transporter ATP-binding protein [Arthrospira platensis
NIES-39]
Length = 919
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N V + D +S H I ++ I DL S GT LN+ T+PP TP L NDTI++GD
Sbjct: 36 NTVVLTDMSVSRHHAEIRLEGDRYVIVDLGSTIGTLLNADTIPPKTPQPLANNDTIQIGD 95
Query: 97 C 97
Sbjct: 96 A 96
>gi|225572868|ref|ZP_03781623.1| hypothetical protein RUMHYD_01059 [Blautia hydrogenotrophica DSM
10507]
gi|225039794|gb|EEG50040.1| FHA domain protein [Blautia hydrogenotrophica DSM 10507]
Length = 463
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+G++ DV + +S H I + GK+ + DL+S NGTF+N L ++LR+
Sbjct: 390 VGKLKTAVDVVLPYPTVSRVHAKIRKIQGKFYLMDLNSRNGTFVNGRVLESGEEYELRDQ 449
Query: 90 DTIKLGDCTTISVQ 103
D ++ D + I ++
Sbjct: 450 DEVQFADISYIFLK 463
>gi|334323524|ref|XP_003340404.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Monodelphis
domestica]
Length = 484
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKW 60
L + R S E + + S++ +GR G+DVT + IS H + ++ G+W
Sbjct: 13 LCLQRVGMSAEWLLLEDRSEVTVGR---GSDVTYQLLSKICPLMISRNHCVFKQNAEGQW 69
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG------DCTTISVQMITMDSQDESV 114
T+ D S NG +LN L P + ++E D I+LG + ++I D + +
Sbjct: 70 TMMDNKSLNGVWLNKERLDPLKAYPIKEGDRIQLGVPLENKENAEYEYEVIEEDWEKIHL 129
Query: 115 AKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVETLGLEGG 155
RN R VR + ++K E +++ G EG
Sbjct: 130 CLALRNDR--------PVVRCSRTKRKCSLEELDSPGAEGS 162
>gi|392869830|gb|EAS28360.2| FHA domain-containing protein [Coccidioides immitis RS]
Length = 606
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 25/117 (21%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSK--------IRIGRIVRGNDVTIKDDG---------- 45
P ++LI S ++ F P S+ I++GR + V + +
Sbjct: 217 PTIRLIPHHAQYSRPSLPFTPISRTMPDDDCIIKVGRYSERDGVPVANPSKPSAAPVGFK 276
Query: 46 ---ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKLG 95
+S KH V+G+W I+D+ S +GTFLN L PNTP + +R+ D I+LG
Sbjct: 277 SKVVSRKHCEFSFVNGQWHIKDVGSSSGTFLNHMRLSQPNTPSRLYAVRDGDVIQLG 333
>gi|411005796|ref|ZP_11382125.1| FHA domain containing protein [Streptomyces globisporus C-1027]
Length = 467
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS++ IGR + V +D G+S +H ++++ G W + D +S NGT LN
Sbjct: 376 GSQVTIGRRRQSTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTLNG 435
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L++ D + +G TTI+V
Sbjct: 436 AEEPIQPYVPVPLQDGDQVHVGAWTTITV 464
>gi|108798172|ref|YP_638369.1| FHA domain-containing protein [Mycobacterium sp. MCS]
gi|119867268|ref|YP_937220.1| ABC transporter-like protein [Mycobacterium sp. KMS]
gi|108768591|gb|ABG07313.1| FHA domain containing protein [Mycobacterium sp. MCS]
gi|119693357|gb|ABL90430.1| ABC transporter related protein [Mycobacterium sp. KMS]
Length = 866
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + IGR +R DV I IS HL++ G+W D S NG F+N
Sbjct: 15 GSTRTFAPGNDVVIGRDLRA-DVRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMFVNGR 73
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+P D+R+ ++ +G+
Sbjct: 74 RVP---AVDIRDGQSLNIGN 90
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 23 KPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82
P I+IGR ND+ I D S H + +G I D S NGTF+N T + +
Sbjct: 225 APAGAIKIGR-ASDNDIVIPDVLASRHHASLVPAAGGTEIVDARSINGTFVNGTRV--ES 281
Query: 83 PFDLRENDTIKLGDC 97
F LR+ D + +G+
Sbjct: 282 AF-LRDGDVVTIGNI 295
>gi|119174550|ref|XP_001239636.1| hypothetical protein CIMG_09257 [Coccidioides immitis RS]
Length = 677
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 25/117 (21%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSK--------IRIGRIVRGNDVTIKDDG---------- 45
P ++LI S ++ F P S+ I++GR + V + +
Sbjct: 287 PTIRLIPHHAQYSRPSLPFTPISRTMPDDDCIIKVGRYSERDGVPVANPSKPSAAPVGFK 346
Query: 46 ---ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKLG 95
+S KH V+G+W I+D+ S +GTFLN L PNTP + +R+ D I+LG
Sbjct: 347 SKVVSRKHCEFSFVNGQWHIKDVGSSSGTFLNHMRLSQPNTPSRLYAVRDGDVIQLG 403
>gi|441142533|ref|ZP_20962401.1| hypothetical protein SRIM_00050 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622478|gb|ELQ85257.1| hypothetical protein SRIM_00050 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 175
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 82 KLVVSEGTLTGTTVALQ-GQTISLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 139
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 140 GSTNGTYLDRTRLTTPTPIPL 160
>gi|22298883|ref|NP_682130.1| ABC transporter ATP-binding protein [Thermosynechococcus
elongatus BP-1]
gi|22295064|dbj|BAC08892.1| ABC transporter ATP-binding protein [Thermosynechococcus
elongatus BP-1]
Length = 1029
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
P S +++GR ND+ + D +S H E G+ + DL S GT LN + PNTP
Sbjct: 21 PVSGLKVGR-APDNDIVLNDISVSRHHAFFEWREGQVHLVDLGSKAGTHLNGQAVVPNTP 79
Query: 84 FDLRENDTIKLGD 96
L + D I LG+
Sbjct: 80 IPLEDGDLITLGN 92
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I +S H IE +G + + DL S NGTF+N + P LR D+I++G
Sbjct: 268 NDLVIGHPTVSRHHAKIERRNGDFLLTDLGSSNGTFVNGREV--EEPTLLRVGDSIRIG 324
>gi|342217156|ref|ZP_08709803.1| FHA domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341588046|gb|EGS31446.1| FHA domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 142
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I IGR R ND+ IKD+ +S KHL I +G + I+DL+S NGT+LN + +LR
Sbjct: 70 ITIGRSSR-NDIVIKDNFVSKKHLQITDQNGTYFIEDLNSANGTYLNGELIHD--IIELR 126
Query: 88 ENDTIKLGDCTTISVQ 103
D I +G + V+
Sbjct: 127 NGDRIGIGFIQFLFVE 142
>gi|455648322|gb|EMF27202.1| hypothetical protein H114_20802 [Streptomyces gancidicus BKS 13-15]
Length = 169
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 76 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 133
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 134 GSTNGTYLDRTRLTTPTPISL 154
>gi|333978757|ref|YP_004516702.1| FHA domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822238|gb|AEG14901.1| FHA domain containing protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 4 PGMKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
PG +L+++ P R + + F G +I +GR N + I D S +H +I S ++
Sbjct: 66 PGGRLVVLASPDPRLEKGMTFYLGERITLGR-GEHNGLVIPDPFSSQEHAVIFSRGDQYW 124
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
+QDL S NGT+LN L + P L + D +++G T Q + + ES
Sbjct: 125 VQDLGSLNGTYLNEVRL--DRPTVLADGDRLRIGGVT---FQFVRWAYEVES 171
>gi|70989055|ref|XP_749377.1| cytoplasm to vacuole targeting Vps64 [Aspergillus fumigatus Af293]
gi|66847008|gb|EAL87339.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus
fumigatus Af293]
Length = 741
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGPRSGE--TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
EPP + L+ + G + T+ F P +RIGR V +G +S +H
Sbjct: 160 EPPAILTLLPINGTFEKKQITVPFYP-EVLRIGRQTNAKTVPTPVNGFFDSKVLSRQHAE 218
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I SGK I+D+ S NGTF+N L P + P +LRENDT++LG
Sbjct: 219 IWADKSGKIWIRDVKSSNGTFVNGQRLSPENRESEPHELRENDTLELG 266
>gi|159128791|gb|EDP53905.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus
fumigatus A1163]
Length = 741
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGPRSGE--TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
EPP + L+ + G + T+ F P +RIGR V +G +S +H
Sbjct: 160 EPPAILTLLPINGTFEKKQITVPFYP-EVLRIGRQTNAKTVPTPVNGFFDSKVLSRQHAE 218
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I SGK I+D+ S NGTF+N L P + P +LRENDT++LG
Sbjct: 219 IWADKSGKIWIRDVKSSNGTFVNGQRLSPENRESEPHELRENDTLELG 266
>gi|86743106|ref|YP_483506.1| FHA domain-containing protein [Frankia sp. CcI3]
gi|86569968|gb|ABD13777.1| FHA domain containing protein [Frankia sp. CcI3]
Length = 165
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KL++ +GP +G TI + + IGR + + + ++DD S +H + G+W ++DL
Sbjct: 73 KLVVTKGPLTGTTIPLG-TAPVTIGR-AQDSTLVLEDDFASGRHARLVPHDGQWFVEDLG 130
Query: 67 SCNGTFLNST 76
S NGTFLN T
Sbjct: 131 STNGTFLNRT 140
>gi|291452610|ref|ZP_06592000.1| secreted protein [Streptomyces albus J1074]
gi|359150986|ref|ZP_09183736.1| hypothetical protein StrS4_29886 [Streptomyces sp. S4]
gi|421741997|ref|ZP_16180151.1| FHA domain-containing protein [Streptomyces sp. SM8]
gi|291355559|gb|EFE82461.1| secreted protein [Streptomyces albus J1074]
gi|406689592|gb|EKC93459.1| FHA domain-containing protein [Streptomyces sp. SM8]
Length = 171
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I GKW ++DL
Sbjct: 78 KLVVSEGSLTGTTVALQ-GQTISLGR-AHDSTIVLDDDYASSRHARIYPDHDGKWIVEDL 135
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 136 GSTNGTYLDRTRLTTPTPIPL 156
>gi|384196261|ref|YP_005582005.1| FHA domain-containing protein [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|333109893|gb|AEF26909.1| FHA domain protein [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 174
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ G++I +GR N V + D+ +SS H + + SG+W I+DL
Sbjct: 82 LVIIDGPLAGSSVPLT-GAEIGLGR-AASNTVVLDDEFVSSHHARVYRDPSSGQWAIEDL 139
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 140 NSTNGTVVNQQRISQPTILPARVPVRIGATTFELR 174
>gi|321478114|gb|EFX89072.1| hypothetical protein DAPPUDRAFT_310816 [Daphnia pulex]
Length = 1238
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 36 GNDVTIKDDG--ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
G V I DG +S KH I++ ++ WTI+DL+S +G +LN + PNT L E D I
Sbjct: 35 GGTVDIVCDGKFVSLKHCILKFINNSWTIEDLESKHGVYLNGNKIVPNTQTILSERDVIG 94
Query: 94 LG 95
+G
Sbjct: 95 VG 96
>gi|125546150|gb|EAY92289.1| hypothetical protein OsI_14010 [Oryza sativa Indica Group]
Length = 561
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSK----IRIGRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G + G+K + +GR V + + +KD +S KH I+ + K
Sbjct: 163 LSLEVIAGPSHGINHYMQSGNKSMLPVTLGR-VPPSHLVLKDSEVSGKHAQIDWNANKLK 221
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W I D+ S NGTFLNS ++ P+ P +L + D I LG + +SVQ+
Sbjct: 222 WEIVDMGSLNGTFLNSRSVNHPDVGSRRWGEPAELADGDIITLGSSSKVSVQI 274
>gi|354581863|ref|ZP_09000766.1| FHA domain containing protein [Paenibacillus lactis 154]
gi|353200480|gb|EHB65940.1| FHA domain containing protein [Paenibacillus lactis 154]
Length = 232
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL-GD 96
D+T + +S KH + G+++I+DL+S +GTF+N L PN L+ D++ L GD
Sbjct: 40 DITFDNVYVSRKHAALIYRDGQFSIKDLNSKHGTFVNQQRLEPNGEAPLQHGDSVALAGD 99
Query: 97 CTTISVQMITMD 108
++ ++ MD
Sbjct: 100 LVVLTFSVLRMD 111
>gi|239987674|ref|ZP_04708338.1| hypothetical protein SrosN1_10248 [Streptomyces roseosporus NRRL
11379]
gi|291444640|ref|ZP_06584030.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291347587|gb|EFE74491.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 484
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS++ IGR + V +D G+S +H ++++ G W + D +S NGT LN
Sbjct: 393 GSQVTIGRRRQSTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTLNG 452
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L++ D + +G TTI+V
Sbjct: 453 AEEPIQPYVPVPLQDGDQVHVGAWTTITV 481
>gi|119025061|ref|YP_908906.1| hypothetical protein BAD_0043 [Bifidobacterium adolescentis ATCC
15703]
gi|154486392|ref|ZP_02027799.1| hypothetical protein BIFADO_00204 [Bifidobacterium adolescentis
L2-32]
gi|118764645|dbj|BAF38824.1| hypothetical protein BAD_0043 [Bifidobacterium adolescentis ATCC
15703]
gi|154084255|gb|EDN83300.1| FHA domain protein [Bifidobacterium adolescentis L2-32]
Length = 171
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ G+ I +GR N V + D+ +SS H + + +G+W I+DL
Sbjct: 79 LVIIDGPLAGSSVPLA-GNTITLGRSA-SNTVVLDDEFVSSHHARVYTDPATGRWAIEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 137 GSTNGTVVNHQRL--NAPMILGARVPVRIGATT 167
>gi|115456117|ref|NP_001051659.1| Os03g0809700 [Oryza sativa Japonica Group]
gi|50540751|gb|AAT77907.1| putative kinase-associated protein phosophatase [Oryza sativa
Japonica Group]
gi|108711684|gb|ABF99479.1| Protein phosphatase 2C containing protein, expressed [Oryza sativa
Japonica Group]
gi|113550130|dbj|BAF13573.1| Os03g0809700 [Oryza sativa Japonica Group]
gi|125588344|gb|EAZ29008.1| hypothetical protein OsJ_13055 [Oryza sativa Japonica Group]
gi|215701035|dbj|BAG92459.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 561
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSK----IRIGRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G + G+K + +GR V + + +KD +S KH I+ + K
Sbjct: 163 LALEVIAGPSHGINHYMQSGNKSMLPVTLGR-VPPSHLVLKDSEVSGKHAQIDWNANKLK 221
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W I D+ S NGTFLNS ++ P+ P +L + D I LG + +SVQ+
Sbjct: 222 WEIVDMGSLNGTFLNSRSVNHPDVGSRRWGEPAELADGDIITLGSSSKVSVQI 274
>gi|315644120|ref|ZP_07897290.1| transcriptional regulator, CadC [Paenibacillus vortex V453]
gi|315280495|gb|EFU43784.1| transcriptional regulator, CadC [Paenibacillus vortex V453]
Length = 230
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL-GD 96
D+ + +S +H + SG ++I+DLDS +GT++N L P L+ D I L GD
Sbjct: 40 DIAFDNIFVSRRHAALLYRSGHFSIKDLDSKHGTYVNKERLAPQEEVPLQHGDIIVLAGD 99
Query: 97 CTTISVQMITMD 108
+S +++MD
Sbjct: 100 LIVLSFSILSMD 111
>gi|383458955|ref|YP_005372944.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
gi|380731261|gb|AFE07263.1| FHA domain-containing protein [Corallococcus coralloides DSM 2259]
Length = 178
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTI 62
L+M++ S E P G ++R+GR G + + D +S +H ++ + G ++
Sbjct: 62 LVMLQAFDSLEVHFLGPEQDGQELRVGR-TEGCALMVHDPSVSKQHAVLRWHAAQGTCSV 120
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
QDL S NGT+LN+ L L + D + GD + ++ T+ S
Sbjct: 121 QDLKSMNGTWLNAAELGEGEERMLADGDALAFGDAQFLYLRAETLHSH 168
>gi|348690669|gb|EGZ30483.1| hypothetical protein PHYSODRAFT_344261 [Phytophthora sojae]
Length = 892
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNST 76
E I P S +GR DV ++ IS +H I+ + + DL S GTF+N
Sbjct: 179 EQISLGPSSCYVLGRSEDLTDVWLQHPSISRQHAAIVHDKHEQVCLMDLGSAQGTFVNGR 238
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQAN 126
+ PN P +LR+ D IK G T V T++++ + KR A+
Sbjct: 239 EIEPNEPRELRDGDRIKFGASTRTYVFQNTVENETKGQEPAKRTAAASAD 288
>gi|321451493|gb|EFX63126.1| hypothetical protein DAPPUDRAFT_335901 [Daphnia pulex]
Length = 1238
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 36 GNDVTIKDDG--ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
G V I DG +S KH I++ ++ WTI+DL+S +G +LN + PNT L E D I
Sbjct: 35 GGTVDIVCDGKFVSLKHCILKFINNSWTIEDLESKHGVYLNGNKIVPNTQTILSERDVIG 94
Query: 94 LG 95
+G
Sbjct: 95 VG 96
>gi|408828407|ref|ZP_11213297.1| hypothetical protein SsomD4_14560 [Streptomyces somaliensis DSM
40738]
Length = 164
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 71 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 128
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 129 GSTNGTYLDRTRLTAPTPIPL 149
>gi|374988166|ref|YP_004963661.1| hypothetical protein SBI_05410 [Streptomyces bingchenggensis BCW-1]
gi|297158818|gb|ADI08530.1| hypothetical protein SBI_05410 [Streptomyces bingchenggensis BCW-1]
Length = 174
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 81 KLVVSEGTLAGTTVALQ-GQTISLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 138
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 139 GSTNGTYLDRTRLTTPTPIPL 159
>gi|444916612|ref|ZP_21236725.1| FHA domain/GGDEF domain protein [Cystobacter fuscus DSM 2262]
gi|444711897|gb|ELW52830.1| FHA domain/GGDEF domain protein [Cystobacter fuscus DSM 2262]
Length = 294
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
++ + GP G+ + IGR GN + + D +S +H I + G+ +QDL S
Sbjct: 27 IVQIHGPELGKKYTLLE-HEFTIGR-EEGNHIVVDLDNVSRRHARIIRMQGRMFVQDLGS 84
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+LN + TP LR D IK+G
Sbjct: 85 TNGTYLNDQEVTQETP--LRSGDLIKVG 110
>gi|320583563|gb|EFW97776.1| hypothetical protein HPODL_0406 [Ogataea parapolymorpha DL-1]
Length = 156
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK----WTIQDLDSCNGTFLNSTTLPPN 81
S IG+ + ND+ + D+ +S+ H +++ S I DLDS NGTF+ LPPN
Sbjct: 70 SYYTIGKDPQTNDIVVADELVSANHAVLQFRSKNSEITAYIIDLDSTNGTFIKDHELPPN 129
Query: 82 TPFDLRENDTIKLGD 96
++ D ++ GD
Sbjct: 130 RYVEVLHKDVLRFGD 144
>gi|225352420|ref|ZP_03743443.1| hypothetical protein BIFPSEUDO_04040 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156927|gb|EEG70296.1| hypothetical protein BIFPSEUDO_04040 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 171
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ G+ I +GR N V + D+ +SS H + + +GKW I+DL
Sbjct: 79 LVIIDGPLAGSSVPLS-GNTITLGR-SASNTVVLDDEFVSSHHARVYTDPATGKWAIEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 137 GSTNGTVVNQQRL--NAPMILGSRVPVRIGATT 167
>gi|392542567|ref|ZP_10289704.1| FHA domain-containing protein [Pseudoalteromonas piscicida JCM
20779]
Length = 318
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+GR D I G+S H IIE KW I+D+ S NG ++N L N P+ L EN
Sbjct: 21 VGRYKYSVDTLIDKPGVSRHHAIIELNENKWFIRDV-STNGIWINDKKLDKNLPYQLFEN 79
Query: 90 DTIKLG 95
D I
Sbjct: 80 DKIDFA 85
>gi|339478330|gb|ABE94784.1| Conserved hypothetical secreted protein with FHA domain
[Bifidobacterium breve UCC2003]
Length = 174
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ G++I +GR N V + D+ +SS H + + SG+W I+DL
Sbjct: 82 LVIIDGPLAGSSVPLT-GAEIGLGR-AASNTVVLDDEFVSSHHARVYRDPSSGQWAIEDL 139
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 140 NSTNGTVVNQQRISQPTILPARIPVRIGATTFELR 174
>gi|256391360|ref|YP_003112924.1| forkhead-associated protein [Catenulispora acidiphila DSM 44928]
gi|256357586|gb|ACU71083.1| Forkhead-associated protein [Catenulispora acidiphila DSM 44928]
Length = 303
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 25 GSKIRIGRIVRGNDVTIK------DDGISSKHLIIES-VSGKWTIQDLDSCNGTFLNSTT 77
G +RIGR + +V I D G+S H +++ G W + DL+S NGT LN T
Sbjct: 213 GDTVRIGRSGKRGNVDIDLTGPPTDPGVSHLHAVLQQRADGGWQVVDLESMNGTVLNDDT 272
Query: 78 --LPPNTPFDLRENDTIKLGDCTTISV 102
+PPN F + I +G TT+++
Sbjct: 273 APIPPNQAFPVEAGHRIHVGVWTTLTL 299
>gi|409203284|ref|ZP_11231487.1| FHA domain-containing protein [Pseudoalteromonas flavipulchra
JG1]
Length = 318
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+GR D I G+S H IIE KW I+D+ S NG ++N L N P+ L EN
Sbjct: 21 VGRYKYSVDTLIDKPGVSRHHAIIELNENKWFIRDV-STNGIWINDKKLDKNLPYQLFEN 79
Query: 90 DTIKLG 95
D I
Sbjct: 80 DKIDFA 85
>gi|195069823|ref|XP_001997039.1| GH25247 [Drosophila grimshawi]
gi|193905760|gb|EDW04627.1| GH25247 [Drosophila grimshawi]
Length = 537
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 43 DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
DD S+ +L I S W I DL S +GTFLN LPP +R +KLG T + +
Sbjct: 123 DDVFSADNLPISDQSEGWYIYDLGSTHGTFLNKQRLPPRVYIRIRVGHMLKLGSSTRVYI 182
>gi|108762506|ref|YP_634506.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108466386|gb|ABF91571.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 177
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTI 62
+M+RG + E +P G + +GRI G + + D +S H I+ + +G ++
Sbjct: 62 FVMLRGFDALEVHFLRPETEGEEFSVGRI-EGCSLVVPDPSVSKLHAILRWHAQAGDCSV 120
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
+D S NGT++N+++L P+ L + D + GD + ++ T+ + +A P R
Sbjct: 121 RDQGSMNGTWVNASSLGPDQDRMLNDGDALAFGDAQFLYLRTETLHAHLR-MASPSR 176
>gi|417942685|ref|ZP_12585950.1| Putative FHA domain protein [Bifidobacterium breve CECT 7263]
gi|376166725|gb|EHS85613.1| Putative FHA domain protein [Bifidobacterium breve CECT 7263]
Length = 174
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ G++I +GR N V + D+ +SS H + + SG+W I+DL
Sbjct: 82 LVIIDGPLAGSSVPLT-GAEIGLGR-AASNTVVLDDEFVSSHHARVYRDPSSGQWAIEDL 139
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 140 NSTNGTVVNQKRISQPTILPARIPVRIGATTFELR 174
>gi|408679346|ref|YP_006879173.1| FHA-domain-containing proteins [Streptomyces venezuelae ATCC 10712]
gi|328883675|emb|CCA56914.1| FHA-domain-containing proteins [Streptomyces venezuelae ATCC 10712]
Length = 175
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 82 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 139
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 140 GSTNGTYLDRTRLTTATPIPL 160
>gi|291455756|ref|ZP_06595146.1| putative FHA domain protein [Bifidobacterium breve DSM 20213 = JCM
1192]
gi|291382684|gb|EFE90202.1| putative FHA domain protein [Bifidobacterium breve DSM 20213 = JCM
1192]
Length = 174
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ G++I +GR N V + D+ +SS H + + SG+W I+DL
Sbjct: 82 LVIIDGPLAGSSVPLT-GAEIGLGR-AASNTVVLDDEFVSSHHARVYRDPSSGQWAIEDL 139
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 140 NSTNGTVVNQQRISQPTILPTRVPVRIGATTFELR 174
>gi|154483645|ref|ZP_02026093.1| hypothetical protein EUBVEN_01349 [Eubacterium ventriosum ATCC
27560]
gi|149735555|gb|EDM51441.1| FHA domain protein [Eubacterium ventriosum ATCC 27560]
Length = 256
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
S IGR D+TI + IS H+II GK+ I D DS NGT +N T L P ++
Sbjct: 179 SPFVIGR--ENADITIPETYISKIHVIISYKDGKYRIADYDSTNGTKVNGTKLRPKVYYE 236
Query: 86 LRENDTIKLGD 96
+R+ I+L +
Sbjct: 237 IRDGYEIELSE 247
>gi|453054368|gb|EMF01821.1| hypothetical protein H340_04413 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 180
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 87 KLVISEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGRWIVEDL 144
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 145 GSTNGTYLDRTRLTTPTPIPL 165
>gi|400976047|ref|ZP_10803278.1| hypothetical protein SPAM21_09008 [Salinibacterium sp. PAMC 21357]
Length = 172
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V G + G I P ++ IGR + + I+DD S+ H + + W +QDLD
Sbjct: 80 RLVIVSGSKEGLEISL-PDEQLTIGR-SSESGLVIRDDYTSTHHARLLRWADSWVVQDLD 137
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGTFL + TP L N IK+G
Sbjct: 138 STNGTFLAGQRVSVPTPIPL--NTPIKIG 164
>gi|392309838|ref|ZP_10272372.1| forkhead-associated protein [Pseudoalteromonas citrea NCIMB 1889]
Length = 318
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR D I G+S H IIE G W I+D+ S NG ++N + N P+ L EN
Sbjct: 21 IGRYKFNVDTLIDQPGVSRHHAIIELAQGNWLIRDV-STNGIWINDKKVDKNLPYQLCEN 79
Query: 90 DTIKLG 95
D I
Sbjct: 80 DKIDFA 85
>gi|309792306|ref|ZP_07686776.1| forkhead-associated protein [Oscillochloris trichoides DG-6]
gi|308225621|gb|EFO79379.1| forkhead-associated protein [Oscillochloris trichoides DG6]
Length = 160
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 16 SGETIEFKPGSKIRIGR------IVRGNDVTI---KDDGISSKHLIIESVSGKWTIQDLD 66
SG I + G ++ +GR I D+ + D G+S +H II G + ++DL
Sbjct: 63 SGRRINLEAGEELLVGRKDNQRGIFPDVDLGLDGGYDAGVSRRHAIITPDHGAYLLEDLS 122
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGTF+N + P +P ++ D ++ G
Sbjct: 123 SANGTFINGRRIAPQSPTPIQHGDELRFG 151
>gi|410694196|ref|YP_003624818.1| hypothetical protein; putative forkhead-associated (FHA) domain
[Thiomonas sp. 3As]
gi|294340621|emb|CAZ89011.1| hypothetical protein; putative forkhead-associated (FHA) domain
[Thiomonas sp. 3As]
Length = 130
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
++ IGR R N + + D +S H +++ G W I+DL S NGT+LN + + L
Sbjct: 22 RLHIGR-HRHNTIALPDPHVSGVHAVLQQTDGDWWIEDLGSTNGTWLNGKRINASI---L 77
Query: 87 RENDTIKLGDCT 98
DT+++G CT
Sbjct: 78 LPQDTLRIGGCT 89
>gi|260906998|ref|ZP_05915320.1| FHA domain-containing protein [Brevibacterium linens BL2]
Length = 172
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G + G+ + GR N + I DD SS H I + +G W ++DL S NGT
Sbjct: 86 GPLAGTLVTLS-GAPVTFGR-APDNTIVISDDFASSHHARIVASNGSWVLEDLGSTNGTI 143
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCT 98
++ + P ++P LR I +G T
Sbjct: 144 VDGS--PMHSPISLRIGTQITIGHTT 167
>gi|310822669|ref|YP_003955027.1| FHA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309395741|gb|ADO73200.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 580
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
G KL++ GP GE + +GR + + I+D +S H+++ V W + D
Sbjct: 49 GYKLVVSAGPMEGEEFVLLEDEYV-VGR-SKEAAICIQDSSVSRNHILLRRVDSGWMVSD 106
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
L S NGT +N + P L D + LGD M
Sbjct: 107 LGSGNGTLVNGEQITEEVP--LANGDIVTLGDTEVTFADM 144
>gi|443626004|ref|ZP_21110436.1| putative Secreted protein [Streptomyces viridochromogenes Tue57]
gi|443340428|gb|ELS54638.1| putative Secreted protein [Streptomyces viridochromogenes Tue57]
Length = 170
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 77 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 134
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 135 GSTNGTYLDRTRLTTPTPIPL 155
>gi|408829577|ref|ZP_11214467.1| forkhead-associated protein [Streptomyces somaliensis DSM 40738]
Length = 410
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H + + G W + D S NGT LN + P P P L++ D + +G
Sbjct: 341 VPPEDPGVSHRHAVFLRQPDGSWAVVDQSSTNGTTLNGSDEPIQPYVPVPLQDGDRVHVG 400
Query: 96 DCTTISV 102
TTI+V
Sbjct: 401 AWTTITV 407
>gi|255082740|ref|XP_002504356.1| predicted protein [Micromonas sp. RCC299]
gi|226519624|gb|ACO65614.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 10 MVRGPRSGETIEFKPGSKI-RIGRIVRGNDVTIK-DDGISSKHLIIESVSGKWTIQDLDS 67
++ GP +G +F P + + ++GR R + + IK D +S KH I +W I DL S
Sbjct: 30 VIEGPATG--TKFTPTADVLQVGR-TRSSQIYIKGDPAVSQKHASITWNGKQWRIVDLGS 86
Query: 68 CNGTFLNSTTLPPN-TPFDLRENDTIKLGDCTTISVQM 104
NGT +N L + P L + D + +G TT+ V +
Sbjct: 87 SNGTTVNDVELEEDGEPMALSDEDVVMVGTDTTVKVTI 124
>gi|219849727|ref|YP_002464160.1| serine/threonine protein kinase with FHA domain-containing protein
[Chloroflexus aggregans DSM 9485]
gi|219543986|gb|ACL25724.1| serine/threonine protein kinase with FHA domain protein
[Chloroflexus aggregans DSM 9485]
Length = 461
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSK-IRIGR------IVRGNDVTIKDDGISSK-HLIIES 55
P +LI VR P T E K K +RIGR D+ D GI+S+ H IIE
Sbjct: 356 PSARLI-VRSPY--RTWEVKLDHKLVRIGRRDPRQAHFPELDLAEHDRGIASRLHAIIER 412
Query: 56 VSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
++T+ D S NGT +N +PP P L+ D IK+GD
Sbjct: 413 RGDQYTLTDQQSTNGTQINGKLIPPRVPQPLKSGDLIKIGD 453
>gi|296164507|ref|ZP_06847078.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900107|gb|EFG79542.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 850
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
F G ++ +GR R DV I D IS HLI+ G+W D S NGT+LN +P
Sbjct: 20 SFAAGHEVVVGRDARA-DVRIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP- 77
Query: 81 NTPFDLRENDTIKLGD 96
D+ + +I +G+
Sbjct: 78 --VIDVHDGQSIHVGN 91
>gi|269954833|ref|YP_003324622.1| FHA domain containing protein [Xylanimonas cellulosilytica DSM
15894]
gi|269303514|gb|ACZ29064.1| FHA domain containing protein [Xylanimonas cellulosilytica DSM
15894]
Length = 170
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V GP G ++ GS I IGR G+ + + DD SS+H I G+W ++DL
Sbjct: 78 RLVVVAGPLQGTSLPLT-GSSILIGR-SPGSTLVLDDDYSSSRHARIFPQGGQWFVEDLG 135
Query: 67 SCNGTFLNSTTLPPNTPF 84
S NGTF+ L P
Sbjct: 136 STNGTFVGDEQLTGVMPL 153
>gi|73972751|ref|XP_864730.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 2 [Canis lupus
familiaris]
Length = 487
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVS 57
G + + R + E + + G+++ IGR G VT + IS H ++ ++V
Sbjct: 15 GRRWCLRRARMNAEWLLLEDGNEVTIGR---GFGVTYQLVSKICPLMISRNHCVLKQNVE 71
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 72 GQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|256370912|ref|YP_003108736.1| FHA domain-containing protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256007496|gb|ACU53063.1| FHA domain containing protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 219
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G +E PGS I IGR G DV I D+ +S +H + G T+ DL S NGTF+N
Sbjct: 136 GAPVELGPGSYI-IGR-QSGADVRIDDNRVSRRHAEVTIAEGTATVTDLGSTNGTFVNGE 193
Query: 77 TLPPNTPFDLRENDTIKLG 95
+ P +L+ D ++LG
Sbjct: 194 RVA--RPTELQAGDVLRLG 210
>gi|147678120|ref|YP_001212335.1| signaling protein [Pelotomaculum thermopropionicum SI]
gi|146274217|dbj|BAF59966.1| hypothetical signaling protein [Pelotomaculum thermopropionicum SI]
Length = 161
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 20 IEFKPGSKIRIGRIV-----RGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
+E PG IGR + G+D+ I+D S++H I G++ ++DL S NGTFLN
Sbjct: 66 LELLPGESFAIGREIIIGRGAGSDIRIRDSYTSTRHARIYFKEGQYWLEDLKSTNGTFLN 125
Query: 75 STTLPPNTPFDLRENDTIKLGDCT 98
L P L + D +++G T
Sbjct: 126 G--LQVGQPTVLADGDRLRIGGVT 147
>gi|148655978|ref|YP_001276183.1| protein kinase [Roseiflexus sp. RS-1]
gi|148568088|gb|ABQ90233.1| protein kinase [Roseiflexus sp. RS-1]
Length = 485
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 38 DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ D GI+S+H +I+ +T+ DL S NGT +N + LPP+ LR D IK+G+
Sbjct: 418 DLAEHDRGIASRHHAMIDRNGDHYTLVDLGSTNGTLVNGSPLPPHQKHHLRSGDRIKIGE 477
Query: 97 C 97
Sbjct: 478 V 478
>gi|41407429|ref|NP_960265.1| hypothetical protein MAP1331c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|440776931|ref|ZP_20955760.1| hypothetical protein D522_08818 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395781|gb|AAS03648.1| hypothetical protein MAP_1331c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|436722919|gb|ELP46805.1| hypothetical protein D522_08818 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 866
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
F G ++ +GR V+ DV I D IS HLI+ G+W D S NGT+LN +P
Sbjct: 20 SFAAGHEVVVGRHVQA-DVRIPDPRISRAHLILRFEQGRWLAIDNGSLNGTYLNGYRMP- 77
Query: 81 NTPFDLRENDTIKLGD 96
D+ + +I +G+
Sbjct: 78 --VVDIHDGQSIHVGN 91
>gi|357413402|ref|YP_004925138.1| forkhead-associated protein [Streptomyces flavogriseus ATCC 33331]
gi|320010771|gb|ADW05621.1| Forkhead-associated protein [Streptomyces flavogriseus ATCC 33331]
Length = 456
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT LN P P P L++ D + +G
Sbjct: 387 VPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTLNGAEDPIQPYVPVPLQDGDQVHVG 446
Query: 96 DCTTISV 102
TTI+V
Sbjct: 447 AWTTITV 453
>gi|312193985|ref|YP_004014046.1| FHA domain-containing protein [Frankia sp. EuI1c]
gi|311225321|gb|ADP78176.1| FHA domain containing protein [Frankia sp. EuI1c]
Length = 186
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
K+++ +GP +G I G I IGR + + + DD S +H + G+W ++DL+
Sbjct: 94 KVVVTKGPLAGTVIPLT-GEPITIGR-APDSTLVLDDDFASGRHARLVPHDGRWFVEDLN 151
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGTFL T + TP + +++G
Sbjct: 152 STNGTFLEHTKV--TTPMPVSLGAPVRIG 178
>gi|291242845|ref|XP_002741316.1| PREDICTED: ring finger protein 8-like [Saccoglossus kowalevskii]
Length = 606
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 35 RGNDVTIK---DD---GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
RG DVT++ D+ IS KH I + WT+ D S NG F+N + P P ++E
Sbjct: 33 RGLDVTVQLLPDEEPLMISRKHAIFQDNDNTWTVVDNKSINGIFINGKKIKPLKPHQVKE 92
Query: 89 NDTIKLG 95
ND +++G
Sbjct: 93 NDIVQIG 99
>gi|256075881|ref|XP_002574244.1| smad nuclear interacting protein [Schistosoma mansoni]
Length = 276
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSG--KWT 61
+L +G ++ + S IGR + D+ + IS +H +++ V G +
Sbjct: 164 WRLYAFKGNKTLSVLHIHRQSGFLIGRDRKIADIPMDHPSISKQHAVLQYRLVRGLIRLY 223
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
I DL+S NGT+LN+ + ++L E D IK G T V M + D+S
Sbjct: 224 IIDLESANGTYLNNNRIESRRYYELLEKDVIKFGFSTREYVVMTSETDMDDS 275
>gi|383636290|ref|ZP_09950696.1| hypothetical protein SchaN1_01959 [Streptomyces chartreusis NRRL
12338]
Length = 169
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 76 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 133
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ L TP L
Sbjct: 134 GSTNGTYLDRNRLTTPTPIAL 154
>gi|344999682|ref|YP_004802536.1| FHA domain containing protein [Streptomyces sp. SirexAA-E]
gi|344315308|gb|AEN09996.1| FHA domain containing protein [Streptomyces sp. SirexAA-E]
Length = 485
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H +++ G W + D +S NGT LN P P P L++ D + +G
Sbjct: 416 VPPEDPGVSHQHAVLVRQPDGSWAVVDQNSTNGTTLNGAEDPIQPYVPVPLQDGDQVHVG 475
Query: 96 DCTTISV 102
TTI+V
Sbjct: 476 AWTTITV 482
>gi|291438489|ref|ZP_06577879.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291341384|gb|EFE68340.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 169
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 76 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 133
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L P L
Sbjct: 134 GSTNGTYLDRTRLTTPMPISL 154
>gi|294630372|ref|ZP_06708932.1| FHA domain-containing protein [Streptomyces sp. e14]
gi|292833705|gb|EFF92054.1| FHA domain-containing protein [Streptomyces sp. e14]
Length = 172
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDQGGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ + L TP L
Sbjct: 137 GSTNGTYLDRSRLTTPTPIPL 157
>gi|353229544|emb|CCD75715.1| putative smad nuclear interacting protein [Schistosoma mansoni]
Length = 276
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSG--KWT 61
+L +G ++ + S IGR + D+ + IS +H +++ V G +
Sbjct: 164 WRLYAFKGNKTLSVLHIHRQSGFLIGRDRKIADIPMDHPSISKQHAVLQYRLVRGLIRLY 223
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
I DL+S NGT+LN+ + ++L E D IK G T V M + D+S
Sbjct: 224 IIDLESANGTYLNNNRIESRRYYELLEKDVIKFGFSTREYVVMTSETDMDDS 275
>gi|297193253|ref|ZP_06910651.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197720524|gb|EDY64432.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 170
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 77 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 134
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 135 GSTNGTYLDRTRLTTPTPIPL 155
>gi|338532567|ref|YP_004665901.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337258663|gb|AEI64823.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 177
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTI 62
+M+RG + E +P G + +GR V G + + D +S H L + +G ++
Sbjct: 62 FVMLRGFDALEVHFLRPEAEGQEFSVGR-VEGCSLVVPDPSVSKHHATLRWHAQAGDCSV 120
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
+D+ S NGT++N++ L P L + D + GD + ++ T+ + +A P R+
Sbjct: 121 RDVGSMNGTWVNASALGPEQEQMLNDGDALAFGDAQFLYLRTETLHAHLR-MASPGRD 177
>gi|88854519|ref|ZP_01129186.1| secreted protein [marine actinobacterium PHSC20C1]
gi|88816327|gb|EAR26182.1| secreted protein [marine actinobacterium PHSC20C1]
Length = 172
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V G + G I P ++ IGR + + I+DD S+ H + + W +QDLD
Sbjct: 80 RLVIVSGSKEGLEISL-PEEQLTIGR-SSESGLVIRDDYTSTHHARLLRWADSWVVQDLD 137
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGTFL + TP L N IK+G +
Sbjct: 138 STNGTFLAGQRVSVPTPIPL--NTPIKIGTTS 167
>gi|444917144|ref|ZP_21237248.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
gi|444711270|gb|ELW52217.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
Length = 540
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+L + G +G+ F+ S + IGR+ DV + D GIS +H I S + ++ ++D+
Sbjct: 3 FQLTIAEGKEAGKEFVFEQDS-VLIGRVAEC-DVVLYDAGISRRHCRIFSEADQYYVEDM 60
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGT +N T +P L E + LG
Sbjct: 61 GSSNGTRVNGTLVPVKEKLALDEGAQLSLG 90
>gi|262197139|ref|YP_003268348.1| Fis family transcriptional regulator [Haliangium ochraceum DSM
14365]
gi|262080486|gb|ACY16455.1| sigma54 specific transcriptional regulator, Fis family
[Haliangium ochraceum DSM 14365]
Length = 455
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KL++V+GP+ G T +IR+G+ GND+ + D+ +S +H I + + ++DL
Sbjct: 24 KLVVVKGPQRG-TEYLIAADRIRVGKAA-GNDLVVTDETVSREHFEIVRDAKGYLLRDLG 81
Query: 67 SCNGTFLN 74
S NGTFL+
Sbjct: 82 STNGTFLD 89
>gi|398807638|ref|ZP_10566514.1| FHA domain-containing protein [Variovorax sp. CF313]
gi|398089173|gb|EJL79701.1| FHA domain-containing protein [Variovorax sp. CF313]
Length = 217
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H ++ G+ I+DL+S NGT++N+ + L++ND +++G
Sbjct: 31 NDIVIDNLAVSGEHAVLHMSGGEVEIEDLNSTNGTYVNALAIQKQA---LKDNDVVEVGG 87
Query: 97 C 97
C
Sbjct: 88 C 88
>gi|345007992|ref|YP_004810346.1| FHA domain-containing protein [Streptomyces violaceusniger Tu 4113]
gi|344034341|gb|AEM80066.1| FHA domain containing protein [Streptomyces violaceusniger Tu 4113]
Length = 172
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 137 GSTNGTYLDRTRLTTPTPIAL 157
>gi|302559640|ref|ZP_07311982.1| FHA domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302477258|gb|EFL40351.1| FHA domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 170
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 77 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 134
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 135 GSTNGTYLDRTRLTTPTPISL 155
>gi|195053946|ref|XP_001993887.1| GH18607 [Drosophila grimshawi]
gi|193895757|gb|EDV94623.1| GH18607 [Drosophila grimshawi]
Length = 702
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 43 DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
DD S+ +L I S W I DL S +GTFLN LPP +R +KLG T + +
Sbjct: 123 DDVFSADNLPISDQSEGWYIYDLGSTHGTFLNKQRLPPRVYIRIRVGHMLKLGSSTRVYI 182
>gi|395768807|ref|ZP_10449322.1| hypothetical protein Saci8_03476 [Streptomyces acidiscabies 84-104]
Length = 179
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G W ++DL
Sbjct: 86 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGNWIVEDL 143
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
+S NGT+L+ T L TP L
Sbjct: 144 NSTNGTYLDRTRLTTPTPIPL 164
>gi|119498099|ref|XP_001265807.1| cytoplasm to vacuole targeting Vps64, putative [Neosartorya
fischeri NRRL 181]
gi|119413971|gb|EAW23910.1| cytoplasm to vacuole targeting Vps64, putative [Neosartorya
fischeri NRRL 181]
Length = 746
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGPRSGE--TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
EPP + L+ + G + T+ F P +RIGR V +G +S +H
Sbjct: 160 EPPAILTLLPINGTFEKKQITVPFYP-EVLRIGRQTNAKTVPTPLNGFFDSKVLSRQHAE 218
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I +GK I+D+ S NGTF+N L P + P +LRENDT++LG
Sbjct: 219 IWADKTGKIWIRDVKSSNGTFVNGQRLSPENRESEPHELRENDTLELG 266
>gi|430747291|ref|YP_007206420.1| diguanylate cyclase [Singulisphaera acidiphila DSM 18658]
gi|430019011|gb|AGA30725.1| diguanylate cyclase (GGDEF) domain-containing protein
[Singulisphaera acidiphila DSM 18658]
Length = 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN-TPFDLRENDTIKLGD 96
D+T+ D IS +H +ES G + I DL S NGTF+N +P N TP L + D ++LG
Sbjct: 61 DITVPDPSISRRHSRLESTGGGYRITDLQSTNGTFVND--VPANRTP--LTDGDYLRLGT 116
Query: 97 C 97
C
Sbjct: 117 C 117
>gi|108763135|ref|YP_629192.1| sensory box histidine kinase/response regulator [Myxococcus xanthus
DK 1622]
gi|108467015|gb|ABF92200.1| sensory box histidine kinase/response regulator [Myxococcus xanthus
DK 1622]
Length = 777
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 33 IVRGNDVTIK--DDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
I RG+DVT++ D G+S KH ++ + G + DLDS NGT LN P + +L E
Sbjct: 73 IGRGSDVTVRIDDHGVSRKHARVVRAGDGACHVTDLDSTNGTLLNGV---PVSTAELMEG 129
Query: 90 DTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVET 149
D +++G T + Q E + R A V G A SGR +
Sbjct: 130 DRLQIGTVTVFRFSKREVLEQRE---EQLRQALTAARV-GIWDWNAQSGRVTWSEQVDRL 185
Query: 150 LGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENLELEEGGEIESESKITKK 209
LGL G++ GR L E+ + +V LE+ +++ E +I +
Sbjct: 186 LGLPVGKLS----------GRAMELSEVVHPADLPRVSEVLGAALEKKTQVDVEYRIEPQ 235
Query: 210 GRG 212
G G
Sbjct: 236 GSG 238
>gi|115379234|ref|ZP_01466350.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310822225|ref|YP_003954583.1| FHA domain/tetratricopeptide repeat protein [Stigmatella aurantiaca
DW4/3-1]
gi|115363766|gb|EAU62885.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309395297|gb|ADO72756.1| FHA domain/tetratricopeptide repeat protein [Stigmatella aurantiaca
DW4/3-1]
Length = 746
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGT 71
GP + +T K K+ IGR + V ++DD IS KH +E GK ++DL S NGT
Sbjct: 168 GPWANKTFALK--GKLLIGRSPPAS-VLLEDDSISRKHAEVERTPQGKVMLRDLGSANGT 224
Query: 72 FLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN--PRRQANVPG 129
LN + P P +L D ++ G V+++ + + + +R P R+ G
Sbjct: 225 LLNGDVIGPE-PVELAPGDVLQFG-----MVEVVYEPGESDLPVRRERGGVPVRRDREAG 278
Query: 130 TSSVRATSGRKKAEAEPVETLGLEGGQI 157
S V+A SG + L + GG I
Sbjct: 279 KSEVKAASGEGGIPLKRKRLLAVAGGLI 306
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M ++VR P ET E + S+++IGR ND+ + + G+S +H + +G ++DL
Sbjct: 1 MPTLIVRHPDGSET-EHEFSSELKIGRH-ESNDLPLTEGGVSRQHARVFVENGDVLVEDL 58
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
+S NGT++++ + TP L + +GD
Sbjct: 59 NSSNGTYVDAGRVSDPTP--LTPQSQVVIGD 87
>gi|212715191|ref|ZP_03323319.1| hypothetical protein BIFCAT_00080 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661872|gb|EEB22447.1| hypothetical protein BIFCAT_00080 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 171
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ G+ I +GR N V + D+ +SS H + + +GKW ++DL
Sbjct: 79 LVIIDGPLAGSSVPLT-GNTITLGR-SASNTVVLDDEFVSSHHARVYTDPATGKWAVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N L N P L +++G T
Sbjct: 137 GSTNGTVVNQQRL--NAPMILGTRIPVRIGATT 167
>gi|346977316|gb|EGY20768.1| RING finger protein [Verticillium dahliae VdLs.17]
Length = 583
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKP--------GSKIRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P G IR+GR + V
Sbjct: 194 PSIRFSAYFDPRATRPSLSFSPVARTLPSGGETIRVGRYSERENQPAVPHNVPSAAPVGF 253
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 254 KSKVVSRRHCEFWYDQGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPINDGDIVQLG 311
>gi|357400669|ref|YP_004912594.1| hypothetical protein SCAT_3085 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356723|ref|YP_006054969.1| secreted protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337767078|emb|CCB75789.1| Secreted protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807231|gb|AEW95447.1| secreted protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 167
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 74 KLVISEGSLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 131
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 132 GSTNGTYLDRTRLTAPTPVPL 152
>gi|42522709|ref|NP_968089.1| large Ala/Glu-rich protein [Bdellovibrio bacteriovorus HD100]
gi|39573905|emb|CAE79082.1| large Ala/Glu-rich protein [Bdellovibrio bacteriovorus HD100]
Length = 794
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWT---IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
D+++ D+ IS HL+ VS +W I+D +S NGTF+N T + TP ++ +D I+L
Sbjct: 33 DLSLNDNNISRVHLV---VSRRWNQIWIEDKNSSNGTFINGTRIVQGTPVNVVPSDRIQL 89
Query: 95 GDCTTI 100
G I
Sbjct: 90 GRSEYI 95
>gi|158312004|ref|YP_001504512.1| FHA domain-containing protein [Frankia sp. EAN1pec]
gi|158107409|gb|ABW09606.1| FHA domain containing protein [Frankia sp. EAN1pec]
Length = 179
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ +G +G TI P I IGR + + ++DD S +H + G+W ++DL
Sbjct: 87 RLVVTKGHLAGTTIPLGP-EAITIGR-APDSTLVLEDDFASGRHARLVPHDGQWFVEDLG 144
Query: 67 SCNGTFLNST 76
S NGTFLN T
Sbjct: 145 STNGTFLNRT 154
>gi|5713126|gb|AAD47812.1| putative histidine protein kinase [Myxococcus xanthus DZ2]
Length = 768
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 33 IVRGNDVTIK--DDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
I RG+DVT++ D G+S KH ++ + G + DLDS NGT LN P + +L E
Sbjct: 64 IGRGSDVTVRIDDHGVSRKHARVVRAGDGACHVTDLDSTNGTLLNGV---PVSTAELMEG 120
Query: 90 DTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVET 149
D +++G T + Q E + R A V G A SGR +
Sbjct: 121 DRLQIGTVTVFRFSKREVLEQRE---EQLRQALTAARV-GIWDWNAQSGRVTWSEQVDRL 176
Query: 150 LGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENLELEEGGEIESESKITKK 209
LGL G++ GR L E+ + +V LE+ +++ E +I +
Sbjct: 177 LGLPVGKLS----------GRAMELSEVVHPADLPRVSEVLGAALEKKTQVDVEYRIEPQ 226
Query: 210 GRG 212
G G
Sbjct: 227 GSG 229
>gi|386841305|ref|YP_006246363.1| hypothetical protein SHJG_5222 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101606|gb|AEY90490.1| secreted protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|451794600|gb|AGF64649.1| secreted protein [Streptomyces hygroscopicus subsp. jinggangensis
TL01]
Length = 176
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W I+DL
Sbjct: 83 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIIEDL 140
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ + L TP L
Sbjct: 141 GSTNGTYLDRSRLTTPTPIPL 161
>gi|124265260|ref|YP_001019264.1| hypothetical protein Mpe_A0067 [Methylibium petroleiphilum PM1]
gi|124258035|gb|ABM93029.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 220
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H +++ V I+DL+S NGT++N + L+ NDT+++G
Sbjct: 31 NDIVIDNLAVSGEHAVLQMVGQDVFIEDLNSTNGTYINGKAVKKQL---LQHNDTVEIGK 87
Query: 97 CTTISVQMITMDSQDESVAKP---KRNPRRQANVP----------GTSSVR------ATS 137
+ + + D + + KP P Q P GTSS A
Sbjct: 88 YKIKYLSVESSDYEKTMIIKPGAAATAPNFQHTAPMSNTNFAALTGTSSALIKVLNGAAV 147
Query: 138 GRKKAEAEPVETLGLEGGQIEDQSR 162
GR+ A + V T+G G Q+ ++
Sbjct: 148 GREVALTKVVTTVGKPGVQVASITK 172
>gi|358368687|dbj|GAA85303.1| cytoplasm to vacuole targeting Vps64 [Aspergillus kawachii IFO
4308]
Length = 746
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTF 72
+ F P +RIGR V +G +S +H I SGK I+D+ S NGTF
Sbjct: 182 VPFYPD-LLRIGRQTNAKTVPTPVNGYFDSKVLSRQHAEIWADKSGKIWIRDVKSSNGTF 240
Query: 73 LNSTTLPP----NTPFDLRENDTIKLG 95
+N L P + P +LRENDT++LG
Sbjct: 241 VNGQRLSPENRESEPHELRENDTLELG 267
>gi|254392344|ref|ZP_05007527.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294813779|ref|ZP_06772422.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326442200|ref|ZP_08216934.1| hypothetical protein SclaA2_14099 [Streptomyces clavuligerus ATCC
27064]
gi|197706014|gb|EDY51826.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294326378|gb|EFG08021.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 182
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 89 KLVVSEGSLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 146
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 147 GSTNGTYLDRTRLTTPTPIPL 167
>gi|108757246|ref|YP_631311.1| FHA domain- TPR-repeat-containing protein [Myxococcus xanthus DK
1622]
gi|108461126|gb|ABF86311.1| FHA domain/tetratricopeptide repeat protein [Myxococcus xanthus DK
1622]
Length = 743
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G+T K K+ +GR + + DD +S +H +E+ S T++DL S NGT
Sbjct: 181 GPWAGQTYPLK--GKVLVGRQPPAG-IMLDDDSVSRRHAELEATSSGVTVRDLGSANGTL 237
Query: 73 LNSTTLPPNTPFDLRENDTIKLG 95
LN L TP L D ++ G
Sbjct: 238 LNGEPL-DQTPVPLEPGDQLQFG 259
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M ++VR P E EF +++IGR +G+D+ I + G+S H + G I+D+
Sbjct: 1 MATLVVRHPDGTEN-EFAITGELKIGR-QQGSDILITEGGVSRTHARVFDEGGTVFIEDV 58
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
S NGTF++ + P L + LGD
Sbjct: 59 GSANGTFVDGQRI--MEPTALTPQSEVLLGD 87
>gi|338530478|ref|YP_004663812.1| sensory box histidine kinase/response regulator [Myxococcus fulvus
HW-1]
gi|337256574|gb|AEI62734.1| sensory box histidine kinase/response regulator [Myxococcus fulvus
HW-1]
Length = 768
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 20/183 (10%)
Query: 33 IVRGNDVTIK--DDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
I RG+DVT++ D G+S KH I+ + G + DLDS NGT LN P + +L E
Sbjct: 64 IGRGSDVTVRIDDHGVSRKHARIVRTGDGACHVTDLDSTNGTLLNGV---PVSTAELMEG 120
Query: 90 DTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVET 149
D +++G T + Q E + R A V G A SGR +
Sbjct: 121 DRLQIGTVTVFRFSKREVLEQRE---EQLRQALSAARV-GIWDWNAQSGRVTWSEQVDRL 176
Query: 150 LGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENLELEEGGEIESESKITKK 209
LGL G++ GR L E+ + +V LE+ +++ E +I +
Sbjct: 177 LGLPVGKLS----------GRAMELSEVVHPADLPRVGEVLGAALEKKTQVDVEYRIEPQ 226
Query: 210 GRG 212
G G
Sbjct: 227 GSG 229
>gi|398784366|ref|ZP_10547630.1| FHA domain-containing protein [Streptomyces auratus AGR0001]
gi|396995289|gb|EJJ06307.1| FHA domain-containing protein [Streptomyces auratus AGR0001]
Length = 176
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 83 KLVVSEGSLTGTTVALQ-GQTISLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 140
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 141 GSTNGTYLDRTRLTTPTPIPL 161
>gi|438001332|ref|YP_007271075.1| FHA-domain-containing proteins [Tepidanaerobacter acetatoxydans
Re1]
gi|432178126|emb|CCP25099.1| FHA-domain-containing proteins [Tepidanaerobacter acetatoxydans
Re1]
Length = 145
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 46 ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ISSKH +I K IQDL+S NGTFLN + P L+END I+LG
Sbjct: 77 ISSKHALIAKRGSKLVIQDLNSTNGTFLNGKKIKK--PVRLKENDEIRLG 124
>gi|219850572|ref|YP_002465005.1| FHA domain-containing protein [Chloroflexus aggregans DSM 9485]
gi|219544831|gb|ACL26569.1| FHA domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 172
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGR------IVRGNDVTI---KDDGISSKHLIIE 54
P + L+++ SG I ++I IGR D ++ D G+S +H I
Sbjct: 65 PTVALVVLS---SGRRITLPVTAEILIGRKDQQRSFFPDVDFSLDGGYDAGVSRRHARII 121
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+G + ++DL S NGTFLN +PP P L+ D ++ G
Sbjct: 122 CQNGTYMLEDLGSSNGTFLNRQRVPPGQPMLLKHGDEVQFG 162
>gi|319796534|ref|YP_004158174.1| forkheaD-associated protein [Variovorax paradoxus EPS]
gi|315598997|gb|ADU40063.1| Forkhead-associated protein [Variovorax paradoxus EPS]
Length = 217
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H ++ G+ I+DL+S NGT++N+ + T L +ND I++G
Sbjct: 31 NDIVIDNLAVSGEHAVLHMSDGEVQIEDLNSTNGTYVNALAVQKQT---LEDNDVIEVGG 87
Query: 97 C 97
C
Sbjct: 88 C 88
>gi|329938610|ref|ZP_08288006.1| FHA domain-containing protein [Streptomyces griseoaurantiacus M045]
gi|329302101|gb|EGG45993.1| FHA domain-containing protein [Streptomyces griseoaurantiacus M045]
Length = 173
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 80 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 137
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 138 GSTNGTYLDRTRLTTPTPIPL 158
>gi|297200970|ref|ZP_06918367.1| secreted protein [Streptomyces sviceus ATCC 29083]
gi|197712251|gb|EDY56285.1| secreted protein [Streptomyces sviceus ATCC 29083]
Length = 170
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 77 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 134
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 135 GSTNGTYLDRTRLTTPTPVPL 155
>gi|386386332|ref|ZP_10071498.1| hypothetical protein STSU_24051 [Streptomyces tsukubaensis
NRRL18488]
gi|385666235|gb|EIF89812.1| hypothetical protein STSU_24051 [Streptomyces tsukubaensis
NRRL18488]
Length = 120
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S KH ++++ G W + D +S NGT LN P P P L + D + +G
Sbjct: 51 VPPEDPGVSHKHAVLVQQSDGSWAVVDQNSTNGTTLNGAEEPIQPYVPVPLNDGDRVHVG 110
Query: 96 DCTTISVQ 103
TTI++
Sbjct: 111 AWTTITIH 118
>gi|148657490|ref|YP_001277695.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148569600|gb|ABQ91745.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 230
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGK 59
ME P L ++ GPR G + S +GR N +++ D ISS H I+E +
Sbjct: 1 MEKP--HLTVISGPRQGMQVSMD-VSPFTLGRGT-DNTLSLPDPTISSHHARIVEHIGLY 56
Query: 60 WTIQDLDSCNGTFLNSTTLPP---------NTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
W ++DL S NGT+ LPP + P L E I+LG TT+ V+ + Q
Sbjct: 57 W-LEDLGSTNGTYF----LPPRGEEFRLAKDKPVLLVEGARIRLGGHTTLQVEGMVASQQ 111
Query: 111 DES 113
D +
Sbjct: 112 DAT 114
>gi|350635737|gb|EHA24098.1| hypothetical protein ASPNIDRAFT_200066 [Aspergillus niger ATCC
1015]
Length = 748
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTF 72
+ F P +RIGR V +G +S +H I SGK I+D+ S NGTF
Sbjct: 182 VPFYP-DLLRIGRQTNAKTVPTPVNGYFDSKVLSRQHAEIWADKSGKIWIRDVKSSNGTF 240
Query: 73 LNSTTLPP----NTPFDLRENDTIKLG 95
+N L P + P +LRENDT++LG
Sbjct: 241 VNGQRLSPENRESEPHELRENDTLELG 267
>gi|134076191|emb|CAK49004.1| unnamed protein product [Aspergillus niger]
Length = 662
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTF 72
+ F P +RIGR V +G +S +H I SGK I+D+ S NGTF
Sbjct: 182 VPFYP-DLLRIGRQTNAKTVPTPVNGYFDSKVLSRQHAEIWADKSGKIWIRDVKSSNGTF 240
Query: 73 LNSTTLPP----NTPFDLRENDTIKLG 95
+N L P + P +LRENDT++LG
Sbjct: 241 VNGQRLSPENRESEPHELRENDTLELG 267
>gi|301779427|ref|XP_002925129.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Ailuropoda
melanoleuca]
Length = 487
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 1 MEPPGMKLIMVRGPRS-------------GETIEFKPGSKIRIGRIVRGNDVTIKDDG-- 45
ME PG+ +V G R+ E + + G+++ IGR G VT +
Sbjct: 1 MEEPGL---LVTGDRARGRSWCLRRVGMNAEWLVLEEGNEVTIGR---GFGVTYQLVSKI 54
Query: 46 ----ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++V G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 55 CPLMISRNHCVLKQNVQGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|405375905|ref|ZP_11029922.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397085859|gb|EJJ17032.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 176
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTI 62
L M+R + E +P G ++ +GR D+ + D +S H L + G +++
Sbjct: 60 LAMLRDFDNLEVHFLQPSVDGEELTVGR-TEDCDLMVPDPSVSQHHATLRWNATRGGFSV 118
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNP 121
+D +S NGTF+N L L++ DT+ GD + ++ T+ + +A PKR P
Sbjct: 119 RDAESMNGTFINGAPLAYRAQVQLQDGDTLAFGDAQFLYLRAETV-YEHLRLASPKRAP 176
>gi|402086179|gb|EJT81077.1| RING finger protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 746
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSG-ETIEFKPGSK--------IRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P S+ IR+GR + V
Sbjct: 310 PSIRFSTFYDPRATRPSLTFSPVSRTLPTGTEVIRVGRYSERDAQPNVPVNVPSAAPVGF 369
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 370 KSKVVSRRHCEFWHEGGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPINDGDIVQLG 427
>gi|149925096|ref|ZP_01913407.1| FHA/GGDEF domain protein [Plesiocystis pacifica SIR-1]
gi|149814024|gb|EDM73657.1| FHA/GGDEF domain protein [Plesiocystis pacifica SIR-1]
Length = 307
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
++++ G R GE G + IGR + DV I D+GIS H +E G + + D S
Sbjct: 28 VVVLAGDRMGEMFPLNEG-RTSIGRGLHA-DVRINDEGISRSHAQVEHEDGHYYLSDAGS 85
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAK 116
NGTF N + + L+E D I++G + + + D DE +
Sbjct: 86 TNGTFANGERVD---RYPLKEGDKIQIGASSVL--RFTYHDDIDEDFQR 129
>gi|386347192|ref|YP_006045441.1| FHA domain-containing protein [Spirochaeta thermophila DSM 6578]
gi|339412159|gb|AEJ61724.1| FHA domain containing protein [Spirochaeta thermophila DSM 6578]
Length = 114
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+KI IGR NDV I + S H I+ + ++ ++DL+S NGT LN +PP+
Sbjct: 39 TKITIGR-ASDNDVVIDNKLASRYHAFIQKIKNEYFLKDLNSTNGTHLNGVRIPPDKYVK 97
Query: 86 LRENDTIKLGDCTTI 100
L D + +G I
Sbjct: 98 LAPGDVVTIGKTNLI 112
>gi|453050578|gb|EME98112.1| hypothetical protein H340_23111 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 298
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H +++E G W + D DS NGT +N + P P P L + D + +G T
Sbjct: 232 EDPGVSHQHAVLVEQPDGGWAVVDQDSTNGTTINGSEEPIQPYVPVPLHDGDRVHVGAWT 291
Query: 99 TISVQ 103
TI+V+
Sbjct: 292 TITVR 296
>gi|71043656|ref|NP_001020898.1| E3 ubiquitin-protein ligase RNF8 [Rattus norvegicus]
gi|123782072|sp|Q4KLN8.1|RNF8_RAT RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|68534363|gb|AAH99079.1| Ring finger protein 8 [Rattus norvegicus]
Length = 487
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + GS++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 28 EWLQLEAGSEVTIGR---GFSVTYQLISKVCPLMISRNHCVLKQNPEGQWTIMDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 85 VWLNRERLAPLQGYCIRKGDHIQLG 109
>gi|420236448|ref|ZP_14740931.1| hypothetical protein A200_01426 [Parascardovia denticolens IPLA
20019]
gi|391880275|gb|EIT88769.1| hypothetical protein A200_01426 [Parascardovia denticolens IPLA
20019]
Length = 201
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 8 LIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L ++ GP SG T GS+ I IGR N V +KD+ SS H + I+ SG+W I+D
Sbjct: 109 LTIIDGPLSGTTYTL--GSQPITIGR-APDNTVILKDEFASSHHARVYIDPTSGRWAIED 165
Query: 65 LDSCNGTFLN 74
L S NGT ++
Sbjct: 166 LGSTNGTVVD 175
>gi|317030022|ref|XP_001391712.2| cytoplasm to vacuole targeting Vps64 [Aspergillus niger CBS 513.88]
Length = 692
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTF 72
+ F P +RIGR V +G +S +H I SGK I+D+ S NGTF
Sbjct: 182 VPFYP-DLLRIGRQTNAKTVPTPVNGYFDSKVLSRQHAEIWADKSGKIWIRDVKSSNGTF 240
Query: 73 LNSTTLPP----NTPFDLRENDTIKLG 95
+N L P + P +LRENDT++LG
Sbjct: 241 VNGQRLSPENRESEPHELRENDTLELG 267
>gi|294812672|ref|ZP_06771315.1| FHA domain protein [Streptomyces clavuligerus ATCC 27064]
gi|294325271|gb|EFG06914.1| FHA domain protein [Streptomyces clavuligerus ATCC 27064]
Length = 324
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S KH +++ G W + D +S NGT LN P P P L + D + +G
Sbjct: 255 VPPEDPGVSHKHAVLMRQADGSWAVIDQNSTNGTTLNGGEEPIQPYVPVPLNDGDRVHVG 314
Query: 96 DCTTISV 102
TTI++
Sbjct: 315 AWTTITI 321
>gi|168698959|ref|ZP_02731236.1| sensor protein atoS [Gemmata obscuriglobus UQM 2246]
Length = 572
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+LI++RG G+ E S + +GR N V + D +S +HL + +V+ + ++DL
Sbjct: 3 RLIVIRGVDEGKQFELTSPS-VTVGRH-SANAVPLHDTQVSRRHLEVRAVAHGYELRDLG 60
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
S NGT LN P LR DTI +G SV M T
Sbjct: 61 SGNGTLLNGQ---PVQVAPLRSGDTITVGQ----SVLMFT 93
>gi|434398869|ref|YP_007132873.1| FHA domain containing protein [Stanieria cyanosphaera PCC 7437]
gi|428269966|gb|AFZ35907.1| FHA domain containing protein [Stanieria cyanosphaera PCC 7437]
Length = 330
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 29 RIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
+IGR++ ND+ D +S H IIE + IQDL+S N TF+N + + L+E
Sbjct: 24 KIGRLL-DNDIVFSDSSVSRHHAIIEVKPNQTIIQDLNSKNHTFVNEVEI---SQVILQE 79
Query: 89 NDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
D I G+ T +T D S+ KP+ N
Sbjct: 80 GDLISFGNVT------LTYD----SIYKPQVN 101
>gi|91795071|ref|YP_564722.1| forkhead-associated [Shewanella denitrificans OS217]
gi|91717073|gb|ABE56999.1| FHA domain protein [Shewanella denitrificans OS217]
Length = 318
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
GR+ D + D +S HL+IE +SG W DL S NG+FLN L N L
Sbjct: 20 FGRLPAAVDTALSDKTVSRMHLLIEYISGCWQALDL-SRNGSFLNGEKLAKNQRVKLSIG 78
Query: 90 DTIKLG 95
D I LG
Sbjct: 79 DVISLG 84
>gi|407982617|ref|ZP_11163289.1| ABC transporter family protein [Mycobacterium hassiacum DSM
44199]
gi|407375805|gb|EKF24749.1| ABC transporter family protein [Mycobacterium hassiacum DSM
44199]
Length = 877
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + +GR +R DV I IS HL++ G+W D S NG +LN
Sbjct: 15 GSTRSFAPGNDVVVGRDLRA-DVRIAHPLISRAHLVVRFDQGRWVAIDNGSLNGVYLNGR 73
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+ + DL + + LG+
Sbjct: 74 RV---STIDLHDGQRVNLGN 90
>gi|281344018|gb|EFB19602.1| hypothetical protein PANDA_014569 [Ailuropoda melanoleuca]
Length = 482
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 1 MEPPGMKLIMVRGPRS-------------GETIEFKPGSKIRIGRIVRGNDVTIKDDG-- 45
ME PG+ +V G R+ E + + G+++ IGR G VT +
Sbjct: 1 MEEPGL---LVTGDRARGRSWCLRRVGMNAEWLVLEEGNEVTIGR---GFGVTYQLVSKI 54
Query: 46 ----ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++V G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 55 CPLMISRNHCVLKQNVQGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|315225806|ref|ZP_07867594.1| FHA domain protein [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|315119938|gb|EFT83070.1| FHA domain protein [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 202
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 8 LIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L ++ GP SG T GS+ I IGR N V +KD+ SS H + I+ SG+W I+D
Sbjct: 110 LTIIDGPLSGTTYTL--GSQPITIGR-APDNTVILKDEFASSHHARVYIDPTSGRWAIED 166
Query: 65 LDSCNGTFLN 74
L S NGT ++
Sbjct: 167 LGSTNGTVVD 176
>gi|433645999|ref|YP_007291001.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium smegmatis JS623]
gi|433295776|gb|AGB21596.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium smegmatis JS623]
Length = 871
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + +GR +R DV + + IS HL++ G+W D S NG ++N
Sbjct: 15 GSTRTFSPGNDVVVGRDLRA-DVRVGNPLISRAHLVLRFDQGRWVAIDNGSLNGLYVNGH 73
Query: 77 TLPPNTPFDLRENDTIKLG--DCTTISVQM------ITMDSQDESVAKPKR 119
+P D+R+ + +G D +S ++ M Q SVA P R
Sbjct: 74 RVPTA---DIRDGMQVNIGNPDGPGLSFEVGRHQGSAGMPPQTTSVAVPSR 121
>gi|374989818|ref|YP_004965313.1| hypothetical protein SBI_07062 [Streptomyces bingchenggensis BCW-1]
gi|297160470|gb|ADI10182.1| hypothetical protein SBI_07062 [Streptomyces bingchenggensis BCW-1]
Length = 225
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H ++++ G W + D DS NGT +N P P P L++ D + +G T
Sbjct: 159 EDPGVSHQHAVLVQQPDGGWAVVDQDSTNGTTINGGEDPIQPYVPIPLQDGDRVHVGAWT 218
Query: 99 TISV 102
TI+V
Sbjct: 219 TITV 222
>gi|449301805|gb|EMC97814.1| hypothetical protein BAUCODRAFT_67140, partial [Baudoinia
compniacensis UAMH 10762]
Length = 304
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 20/104 (19%)
Query: 11 VRGPRSGETIEFKPGSKIRIGR----------IVRGND-----VTIKDDGISSKHLIIES 55
+ P + T++ P + +R+GR I G D V K +S +H
Sbjct: 71 LHFPATSRTLK-HPTAIVRVGRFSERDNTLSQIQGGGDPSNLPVGFKSKVVSRRHCEFWC 129
Query: 56 VSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+G+W I+D+ S +GTFLN L P + PF++ + DT++LG
Sbjct: 130 TNGQWYIKDVKSSSGTFLNHVRLSPPGQESRPFEVNDGDTVQLG 173
>gi|294786272|ref|ZP_06751526.1| putative FHA domain protein [Parascardovia denticolens F0305]
gi|294485105|gb|EFG32739.1| putative FHA domain protein [Parascardovia denticolens F0305]
Length = 201
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 8 LIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L ++ GP SG T GS+ I IGR N V +KD+ SS H + I+ SG+W I+D
Sbjct: 109 LTIIDGPLSGTTYTL--GSQPITIGR-APDNTVILKDEFASSHHARVYIDPTSGRWAIED 165
Query: 65 LDSCNGTFLN 74
L S NGT ++
Sbjct: 166 LGSTNGTVVD 175
>gi|383823662|ref|ZP_09978851.1| transmembrane ABC transporter ATP-binding protein [Mycobacterium
xenopi RIVM700367]
gi|383338652|gb|EID17015.1| transmembrane ABC transporter ATP-binding protein [Mycobacterium
xenopi RIVM700367]
Length = 869
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F PG + IGR +R D+ I IS HL++ G+W D S NGTF+N +P
Sbjct: 13 FAPGHDVVIGRDLRA-DMRITHPLISRAHLLLRYDQGRWLAIDNGSLNGTFVNGRRVP-- 69
Query: 82 TPFDLRENDTIKLGD 96
D+ + +I +G+
Sbjct: 70 -VVDIHDGQSINIGN 83
>gi|254383315|ref|ZP_04998667.1| secreted protein [Streptomyces sp. Mg1]
gi|194342212|gb|EDX23178.1| secreted protein [Streptomyces sp. Mg1]
Length = 167
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 74 KLVVSEGTLTGTTVALA-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 131
Query: 66 DSCNGTFLNSTTLPPNTPF 84
S NGT+L+ T L TP
Sbjct: 132 GSTNGTYLDRTRLTTPTPI 150
>gi|383818227|ref|ZP_09973525.1| multidrug ABC transporter ATPase [Mycobacterium phlei RIVM601174]
gi|383339472|gb|EID17808.1| multidrug ABC transporter ATPase [Mycobacterium phlei RIVM601174]
Length = 862
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PGS + +GR +R DV I IS HL++ G+W D S NG F+N+
Sbjct: 15 GSTRTFAPGSDVVVGRDLRA-DVRIAHPLISRAHLVLRFDQGRWIAIDNGSLNGLFVNNR 73
Query: 77 TLP 79
+P
Sbjct: 74 RVP 76
>gi|302423997|ref|XP_003009825.1| RING finger protein [Verticillium albo-atrum VaMs.102]
gi|261361659|gb|EEY24087.1| RING finger protein [Verticillium albo-atrum VaMs.102]
Length = 427
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKP--------GSKIRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P G IR+GR + V
Sbjct: 38 PSIRFSAYFDPRATRPSLSFSPVARTLPSGGETIRVGRYSERENQPAVPHNVPSAAPVGF 97
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 98 KSKVVSRRHCEFWYDQGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPINDGDIVQLG 155
>gi|357412407|ref|YP_004924143.1| FHA domain-containing protein [Streptomyces flavogriseus ATCC
33331]
gi|320009776|gb|ADW04626.1| FHA domain containing protein [Streptomyces flavogriseus ATCC
33331]
Length = 172
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 137 GSTNGTYLDRTRLTTPTPVPL 157
>gi|21222253|ref|NP_628032.1| hypothetical protein SCO3844 [Streptomyces coelicolor A3(2)]
gi|289770543|ref|ZP_06529921.1| secreted protein [Streptomyces lividans TK24]
gi|5102796|emb|CAB45211.1| putative secreted protein [Streptomyces coelicolor A3(2)]
gi|289700742|gb|EFD68171.1| secreted protein [Streptomyces lividans TK24]
Length = 172
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I +G+W ++DL
Sbjct: 79 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDQNGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPF 84
S NGT+L+ L TP
Sbjct: 137 GSTNGTYLDRARLTTPTPI 155
>gi|326500952|dbj|BAJ95142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 564
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSK----IRIGRIVRGNDVTIKDDGISSKHLIIESVSG--K 59
+ L ++ GP G + G+ + +GRI + +D+ KD +S KH I+ +
Sbjct: 161 LTLEVIAGPSHGINRYLQSGNTSMLPMTLGRIPQ-SDLVFKDSEVSGKHARIDWNQNTLR 219
Query: 60 WTIQDLDSCNGTFLNSTTLP-PNT-------PFDLRENDTIKLGDCTTISVQMITMDSQ 110
W + D+ S NGTFLNS + P+ P +L + D I LG + +SVQ+ + Q
Sbjct: 220 WELVDMGSLNGTFLNSQAVAHPDVGSRRWSEPAELADGDIITLGSSSKVSVQISLQNQQ 278
>gi|443627458|ref|ZP_21111845.1| hypothetical protein STVIR_5750 [Streptomyces viridochromogenes
Tue57]
gi|443338990|gb|ELS53245.1| hypothetical protein STVIR_5750 [Streptomyces viridochromogenes
Tue57]
Length = 254
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W I D +S NGT +N P P P L++ D + +G
Sbjct: 185 VPPEDPGVSHQHAVLVQQPDGSWAIVDQNSTNGTTVNGAEEPITPFVPVPLQDGDRVHVG 244
Query: 96 DCTTISV 102
TTI+V
Sbjct: 245 AWTTITV 251
>gi|429195111|ref|ZP_19187162.1| FHA domain protein [Streptomyces ipomoeae 91-03]
gi|428669165|gb|EKX68137.1| FHA domain protein [Streptomyces ipomoeae 91-03]
Length = 172
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ L TP L
Sbjct: 137 GSTNGTYLDRNRLTTPTPIPL 157
>gi|300814567|ref|ZP_07094821.1| FHA domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511335|gb|EFK38581.1| FHA domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 146
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
+ G + +GR + ND+ IKD +S HL I + + ++DL+S NGT+LN +
Sbjct: 64 YLLGGSVTLGRSSK-NDIVIKDKFVSKNHLNITERNEIFYLEDLNSANGTYLNGEKVDAG 122
Query: 82 TPFDLRENDTIKLGDCTTISVQ 103
T +L+ D I +G I V+
Sbjct: 123 TLIELQNGDKIGVGFIQFIFVE 144
>gi|226485789|emb|CAX75314.1| Smad nuclear-interacting protein 1 [Schistosoma japonicum]
Length = 277
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSG--KWT 61
+L +G ++ + S IGR + D+ + IS +H +++ V G +
Sbjct: 165 WRLYAFKGNKTLSILHIHRQSGFLIGRDRKVADIPMDHPSISKQHAVLQYRLVRGLIRLY 224
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
I DL+S NGT+LN+ + ++L E D IK G T V M + D+S
Sbjct: 225 IIDLESANGTYLNNNRIESRRYYELLEKDVIKFGFSTREYVFMTSETDIDDS 276
>gi|271961718|ref|YP_003335914.1| FHA domain-containing protein [Streptosporangium roseum DSM 43021]
gi|270504893|gb|ACZ83171.1| FHA domain containing protein-like protein [Streptosporangium
roseum DSM 43021]
Length = 155
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVT--IKDDGISSKHLIIESVSGKWTIQD 64
+++++ GP G TI + I IGR ND T + DD SS+H + G+W ++D
Sbjct: 63 QMVVIGGPLQGTTITLS-ETPITIGR---ANDATLVVSDDYASSRHARLFPQDGQWIVED 118
Query: 65 LDSCNGTFLNSTTLPPNTPFDL 86
L S NGT+L+ + + TP L
Sbjct: 119 LGSTNGTYLDRSKVTRPTPVPL 140
>gi|338534292|ref|YP_004667626.1| FHA domain- TPR-repeat-containing protein [Myxococcus fulvus HW-1]
gi|337260388|gb|AEI66548.1| FHA domain- TPR-repeat-containing protein [Myxococcus fulvus HW-1]
Length = 738
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 20/111 (18%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGND----VTIKDDGISSKHLIIESVSGKWTIQDLDSC 68
GP +G+T + G+++ G + ++DD +S +H +E + T++DL S
Sbjct: 179 GPWAGQTYPLR-------GKVIVGRQPPAVILLEDDSVSRRHAELEVTAAGVTVKDLGSA 231
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
NGT LN L TP L D ++ G ++ M + E+ A P R
Sbjct: 232 NGTLLNGDPL-DQTPVPLEPGDQLQFG--------VVEMTFEAEASAAPMR 273
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M ++VR P E EF +++IGR +G+D+ I + G+S H + G I D+
Sbjct: 1 MATLVVRHPDGTEN-EFAIAGELKIGR-QQGSDILITEGGVSRTHARVFEEGGAVFIDDV 58
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
S NGTF++ + P L + LGD
Sbjct: 59 GSANGTFVDGQRI--MAPTALTPQSEVLLGD 87
>gi|345000832|ref|YP_004803686.1| FHA domain containing protein [Streptomyces sp. SirexAA-E]
gi|344316458|gb|AEN11146.1| FHA domain containing protein [Streptomyces sp. SirexAA-E]
Length = 172
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 137 GSTNGTYLDRTRLTTPTPVPL 157
>gi|392545845|ref|ZP_10292982.1| forkhead-associated protein [Pseudoalteromonas rubra ATCC 29570]
Length = 318
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
GR D + GIS H IIE + W I+D+ S NG ++N + N P+ L EN
Sbjct: 21 FGRYKFNVDTFVDKPGISRHHAIIEHANNTWLIRDV-STNGIWINDKKIDKNLPYQLSEN 79
Query: 90 DTIKLG 95
D I
Sbjct: 80 DKIDFA 85
>gi|403222385|dbj|BAM40517.1| uncharacterized protein TOT_020000772 [Theileria orientalis strain
Shintoku]
Length = 212
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ----DLDSCNGTFLNSTTLPPNTPFD 85
IG+ R D+++ IS +H +I+ I DL+S NGTFLN L + ++
Sbjct: 129 IGKDDRIADISLYHPSISKQHAVIQYRKMDEEIIPYLIDLNSTNGTFLNDVKLESSKYYE 188
Query: 86 LRENDTIKLGDCT 98
LRE D IK G T
Sbjct: 189 LREKDIIKFGYST 201
>gi|226470432|emb|CAX70496.1| Smad nuclear-interacting protein 1 [Schistosoma japonicum]
gi|226470434|emb|CAX70497.1| Smad nuclear-interacting protein 1 [Schistosoma japonicum]
gi|226485791|emb|CAX75315.1| Smad nuclear-interacting protein 1 [Schistosoma japonicum]
Length = 277
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSG--KWT 61
+L +G ++ + S IGR + D+ + IS +H +++ V G +
Sbjct: 165 WRLYAFKGNKTLSILHIHRQSGFLIGRDRKVADIPMDHPSISKQHAVLQYRLVRGLIRLY 224
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
I DL+S NGT+LN+ + ++L E D IK G T V M + D+S
Sbjct: 225 IIDLESANGTYLNNNRIESRRYYELLEKDVIKFGFSTREYVVMTSETDIDDS 276
>gi|29830885|ref|NP_825519.1| hypothetical protein SAV_4342 [Streptomyces avermitilis MA-4680]
gi|29607998|dbj|BAC72054.1| putative membrane protein [Streptomyces avermitilis MA-4680]
Length = 175
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 82 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 139
Query: 66 DSCNGTFLNSTTLPPNTPF 84
S NGT+L+ T L TP
Sbjct: 140 GSTNGTYLDRTRLTTPTPI 158
>gi|406864603|gb|EKD17647.1| FHA domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 267
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE----------- 54
KL + +G ETI S +G+ V D+ + +S +H +I+
Sbjct: 152 WKLFVFKGSDILETINLSLRSCWLVGKEVAVVDMAAEHPSVSRQHAVIQFRYIEKKNEFG 211
Query: 55 SVSGKW--TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+G+ + DL+S NGT LN +PP+ +L++ D I+ G T V M++
Sbjct: 212 DKTGRVRPYLIDLESANGTLLNKENIPPSRYLELKDKDMIQFGHSTREYVLMLS 265
>gi|87307344|ref|ZP_01089489.1| hypothetical protein DSM3645_17515 [Blastopirellula marina DSM
3645]
gi|87290084|gb|EAQ81973.1| hypothetical protein DSM3645_17515 [Blastopirellula marina DSM
3645]
Length = 401
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + GP +G+ I G I++GR + D +S H +E V + + DL S
Sbjct: 5 LNIYAGPSAGQRIWIGDGQTIKVGRTHAAEFLIPGDPHVSGLHFAVELVDDQLMLTDLKS 64
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+LN L P L + D + +G
Sbjct: 65 RNGTYLNGERL--TQPVALHDGDVVTVG 90
>gi|326441174|ref|ZP_08215908.1| hypothetical protein SclaA2_08909 [Streptomyces clavuligerus ATCC
27064]
Length = 456
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S KH +++ G W + D +S NGT LN P P P L + D + +G
Sbjct: 387 VPPEDPGVSHKHAVLMRQADGSWAVIDQNSTNGTTLNGGEEPIQPYVPVPLNDGDRVHVG 446
Query: 96 DCTTISV 102
TTI++
Sbjct: 447 AWTTITI 453
>gi|302851934|ref|XP_002957489.1| hypothetical protein VOLCADRAFT_107708 [Volvox carteri f.
nagariensis]
gi|300257131|gb|EFJ41383.1| hypothetical protein VOLCADRAFT_107708 [Volvox carteri f.
nagariensis]
Length = 945
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 2 EPPGMKLI---MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESV 56
EP G ++ + GP SG+ + P + IGR+ + + I D +S +H + +S
Sbjct: 309 EPEGFMMLTLSVTHGPASGKRMVADPAGEYTIGRL-PDSWLQIMDQEVSGRHAAVRWDSA 367
Query: 57 SGKWTIQDLDSCNGTFLNSTTL-----PPNTPFDLRENDTIKLGDCTTISVQM 104
SG+W ++D+ S NGT L + P L D ++LG T + V++
Sbjct: 368 SGRWMLRDMGSLNGTALAGEPIGREYKVPGDERPLSHGDVVQLGSDTLLRVEL 420
>gi|418476676|ref|ZP_13045828.1| secreted protein [Streptomyces coelicoflavus ZG0656]
gi|371542685|gb|EHN71711.1| secreted protein [Streptomyces coelicoflavus ZG0656]
Length = 172
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I +G+W ++DL
Sbjct: 79 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDQNGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPF 84
S NGT+L+ L TP
Sbjct: 137 GSTNGTYLDRARLTTPTPI 155
>gi|428779751|ref|YP_007171537.1| family 3 adenylate cyclase [Dactylococcopsis salina PCC 8305]
gi|428694030|gb|AFZ50180.1| family 3 adenylate cyclase [Dactylococcopsis salina PCC 8305]
Length = 552
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 38 DVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV + +S +H I ++ GKW ++DL S NGT LN L N P + + D I+LG+
Sbjct: 37 DVYLPSSEVSRRHCQIRRLAQGKWRVEDLGSTNGTLLNQGRL--NQPTLINDGDVIQLGN 94
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRR 123
+ ++M + S A+P +NPR+
Sbjct: 95 ---VGIRM-ELAKSASSPAQPAKNPRQ 117
>gi|440703279|ref|ZP_20884220.1| FHA domain protein [Streptomyces turgidiscabies Car8]
gi|440275217|gb|ELP63668.1| FHA domain protein [Streptomyces turgidiscabies Car8]
Length = 173
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G + +GR + + + DD SS+H I G+W ++DL
Sbjct: 80 KLVVSEGTLTGTTVALQ-GQTVTLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 137
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ T L TP L
Sbjct: 138 GSTNGTYLDRTRLTTPTPIPL 158
>gi|118088051|ref|XP_419487.2| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Gallus gallus]
Length = 523
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIE-SVSGKWTIQDLDSCN 69
G + + G+++ +GR G D+T + IS KH + + + G+WT++D S N
Sbjct: 20 GGWLLLEAGTQVTVGR---GLDLTYQLVSKTCPLMISRKHCVFQQNAEGQWTVKDNKSLN 76
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLG 95
G +LN L P+ + + E D I+LG
Sbjct: 77 GVWLNKQRLDPSKTYPIAEGDRIQLG 102
>gi|115471151|ref|NP_001059174.1| Os07g0211400 [Oryza sativa Japonica Group]
gi|34394480|dbj|BAC83693.1| kinase associated protein phosphatase [Oryza sativa Japonica Group]
gi|113610710|dbj|BAF21088.1| Os07g0211400 [Oryza sativa Japonica Group]
Length = 585
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 10 MVRGPRSGETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQD 64
++ GP G + + P I +GR V +D+ +KD +S KH I + + KW I D
Sbjct: 187 VIAGPSHGISCSRQSTSPTIPITLGR-VPPSDLVLKDSEVSGKHARINWNAKTLKWEIVD 245
Query: 65 LDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 246 MGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 293
>gi|366163508|ref|ZP_09463263.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 360
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 4 PGMKLIMVRGPRSGETI--EFKPG-SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
P M+ I+ ETI FK IGRI +D I I +H +I SG++
Sbjct: 255 PFMERILDTDSSQAETIAERFKIFKDNFIIGRISEYSDYVISSRVIGQRHALINLESGRY 314
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTI 92
I DLDS NGTF+N L P ++ +D I
Sbjct: 315 FITDLDSRNGTFVNGQRLQPREKREIYGDDII 346
>gi|50953947|ref|YP_061235.1| secreted protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950429|gb|AAT88130.1| secreted protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 185
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGR----IVRGND--VTIKDDGISSKHLIIESVSGKW 60
+L++ GPR+G +++ +GR I R N+ + I+DD S+ H + + +W
Sbjct: 93 RLVISSGPRAG--------TELALGRDPITIGRSNESGLVIRDDYTSTHHARLLLWNDEW 144
Query: 61 TIQDLDSCNGTFLNS--TTLPPNTPFDLRENDTIKLGDCT 98
IQDLDS NGTFL+ T+P D IK+G T
Sbjct: 145 MIQDLDSTNGTFLDGRRVTVPTQVLLD----TPIKIGTTT 180
>gi|399986022|ref|YP_006566371.1| transmembrane ATP-binding protein ABC transporter [Mycobacterium
smegmatis str. MC2 155]
gi|399230583|gb|AFP38076.1| Conserved transmembrane ATP-binding protein ABC transporter
[Mycobacterium smegmatis str. MC2 155]
Length = 902
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PGS + IGR +R DV I IS HL++ G+W D S NG ++N
Sbjct: 18 GSTRTFAPGSDVVIGRDLRA-DVRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMYVNGR 76
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+ + DL++ + +G+
Sbjct: 77 RV---SSVDLQDGQVLNIGN 93
>gi|433455849|ref|ZP_20413917.1| FHA domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
gi|432197053|gb|ELK53462.1| FHA domain-containing protein [Arthrobacter crystallopoietes
BAB-32]
Length = 161
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L +V GP +G T++ S I +GR + + ++DD S +H + +W I+DL
Sbjct: 69 RLAVVEGPLAGTTLDLA-ASPILLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 126
Query: 67 SCNGTFLNSTTL 78
S NGT+L T L
Sbjct: 127 STNGTYLGDTQL 138
>gi|87308655|ref|ZP_01090795.1| FHA domain protein [Blastopirellula marina DSM 3645]
gi|87288747|gb|EAQ80641.1| FHA domain protein [Blastopirellula marina DSM 3645]
Length = 555
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
KI IGR NDV I +SS+H I+ G+ T++DL S NGTFL S +
Sbjct: 112 KISIGR-AAANDVVIHHPSVSSRHAILLIDEGQLTLRDLQSSNGTFLGSERNRIQQAV-V 169
Query: 87 RENDTIKLGDCTTISVQMITMDSQDESVAKPKRN-PRRQANVPGTSSVRATSGRKKAEAE 145
+D++ LGD T ++ S D+++A N P + P T A +GR+
Sbjct: 170 AASDSVVLGDYETTIANLLL--SSDKTIAGVSLNLPPLETATPTT----ADAGRRNL--- 220
Query: 146 PVETLGLEGG 155
LGL G
Sbjct: 221 ---LLGLAAG 227
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78
D+ + + +S +H +E ++GKW I+DL S NG ++N T L
Sbjct: 17 DLVVSEPIVSGRHCSLELLAGKWFIEDLGSTNGVYVNGTKL 57
>gi|365825737|ref|ZP_09367688.1| hypothetical protein HMPREF0045_01324 [Actinomyces graevenitzii
C83]
gi|365257605|gb|EHM87637.1| hypothetical protein HMPREF0045_01324 [Actinomyces graevenitzii
C83]
Length = 159
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + DD S +H I G W ++DL
Sbjct: 67 RLVITEGPLAGSTVPLTPSSII-IGR-SPAATLVLDDDYASGRHARIFPQDGIWWLEDLG 124
Query: 67 SCNGTFL------NSTTLPPNTP 83
S NGT L + LP NTP
Sbjct: 125 STNGTLLGGNPVTGTVQLPMNTP 147
>gi|118471926|ref|YP_886019.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str.
MC2 155]
gi|441205508|ref|ZP_20972528.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium smegmatis MKD8]
gi|118173213|gb|ABK74109.1| ABC transporter, ATP-binding protein [Mycobacterium smegmatis
str. MC2 155]
gi|440628760|gb|ELQ90554.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium smegmatis MKD8]
Length = 899
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PGS + IGR +R DV I IS HL++ G+W D S NG ++N
Sbjct: 15 GSTRTFAPGSDVVIGRDLRA-DVRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMYVNGR 73
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+ + DL++ + +G+
Sbjct: 74 RV---SSVDLQDGQVLNIGN 90
>gi|443729762|gb|ELU15565.1| hypothetical protein CAPTEDRAFT_220183 [Capitella teleta]
Length = 537
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDD-GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
I+ + +++ +GR+ NDV + + +S H+ E W I+DL+S NGT++N
Sbjct: 21 VIDLEDQTQVTMGRL-ETNDVVLDESLAVSRHHIYFEKKDNIWMIKDLNSGNGTYINDVR 79
Query: 78 LPPNTPFDLRENDTIKLG 95
+ P L D I++G
Sbjct: 80 IDPGVLRPLNNRDVIEVG 97
>gi|3328364|gb|AAC26828.1| kinase associated protein phosphatase [Oryza sativa Indica Group]
Length = 585
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 10 MVRGPRSGETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQD 64
++ GP G + + P I +GR V +D+ +KD +S KH I + + KW I D
Sbjct: 187 VIAGPSHGISCSRQSTSPTIPITLGR-VPPSDLVLKDSEVSGKHARINWNAKTLKWEIVD 245
Query: 65 LDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 246 MGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 293
>gi|390354775|ref|XP_784848.3| PREDICTED: uncharacterized protein LOC579651 [Strongylocentrotus
purpuratus]
Length = 1449
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 38 DVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D++I+ + +H +I + + G +I+D+ S NGTF+N + +P T L++ D+I+ G
Sbjct: 28 DISIQSRSVDKQHSVIAYDQIDGSHSIKDVGSLNGTFVNDSRIPEETYIQLKKGDSIRFG 87
Query: 96 -DCTTISVQMITMD 108
D T + +D
Sbjct: 88 YDPITYRFDSLQLD 101
>gi|213966439|ref|ZP_03394615.1| secreted protein [Corynebacterium amycolatum SK46]
gi|213950909|gb|EEB62315.1| secreted protein [Corynebacterium amycolatum SK46]
Length = 153
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G + I IGR N + DD S +H + + G W ++DLD
Sbjct: 60 QLLVTSGPLAGSRMNLNNQRDITIGR-SESNAFVLNDDFASGQHARVINRDGIWYLEDLD 118
Query: 67 SCNGTFLN 74
S NGTFLN
Sbjct: 119 SRNGTFLN 126
>gi|215769132|dbj|BAH01361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 10 MVRGPRSGETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQD 64
++ GP G + + P I +GR V +D+ +KD +S KH I + + KW I D
Sbjct: 144 VIAGPSHGISCSRQSTSPTIPITLGR-VPPSDLVLKDSEVSGKHARINWNAKTLKWEIVD 202
Query: 65 LDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 203 MGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 250
>gi|222636660|gb|EEE66792.1| hypothetical protein OsJ_23536 [Oryza sativa Japonica Group]
Length = 540
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 10 MVRGPRSGETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQD 64
++ GP G + + P I +GR V +D+ +KD +S KH I + + KW I D
Sbjct: 142 VIAGPSHGISCSRQSTSPTIPITLGR-VPPSDLVLKDSEVSGKHARINWNAKTLKWEIVD 200
Query: 65 LDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 201 MGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 248
>gi|357391349|ref|YP_004906190.1| hypothetical protein KSE_44510 [Kitasatospora setae KM-6054]
gi|311897826|dbj|BAJ30234.1| hypothetical protein KSE_44510 [Kitasatospora setae KM-6054]
Length = 194
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
++RIGR+ G+D+ + D +S H + +G W + DL S NGTF+N + T +
Sbjct: 120 RLRIGRMT-GSDLRLGDSTVSRHHAELRFEAGDWVLYDLGSSNGTFVNDRRVAGGTV--V 176
Query: 87 RENDTIKLG 95
R D ++ G
Sbjct: 177 RAGDRLRFG 185
>gi|429860178|gb|ELA34923.1| fha domain containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 618
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSG-ETIEFKPGSK--------IRIGRI--------VRGN-----DVTI 41
P ++ PR+ ++ F P S+ IR+GR V N V
Sbjct: 227 PSIRFSAYYDPRATRPSLTFPPVSRTLPGGNEIIRVGRYSERDNQPPVPANTPSAAPVGF 286
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 287 KSKVVSRRHCEFWYEDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 344
>gi|367048089|ref|XP_003654424.1| hypothetical protein THITE_2117449 [Thielavia terrestris NRRL 8126]
gi|347001687|gb|AEO68088.1| hypothetical protein THITE_2117449 [Thielavia terrestris NRRL 8126]
Length = 328
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +GP +TIE S IGR + D+ + IS +H +I+
Sbjct: 212 WKLFVFKGPDIIDTIELGTRSCWLIGRELAVVDLPAEHPSISKQHAVIQFRYTEKRNEFG 271
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR D I+ G T V M+
Sbjct: 272 DKIGRVKPYLIDLESANGTMLNGERVPESRYLELRNKDLIQFGSSTREYVIMLA 325
>gi|309789809|ref|ZP_07684388.1| serine/threonine protein kinase with FHA domain protein
[Oscillochloris trichoides DG-6]
gi|308228113|gb|EFO81762.1| serine/threonine protein kinase with FHA domain protein
[Oscillochloris trichoides DG6]
Length = 454
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 2 EPPGMKLIMVRGPRSGET-IEFKPGSKIRIGRI-VRGN-----DVTIKDDGISSKH-LII 53
EPP +L + RS E I+ P +RIGR R N D+ D GI+S+H I
Sbjct: 347 EPPKPRLYITSPHRSWELQIDRLP---VRIGRRDPRQNHYPELDLAEHDRGIASRHHATI 403
Query: 54 ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
+ +T+ DL S NGT LN+ + P P L + D IK+G+
Sbjct: 404 QRDGDYYTLTDLGSTNGTMLNNALITPRVPQRLSQGDRIKIGE 446
>gi|218199299|gb|EEC81726.1| hypothetical protein OsI_25354 [Oryza sativa Indica Group]
Length = 753
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 14/108 (12%)
Query: 10 MVRGPRSGETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQD 64
++ GP G + + P I +GR V +D+ +KD +S KH I + + KW I D
Sbjct: 142 VIAGPSHGISCSRQSTSPTIPITLGR-VPPSDLVLKDSEVSGKHARINWNAKTLKWEIVD 200
Query: 65 LDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 201 MGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 248
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 8/54 (14%)
Query: 59 KWTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
KW I D+ S NGTF+NS + PN P +L + D I LG + +SVQ+
Sbjct: 550 KWEIVDMGSLNGTFVNSRAVHHPNVGSRHWGEPAELADGDIITLGTSSKLSVQI 603
>gi|326518688|dbj|BAJ92505.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523039|dbj|BAJ88560.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 1 MEPPG---MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS 57
+EP G K I R R G IE G+ + +GR+ DV I +S H +E
Sbjct: 85 LEPAGDGDWKHIGYRVARPG-AIEIASGA-MTVGRVPENADVVIPVATVSGVHARLEKKD 142
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
G + D+DS NGT++N L P P ++ + GD
Sbjct: 143 GSLVVTDMDSTNGTYVNERKLVPGFPVAVQPGSLLIFGD 181
>gi|171741693|ref|ZP_02917500.1| hypothetical protein BIFDEN_00781 [Bifidobacterium dentium ATCC
27678]
gi|283454998|ref|YP_003359562.1| FHA domain containing protein [Bifidobacterium dentium Bd1]
gi|306823957|ref|ZP_07457331.1| FHA domain-containing protein [Bifidobacterium dentium ATCC 27679]
gi|309802413|ref|ZP_07696520.1| FHA domain protein [Bifidobacterium dentium JCVIHMP022]
gi|171277307|gb|EDT44968.1| FHA domain protein [Bifidobacterium dentium ATCC 27678]
gi|283101632|gb|ADB08738.1| FHA domain containing protein [Bifidobacterium dentium Bd1]
gi|304552955|gb|EFM40868.1| FHA domain-containing protein [Bifidobacterium dentium ATCC 27679]
gi|308221013|gb|EFO77318.1| FHA domain protein [Bifidobacterium dentium JCVIHMP022]
Length = 175
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ G+ I +GR N V + D+ +SS H + + +G+W I+DL
Sbjct: 83 LVVIDGPLAGSSVPLT-GNTITLGR-AASNTVVLDDEFVSSHHARVYTDPATGQWAIEDL 140
Query: 66 DSCNGTFLN 74
S NGT +N
Sbjct: 141 GSTNGTVVN 149
>gi|389630322|ref|XP_003712814.1| RING finger protein [Magnaporthe oryzae 70-15]
gi|351645146|gb|EHA53007.1| RING finger protein [Magnaporthe oryzae 70-15]
Length = 737
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSG-ETIEFKPGSK--------IRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P S+ IR+GR + V
Sbjct: 314 PSIRFTTFCDPRATRPSLTFTPVSRTLPTGTEIIRVGRYSERDVPPNVPINVPSAAPVGF 373
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H + GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 374 KSKVVSRRHCEFWNEDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 431
>gi|302552732|ref|ZP_07305074.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
gi|302470350|gb|EFL33443.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
Length = 169
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 76 KLVVTEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 133
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ L TP L
Sbjct: 134 GSTNGTYLDRNRLTTPTPIAL 154
>gi|440466091|gb|ELQ35377.1| RING finger protein [Magnaporthe oryzae Y34]
gi|440482707|gb|ELQ63174.1| RING finger protein [Magnaporthe oryzae P131]
Length = 717
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSG-ETIEFKPGSK--------IRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P S+ IR+GR + V
Sbjct: 314 PSIRFTTFCDPRATRPSLTFTPVSRTLPTGTEIIRVGRYSERDVPPNVPINVPSAAPVGF 373
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H + GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 374 KSKVVSRRHCEFWNEDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 431
>gi|298251910|ref|ZP_06975713.1| serine/threonine protein kinase with FHA domain [Ktedonobacter
racemifer DSM 44963]
gi|297546502|gb|EFH80370.1| serine/threonine protein kinase with FHA domain [Ktedonobacter
racemifer DSM 44963]
Length = 474
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P +L + GP +G + F +IGR G D+ I +S H + G+W +
Sbjct: 374 PVLARLTLQSGPLAGRSYRFHQ-DVTKIGR-TNGCDLVISGRTVSRHHARLWFAEGRWFL 431
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DL+S NGT +N+ + P L + D I GD
Sbjct: 432 ADLNSVNGTTVNNIRI--QQPVVLNDGDVIHFGD 463
>gi|302535542|ref|ZP_07287884.1| secreted protein [Streptomyces sp. C]
gi|302444437|gb|EFL16253.1| secreted protein [Streptomyces sp. C]
Length = 167
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 74 KLVVSEGTLTGTTVALA-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 131
Query: 66 DSCNGTFLNSTTLPPNTPF 84
S NGT+L+ T L TP
Sbjct: 132 GSTNGTYLDRTRLTTPTPI 150
>gi|88812167|ref|ZP_01127419.1| GGDEF family protein [Nitrococcus mobilis Nb-231]
gi|88790671|gb|EAR21786.1| GGDEF family protein [Nitrococcus mobilis Nb-231]
Length = 300
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 3 PPG------MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV 56
PPG L+++ G G+ S + +GR + D+ I +D IS KH +IE
Sbjct: 9 PPGDSPWQNACLVVINGIDLGKKYALLQASML-VGRSNQA-DIQIDEDAISRKHAVIEGH 66
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G++ I+DL+S NGT++N + + L + D +K+G
Sbjct: 67 EGRFVIRDLESTNGTYVNDCAVREHP---LADGDQVKIG 102
>gi|373487345|ref|ZP_09578013.1| GAF domain protein [Holophaga foetida DSM 6591]
gi|372009427|gb|EHP10047.1| GAF domain protein [Holophaga foetida DSM 6591]
Length = 700
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 43 DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD--LRENDTIKLGDC 97
D +S H +I GKW ++DL S NGT LN LP TPF L + D I LGD
Sbjct: 37 DPSVSRMHAMIFLSEGKWWLRDLGSRNGTLLNG--LPVGTPFGSLLEDGDEISLGDW 91
>gi|408678171|ref|YP_006877998.1| hypothetical protein SVEN_2453 [Streptomyces venezuelae ATCC 10712]
gi|328882500|emb|CCA55739.1| hypothetical protein SVEN_2453 [Streptomyces venezuelae ATCC 10712]
Length = 423
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN------DVTI--KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
G++I IGR D+++ +D G+S +H ++++ G W + D +S NGT +N
Sbjct: 332 GNQISIGRRRHSTGESPDIDLSVPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTING 391
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
P P P L+E D + +G TTI+V
Sbjct: 392 GEEPIQPYVPVQLQEGDRVHVGAWTTITV 420
>gi|380480896|emb|CCF42166.1| FHA domain-containing protein [Colletotrichum higginsianum]
Length = 620
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRIV-RGNDVTI------------ 41
P ++ PR+ ++ F P S+ IR+GR R N +I
Sbjct: 227 PSIRFSAYYDPRATRPSLTFPPVSRTLPSGGEIIRVGRYSERDNQPSIPHNTPSAAPVGF 286
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 287 KSKVVSRRHCEFWYDDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 344
>gi|260439366|ref|ZP_05793182.1| DNA segregation ATPase FtsK/SpoIIIE family protein [Butyrivibrio
crossotus DSM 2876]
gi|292808162|gb|EFF67367.1| DNA segregation ATPase FtsK/SpoIIIE family protein [Butyrivibrio
crossotus DSM 2876]
Length = 1530
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
G ++ + F+ +++ IGR N V I + +SS H +I+ + G WTI+D +S NGTF
Sbjct: 98 GRQTFDKYVFRDNAELTIGR-DSDNTVCINNRYVSSHHAVIKYMDGVWTIEDKNSTNGTF 156
Query: 73 LNS 75
+N+
Sbjct: 157 VNN 159
>gi|441189040|ref|ZP_20970657.1| forkhead-associated protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440613775|gb|ELQ77150.1| forkhead-associated protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 130
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H L+++ G W + D +S NGT +N P P P L E D + +G T
Sbjct: 64 EDPGVSHQHALLVQQQDGSWAVVDQNSTNGTTVNLAEDPIQPYVPTPLHEGDRVHVGAWT 123
Query: 99 TISVQ 103
T++V+
Sbjct: 124 TLTVR 128
>gi|357390855|ref|YP_004905696.1| hypothetical protein KSE_39440 [Kitasatospora setae KM-6054]
gi|311897332|dbj|BAJ29740.1| hypothetical protein KSE_39440 [Kitasatospora setae KM-6054]
Length = 173
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
L++ +G +G T+ + G I +GR + + + DD SS+H I +G+WT++DL
Sbjct: 80 HLVVTQGSLAGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDQAGQWTVEDL 137
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L L TP +
Sbjct: 138 GSTNGTYLERQRLTTPTPLQI 158
>gi|332798391|ref|YP_004459890.1| FHA domain-containing protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696126|gb|AEE90583.1| FHA domain containing protein [Tepidanaerobacter acetatoxydans Re1]
Length = 158
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 46 ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ISSKH +I K IQDL+S NGTFLN + P L+END I+LG
Sbjct: 90 ISSKHALIAKRGSKLVIQDLNSTNGTFLNGKKIKK--PVRLKENDEIRLG 137
>gi|426403147|ref|YP_007022118.1| hypothetical protein Bdt_1151 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859815|gb|AFY00851.1| large Ala/Glu-rich protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 794
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWT---IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
D+++ D+ IS HL+ VS +W I+D +S NGT++N T + TP ++ +D I+L
Sbjct: 33 DLSLNDNNISRVHLV---VSRRWNQIWIEDKNSSNGTYINGTRIVQGTPVNVVPSDRIQL 89
Query: 95 GDCTTI 100
G I
Sbjct: 90 GRSEYI 95
>gi|116750855|ref|YP_847542.1| FHA domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116699919|gb|ABK19107.1| FHA domain containing protein [Syntrophobacter fumaroxidans MPOB]
Length = 244
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G + IGR + NDV I + G+S H I+SV ++ + DLDS NGT++N P T
Sbjct: 21 GGFLSIGR-EKSNDVVIDNLGVSRFHAKIDSVDDRFLLTDLDSKNGTYVNEA---PVTSH 76
Query: 85 DLRENDTIKLGDCT 98
L + I +G T
Sbjct: 77 WLSHGEVITIGKYT 90
>gi|400289051|ref|ZP_10791083.1| FHA domain-containing protein [Psychrobacter sp. PAMC 21119]
Length = 448
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
NDV + +S H ++ ++GK ++DLDS NGTF+N + N L NDT+
Sbjct: 48 NDVVLGSKEVSRNHAVLSVLNGKLYVKDLDSSNGTFINEQRIDSNKSKHLEANDTLGFAS 107
Query: 97 --CTTISVQMITMDSQDESVAKP 117
T + ++ DESV +P
Sbjct: 108 FAFTVTPLSVVNEAVVDESVEQP 130
>gi|296138442|ref|YP_003645685.1| SARP family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296026576|gb|ADG77346.1| transcriptional regulator, SARP family [Tsukamurella paurometabola
DSM 20162]
Length = 379
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 13 GPR----SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSC 68
GPR + + E+ +IR+GR+ NDV++ D +S +H +I + ++DL S
Sbjct: 284 GPRGLLIASDGTEYPVHGEIRLGRL-PDNDVSVDDTKVSREHAVITGAVSGFAVRDLMSS 342
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMD 108
NGTF+ + P L + D + LG TT + ++I D
Sbjct: 343 NGTFVGERRVAGQMP--LSDGDELTLGR-TTFTFRVIDED 379
>gi|300780109|ref|ZP_07089965.1| secreted protein [Corynebacterium genitalium ATCC 33030]
gi|300534219|gb|EFK55278.1| secreted protein [Corynebacterium genitalium ATCC 33030]
Length = 148
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP G +E ++ +GR ND + DD SS+H + +W ++DLD
Sbjct: 55 EVVVVEGPLQGSHMEISTLEELSLGR-ADNNDFVLGDDFASSRHARLFRRGSEWFVEDLD 113
Query: 67 SCNGTFLN 74
S NGTF++
Sbjct: 114 SRNGTFVD 121
>gi|359455929|ref|ZP_09245134.1| hypothetical protein P20495_3914 [Pseudoalteromonas sp. BSi20495]
gi|414069638|ref|ZP_11405630.1| FHA domain containing protein [Pseudoalteromonas sp. Bsw20308]
gi|358047006|dbj|GAA81383.1| hypothetical protein P20495_3914 [Pseudoalteromonas sp. BSi20495]
gi|410807868|gb|EKS13842.1| FHA domain containing protein [Pseudoalteromonas sp. Bsw20308]
Length = 323
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 29 RIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
R GR+V D + I+ H +IE ++ +W I DL S NG +LN + N L++
Sbjct: 20 RFGRLVHSVDTLLDFPEITRIHAVIEWLNEQWCINDL-SKNGVWLNDKKISKNQNIPLKK 78
Query: 89 NDTIKLGDCTTISVQMITMD 108
D I+ + Q+I +D
Sbjct: 79 GDNIRFSEVNNAVYQVICVD 98
>gi|239989099|ref|ZP_04709763.1| hypothetical protein SrosN1_17485 [Streptomyces roseosporus NRRL
11379]
gi|291446100|ref|ZP_06585490.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291349047|gb|EFE75951.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 172
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L T L TP L
Sbjct: 137 GSTNGTYLERTRLTTPTPVPL 157
>gi|411003681|ref|ZP_11380010.1| FHA domain containing protein [Streptomyces globisporus C-1027]
Length = 172
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGSLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L T L TP L
Sbjct: 137 GSTNGTYLERTRLTTPTPVPL 157
>gi|296453240|ref|YP_003660383.1| FHA domain containing protein [Bifidobacterium longum subsp. longum
JDM301]
gi|296182671|gb|ADG99552.1| FHA domain containing protein [Bifidobacterium longum subsp. longum
JDM301]
Length = 176
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ + I +GR N V + D+ +SS H + ++ SG+W I+DL
Sbjct: 84 LVIIDGPLAGSSVPLA-EADIALGR-AASNTVVLDDEFVSSHHARVYRDTRSGQWAIEDL 141
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 142 NSTNGTVVNQQRINRPTILPARIPVRIGATTFELR 176
>gi|111226083|ref|YP_716877.1| hypothetical protein FRAAL6750 [Frankia alni ACN14a]
gi|111153615|emb|CAJ65373.1| conserved hypothetical protein [Frankia alni ACN14a]
Length = 165
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KL++ +G +G TI S + IGR + + + ++DD S +H + G+W ++DL
Sbjct: 73 KLVVTKGHLAGTTIPLG-SSPVTIGR-AQDSTLVLEDDFASGRHARLVPHDGQWFVEDLG 130
Query: 67 SCNGTFLN 74
S NGTFLN
Sbjct: 131 STNGTFLN 138
>gi|296135289|ref|YP_003642531.1| FHA domain-containing protein [Thiomonas intermedia K12]
gi|295795411|gb|ADG30201.1| FHA domain containing protein [Thiomonas intermedia K12]
Length = 223
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 37 NDVTIKDDGISSKHLIIESVSG----KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTI 92
NDV I + +S +H ++ SG +TIQDL S NGT+LN + ++PF RE DT+
Sbjct: 31 NDVVIDNLAVSGEHAVLLRDSGTDAESYTIQDLGSTNGTYLNGAPI-KSSPF--REGDTV 87
Query: 93 KLG 95
+G
Sbjct: 88 DIG 90
>gi|168033137|ref|XP_001769073.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679707|gb|EDQ66151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 19/118 (16%)
Query: 6 MKLIMVRGPRSGETIE---FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK--- 59
++L +V GP SG E + + IGR+ + ND+ + D +S KH++I S +GK
Sbjct: 6 IQLEVVAGPVSGLRAEKQVVGSNAVLTIGRMPQ-NDLVLNDPEVSGKHVVI-SWNGKLSN 63
Query: 60 WTIQDLDSCNGTFLNS-----------TTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
W + D+ S NGT +NS TT P L DTI LG + + V+++
Sbjct: 64 WELIDMGSLNGTLVNSRPAGAAQKANSTTRQRGLPTSLSNGDTITLGSSSNVLVRILA 121
>gi|340518749|gb|EGR48989.1| predicted protein [Trichoderma reesei QM6a]
Length = 320
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +T+E S +GR + D+ + IS +H +I+
Sbjct: 204 WKLFVFKGKDIVDTVELSARSCWLVGRELAVVDLAAEHPSISKQHAVIQFRYTEKRNEFG 263
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR+ D IK G T V M+
Sbjct: 264 DKIGRVKPYLIDLESANGTMLNDEKVPDSRYLELRDKDIIKFGHSTREYVVMLA 317
>gi|326778177|ref|ZP_08237442.1| FHA domain containing protein [Streptomyces griseus XylebKG-1]
gi|326658510|gb|EGE43356.1| FHA domain containing protein [Streptomyces griseus XylebKG-1]
Length = 172
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L T L TP L
Sbjct: 137 GSTNGTYLERTRLTTPTPVPL 157
>gi|182437522|ref|YP_001825241.1| hypothetical protein SGR_3729 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178466038|dbj|BAG20558.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 173
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 80 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 137
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L T L TP L
Sbjct: 138 GSTNGTYLERTRLTTPTPVPL 158
>gi|381159322|ref|ZP_09868555.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
gi|380880680|gb|EIC22771.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
Length = 585
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG-ISSKHLIIESVS-GKWT 61
P ++L V GP+ G T++ G +GR +R N + + DD IS +H IE ++ +
Sbjct: 487 PPLRLAFVTGPQRGATVKLSLGQPAVLGRALR-NALAVTDDAEISGRHAEIERLANNQLV 545
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++DL S NGT LN + P L D I +G
Sbjct: 546 LRDLGSTNGTRLNGVRIQGTHP--LNPGDLIGVG 577
>gi|320102448|ref|YP_004178039.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
gi|319749730|gb|ADV61490.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
Length = 715
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDL 65
I++ G G + P +GR N + I + IS +H G+ + DL
Sbjct: 26 YFIVIGGGTPGAILPLSP-EGTSLGRFPE-NQLQILESSISRRHAHFHVDKRGRSMLTDL 83
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAK 116
+ NGTF+N LPP P ++++ND I+ G + + V+ + +D + + +
Sbjct: 84 GTTNGTFVNGEPLPPRIPREIKDNDLIQFG--SALMVKFVWLDQYEYTFHQ 132
>gi|410692967|ref|YP_003623588.1| conserved hypothetical protein;putative FHA domain [Thiomonas sp.
3As]
gi|294339391|emb|CAZ87747.1| conserved hypothetical protein;putative FHA domain [Thiomonas sp.
3As]
Length = 223
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 37 NDVTIKDDGISSKHLIIESVSG----KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTI 92
NDV I + +S +H ++ SG +TIQDL S NGT+LN + ++PF RE DT+
Sbjct: 31 NDVVIDNLAVSGEHAVLLRDSGTDAESYTIQDLGSTNGTYLNGAPI-KSSPF--REGDTV 87
Query: 93 KLG 95
+G
Sbjct: 88 DIG 90
>gi|288922024|ref|ZP_06416232.1| FHA domain containing protein [Frankia sp. EUN1f]
gi|288346640|gb|EFC80961.1| FHA domain containing protein [Frankia sp. EUN1f]
Length = 180
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ +G +G TI P I IGR + + ++DD S +H + G+W ++DL
Sbjct: 88 RLVVTKGHLAGTTIPLGP-EGITIGR-APDSTLVLEDDFASGRHARLVPHDGQWFVEDLG 145
Query: 67 SCNGTFLNST 76
S NGTFLN T
Sbjct: 146 STNGTFLNRT 155
>gi|163849337|ref|YP_001637381.1| forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222527331|ref|YP_002571802.1| FHA domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163670626|gb|ABY36992.1| Forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222451210|gb|ACM55476.1| FHA domain containing protein [Chloroflexus sp. Y-400-fl]
Length = 173
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D G+S +H I +G + ++DL S NGTFLN + P+ P L D I+ G
Sbjct: 110 YDAGVSRRHARIVCHNGSYVLEDLGSSNGTFLNRQRVSPDRPVPLHHGDEIQFG 163
>gi|444910849|ref|ZP_21231027.1| FHA domain protein [Cystobacter fuscus DSM 2262]
gi|444718704|gb|ELW59514.1| FHA domain protein [Cystobacter fuscus DSM 2262]
Length = 188
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
P + I +GR + +D+ ++D +S H E+ +G W + D S NGT+ N T L P
Sbjct: 73 PATGIVLGRTL-DSDIMVEDPTVSRVHASFNEEAQTGMWYVSDSGSHNGTWQNGTLLIPG 131
Query: 82 TPFDLRENDTIKLGDCTTISVQM 104
P L E +++ GD +Q
Sbjct: 132 RPSPLFERASLRFGDVMATFLQF 154
>gi|72163460|ref|YP_291117.1| FHA domain-containing protein [Thermobifida fusca YX]
gi|71917192|gb|AAZ57094.1| FHA domain protein [Thermobifida fusca YX]
Length = 159
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++V+GP +G +I+ I IGR + + + I DD S +H + +G+W ++DL S
Sbjct: 68 LVIVKGPLAGTSIDLT-SQPIIIGR-AKDSTLVINDDYASGRHARLFPDNGRWIVEDLGS 125
Query: 68 CNGTFLNSTTL 78
NGT+L + L
Sbjct: 126 TNGTYLGQSRL 136
>gi|405362779|ref|ZP_11025832.1| Adenylate cyclase [Chondromyces apiculatus DSM 436]
gi|397090239|gb|EJJ21113.1| Adenylate cyclase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 491
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+ L + +G + G + F+ +++ IGR ND+ + D G+S +H I K+ + D+
Sbjct: 3 ILLTITQGLQQGRELVFE-QAEVNIGRTSE-NDLVLHDHGVSRRHARIVLRDEKYFVADM 60
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
S NGT LN LP LR+ D I +G V + DS DE +P R
Sbjct: 61 GSSNGTVLNGALLPGEQ--QLRDGDKIGVGPVEFTFV-WVPPDS-DEDATRPIR 110
>gi|262197732|ref|YP_003268941.1| protein serine phosphatase with GAF(s) sensor(s) [Haliangium
ochraceum DSM 14365]
gi|262081079|gb|ACY17048.1| protein serine phosphatase with GAF(s) sensor(s) [Haliangium
ochraceum DSM 14365]
Length = 606
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWT 61
PP LI + GP +G + IGR R + + I D +S +H I G W
Sbjct: 11 PPPTALIFLAGPNAGRRYKLHREGDYIIGR--RSDCQIFIPDMRVSRQHARIHEEQGAWV 68
Query: 62 IQDLDSCNGTFLN 74
++DL S NGTFLN
Sbjct: 69 LEDLGSNNGTFLN 81
>gi|159900557|ref|YP_001546804.1| FHA domain-containing protein [Herpetosiphon aurantiacus DSM 785]
gi|159893596|gb|ABX06676.1| FHA domain containing protein [Herpetosiphon aurantiacus DSM 785]
Length = 172
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRI-VRGN---DVTIKDDG-----ISSKHLIIE 54
P ++++++ SG + F I IGR +G+ D+ + DG +S +H II
Sbjct: 63 PVLRVVILN---SGRKLGFNTNQPIVIGRQDSKGSFYPDIDLSTDGGLEAGVSRRHAIIR 119
Query: 55 SVSGK-WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
SG T++DL S NGTF+N L N+P LR D ++LG+
Sbjct: 120 IQSGNVCTLEDLGSSNGTFINREKLAANSPKALRHGDEVRLGN 162
>gi|23336397|ref|ZP_00121616.1| COG1716: FOG: FHA domain [Bifidobacterium longum DJO10A]
gi|189440240|ref|YP_001955321.1| hypothetical protein BLD_1378 [Bifidobacterium longum DJO10A]
gi|419849420|ref|ZP_14372466.1| FHA domain protein [Bifidobacterium longum subsp. longum 35B]
gi|419852168|ref|ZP_14375064.1| FHA domain protein [Bifidobacterium longum subsp. longum 2-2B]
gi|189428675|gb|ACD98823.1| Hypothetical protein BLD_1378 [Bifidobacterium longum DJO10A]
gi|291517684|emb|CBK71300.1| FOG: FHA domain [Bifidobacterium longum subsp. longum F8]
gi|386411787|gb|EIJ26499.1| FHA domain protein [Bifidobacterium longum subsp. longum 2-2B]
gi|386411958|gb|EIJ26657.1| FHA domain protein [Bifidobacterium longum subsp. longum 35B]
Length = 176
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ + I +GR N V + D+ +SS H + ++ SG+W I+DL
Sbjct: 84 LVIIDGPLAGSSVPLA-EADITLGR-AASNTVVLDDEFVSSHHARVYRDTRSGQWAIEDL 141
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 142 NSTNGTVVNQQRINRPTILPARIPVRIGATTFELR 176
>gi|118352925|ref|XP_001009733.1| FHA domain containing protein [Tetrahymena thermophila]
gi|89291500|gb|EAR89488.1| FHA domain containing protein [Tetrahymena thermophila SB210]
Length = 648
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 14 PRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES-VSGKWTIQDLDSCNGTF 72
P + I +KP + +G+ D ++ IS KH I++ +G+ I DL S +GTF
Sbjct: 37 PIEEKDISYKPF--LLLGKYQDLCDFVLEHPTISRKHAIVQHKANGEIFIYDLGSSHGTF 94
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
+N+ LP L D+I+ T I +
Sbjct: 95 VNNKRLPSKIYHKLHPFDSIRFASSTRIYI 124
>gi|86159753|ref|YP_466538.1| sigma-54 dependent trancsriptional regulator [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776264|gb|ABC83101.1| sigma54 specific transcriptional regulator with PAS sensor, Fis
family [Anaeromyxobacter dehalogenans 2CP-C]
Length = 554
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTPFDLRENDTIKLGD 96
D + D +S++HL +E+ G+W + DL S NGTF++ + PF L ++LGD
Sbjct: 148 DAPLDDPFVSARHLRVEARGGRWALADLGSTNGTFISGARVTRAELPFGL----PVQLGD 203
Query: 97 CTTI 100
+
Sbjct: 204 AEIV 207
>gi|23465169|ref|NP_695772.1| hypothetical protein BL0584 [Bifidobacterium longum NCC2705]
gi|227547433|ref|ZP_03977482.1| FOG: FHA domain protein [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239622783|ref|ZP_04665814.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322688242|ref|YP_004207976.1| hypothetical protein BLIF_0051 [Bifidobacterium longum subsp.
infantis 157F]
gi|322690255|ref|YP_004219825.1| hypothetical protein BLLJ_0063 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|384202411|ref|YP_005588158.1| hypothetical protein BLNIAS_02743 [Bifidobacterium longum subsp.
longum KACC 91563]
gi|23325792|gb|AAN24408.1| hypothetical protein with FHA domain [Bifidobacterium longum
NCC2705]
gi|227212080|gb|EEI79976.1| FOG: FHA domain protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|239514780|gb|EEQ54647.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|320455111|dbj|BAJ65733.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320459578|dbj|BAJ70198.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
gi|338755418|gb|AEI98407.1| hypothetical protein BLNIAS_02743 [Bifidobacterium longum subsp.
longum KACC 91563]
Length = 176
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ + I +GR N V + D+ +SS H + ++ SG+W I+DL
Sbjct: 84 LVIIDGPLAGSSVPLA-EADITLGR-AASNTVVLDDEFVSSHHARVYRDTRSGQWAIEDL 141
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 142 NSTNGTVVNQQRINRPTILPARIPVRIGATTFELR 176
>gi|358399286|gb|EHK48629.1| hypothetical protein TRIATDRAFT_298047 [Trichoderma atroviride IMI
206040]
Length = 564
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 28/120 (23%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRI----------VRGNDVTIKDD 44
P ++ PRS ++ F P S+ IR+GR V GN +
Sbjct: 169 PSIRFSAYYDPRSARPSLSFPPISRTLSNGTEVIRVGRYSERDNHALASVAGNQASAAPV 228
Query: 45 GISSK-----HLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
G SK H +GKW I+D+ S +GTFLN L P + F + + D ++LG
Sbjct: 229 GFKSKVVSRRHCEFWYENGKWFIKDVKSSSGTFLNHIRLSPPSQESKAFPVNDGDIVQLG 288
>gi|336319167|ref|YP_004599135.1| FHA domain containing protein [[Cellvibrio] gilvus ATCC 13127]
gi|336102748|gb|AEI10567.1| FHA domain containing protein [[Cellvibrio] gilvus ATCC 13127]
Length = 171
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ +GP +G + S + IGR G + + DD SS+H I G W ++DL
Sbjct: 79 RLVVTQGPLTGTIVPLTQ-SAVLIGR-APGCTLVLDDDYSSSRHARIYPQGGDWYVEDLG 136
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGTF+ + P L T+++G
Sbjct: 137 STNGTFVGEQRV--EQPVRLAPGSTVRVG 163
>gi|312133574|ref|YP_004000913.1| protein [Bifidobacterium longum subsp. longum BBMN68]
gi|317483403|ref|ZP_07942394.1| FHA domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|419847918|ref|ZP_14371055.1| FHA domain protein [Bifidobacterium longum subsp. longum 1-6B]
gi|419854268|ref|ZP_14377057.1| FHA domain protein [Bifidobacterium longum subsp. longum 44B]
gi|311772827|gb|ADQ02315.1| Hypothetical protein BBMN68_1313 [Bifidobacterium longum subsp.
longum BBMN68]
gi|316915158|gb|EFV36589.1| FHA domain-containing protein [Bifidobacterium sp. 12_1_47BFAA]
gi|386409336|gb|EIJ24198.1| FHA domain protein [Bifidobacterium longum subsp. longum 1-6B]
gi|386417962|gb|EIJ32432.1| FHA domain protein [Bifidobacterium longum subsp. longum 44B]
Length = 176
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ + I +GR N V + D+ +SS H + ++ SG+W I+DL
Sbjct: 84 LVIIDGPLAGSSVPLA-EADITLGR-AASNTVVLDDEFVSSHHARVYRDTRSGQWAIEDL 141
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 142 NSTNGTVVNQQRISRPTILPARIPVRIGATTFELR 176
>gi|163841620|ref|YP_001626025.1| hypothetical protein RSal33209_2888 [Renibacterium salmoninarum
ATCC 33209]
gi|162955096|gb|ABY24611.1| hypothetical exported protein with FHA domain [Renibacterium
salmoninarum ATCC 33209]
Length = 160
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 2 EPPG----MKLIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESV 56
EPP +L+++ GP +G+ IE GS+ I +GR + + + ++DD S +H +
Sbjct: 59 EPPARQQAHQLVVIEGPLNGQVIEL--GSQPILLGR-AQESTLVLEDDYASGRHARLFPQ 115
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
+W I+DL S NGT+L L P +L
Sbjct: 116 GSRWFIEDLGSTNGTYLADQQLTRALPVEL 145
>gi|350290837|gb|EGZ72051.1| hypothetical protein NEUTE2DRAFT_111277 [Neurospora tetrasperma
FGSC 2509]
Length = 776
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGR--------IVRGN-----DVTI 41
P ++ PR+ ++ F P S+ IR+GR +V N V
Sbjct: 370 PSIRFSTFYDPRATRPSLTFSPISRTLPTGKEVIRVGRYSERDKPSVVPHNVPSAAPVGF 429
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 430 KSKVVSRRHCEFWYEDGKWFIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 487
>gi|237784762|ref|YP_002905467.1| hypothetical protein ckrop_0127 [Corynebacterium kroppenstedtii DSM
44385]
gi|237757674|gb|ACR16924.1| conserved hypothetical protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 169
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
P +L++ GP+ G+ I+ S++ +GR + + DD SS+H W ++
Sbjct: 74 PISELVVTNGPQRGQIIDLTSQSEVFVGR-ASSCTLVLSDDYASSRHARFIRNGNDWFVE 132
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
DL+S NGT+LN + + L D I++G TT+ VQ
Sbjct: 133 DLESRNGTYLNEQRI--DQLETLTRGDAIRVGR-TTLHVQ 169
>gi|374610581|ref|ZP_09683372.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium tusciae JS617]
gi|373550456|gb|EHP77098.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium tusciae JS617]
Length = 907
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + +GR +R D+ I IS HL++ G+W D S NG ++N+
Sbjct: 34 GSTRTFAPGNDVVVGRDLRA-DIRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMYVNNR 92
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+P DL++ + +G+
Sbjct: 93 RVP---TVDLQDGQHLNIGN 109
>gi|336469518|gb|EGO57680.1| hypothetical protein NEUTE1DRAFT_146231 [Neurospora tetrasperma
FGSC 2508]
Length = 722
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGR--------IVRGN-----DVTI 41
P ++ PR+ ++ F P S+ IR+GR +V N V
Sbjct: 316 PSIRFSTFYDPRATRPSLTFSPISRTLPTGKEVIRVGRYSERDKPSVVPHNVPSAAPVGF 375
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 376 KSKVVSRRHCEFWYEDGKWFIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 433
>gi|375092225|ref|ZP_09738510.1| hypothetical protein HMPREF9709_01372 [Helcococcus kunzii ATCC
51366]
gi|374561991|gb|EHR33328.1| hypothetical protein HMPREF9709_01372 [Helcococcus kunzii ATCC
51366]
Length = 485
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 45 GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
IS H II + + I+D +S N T++N + + PNT ++ +ND IKL D
Sbjct: 426 SISRSHAIISKDADNYFIEDTNSTNHTYVNGSIITPNTKIEINDNDEIKLAD 477
>gi|310789622|gb|EFQ25155.1| FHA domain-containing protein [Glomerella graminicola M1.001]
Length = 632
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKP--------GSKIRIGRIVRGND-------------VTI 41
P ++ PR+ ++ F P G IR+GR ++ V
Sbjct: 234 PSIRFSAYYDPRATRPSLTFPPVSRTLPSGGDVIRVGRYSERDNQPNVPNNTPSAAPVGF 293
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 294 KSKVVSRRHCEFWYDDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 351
>gi|226530367|ref|NP_001152186.1| LOC100285824 [Zea mays]
gi|195653641|gb|ACG46288.1| protein Kinase-associated protein phosphatase [Zea mays]
Length = 581
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
I +GR V +D+ +KD +S KH I + + KW + D+ S NGTFLNS + P+
Sbjct: 204 ITLGR-VPPSDLVLKDSEVSGKHAQINWNAKTLKWELVDMGSLNGTFLNSQAVHHPDAES 262
Query: 83 -----PFDLRENDTIKLGDCTTISVQMITMDSQ 110
P +L D I LG + +SVQ IT+ +Q
Sbjct: 263 RHWGEPAELAHGDIITLGTSSKLSVQ-ITLQNQ 294
>gi|398785954|ref|ZP_10548767.1| forkhead-associated protein [Streptomyces auratus AGR0001]
gi|396994059|gb|EJJ05113.1| forkhead-associated protein [Streptomyces auratus AGR0001]
Length = 513
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 40 TIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGD 96
T +D G+S +H L+++ G W + D +S NGT +N P P P L E D + +G
Sbjct: 445 TPEDPGVSHQHALLVQQQDGSWAVVDQNSTNGTTINLAEDPIQPYVPVPLHEGDRVHVGA 504
Query: 97 CTTISV 102
TT++V
Sbjct: 505 WTTLTV 510
>gi|325182190|emb|CCA16643.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 553
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 31 GRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
GR+ G DV IS H + + GK + DL S +GTFLN + P + L
Sbjct: 45 GRMKEGCDVHFNHPSISRTHAVFQFDEQGKLFLMDLKSTHGTFLNKKRIHPGKFYALNVG 104
Query: 90 DTIKLGDCTTISV 102
D ++ GD T +
Sbjct: 105 DLLRFGDSTRLYA 117
>gi|223944283|gb|ACN26225.1| unknown [Zea mays]
gi|414588923|tpg|DAA39494.1| TPA: protein Kinase-associated protein phosphatase [Zea mays]
Length = 581
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
I +GR V +D+ +KD +S KH I + + KW + D+ S NGTFLNS + P+
Sbjct: 204 ITLGR-VPPSDLVLKDSEVSGKHAQINWNAKTLKWELVDMGSLNGTFLNSQAVHHPDAES 262
Query: 83 -----PFDLRENDTIKLGDCTTISVQMITMDSQ 110
P +L D I LG + +SVQ IT+ +Q
Sbjct: 263 RHWGEPAELAHGDIITLGTSSKLSVQ-ITLQNQ 294
>gi|456387136|gb|EMF52649.1| hypothetical protein SBD_5725 [Streptomyces bottropensis ATCC
25435]
Length = 175
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 82 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 139
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ L TP L
Sbjct: 140 GSTNGTYLDRNRLTTPTPIPL 160
>gi|383766750|ref|YP_005445731.1| hypothetical protein PSMK_16750 [Phycisphaera mikurensis NBRC
102666]
gi|381387018|dbj|BAM03834.1| hypothetical protein PSMK_16750 [Phycisphaera mikurensis NBRC
102666]
Length = 622
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSK----IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
LI + GP G+ P + + +GR G+ + D S +H + G+W ++
Sbjct: 4 LIAIAGPDKGQAHPLDPAATREQPMVLGR--EGDPFRLSDRRASRRHAGLFREGGRWYVE 61
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRR 123
DL S GT N L P LRE D +++G +M + A P PRR
Sbjct: 62 DLGSTTGTLRNHKPLEETEP--LREGDFLQVGKTVLTLSRMEAPTLGPHAAATPPAEPRR 119
>gi|336273580|ref|XP_003351544.1| hypothetical protein SMAC_00086 [Sordaria macrospora k-hell]
gi|380095824|emb|CCC05870.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 708
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGR-------------IVRGNDVTI 41
P ++ PR+ ++ F P S+ IR+GR + V
Sbjct: 302 PSIRFSTFYDPRATRPSLTFSPISRTLPTGKEIIRVGRYSERDKPSAVPHNMPSAAPVGF 361
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 362 KSKVVSRRHCEFWYEDGKWFIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 419
>gi|383452899|ref|YP_005366888.1| sensory box histidine kinase/response regulator [Corallococcus
coralloides DSM 2259]
gi|380732784|gb|AFE08786.1| sensory box histidine kinase/response regulator [Corallococcus
coralloides DSM 2259]
Length = 755
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 17 GETIEFKPGSKIRIGRIVRGND--VTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFL 73
G+ +PG + I RG++ V I D G+S KH I+ G + DL+S NGTFL
Sbjct: 38 GKAYRLEPGEHV----IGRGSEAEVRIDDHGVSRKHARILRKSDGSCLVTDLESTNGTFL 93
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N LP +T +L+E D +++G T
Sbjct: 94 NG--LPVSTA-ELQEGDRLQVGTVTVF 117
>gi|374310885|ref|YP_005057315.1| forkhead-associated protein [Granulicella mallensis MP5ACTX8]
gi|358752895|gb|AEU36285.1| Forkhead-associated protein [Granulicella mallensis MP5ACTX8]
Length = 701
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 37 NDVTIKDDG--ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
N+V ++D +S HL + + + DLDS NGT+LN LP LR D + L
Sbjct: 629 NEVVVRDPDRLVSRFHLEVHKRKNLYYVIDLDSSNGTYLNGRRLPAGAATRLRSGDRLAL 688
Query: 95 GDCTTISVQM 104
+ + ++Q+
Sbjct: 689 ANAVSFTLQL 698
>gi|254384771|ref|ZP_05000109.1| hypothetical protein SSAG_04228 [Streptomyces sp. Mg1]
gi|194343654|gb|EDX24620.1| hypothetical protein SSAG_04228 [Streptomyces sp. Mg1]
Length = 412
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 25 GSKIRIGR----IVRGNDVTI----KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
GS+I IGR DV + +D G+S +H ++++ G W + D +S NGT +N
Sbjct: 321 GSQITIGRRRASTGESPDVDLSVPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTING 380
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISVQ 103
P P P L + D + +G TTI+V+
Sbjct: 381 GEEPIQPYVPVPLTDGDRVHVGAWTTITVR 410
>gi|254390749|ref|ZP_05005962.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197704449|gb|EDY50261.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 238
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S KH +++ G W + D +S NGT LN P P P L + D + +G
Sbjct: 169 VPPEDPGVSHKHAVLMRQADGSWAVIDQNSTNGTTLNGGEEPIQPYVPVPLNDGDRVHVG 228
Query: 96 DCTTISVQ 103
TTI+++
Sbjct: 229 AWTTITIR 236
>gi|381157720|ref|ZP_09866953.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
gi|380879078|gb|EIC21169.1| FHA domain-containing protein [Thiorhodovibrio sp. 970]
Length = 567
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTI 62
P ++L V GPR GE +E R+GR V DD IS +H + + +G+ +
Sbjct: 469 PQLRLAFVTGPRRGEVVELSVMQPARLGRSADCALVLSGDDEISGRHAEVLCLDNGQRVL 528
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+DL S NGT LN + P L+ D I +G
Sbjct: 529 RDLSSTNGTRLNGVGVQGTHP--LQNGDRIGVG 559
>gi|85109348|ref|XP_962873.1| hypothetical protein NCU06269 [Neurospora crassa OR74A]
gi|28924514|gb|EAA33637.1| predicted protein [Neurospora crassa OR74A]
Length = 790
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGR--------IVRGN-----DVTI 41
P ++ PR+ ++ F P S+ IR+GR +V N V
Sbjct: 384 PSIRFSTFYDPRATRPSLTFSPISRTLPTGKEVIRVGRYSERDKPSVVPHNVPSAAPVGF 443
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 444 KSKVVSRRHCEFWYEDGKWFIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 501
>gi|149043520|gb|EDL96971.1| ring finger protein 8, isoform CRA_a [Rattus norvegicus]
Length = 126
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + GS++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 28 EWLQLEAGSEVTIGR---GFSVTYQLISKVCPLMISRNHCVLKQNPEGQWTIMDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 85 VWLNRERLAPLQGYCIRKGDHIQLG 109
>gi|309792520|ref|ZP_07686983.1| forkhead-associated protein [Oscillochloris trichoides DG-6]
gi|308225423|gb|EFO79188.1| forkhead-associated protein [Oscillochloris trichoides DG6]
Length = 239
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 36 GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
GND+ ++D +S H + + ++ I DL+S NGTF+N+ + T LR+ D I LG
Sbjct: 174 GNDIILEDTRVSRHHAQLRYKARRFWITDLNSTNGTFVNAARI---TETALRDGDLISLG 230
>gi|291439601|ref|ZP_06578991.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291342496|gb|EFE69452.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 341
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G T
Sbjct: 275 EDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTVNGSDEPIQPFVPVPLQDGDRVHVGAWT 334
Query: 99 TISV 102
TI++
Sbjct: 335 TITI 338
>gi|410959046|ref|XP_003986123.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF8
[Felis catus]
Length = 481
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVS 57
G + R E + + G+++ IGR G VT + IS H ++ ++V
Sbjct: 15 GRSWCLRRVGMDAEWLLLEDGNEVTIGR---GFGVTYQLVSKICPLMISRNHCVLKQNVE 71
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 72 GQWTIMDNKSLNGVWLNRQRLEPLNVYSIHKGDHIQLG 109
>gi|423349711|ref|ZP_17327367.1| hypothetical protein HMPREF9156_00905 [Scardovia wiggsiae F0424]
gi|393702582|gb|EJD64786.1| hypothetical protein HMPREF9156_00905 [Scardovia wiggsiae F0424]
Length = 189
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 19/96 (19%)
Query: 8 LIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L ++ GP SG T + GS+ I +GR N V + D+ +SS H + ++ +G+W I+D
Sbjct: 97 LTIIDGPLSGTT--YTLGSQSITLGR-APDNVVVLNDEFVSSHHARVYVDPTTGRWAIED 153
Query: 65 LDSCNGTFLN------STTLPPNTP-------FDLR 87
L S NGT +N S LP P F+LR
Sbjct: 154 LGSTNGTVVNRQRLARSMVLPAGVPVRIGGTTFELR 189
>gi|386840263|ref|YP_006245321.1| hypothetical protein SHJG_4176 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100564|gb|AEY89448.1| hypothetical protein SHJG_4176 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793557|gb|AGF63606.1| hypothetical protein SHJGH_3941 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 518
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G
Sbjct: 449 VPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNMSEEPIQPFVPVPLQDGDRVHVG 508
Query: 96 DCTTISVQ 103
TTI+V+
Sbjct: 509 AWTTITVR 516
>gi|290958973|ref|YP_003490155.1| hypothetical protein SCAB_45481 [Streptomyces scabiei 87.22]
gi|260648499|emb|CBG71610.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 174
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 81 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 138
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ L TP L
Sbjct: 139 GSTNGTYLDRNRLTTPTPIPL 159
>gi|408531815|emb|CCK29989.1| hypothetical protein BN159_5610 [Streptomyces davawensis JCM 4913]
Length = 171
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ +G W + D +S NGT +N + P P P L++ D + +G
Sbjct: 102 VPPEDPGVSHQHAVLVQQPNGSWAVVDQNSTNGTTVNGSEEPIQPFVPVPLQDGDRVHVG 161
Query: 96 DCTTISV 102
TTI++
Sbjct: 162 AWTTITI 168
>gi|365860662|ref|ZP_09400457.1| hypothetical protein SPW_0759 [Streptomyces sp. W007]
gi|364009819|gb|EHM30764.1| hypothetical protein SPW_0759 [Streptomyces sp. W007]
Length = 172
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALH-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L T L TP L
Sbjct: 137 GSTNGTYLERTRLTTPTPVPL 157
>gi|220918571|ref|YP_002493875.1| Fis family sigma-54 specific transcriptional regulator
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219956425|gb|ACL66809.1| sigma54 specific transcriptional regulator, Fis family
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 554
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTPFDLRENDTIKLGD 96
D + D +S++HL +E+ G+W + DL S NGTF++ + PF L ++LGD
Sbjct: 148 DAPLDDAFVSARHLRVEARGGRWALVDLGSTNGTFISGARVTRAELPFGL----PVQLGD 203
Query: 97 CTTI 100
+
Sbjct: 204 AEIV 207
>gi|23956112|ref|NP_067394.1| E3 ubiquitin-protein ligase RNF8 [Mus musculus]
gi|21362895|sp|Q8VC56.1|RNF8_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName:
Full=ActA-interacting protein 37; Short=AIP37; AltName:
Full=LaXp180; AltName: Full=RING finger protein 8
gi|18255721|gb|AAH21778.1| Ring finger protein 8 [Mus musculus]
gi|26345172|dbj|BAC36236.1| unnamed protein product [Mus musculus]
gi|71059919|emb|CAJ18503.1| Rnf8 [Mus musculus]
gi|74151225|dbj|BAE27732.1| unnamed protein product [Mus musculus]
Length = 488
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + G+++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 28 EWLQLEAGTEVTIGR---GLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 85 VWLNRERLAPLQGYCIRKGDHIQLG 109
>gi|405372164|ref|ZP_11027428.1| FHA domain/GGDEF domain protein [Chondromyces apiculatus DSM 436]
gi|397088537|gb|EJJ19518.1| FHA domain/GGDEF domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 293
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ + GP G+ + +++ IGR + N + + D +S +H I GK ++DL S
Sbjct: 26 LVQIHGPELGKKYLIED-AELTIGR-DQHNHIVVDLDNVSRRHARILGRGGKMLVEDLGS 83
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGTFLN + +P LR D +K+G
Sbjct: 84 TNGTFLNDQEVLQASP--LRSGDLVKVG 109
>gi|298246475|ref|ZP_06970281.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297553956|gb|EFH87821.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 695
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
+ ++ K+ +GR G+ + + + IS H I G++ ++DL S NG F+N
Sbjct: 501 QPLQLSKSEKLFVGR-QPGSHLLLDMETISRTHAEIFFTDGRYVLRDLGSTNGIFINGYR 559
Query: 78 LPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVP 128
+PP + L++N+ I G T D+ D + P + + +P
Sbjct: 560 MPPRSVHFLQDNEEISFGSRARFICLCHTHDAPDTAPLAPLKGISEKLPIP 610
>gi|440908120|gb|ELR58178.1| Smad nuclear-interacting protein 1 [Bos grunniens mutus]
Length = 401
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------------IQDLDSCNGTFLNST 76
+GR R D+ I S +H + + ++T I DL S NGTFLN+
Sbjct: 286 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNK 345
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
+ P ++L+E D +K G + ++ +S D S
Sbjct: 346 RIEPQRYYELKEKDVLKFGFSFSSREYVLLHESSDTS 382
>gi|326915348|ref|XP_003203981.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Meleagris
gallopavo]
Length = 496
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 46 ISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS KH + + + G+WT++D S NG +LN L P+ + L E D I+LG
Sbjct: 25 ISRKHCVFQQNAEGQWTVKDNKSLNGVWLNKQRLDPSKTYPLAEGDRIQLG 75
>gi|429195234|ref|ZP_19187277.1| FHA domain protein, partial [Streptomyces ipomoeae 91-03]
gi|428669051|gb|EKX68031.1| FHA domain protein, partial [Streptomyces ipomoeae 91-03]
Length = 284
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G
Sbjct: 215 VPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNGSEEPIQPFVPVPLQDGDRVHVG 274
Query: 96 DCTTISV 102
TTI++
Sbjct: 275 AWTTITI 281
>gi|345570972|gb|EGX53787.1| hypothetical protein AOL_s00004g446 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 4 PGMKLIMVRGPRSGETIE-FKP--------GSKIRIGRIV---RGNDVTIKDDGISSKHL 51
P ++ + PRS F P G +++GR GN V K +S +H
Sbjct: 202 PSIRFVPHVDPRSTRRPHTFAPMERSIKAIGEVVKVGRFSDRDNGNPVGFKSKVVSRRHC 261
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
G W ++D+ S +GTFLN L PNT P+ + + D ++LG
Sbjct: 262 EFWWSDGSWFMKDVGSSSGTFLNHVRLSHPNTESKPYIVHDGDVVQLG 309
>gi|338529907|ref|YP_004663241.1| FHA domain/GGDEF domain-containing protein [Myxococcus fulvus HW-1]
gi|337256003|gb|AEI62163.1| FHA domain/GGDEF domain-containing protein [Myxococcus fulvus HW-1]
Length = 293
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ + GP G+ + +++ IGR + N + + D +S +H I GK ++DL S
Sbjct: 26 LVQIHGPELGKKYLIED-AELTIGR-DQHNHIVVDLDNVSRRHARILGRGGKMLVEDLGS 83
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGTFLN + +P LR D +K+G
Sbjct: 84 TNGTFLNDQEVLQASP--LRSGDLVKVG 109
>gi|148658033|ref|YP_001278238.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Roseiflexus sp. RS-1]
gi|148570143|gb|ABQ92288.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Roseiflexus sp. RS-1]
Length = 899
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 17 GETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS 75
G+T E G + + IGR ND+ I +S +H IE I D+ S NG
Sbjct: 93 GQTFEVALGQQPLSIGR-APDNDIVITSRFVSGRHARIEPHGIAHQIVDIGSTNGLLFEG 151
Query: 76 TTLPPNTPFDLRENDTIKLGDCTT 99
LP NTP L ++D +++GD T
Sbjct: 152 KRLPANTPHVLADSDVLRIGDPAT 175
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
+I IGR G ++ + + +S KH +I+ V+GK ++D+ S NGTF+N + +T L
Sbjct: 209 QITIGR--EGCEILLDNPQVSRKHAVIDRVNGKHVLRDVGSTNGTFVNGRRITEHT---L 263
Query: 87 RENDTIKLG 95
+ D I++G
Sbjct: 264 VKGDIIQIG 272
>gi|17505799|ref|NP_491217.1| Protein C32E8.5 [Caenorhabditis elegans]
gi|373254100|emb|CCD66403.1| Protein C32E8.5 [Caenorhabditis elegans]
Length = 299
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT---- 61
+L +G S + + S IGR + D+ + S +H +++ S +T
Sbjct: 166 WRLYPFKGEESLQVLYIHRQSAYLIGRDHKIADIPVDHPSCSKQHAVLQFRSMPFTRDDG 225
Query: 62 ---------IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDE 112
I DL S NGTFLN + P +L+E D +K G T V M + +E
Sbjct: 226 TKARRIMPYIIDLGSGNGTFLNEKKIEPQRYIELQEKDMLKFGFSTREYVVMKEREITEE 285
Query: 113 SVA 115
+A
Sbjct: 286 ELA 288
>gi|345851664|ref|ZP_08804632.1| hypothetical protein SZN_17917 [Streptomyces zinciresistens K42]
gi|345636870|gb|EGX58409.1| hypothetical protein SZN_17917 [Streptomyces zinciresistens K42]
Length = 172
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 79 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 136
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L+ + L TP L
Sbjct: 137 GSTNGTYLDRSRLTTPTPVPL 157
>gi|367050122|ref|XP_003655440.1| hypothetical protein THITE_2119128 [Thielavia terrestris NRRL 8126]
gi|347002704|gb|AEO69104.1| hypothetical protein THITE_2119128 [Thielavia terrestris NRRL 8126]
Length = 610
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRIV-------------RGNDVTI 41
P ++ PR+ +++F P S+ IR+GR V
Sbjct: 201 PSIRFSTFYDPRATRPSLKFAPVSRTLPTGKEVIRVGRYSERDAQPNVPPNTPSAAPVGF 260
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H +GKW I+D+ S +GTFLN L PP T P+ + + D ++LG
Sbjct: 261 KSKVVSRRHCEFWFENGKWYIKDVKSSSGTFLNHIRLSPPGTESKPYPVNDGDIVQLG 318
>gi|213405219|ref|XP_002173381.1| dma1 [Schizosaccharomyces japonicus yFS275]
gi|212001428|gb|EEB07088.1| dma1 [Schizosaccharomyces japonicus yFS275]
Length = 279
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 20/100 (20%)
Query: 16 SGETIEFKPGSK----------IRIGRIVR----GN--DVTIKDDGISSKHLIIESVSGK 59
+G + F+P + I IGR GN V + +S +H + G+
Sbjct: 47 NGHSFNFEPVVRTWSKKNKNLPIHIGRYTDKYNGGNVSAVVFRSKVVSRRHAQVFYEGGE 106
Query: 60 WTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
W +QDL S +GTFLN L P + P+ + ND ++LG
Sbjct: 107 WYVQDLGSSSGTFLNHIRLSPPCETSKPYHISNNDILQLG 146
>gi|340959658|gb|EGS20839.1| hypothetical protein CTHT_0026770 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 571
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRI--------VRGND-----VTI 41
P ++ PRS +++F P S+ IR+GR V N V
Sbjct: 211 PSIRFSAFIDPRSPRPSLKFNPISRTLPTGKEVIRVGRYSEKENYPPVAPNQPSAAPVGF 270
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H +GKW I+D+ S +GTFLN L PP T PF + + D ++LG
Sbjct: 271 KSKVVSRRHCEFWFENGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFPVNDGDIVQLG 328
>gi|325184410|emb|CCA18902.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 823
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII-------ESVSG 58
+L + +G S T+ S +GR D+ + S +H +I E+ +G
Sbjct: 709 WRLYVFKGEASIATLHIYSKSAFLVGRDKTVADILTEHSSCSKQHAVIQFRLFQKENKTG 768
Query: 59 KW------TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ I DL S NGTFLN + + +LRE D ++ G+ T
Sbjct: 769 TYISEVRPYILDLQSTNGTFLNGERIESSRYIELREKDLLRFGEST 814
>gi|310825165|ref|YP_003957523.1| FHA domain containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309398237|gb|ADO75696.1| FHA domain containing protein [Stigmatella aurantiaca DW4/3-1]
Length = 300
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F GS+ +GR R D+ +++ +S +H + + W ++DL S NGTFL L P
Sbjct: 12 FTLGSRCLLGRHPR-CDIRLEEARVSGEHASVHWLGTGWELRDLGSRNGTFLEGRQLAPG 70
Query: 82 TPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSG--- 138
L T +LG SQ+ R P +A P + R S
Sbjct: 71 ERVALEAGQTFRLG------------RSQESFTLVDARPPTARAWSPQSGMCREASESLL 118
Query: 139 RKKAEAEPVETLGLEG 154
+ + EP+ +L L+G
Sbjct: 119 QLPDDEEPLASLFLDG 134
>gi|224111242|ref|XP_002315790.1| predicted protein [Populus trichocarpa]
gi|222864830|gb|EEF01961.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVS--GKWTI 62
+ L ++ GP SG + S + +GR+ +D+ +KD +S KH +I + KW +
Sbjct: 180 LSLEVISGPSSGLRCSVQSISGPLTLGRV--SSDLLLKDSEVSGKHAMINWNADKNKWEL 237
Query: 63 QDLDSCNGTFLNSTTLP-PNT-------PFDLRENDTIKLGDCTTISVQMIT 106
D+ S NGT LNS + P++ P +L D I LG + + V + +
Sbjct: 238 VDMGSLNGTLLNSQLISHPDSGSRLWGDPVELSNGDIITLGTTSNVHVHVTS 289
>gi|375108211|ref|ZP_09754472.1| FHA domain-containing protein [Burkholderiales bacterium JOSHI_001]
gi|374668942|gb|EHR73727.1| FHA domain-containing protein [Burkholderiales bacterium JOSHI_001]
Length = 231
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H +++ V I+DL+S NGT++N + L NDT+++G
Sbjct: 31 NDIVIDNLAVSGEHAVLQMVGQDVFIEDLNSTNGTYINGKAIKKQL---LVHNDTVEIGK 87
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVETLGLEG 154
++ + DES K R PGT A+SG + V L G
Sbjct: 88 Y---KIKYLL----DESGEYEKTMVMR----PGTQGAAASSGHASGFSHTVAASALSG 134
>gi|442319829|ref|YP_007359850.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487471|gb|AGC44166.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 356
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L ++ GPR GE IE +I IGR + D+ IKDD S KH I ++DL S
Sbjct: 137 LRIMNGPREGERIEIGDAQEIVIGRDEKEADLVIKDDLTSRKHAKIRRDWSGTHVEDLGS 196
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
NG +N + L++ND +++G + V
Sbjct: 197 RNGIKVNKKRVNRKA---LKDNDEVEVGGTRFLYV 228
>gi|124512898|ref|XP_001349805.1| fork head domain protein, putative [Plasmodium falciparum 3D7]
gi|23615222|emb|CAD52212.1| fork head domain protein, putative [Plasmodium falciparum 3D7]
Length = 561
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 2 EPPGMK--LIMVRGPRSGE---TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV 56
E P K L M + + E + S IG+ D+ + + IS +H +I+
Sbjct: 443 EKPDKKWRLYMFKDSNNNEPQKILHIHDKSYYLIGKEQLAVDIQLNNISISKQHAVIQFK 502
Query: 57 SGKWTIQ----DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ I DL+S NGT++N+ + PN ++LRE D I+ G
Sbjct: 503 KHESKILPFLLDLNSTNGTYINNEKIQPNKYYELRETDIIRFG 545
>gi|355689334|gb|AER98799.1| FtsJ methyltransferase domain containing 2 [Mustela putorius furo]
Length = 962
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 26/115 (22%)
Query: 1 MEPPGMKLIMVRGPRSG-------------ETIEFKPGSKIRIGRIVRGNDVTIKDDG-- 45
ME PG +V G R+G E + + G+++ IGR G VT +
Sbjct: 1 MEEPGS---LVMGDRAGGRSWCLRRVGMNAEWLLLEDGNEVTIGR---GFGVTYQLVSKI 54
Query: 46 ----ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++V G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 55 CPLMISRNHCVLKQNVEGQWTIMDNKSLNGVWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|390346100|ref|XP_788216.3| PREDICTED: E3 ubiquitin-protein ligase RNF8-like
[Strongylocentrotus purpuratus]
Length = 646
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIK------DDGISSKHLIIESVS-GKWTIQDLDSCNGTF 72
I K G +I +GR G DV+I+ + +S KH + + G WT+ D S NG
Sbjct: 24 IPLKNGEEITVGR---GMDVSIQLLASQNNLFLSRKHCTFKQLEEGSWTVIDNRSLNGVR 80
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISVQ-----MITMDSQDESVAKPKRNPRRQA 125
+N + + P P LR D ++LG V + D E V K R+ +R+A
Sbjct: 81 INDSRIAPMEPATLRNGDKLELGQANKGQVNEFIFTVCAADHSSEEVDKLLRSWKRRA 138
>gi|423223222|ref|ZP_17209691.1| hypothetical protein HMPREF1062_01877 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392639323|gb|EIY33148.1| hypothetical protein HMPREF1062_01877 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 190
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 46 ISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
+S H ++ S SG+W I DLDS NGTF+N L PN P D +++ +
Sbjct: 133 VSGTHARLQKSASGQWEIVDLDSTNGTFVNGNRLSPNVPAVFSIGDIVRIAN 184
>gi|381399883|ref|ZP_09924900.1| Forkhead-associated protein [Microbacterium laevaniformans OR221]
gi|380772846|gb|EIC06533.1| Forkhead-associated protein [Microbacterium laevaniformans OR221]
Length = 183
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 7 KLIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
++++ GP++G +E GS+ + IGR + + I+DD SS H + +W IQDL
Sbjct: 91 RIVITSGPKAG--LELPLGSEALTIGR-SSESGLVIRDDYTSSHHARLLLWGDQWMIQDL 147
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
DS NGT+ + + +TP +R IK+G T
Sbjct: 148 DSTNGTWHDGARV--STPVPVRVGAPIKVGATT 178
>gi|348517642|ref|XP_003446342.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Oreochromis
niloticus]
Length = 550
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ES 55
P ++R R+ + + ++I IGR G DVT + IS H +S
Sbjct: 18 PDSEVFCLMRVGRNSDWLRLFENTEITIGR---GVDVTYQLLSPACPLMISRLHCTFKQS 74
Query: 56 VSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G WT+ D S NG ++N T LP + LR D+I+LG
Sbjct: 75 EDGHWTVTDKKSLNGVWVNGTRLPSDESRQLRLGDSIQLG 114
>gi|404421622|ref|ZP_11003335.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
gi|403658777|gb|EJZ13478.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
Length = 877
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + IGR +R DV I IS HL++ G+W D S NG + N
Sbjct: 11 GSTRTFAPGNDVVIGRDLRA-DVRIAHPLISRAHLVLRFDQGRWIAIDNGSLNGMYANGR 69
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+P D+ + + +G+
Sbjct: 70 RVP---TIDIHDGQVVNIGN 86
>gi|29831915|ref|NP_826549.1| hypothetical protein SAV_5372 [Streptomyces avermitilis MA-4680]
gi|29609032|dbj|BAC73084.1| hypothetical protein SAV_5372 [Streptomyces avermitilis MA-4680]
Length = 481
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 25 GSKIRIGRIVRGN--------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
G++I IGR V +D G+S +H ++++ G W + D +S NGT +N
Sbjct: 390 GNQISIGRRRHSTGDTPDIDLSVPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNG 449
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISVQ 103
P P P L++ D + +G TTI+++
Sbjct: 450 AEEPIQPFVPIPLQDGDRVHVGAWTTITIR 479
>gi|404380181|ref|ZP_10985219.1| hypothetical protein HMPREF9021_02064 [Simonsiella muelleri ATCC
29453]
gi|294482376|gb|EFG30070.1| hypothetical protein HMPREF9021_02064 [Simonsiella muelleri ATCC
29453]
Length = 640
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 18 ETIEFKPGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
TI P I +GR R + DV + +S +HL + +G +QDL S NGTF+N
Sbjct: 426 NTIAVPPNRAITVGR--RNDCDVVLNHAKVSGQHLKLWIDNGAVWVQDLGSTNGTFVNGA 483
Query: 77 TLPPNTPFDLRENDTIKL-GDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGT 130
+ T L ND ++L D + S ++ T SQ + A PR Q + P T
Sbjct: 484 AIHSAT--RLMPNDVLQLTADDSVASFRLPTSSSQSNTPA-----PRTQLHQPNT 531
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIES-VSGKWTIQDLDSCNGTFLNST 76
+ IGR NDV I IS KH I S G T+QDL S NGTF+++T
Sbjct: 562 LNIGR-ASDNDVIINQPQISGKHCNIGSDAHGNLTLQDLGSTNGTFVDNT 610
>gi|334340860|ref|YP_004545840.1| forkhead-associated protein [Desulfotomaculum ruminis DSM 2154]
gi|334092214|gb|AEG60554.1| Forkhead-associated protein [Desulfotomaculum ruminis DSM 2154]
Length = 259
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + D+ IS +H IE +G++ I DL+S NGTF+N P +L D I +G+
Sbjct: 196 DIVLSDNSISRRHAQIEKNAGRYWISDLNSTNGTFVNGL---PIEKHELTSGDAITMGNT 252
Query: 98 TTI 100
I
Sbjct: 253 VLI 255
>gi|349953948|dbj|GAA40738.1| smad nuclear-interacting protein 1 [Clonorchis sinensis]
Length = 286
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSG--KWT 61
+L +G + S IGR + D+ + IS +H +++ V G +
Sbjct: 168 WRLYQFKGNECLPILHIHRQSGFLIGRDRKIADIPMDHPSISKQHAVLQYRFVRGLVRLY 227
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP 117
+ DL+S NGT+LN+ + P ++L + D IK G + V M T + +E + P
Sbjct: 228 VIDLESANGTYLNNKRIEPRRYYELLQKDVIKFGYSSREYVVM-TANLDEEEMGTP 282
>gi|239916642|ref|YP_002956200.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
gi|281414901|ref|ZP_06246643.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
gi|239837849|gb|ACS29646.1| FHA domain-containing protein [Micrococcus luteus NCTC 2665]
Length = 186
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L +V GP++G+TI + G + +GR + D+ + DD S +H + +W ++DL S
Sbjct: 95 LRVVEGPKAGQTIALE-GRPLLMGR-AQDADLVLVDDYASGRHARLFPQGTRWFLEDLGS 152
Query: 68 CNGTFLN 74
NGT++N
Sbjct: 153 TNGTYVN 159
>gi|115375726|ref|ZP_01462980.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115367289|gb|EAU66270.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 313
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F GS+ +GR R D+ +++ +S +H + + W ++DL S NGTFL L P
Sbjct: 25 FTLGSRCLLGRHPR-CDIRLEEARVSGEHASVHWLGTGWELRDLGSRNGTFLEGRQLAPG 83
Query: 82 TPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSG--- 138
L T +LG SQ+ R P +A P + R S
Sbjct: 84 ERVALEAGQTFRLG------------RSQESFTLVDARPPTARAWSPQSGMCREASESLL 131
Query: 139 RKKAEAEPVETLGLEG 154
+ + EP+ +L L+G
Sbjct: 132 QLPDDEEPLASLFLDG 147
>gi|15893697|ref|NP_347046.1| FHA domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337735619|ref|YP_004635066.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384457130|ref|YP_005669550.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|15023258|gb|AAK78386.1|AE007555_6 Predicted membrane protein, containing FHA domain [Clostridium
acetobutylicum ATCC 824]
gi|325507819|gb|ADZ19455.1| membrane protein, containing FHA domain [Clostridium acetobutylicum
EA 2018]
gi|336290089|gb|AEI31223.1| FHA domain-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 516
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+IGR+ D + I H I ++ ++ + DLDS NGTF+N L N + +
Sbjct: 440 FKIGRLTGSVDYVSDNRAIGKMHAEIRKINSEYYLMDLDSKNGTFINDRRLESNELYKIS 499
Query: 88 ENDTIKLGDCTT 99
END +K +
Sbjct: 500 ENDILKFANSYY 511
>gi|414588921|tpg|DAA39492.1| TPA: hypothetical protein ZEAMMB73_376807 [Zea mays]
Length = 381
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
I +GR V +D+ +KD +S KH I + + KW + D+ S NGTFLNS + P+
Sbjct: 4 ITLGR-VPPSDLVLKDSEVSGKHAQINWNAKTLKWELVDMGSLNGTFLNSQAVHHPDAES 62
Query: 83 -----PFDLRENDTIKLGDCTTISVQMITMDSQ 110
P +L D I LG + +SVQ IT+ +Q
Sbjct: 63 RHWGEPAELAHGDIITLGTSSKLSVQ-ITLQNQ 94
>gi|256004302|ref|ZP_05429284.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|385778274|ref|YP_005687439.1| forkhead-associated protein [Clostridium thermocellum DSM 1313]
gi|419722168|ref|ZP_14249316.1| Forkhead-associated protein [Clostridium thermocellum AD2]
gi|419724266|ref|ZP_14251334.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|255991736|gb|EEU01836.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|316939954|gb|ADU73988.1| Forkhead-associated protein [Clostridium thermocellum DSM 1313]
gi|380772272|gb|EIC06124.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|380781739|gb|EIC11389.1| Forkhead-associated protein [Clostridium thermocellum AD2]
Length = 520
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR+ D +++ + H I S G++ ++DL+S NGTF+N + NT ++++ N
Sbjct: 446 IGRLKSQVDYISQNNAVGKVHAEIISRDGRYFVKDLNSKNGTFVNGVRIAANTEYEIKNN 505
Query: 90 DTIKLGDCTTISV 102
D I + + +
Sbjct: 506 DKITFANSEYVFI 518
>gi|309810410|ref|ZP_07704244.1| ABC transporter, ATP-binding protein [Dermacoccus sp. Ellin185]
gi|308435650|gb|EFP59448.1| ABC transporter, ATP-binding protein [Dermacoccus sp. Ellin185]
Length = 854
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G + +PG IGR R D+TI D +S +H + + W ++DLDS NGT+++
Sbjct: 5 GHVVRLQPGESATIGR-GRDCDITIVDVDVSRRHAQVSAQGEGWQVRDLDSSNGTWVDGQ 63
Query: 77 TLPPNTPFDLRENDTIKLG 95
+ + DLR + ++LG
Sbjct: 64 RV--HGYRDLRGGEDVRLG 80
>gi|392945871|ref|ZP_10311513.1| FHA domain-containing protein [Frankia sp. QA3]
gi|392289165|gb|EIV95189.1| FHA domain-containing protein [Frankia sp. QA3]
Length = 165
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KL++ +G +G TI + + IGR + + + ++DD S +H + G+W ++DL
Sbjct: 73 KLVVTKGHLAGTTIPLG-SAPVTIGR-AQDSTLVLEDDFASGRHARLVPHDGQWFVEDLG 130
Query: 67 SCNGTFLN 74
S NGTFLN
Sbjct: 131 STNGTFLN 138
>gi|456390788|gb|EMF56183.1| hypothetical protein SBD_3496 [Streptomyces bottropensis ATCC
25435]
Length = 581
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 25 GSKIRIGR------IVRGNDVTI--KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
G++I IGR V D+++ +D G+S +H ++++ G W + D +S NGT +N
Sbjct: 490 GNQITIGRRRHSTGDVPDIDLSVPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTVNG 549
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISVQ 103
+ P P P L++ D + +G TTI+++
Sbjct: 550 SEEPIQPFVPIPLQDGDRVHVGAWTTITIR 579
>gi|309790680|ref|ZP_07685231.1| forkhead-associated protein [Oscillochloris trichoides DG-6]
gi|308227274|gb|EFO80951.1| forkhead-associated protein [Oscillochloris trichoides DG6]
Length = 250
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 45 GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
G+ +H I SG I+DL+S NGTFLN+T + P P LR D ++LG + VQM
Sbjct: 192 GVGRRHARIFLQSGLVLIEDLNSTNGTFLNTTRVQPGHPQTLRSGDEVRLGT-LVMKVQM 250
>gi|281418010|ref|ZP_06249030.1| FHA domain containing protein [Clostridium thermocellum JW20]
gi|281409412|gb|EFB39670.1| FHA domain containing protein [Clostridium thermocellum JW20]
Length = 520
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR+ D +++ + H I S G++ ++DL+S NGTF+N + NT ++++ N
Sbjct: 446 IGRLKSQVDYISQNNAVGKVHAEIISRDGRYFVKDLNSKNGTFVNGVRIAANTEYEIKNN 505
Query: 90 DTIKLGDCTTISV 102
D I + + +
Sbjct: 506 DKITFANSEYVFI 518
>gi|125973849|ref|YP_001037759.1| FHA domain-containing protein [Clostridium thermocellum ATCC 27405]
gi|125714074|gb|ABN52566.1| Forkhead-associated protein [Clostridium thermocellum ATCC 27405]
Length = 520
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR+ D +++ + H I S G++ ++DL+S NGTF+N + NT ++++ N
Sbjct: 446 IGRLKSQVDYISQNNAVGKVHAEIISRDGRYFVKDLNSKNGTFVNGVRIAANTEYEIKNN 505
Query: 90 DTIKLGDCTTISV 102
D I + + +
Sbjct: 506 DKITFANSEYVFI 518
>gi|428308693|ref|YP_007119670.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
gi|428250305|gb|AFZ16264.1| family 3 adenylate cyclase [Microcoleus sp. PCC 7113]
Length = 535
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 30 IGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
IGR+ N + + +GIS H ++++ SG WTI+D+ S NGT +N P +P +++
Sbjct: 26 IGRLPECN-LNLPFEGISRYHARLLKTASGVWTIEDMGSKNGTLMNKR--PVISPEKIKD 82
Query: 89 NDTIKLGDCTTISVQMITMD 108
D I LGD IS+ +I ++
Sbjct: 83 GDVIWLGD---ISLAVILVE 99
>gi|8052306|emb|CAB92239.1| AIP37 protein [Mus musculus]
Length = 275
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + G+++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 55 EWLQLEAGTEVTIGR---GLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNG 111
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 112 VWLNRERLAPLQGYCIRKGDHIQLG 136
>gi|167036993|ref|YP_001664571.1| FHA domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115411|ref|YP_004185570.1| Forkhead-associated protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166855827|gb|ABY94235.1| FHA domain containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319928502|gb|ADV79187.1| Forkhead-associated protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 134
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ I+ +S++H II ++ IQDL+S NGTF+N + +R ND I LGD
Sbjct: 71 DIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFINGKRIKGIAK--IRNNDVITLGDV 128
>gi|452845075|gb|EME47008.1| hypothetical protein DOTSEDRAFT_69102 [Dothistroma septosporum
NZE10]
Length = 584
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 24 PGSKIRIGRIV-RGNDVTIKDDG---------ISSKHLIIESVSGKWTIQDLDSCNGTFL 73
PGS +R+GR R N+ T D+ +S +H G+W I+D+ S +GTFL
Sbjct: 207 PGSVVRVGRYSERDNNPTNADNDLPVGFKSKVVSRRHCEFWCTDGQWYIKDVKSSSGTFL 266
Query: 74 NSTTLPP----NTPFDLRENDTIKLG 95
N L + P+ + + D ++LG
Sbjct: 267 NHVRLSSPGLESRPYPVNDGDIVQLG 292
>gi|328874119|gb|EGG22485.1| hypothetical protein DFA_04613 [Dictyostelium fasciculatum]
Length = 543
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 7 KLIMVRGPRSGET--IEFKPGSKIRIGRIVRGNDVTIKDDGISSKH-LIIESVSGKWTIQ 63
L V+G S + I + + GR D + +S KH I G+ +
Sbjct: 130 HLRFVKGGESSHSSIISLEESKFVVFGRSSSVCDYIFSNPTVSRKHCFIAHDFEGRIQVV 189
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
D S +GTF+N T PN P+ LR D + LG+ T+ V
Sbjct: 190 DFGSSHGTFINKTRAVPNRPYILRHGDKLYLGNDTSYLV 228
>gi|417750785|ref|ZP_12399134.1| ABC-type multidrug transport system, ATPase component, partial
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336457706|gb|EGO36706.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 460
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F G+ + IGR +R D+ + IS HLI+ G+W
Sbjct: 1 MSPPATPALTVR--YDGAERTFAAGNDVVIGRDLRA-DLRVAHPLISRTHLIVRYEQGRW 57
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG ++N+ +P
Sbjct: 58 VAIDNGSLNGLYVNNRRVP 76
>gi|308233726|ref|ZP_07664463.1| FHA domain containing protein [Atopobium vaginae DSM 15829]
gi|328944052|ref|ZP_08241517.1| hypothetical protein HMPREF0091_10742 [Atopobium vaginae DSM 15829]
gi|327492021|gb|EGF23795.1| hypothetical protein HMPREF0091_10742 [Atopobium vaginae DSM 15829]
Length = 146
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS---GK 59
P L +V+GP++G E I IGR N V + D +S KH I+ S G
Sbjct: 35 PAYPTLAIVKGPQTGMVFELN-SQFITIGR-DPSNSVFLNDMTVSRKHACIDFTSLNQGY 92
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP 117
TI+DL+S NGT+++ + N F L++ TI++G + +MI ++ S++ P
Sbjct: 93 ATIEDLNSLNGTWIDGAIV--NKAF-LKDGSTIQIG-----TFRMIFHTNKPASLSNP 142
>gi|67536924|ref|XP_662236.1| hypothetical protein AN4632.2 [Aspergillus nidulans FGSC A4]
gi|40741244|gb|EAA60434.1| hypothetical protein AN4632.2 [Aspergillus nidulans FGSC A4]
gi|259482533|tpe|CBF77106.1| TPA: cytoplasm to vacuole targeting Vps64, putative
(AFU_orthologue; AFUA_2G02420) [Aspergillus nidulans
FGSC A4]
Length = 746
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKH--LIIESVSGKWTIQDLDSCNG 70
T+ + P + +RIGR V +G +S +H + + +GK I+D+ S NG
Sbjct: 181 TLPYFPET-LRIGRQTNAKTVPTSKNGFFDSKVLSRQHAEIWADRATGKVLIRDVKSSNG 239
Query: 71 TFLNSTTLPP----NTPFDLRENDTIKLG 95
TFLN L P + ++RENDT++LG
Sbjct: 240 TFLNGQRLSPENRESEAHEIRENDTLELG 268
>gi|50510567|dbj|BAD32269.1| mKIAA0646 protein [Mus musculus]
Length = 749
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + G+++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 58 EWLQLEAGTEVTIGR---GLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNG 114
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 115 VWLNRERLAPLQGYCIRKGDHIQLG 139
>gi|383780502|ref|YP_005465068.1| hypothetical protein AMIS_53320 [Actinoplanes missouriensis 431]
gi|381373734|dbj|BAL90552.1| hypothetical protein AMIS_53320 [Actinoplanes missouriensis 431]
Length = 210
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 24 PGSKIRIGRIVRGN------DVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS- 75
P ++RIGR + D+T D G+S H L+ ++ G+W + DL S NGT+LN+
Sbjct: 120 PAPQVRIGRRSSSHGTAPDLDLT-GDPGVSHNHALLTLTIDGQWLLSDLGSTNGTYLNAE 178
Query: 76 -TTLPPNTPFDLRENDTIKLGDCTTISVQ 103
T L L++ D + +G TTI++
Sbjct: 179 DTPLTAGQSRTLKDGDQVHVGIWTTITLH 207
>gi|392939400|ref|ZP_10305044.1| FHA domain-containing protein [Thermoanaerobacter siderophilus SR4]
gi|392291150|gb|EIV99593.1| FHA domain-containing protein [Thermoanaerobacter siderophilus SR4]
Length = 134
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ I+ +S++H II ++ IQDL+S NGTF+N + +R ND I LGD
Sbjct: 71 DIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRIKGIAK--IRNNDVITLGDV 128
>gi|357590515|ref|ZP_09129181.1| hypothetical protein CnurS_09964 [Corynebacterium nuruki S6-4]
Length = 171
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
L++ GP +G T++ +I +GR G + ++DD S H + W ++DLD
Sbjct: 78 SLVLTSGPLTGTTLDLAGYEEITVGRST-GCTLVLEDDFASGTHARLHRRGEDWYLEDLD 136
Query: 67 SCNGTFLN 74
S NGTFL+
Sbjct: 137 SRNGTFLD 144
>gi|345854384|ref|ZP_08807217.1| hypothetical protein SZN_30924 [Streptomyces zinciresistens K42]
gi|345634144|gb|EGX55818.1| hypothetical protein SZN_30924 [Streptomyces zinciresistens K42]
Length = 363
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L++ D + +G
Sbjct: 294 VPPEDPGVSHQHAVLVQQPDGTWAVVDQNSTNGTTVNGAEDPIQPFVPVPLQDGDRVHVG 353
Query: 96 DCTTISV 102
TTI++
Sbjct: 354 AWTTITI 360
>gi|396476638|ref|XP_003840079.1| hypothetical protein LEMA_P108650.1 [Leptosphaeria maculans JN3]
gi|312216650|emb|CBX96600.1| hypothetical protein LEMA_P108650.1 [Leptosphaeria maculans JN3]
Length = 771
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGR-------------IVRGNDVTI 41
P ++ I + PR+G +++F ++ IR+GR + V
Sbjct: 368 PSIRFIPHQDPRAGRPSLQFPTITRTLPDESAVIRVGRYSERDNLPEIPSHVPSAAAVGF 427
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
K +S KH + G W I+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 428 KSKVVSRKHCELWCKDGSWYIKDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 485
>gi|213691004|ref|YP_002321590.1| FHA domain-containing protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384198103|ref|YP_005583846.1| hypothetical protein [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213522465|gb|ACJ51212.1| FHA domain containing protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320457055|dbj|BAJ67676.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 174
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTIQDL 65
L+++ GP +G ++ + I +GR N V + D+ +SS+H + + SG+W I+DL
Sbjct: 82 LVIIDGPLAGSSVPLS-DADITLGR-AASNTVVLDDEFVSSRHARVYRDIRSGQWAIEDL 139
Query: 66 DSCNGTFLNS------TTLPPNTP-------FDLR 87
+S NGT +N T LP P F+LR
Sbjct: 140 NSTNGTVVNQQRINRPTILPARIPVRIGATTFELR 174
>gi|118489264|gb|ABK96437.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 220
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
S++ +GR+ D+ I +S+ H I++ G + DLDS NGTF++ LPP
Sbjct: 109 SEVTVGRLPDKADMVIPVATVSALHARIQNKGGNLVVTDLDSTNGTFIDKKRLPPGASVS 168
Query: 86 LRENDTIKLGDCTTISVQMITMDSQDES 113
+ I GD T +++ +++ ++ ES
Sbjct: 169 VSPGSRITFGD-THLAMFLVSKLAKVES 195
>gi|444915845|ref|ZP_21235970.1| hypothetical protein D187_08252 [Cystobacter fuscus DSM 2262]
gi|444712839|gb|ELW53752.1| hypothetical protein D187_08252 [Cystobacter fuscus DSM 2262]
Length = 739
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
G L + GP + + + K+ +GR V + DD +S +H +E ++D
Sbjct: 162 GFVLKGLTGPWANQKYPLQ--GKLVVGRQAPAT-VLLDDDSVSRRHAEVELGPDGPVLRD 218
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
L S NGT LN + P P DL+ D I G
Sbjct: 219 LGSANGTLLNGERVAPQEPLDLQPGDVITFG 249
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M +++R P E+ E + ++R+GR ND+T+ + G+S +H G ++D+
Sbjct: 1 MPTLVIRHPDGSES-EQELSGELRVGRQEGTNDLTLAEGGVSRRHARFFEEDGTVMVEDV 59
Query: 66 DSCNGTFLN------STTLPPNT 82
S NGTF++ +T L P +
Sbjct: 60 GSANGTFVDGQRITGATALTPTS 82
>gi|153006978|ref|YP_001381303.1| diguanylate cyclase [Anaeromyxobacter sp. Fw109-5]
gi|152030551|gb|ABS28319.1| diguanylate cyclase [Anaeromyxobacter sp. Fw109-5]
Length = 312
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLD 66
L+++ GP+ G+ PG I +GR D+ I D+ +S +H I SG ++DLD
Sbjct: 28 LLVLSGPQFGDVFPLSPGRDIVVGR-REDADLRIVDEAVSRRHAAIRIEGSGVVLLRDLD 86
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
S NGT+++ + L + I++G TT+
Sbjct: 87 SANGTWVDGRRIAEER---LSDGARIQIGGATTM 117
>gi|431916804|gb|ELK16564.1| E3 ubiquitin-protein ligase RNF8 [Pteropus alecto]
Length = 548
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCN 69
E + + G+++ IGR G VT + IS H ++ ++ G+WTI D +S N
Sbjct: 27 AEWLLLEDGNEVTIGR---GFGVTYQLVSKLCPLMISRNHCVLKQNADGQWTIMDNESLN 83
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLG 95
G +LN L P + + + D I+LG
Sbjct: 84 GVWLNRVRLEPLKVYSIHKGDHIQLG 109
>gi|333369880|ref|ZP_08461968.1| FHA domain protein [Psychrobacter sp. 1501(2011)]
gi|332969116|gb|EGK08152.1| FHA domain protein [Psychrobacter sp. 1501(2011)]
Length = 383
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
+E K K+ +GR + NDV + +S +H + V+ + ++QDL S NGT +N L
Sbjct: 21 LELKIEDKLTVGR-GQDNDVVLGSKQVSRQHAELTVVNDQLSVQDLGSSNGTLVNDEKLV 79
Query: 80 PNTPFDLRENDTIKLG 95
P+ P L++ D I
Sbjct: 80 PHEPKILKDADVITFA 95
>gi|126644061|ref|XP_001388182.1| fork head domain protein [Cryptosporidium parvum Iowa II]
gi|126117259|gb|EAZ51359.1| fork head domain protein, putative [Cryptosporidium parvum Iowa II]
Length = 195
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK-----WTIQDLDSCNGT 71
ETI IG+ R ++ +K+D I +H +I+ K I DLDS GT
Sbjct: 98 NETIPLYNNEYYLIGKDARVVNINLKEDSIEDQHAVIQHRVNKKGIPTIYIIDLDSKYGT 157
Query: 72 FLNSTTLPPNTPFDLRENDTIKLGDC 97
F+N + ++L E D+I+ G+C
Sbjct: 158 FINDERIESRRYYELIEKDSIRFGEC 183
>gi|406877599|gb|EKD26772.1| hypothetical protein ACD_79C01021G0002 [uncultured bacterium]
Length = 174
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG-KWTIQDLDSCNGTFLNSTTLPPNTP 83
G+ I +GR N+VT++D +S KH +I +SG + TI+DL+S NGT++N + T
Sbjct: 97 GNHIVLGR-SPSNEVTVEDQRVSEKHALITIISGEQITIKDLNSTNGTYVNDRKI---TE 152
Query: 84 FDLRENDTIKLG 95
+L E+D I +G
Sbjct: 153 TNLCEDDLISIG 164
>gi|160878201|ref|YP_001557169.1| FHA domain-containing protein [Clostridium phytofermentans ISDg]
gi|160426867|gb|ABX40430.1| FHA domain containing protein [Clostridium phytofermentans ISDg]
Length = 580
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
+TIE K IG ++ + +S H +E ++ + DLDS NGTF+N
Sbjct: 493 DTIEIKE-YPFYIGTAKNNLGYSLINTAVSRYHAKLEKDESRFILTDLDSTNGTFVNGRK 551
Query: 78 LPPNTPFDLRENDTIKLGDCTTI 100
L PN F++++ DT+ + I
Sbjct: 552 LMPNENFEIKQGDTVSFANIGFI 574
>gi|440698642|ref|ZP_20880976.1| hypothetical protein STRTUCAR8_04011, partial [Streptomyces
turgidiscabies Car8]
gi|440278920|gb|ELP66885.1| hypothetical protein STRTUCAR8_04011, partial [Streptomyces
turgidiscabies Car8]
Length = 214
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N++ P P P L++ D + +G
Sbjct: 145 VPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNNSEEPIQPFVPVPLQDGDRVHVG 204
Query: 96 DCTTISV 102
TTI++
Sbjct: 205 AWTTITI 211
>gi|302533691|ref|ZP_07286033.1| ABC transporter ATP-binding protein [Streptomyces sp. C]
gi|302442586|gb|EFL14402.1| ABC transporter ATP-binding protein [Streptomyces sp. C]
Length = 804
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G +RIGR + N++ + D +S H S G++ I DL S NGT++N LP +
Sbjct: 150 GRVMRIGRALE-NELVVSDLQVSRHHAEFRSTGGRFEIHDLGSHNGTYVNGQPLPKSGTA 208
Query: 85 DLRENDTIKLGDCT 98
L ND + +G T
Sbjct: 209 LLGPNDIVGVGHST 222
>gi|383456918|ref|YP_005370907.1| type II/IV secretion system protein [Corallococcus coralloides
DSM 2259]
gi|380732989|gb|AFE08991.1| type II/IV secretion system protein [Corallococcus coralloides
DSM 2259]
Length = 584
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
P ++I IGRI GND+ + +S H I G++ I D+ S NGTF+N + P
Sbjct: 19 PKNEITIGRIA-GNDIVLAKGNVSKTHSRIVEKDGRFIIVDMKSTNGTFVNGKKIA--GP 75
Query: 84 FDLRENDTIKLGD 96
L+ D + +GD
Sbjct: 76 MVLKPTDQVSIGD 88
>gi|367027690|ref|XP_003663129.1| hypothetical protein MYCTH_2315227 [Myceliophthora thermophila ATCC
42464]
gi|347010398|gb|AEO57884.1| hypothetical protein MYCTH_2315227 [Myceliophthora thermophila ATCC
42464]
Length = 458
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRIVRGND-------------VTI 41
P ++ PR+ +++F P S+ IR+GR ++ V
Sbjct: 27 PSIRFSTFYDPRATRPSLKFSPISRTLPTGKEVIRVGRYSERDNQPNVPPNTPSAAPVGF 86
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L PP T P+ + + D ++LG
Sbjct: 87 KSKVVSRRHCEFWYEDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPYPVNDGDIVQLG 144
>gi|455647627|gb|EMF26566.1| hypothetical protein H114_23406, partial [Streptomyces gancidicus
BKS 13-15]
Length = 234
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G T
Sbjct: 168 EDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNGSEEPIQPFVPVPLQDGDRVHVGAWT 227
Query: 99 TISV 102
TI++
Sbjct: 228 TITI 231
>gi|169409938|gb|ACA57835.1| kinase-associated protein phosphatase [Lotus japonicus]
gi|169409944|gb|ACA57838.1| kinase-associated protein phosphatase [Lotus japonicus]
Length = 591
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFK---PGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G + P S + +GR V +D+ IKD +S KH +I+ K
Sbjct: 185 LTLEVISGPSCGLRYSVQSTNPSSLPLTLGR-VPPSDLLIKDSEVSGKHALIKWNMDKMK 243
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGTFLNS ++ P+T P +L D I LG + + V +
Sbjct: 244 WELVDMGSLNGTFLNSKSINHPDTESRHWGDPINLANGDIITLGTTSKVIVHI 296
>gi|375337498|ref|ZP_09778842.1| FHA domain-containing protein [Succinivibrionaceae bacterium WG-1]
Length = 327
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
K I +GR N + +S +H I K I+DL+S NGT++N+ + PN
Sbjct: 230 LKNNECIEVGREQVLNHFLQGHNCVSRRHAKISLQQNKLVIEDLESKNGTYINNQPIKPN 289
Query: 82 TPFDLRENDTIKLG 95
TP +L+ D + LG
Sbjct: 290 TPTELKPRDEVTLG 303
>gi|162451174|ref|YP_001613541.1| diguanylate cyclase [Sorangium cellulosum So ce56]
gi|161161756|emb|CAN93061.1| GGDEF domain protein [Sorangium cellulosum So ce56]
Length = 298
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+++ G G I G+ I GR ++ D+ + DD +S +H I + ++DL S
Sbjct: 32 LVVIYGTELGRRIALGTGA-IECGRAIQ-TDIPLDDDAVSRRHARISWTGMSYVVRDLGS 89
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT++N ++ L++ D +K+G
Sbjct: 90 TNGTYVNDVSVDERA---LKDGDQVKIG 114
>gi|262196797|ref|YP_003268006.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262080144|gb|ACY16113.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 279
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
LI + GP+ GE P S + V + D +SS+H + + G W ++DL S
Sbjct: 189 LIPIEGPQRGELYTLAPKSVVGTEPTCH---VVLSDTYMSSQHAELVAEGGVWILRDLGS 245
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT++N + T +L +ND ++ G
Sbjct: 246 TNGTYVNDQRI---TQRELVDNDFVRFG 270
>gi|226323429|ref|ZP_03798947.1| hypothetical protein COPCOM_01203 [Coprococcus comes ATCC 27758]
gi|225208113|gb|EEG90467.1| type VII secretion protein EssC [Coprococcus comes ATCC 27758]
Length = 1475
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 9 IMVRGPR-SGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
I VR R +GE E P +I IGR + ND+ + D +S HL+I S GK I+D
Sbjct: 36 IEVRFTRDTGEYSESYPIPYECQIHIGR-SKKNDIVLNDSYVSRNHLLITSERGKIRIED 94
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ-MITMDSQDESVAKPKRNPRR 123
L S GT+LN + L L+ D I + D I + + + E+ P+ ++
Sbjct: 95 LGSKYGTYLNGSPLKKAM---LKSGDEIDICDLRIICKENTLYFYNLHET---PELKYQK 148
Query: 124 QANVPGTSS 132
+ N PG ++
Sbjct: 149 EINHPGMAT 157
>gi|375137732|ref|YP_004998381.1| multidrug ABC transporter ATPase [Mycobacterium rhodesiae NBB3]
gi|359818353|gb|AEV71166.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium rhodesiae NBB3]
Length = 887
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
G T F PG+ + +GR +R D+ I IS HL++ G+W D S NG ++N+
Sbjct: 15 GSTRTFAPGNDVVVGRDLRA-DIRIAHPLISRAHLVLRFDQGRWVAIDNGSLNGMYVNNR 73
Query: 77 TLPPNTPFDLRENDTIKLGD 96
+ + DL + I +G+
Sbjct: 74 QV---STVDLHDGQHINIGN 90
>gi|315042101|ref|XP_003170427.1| RING finger protein [Arthroderma gypseum CBS 118893]
gi|311345461|gb|EFR04664.1| RING finger protein [Arthroderma gypseum CBS 118893]
Length = 679
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 321 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 380
Query: 95 G 95
G
Sbjct: 381 G 381
>gi|108757503|ref|YP_629777.1| FHA domain/GGDEF domain-containing protein [Myxococcus xanthus DK
1622]
gi|108461383|gb|ABF86568.1| FHA domain/GGDEF domain protein [Myxococcus xanthus DK 1622]
Length = 354
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ + GP G+ + +++ IGR + N + + D +S +H I GK ++DL S
Sbjct: 87 LVQIHGPELGKKYLIE-DAELTIGR-DQHNHIVVDLDNVSRRHARILGRGGKMLVEDLGS 144
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGTFLN + +P LR D +K+G
Sbjct: 145 TNGTFLNDQEVLQASP--LRSGDLVKVG 170
>gi|433646826|ref|YP_007291828.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium smegmatis JS623]
gi|433296603|gb|AGB22423.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium smegmatis JS623]
Length = 774
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P + I V G F PG + IGR V D+ + G+S H+++ + G+W
Sbjct: 2 MSRPPLHTITVYA--GGWHRTFGPGGDLVIGRDVHA-DIRLPQPGVSRAHVLLRYLDGQW 58
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D S NG F++ + + D+R+ TI +G+
Sbjct: 59 VAVDNASTNGMFVDKQRV---SSVDIRDGQTIHIGE 91
>gi|86157276|ref|YP_464061.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773787|gb|ABC80624.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 150
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 36 GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
GN V I D S +H I G + DLDS NGTFLNS + T LR D I++
Sbjct: 84 GNTVVIGSDQASRRHARIFVSGGAHVLVDLDSTNGTFLNSKQVKEQT---LRHGDVIRV 139
>gi|86156857|ref|YP_463642.1| diguanylate cyclase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773368|gb|ABC80205.1| diguanylate cyclase (GGDEF domain) [Anaeromyxobacter dehalogenans
2CP-C]
Length = 338
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWTIQDLD 66
L+++ GP+ GE P ++ IGR R + D+ I+DDG+S +H I ++DL
Sbjct: 40 LLVLAGPQLGEIYPLAPDRELVIGR--RDDCDLPIRDDGVSRRHAAIRVEGEGAVLRDLG 97
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
S NGT+++ L + + LG T +
Sbjct: 98 SANGTYVDGAR--AEGEVRLADGGRVSLGGATVL 129
>gi|326472642|gb|EGD96651.1| FHA domain-containing protein [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 241 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 300
Query: 95 G 95
G
Sbjct: 301 G 301
>gi|327292628|ref|XP_003231012.1| FHA domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326466818|gb|EGD92271.1| FHA domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 501
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 137 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 196
Query: 95 G 95
G
Sbjct: 197 G 197
>gi|268573376|ref|XP_002641665.1| Hypothetical protein CBG09993 [Caenorhabditis briggsae]
Length = 715
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE------SVSGK-WTIQDLDSCNGTFLNSTTLPP 80
+ IGRI G D+ ++ IS H I++ S +GK W I +L S +G+ +N LPP
Sbjct: 110 VVIGRIKPGCDLVMEHPSISRYHCILQYGDDRMSKTGKGWHIFELGSTHGSRMNKKRLPP 169
Query: 81 NTPFDLRENDTIKLGDCTTISVQMITM-----DSQDESVAKPKRNPRRQANVPGTSSVRA 135
R + GD S +M + DS+ E P R+ + +RA
Sbjct: 170 KQYIRTRVGFIFQFGD----STRMFNLVGPEEDSEPEWDCSPTEMKLRKHKKELEAKLRA 225
Query: 136 TSGRKKAEAE 145
+ ++ AE E
Sbjct: 226 AAAQEMAEDE 235
>gi|334564756|ref|ZP_08517747.1| hypothetical protein CbovD2_09291 [Corynebacterium bovis DSM
20582]
Length = 101
Score = 45.1 bits (105), Expect = 0.056, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P L + GP +G T++ + ++ IGR + ++DD S+ H + + W +
Sbjct: 4 PAPRSLTLTTGPLAGTTLDLEGYREVTIGRSA-ACTLVVEDDFASASHARLSNTGSGWYV 62
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+DLDS NGTFL+ + + P L I++G
Sbjct: 63 EDLDSRNGTFLDGLRI--DQPESLSAGQEIRIG 93
>gi|428202579|ref|YP_007081168.1| family 3 adenylate cyclase [Pleurocapsa sp. PCC 7327]
gi|427980011|gb|AFY77611.1| family 3 adenylate cyclase [Pleurocapsa sp. PCC 7327]
Length = 330
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 1 MEPPGMK-LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SG 58
ME PG ++++ R + + IGR + ND I D+ IS H I++S+ +G
Sbjct: 1 MENPGQNPYLLLQTTRGNRYLPLVGKTYWTIGR-GKDNDFVISDNCISRHHAILQSMGTG 59
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++ + DL S NGTF+N + + P LR++D + G
Sbjct: 60 EFFLIDLGSRNGTFVNGRRV--SIPVTLRDSDRVTFG 94
>gi|242043346|ref|XP_002459544.1| hypothetical protein SORBIDRAFT_02g006370 [Sorghum bicolor]
gi|241922921|gb|EER96065.1| hypothetical protein SORBIDRAFT_02g006370 [Sorghum bicolor]
Length = 584
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
I +GR V +D+ KD +S KH I + + KW + D+ S NGTFLNS ++ P+
Sbjct: 207 ITLGR-VPPSDLVFKDSEVSGKHAQINWNAKTLKWELVDMGSLNGTFLNSQSVHHPDAQS 265
Query: 83 -----PFDLRENDTIKLGDCTTISVQM 104
P +L D I LG + +SVQ+
Sbjct: 266 RRWGEPAELAHGDIITLGTSSKLSVQI 292
>gi|338535248|ref|YP_004668582.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337261344|gb|AEI67504.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 176
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 38 DVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D+ + D +S H L + G +T++D +S NGTF+N L L++ DT+ G
Sbjct: 92 DLLVPDPSVSQHHATLRWNAARGGFTVRDAESMNGTFINGAPLGYRAQVQLQDGDTLAFG 151
Query: 96 DCTTISVQMITMDSQDESVAKPKRNP 121
D + ++ T+ + +A P++ P
Sbjct: 152 DAQFLYLRAETV-YEHLRLASPRKAP 176
>gi|333986034|ref|YP_004515244.1| cyclic nucleotide-binding protein [Methylomonas methanica MC09]
gi|333810075|gb|AEG02745.1| cyclic nucleotide-binding protein [Methylomonas methanica MC09]
Length = 1083
Score = 45.1 bits (105), Expect = 0.057, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
I IGR V D+ I + +S +H + + + DL S NGTF+N + LPPN P L
Sbjct: 40 ICIGRGVDAPDINIPESLLSRQHCRLHLDTEQRLFLTDLGSQNGTFVNGSRLPPNQPQQL 99
Query: 87 RENDTIKLG 95
+ D ++
Sbjct: 100 KPADRVRFA 108
>gi|325290447|ref|YP_004266628.1| FHA domain-containing protein [Syntrophobotulus glycolicus DSM
8271]
gi|324965848|gb|ADY56627.1| FHA domain containing protein [Syntrophobotulus glycolicus DSM
8271]
Length = 260
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
DV IKD+ +S KH + S +W IQDL S NGT++N + + L D I+ G
Sbjct: 197 DVEIKDEEMSRKHFRLYQESSRWFIQDLGSTNGTYVNKLKVD---KYMLHPGDKIRAGQT 253
Query: 98 TTI 100
+
Sbjct: 254 VMV 256
>gi|348683910|gb|EGZ23725.1| hypothetical protein PHYSODRAFT_556396 [Phytophthora sojae]
Length = 655
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 30 IGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
GR D + + +S KH +I G I DL S +GT++N +PP+ P+ L +
Sbjct: 57 FGRDQESCDHVLGNPSVSRKHAAVIHDNEGGIYITDLMSRHGTYVNRKKIPPHDPYLLHD 116
Query: 89 NDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTS 131
D IK G ++ V ++ S + A K++ R+ VP S
Sbjct: 117 GDVIKFGQ--SVRVYILKGASSKGNSAPVKKSWGRKLRVPHVS 157
>gi|332526917|ref|ZP_08403010.1| hypothetical protein RBXJA2T_13484 [Rubrivivax benzoatilyticus JA2]
gi|332111359|gb|EGJ11343.1| hypothetical protein RBXJA2T_13484 [Rubrivivax benzoatilyticus JA2]
Length = 220
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 28/148 (18%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H +++ V I+DL+S NGT++N + L +DT+++G
Sbjct: 31 NDIVIDNLAVSGEHAVLQMVGADVFIEDLNSTNGTYINGKAIKKQL---LAHDDTVEIGK 87
Query: 97 CTTISVQMITMDSQDE---SVAKPKR---------NPRRQANVP------GTSSVR---- 134
++ +T DS D V +P + P R + P G++S++
Sbjct: 88 Y---KIKYLTEDSTDYERTMVMRPAQPSPPPFASAGPTRSGHAPIAAAPAGSASIKVLNG 144
Query: 135 ATSGRKKAEAEPVETLGLEGGQIEDQSR 162
A +GR+ + V T+G G Q+ +R
Sbjct: 145 AAAGREVTLTKVVTTVGKPGVQVASITR 172
>gi|336176292|ref|YP_004581667.1| FHA domain-containing protein [Frankia symbiont of Datisca
glomerata]
gi|334857272|gb|AEH07746.1| FHA domain containing protein [Frankia symbiont of Datisca
glomerata]
Length = 180
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
KL++ +G +G + P + + IGR + + + ++DD S++H + G+W ++DL
Sbjct: 88 KLVVTKGHLAGTILPLGP-TPVTIGR-AQDSTLVLEDDFASARHARLVPHDGQWFVEDLG 145
Query: 67 SCNGTFLNST 76
S NGT+L+ T
Sbjct: 146 STNGTYLDRT 155
>gi|359776080|ref|ZP_09279397.1| hypothetical protein ARGLB_037_00770 [Arthrobacter globiformis NBRC
12137]
gi|359306520|dbj|GAB13226.1| hypothetical protein ARGLB_037_00770 [Arthrobacter globiformis NBRC
12137]
Length = 160
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP G T+ S I +GR + + ++DD S +H + +W I+DL
Sbjct: 68 QLVVTEGPLKGRTVPLA-ASPILLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 125
Query: 67 SCNGTFLNSTTLPPNTPFDL 86
S NGT+L L P DL
Sbjct: 126 STNGTYLADQQLTRALPVDL 145
>gi|302551499|ref|ZP_07303841.1| FHA domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302469117|gb|EFL32210.1| FHA domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 120
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N + P P P L + D + +G
Sbjct: 51 VPPEDPGVSHQHAVLVQQPDGNWAVVDQNSTNGTTVNGSDEPIQPFVPVPLHDGDRVHVG 110
Query: 96 DCTTISVQ 103
TTI+++
Sbjct: 111 AWTTITIR 118
>gi|302769972|ref|XP_002968405.1| hypothetical protein SELMODRAFT_89210 [Selaginella moellendorffii]
gi|300164049|gb|EFJ30659.1| hypothetical protein SELMODRAFT_89210 [Selaginella moellendorffii]
Length = 431
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 6 MKLIMVRGPRSGE----TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE---SVSG 58
+ L ++ GP +G T+ G + IGRI + ND+ + D +S KH +I VS
Sbjct: 15 ISLEVLTGPSAGNRLLRTLPEDGGLALSIGRISQ-NDLVLNDSEVSGKHAVINWNCDVS- 72
Query: 59 KWTIQDLDSCNGTFLNSTTLPP-------NTPFDLRENDTIKLGDCTTISVQM 104
+W + DL S NGT LN ++ + P L D + LG + I V +
Sbjct: 73 RWELVDLGSLNGTLLNHRSISISGPRRRRSAPVGLTSGDVLTLGSTSQILVHL 125
>gi|226470430|emb|CAX70495.1| Smad nuclear-interacting protein 1 [Schistosoma japonicum]
Length = 277
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK----WT 61
+L +G ++ + S IGR + D+ + IS +H +++ +
Sbjct: 165 WRLYAFKGNKTLSVLHIHRQSGFLIGRDRKVADIPMDHPSISKQHAVLQYRLVRDLIRLY 224
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
I DL+S NGT+LN+ + ++L E D IK G T V M + D+S
Sbjct: 225 IIDLESANGTYLNNNRIESRRYYELLEKDVIKFGFSTREYVVMTSETDIDDS 276
>gi|310819572|ref|YP_003951930.1| FHA domain/GGDEF domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392644|gb|ADO70103.1| FHA domain/GGDEF domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 293
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 8 LIMVRGPRSG-----ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
L+ + GP G E +E+ G GN + + D +S +H I G+ +
Sbjct: 26 LVQIHGPELGKKYVIEDVEYTIGRD-------EGNHIVVDLDNVSRRHARILVRQGRMFV 78
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+DL S NGT+LN + P LR D IK+G
Sbjct: 79 EDLGSTNGTYLNDQEVRQAQP--LRSGDLIKVG 109
>gi|154278170|ref|XP_001539905.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413490|gb|EDN08873.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 614
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+ +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 VWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|404214965|ref|YP_006669160.1| ABC-type multidrug transport system, ATPase component [Gordonia sp.
KTR9]
gi|403645764|gb|AFR49004.1| ABC-type multidrug transport system, ATPase component [Gordonia sp.
KTR9]
Length = 845
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I +S +HL IE W + D+ S NG F+N + F + + ++LGD
Sbjct: 25 NDIVINHPMVSRRHLAIEWRGAAWCLVDIGSTNGFFVNGQRM---AEFMVPGSMQVRLGD 81
Query: 97 CTTISVQMITMDS 109
TT V + +DS
Sbjct: 82 VTTGPVVDLVVDS 94
>gi|383650464|ref|ZP_09960870.1| hypothetical protein SchaN1_34186 [Streptomyces chartreusis NRRL
12338]
Length = 214
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 25 GSKIRIGRIVRGN------DVTI--KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNS 75
G++I IGR D+++ +D G+S +H ++++ G W + D +S NGT +N
Sbjct: 123 GNQITIGRRRHSTGDTPDIDLSVPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNG 182
Query: 76 TTLP--PNTPFDLRENDTIKLGDCTTISV 102
+ P P P L++ D + +G TTI++
Sbjct: 183 SEDPIQPFVPVPLQDGDRVHVGAWTTITI 211
>gi|348575892|ref|XP_003473722.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cavia porcellus]
Length = 847
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVT------IKDDGISSKHLII-ESVSGKWTIQDLDSCN 69
E + + G ++ IGR G VT I IS H ++ ++ G+WTI D S N
Sbjct: 27 AEWLPLEDGREVSIGR---GFGVTYQLVSKICPLMISRNHCVLKQNPEGRWTIMDNKSLN 83
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLG 95
G +LN L P + +RE D I+LG
Sbjct: 84 GVWLNRERLEPLKFYLIREGDHIQLG 109
>gi|304311190|ref|YP_003810788.1| hypothetical protein HDN1F_15530 [gamma proteobacterium HdN1]
gi|301796923|emb|CBL45136.1| Hypothetical protein HDN1F_15530 [gamma proteobacterium HdN1]
Length = 560
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + GIS KH I SG++ + DLDS NG +N L L E D+IKLGD
Sbjct: 71 DMVLTGKGISRKHAEIIFQSGRFVVNDLDSLNGIKVNGYKL---ARVILEEGDSIKLGDT 127
Query: 98 TTI 100
T +
Sbjct: 128 TLV 130
>gi|284031240|ref|YP_003381171.1| FHA domain containing protein [Kribbella flavida DSM 17836]
gi|283810533|gb|ADB32372.1| FHA domain containing protein [Kribbella flavida DSM 17836]
Length = 215
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 24 PGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82
PGS +RIGR G + I IS +H + V W ++DL+S NGT LN + + +
Sbjct: 134 PGSPTVRIGRGP-GATLRIAHASISRRHAELRHVGNGWMVRDLNSMNGTHLNGSRI--TS 190
Query: 83 PFDLRENDTIKLGDC 97
P +R D ++ G
Sbjct: 191 PTPVRPGDVLQFGSI 205
>gi|358385926|gb|EHK23522.1| hypothetical protein TRIVIDRAFT_55964 [Trichoderma virens Gv29-8]
Length = 301
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 185 WKLFVFKGSDIIDTIELSARSCWLVGREMAVVDLAAEHPSISKQHAVIQFRYTEKRNEFG 244
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR+ D I G T V M+
Sbjct: 245 DKIGKVKPYLIDLESANGTILNDEKVPDSRYLELRDKDMIMFGHSTREYVIMLA 298
>gi|326483547|gb|EGE07557.1| FHA domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 604
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 253 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 312
Query: 95 G 95
G
Sbjct: 313 G 313
>gi|302774300|ref|XP_002970567.1| hypothetical protein SELMODRAFT_93773 [Selaginella moellendorffii]
gi|300162083|gb|EFJ28697.1| hypothetical protein SELMODRAFT_93773 [Selaginella moellendorffii]
Length = 422
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 6 MKLIMVRGPRSGE----TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE---SVSG 58
+ L ++ GP +G T+ G + IGRI + ND+ + D +S KH +I VS
Sbjct: 6 ISLEVLTGPSAGNRLLRTLPEDGGLALSIGRISQ-NDLVLNDSEVSGKHAVINWNCDVS- 63
Query: 59 KWTIQDLDSCNGTFLNSTTLPP-------NTPFDLRENDTIKLGDCTTISVQM 104
+W + DL S NGT LN ++ + P L D + LG + I V +
Sbjct: 64 RWELVDLGSLNGTLLNHRSISISGPRRRRSAPVGLTSGDVLTLGSTSQILVHL 116
>gi|302560609|ref|ZP_07312951.1| FHA domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302478227|gb|EFL41320.1| FHA domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 215
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G T
Sbjct: 149 EDPGVSHQHAVLVQQPDGTWAVVDQNSTNGTTVNGSDEPIQPFVPVPLQDGDRVHVGAWT 208
Query: 99 TISVQ 103
TI++
Sbjct: 209 TITIH 213
>gi|302520541|ref|ZP_07272883.1| secreted protein [Streptomyces sp. SPB78]
gi|318057492|ref|ZP_07976215.1| hypothetical protein SSA3_06108 [Streptomyces sp. SA3_actG]
gi|318078135|ref|ZP_07985467.1| hypothetical protein SSA3_15795 [Streptomyces sp. SA3_actF]
gi|333025692|ref|ZP_08453756.1| hypothetical protein STTU_3196 [Streptomyces sp. Tu6071]
gi|302429436|gb|EFL01252.1| secreted protein [Streptomyces sp. SPB78]
gi|332745544|gb|EGJ75985.1| hypothetical protein STTU_3196 [Streptomyces sp. Tu6071]
Length = 173
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KLI+ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 80 KLIISEGSLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 137
Query: 66 DSCNGTFL--NSTTLPPNTPF 84
S NGT+L N T P P
Sbjct: 138 GSTNGTYLDRNRLTTPAPVPL 158
>gi|351723269|ref|NP_001237017.1| kinase-associated protein phosphatase 2 [Glycine max]
gi|169409936|gb|ACA57834.1| kinase-associated protein phosphatase 2 [Glycine max]
gi|169409942|gb|ACA57837.1| kinase-associated protein phosphatase 2 [Glycine max]
Length = 578
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRI----GRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G + S R+ GR V +D+ IKD +S KH +I+ K
Sbjct: 172 LTLEVISGPSQGLRYSVQSTSPSRLPLTLGR-VSPSDLLIKDSEVSGKHAMIKWNLDKMK 230
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGT LNST + P+T P +L D I LG + + V +
Sbjct: 231 WELVDMGSLNGTLLNSTPINHPDTGSRNWGDPMNLTNGDIITLGTTSKVMVHI 283
>gi|21221125|ref|NP_626904.1| hypothetical protein SCO2669 [Streptomyces coelicolor A3(2)]
gi|6855393|emb|CAB71207.1| hypothetical protein SC6D10.12 [Streptomyces coelicolor A3(2)]
Length = 604
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L++ D + +G
Sbjct: 535 VPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNGGEEPIQPFVPVPLQDGDRVHVG 594
Query: 96 DCTTISV 102
TTI+V
Sbjct: 595 AWTTITV 601
>gi|169614197|ref|XP_001800515.1| hypothetical protein SNOG_10236 [Phaeosphaeria nodorum SN15]
gi|160707298|gb|EAT82571.2| hypothetical protein SNOG_10236 [Phaeosphaeria nodorum SN15]
Length = 406
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 17/97 (17%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P ++ I + PR+G +++F I++G K +S KH + G W I
Sbjct: 49 PSIRFIPHQDPRAGRPSLQFP---TIQLG---------FKSKVVSRKHCELWCKDGSWYI 96
Query: 63 QDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 97 KDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 133
>gi|405375772|ref|ZP_11029794.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397085937|gb|EJJ17095.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 743
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G+T K K+ +GR + + + DD +S +H +E ++DL S NGT
Sbjct: 181 GPWAGQTYPLK--GKVIVGRQPPAS-IQLDDDSVSRRHAELEVTRDGVMVKDLGSANGTL 237
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
LN L TP L D ++ G ++ M ++++ A P R
Sbjct: 238 LNGEPL-DQTPVPLEPGDLLQFG--------VVEMSFEEDASAAPAR 275
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
M ++VR P E E+ ++++GR +G D+ + + G+S H + G I D+
Sbjct: 1 MATLVVRLPDGTEN-EYAITGELKLGR-QQGCDILLTEGGVSRTHARVFEEGGTVFIDDV 58
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKP 117
S NGTF++ + P L + LGD T S AKP
Sbjct: 59 GSANGTFVDGKRI--MEPTALTPQSEVLLGDYTLTLKAAAVRGSGARRAAKP 108
>gi|145527460|ref|XP_001449530.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417118|emb|CAK82133.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 30 IGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+GR + IK++ IS +H LI+ S TIQDL S NGT +N + N LR
Sbjct: 23 LGRSKAQASIVIKNESISRQHAKLIVGKSS--ITIQDLGSVNGTEINDRAIKQNQLVLLR 80
Query: 88 ENDTIKLGDC-TTISVQMITMDS 109
E IKLG+ + +Q T+DS
Sbjct: 81 EGMRIKLGEYEQQLEIQFETIDS 103
>gi|342880812|gb|EGU81830.1| hypothetical protein FOXB_07625 [Fusarium oxysporum Fo5176]
Length = 294
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TIE S IGR + D+ + IS +H +I+
Sbjct: 178 WKLFVFKGQDIVDTIELSTRSCWLIGREMTVVDLPAEHPSISKQHAVIQFRYVEKRNEFG 237
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN + +P + +LR+ D I+ G T V M+
Sbjct: 238 DKIGKVKPYLIDLESANGTMLNDSKIPDSRYLELRDKDMIQFGHSTREYVIMLA 291
>gi|449283237|gb|EMC89918.1| E3 ubiquitin-protein ligase RNF8, partial [Columba livia]
Length = 225
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 46 ISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS KH + + + G+WT++D S NG +LN L P+ + + E D I+LG
Sbjct: 22 ISRKHCVFQQNAEGQWTVKDNKSLNGVWLNKQRLDPSKAYPITEGDRIQLG 72
>gi|384247123|gb|EIE20611.1| parvulin-type peptidyl-prolyl cis-trans isomerase [Coccomyxa
subellipsoidea C-169]
Length = 245
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 15 RSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNG 70
+SGE IE P + GRI +D+T+ D S H ++ G+ + DL S G
Sbjct: 23 QSGELIESFPIDTKAFYLFGRIPETSDITLSDSSCSRSHAALVHHEDGRLFLIDLQSSQG 82
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLGDCT 98
T L+ +PPN P + + G+ T
Sbjct: 83 THLDGRRIPPNKPTQISNASVLTFGNLT 110
>gi|298245520|ref|ZP_06969326.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297553001|gb|EFH86866.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 456
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 16 SGETIEFKPGSK--IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG+ I P K I IGR + + KD S +H ++ +G++ +QD S NGTF+
Sbjct: 106 SGQVITEYPLEKKEIVIGRAPNSDILLQKDKLTSRRHAVVHFENGQYVLQDEHSANGTFV 165
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N L N L++ D I +G+ I
Sbjct: 166 NGQQLDDNGTRLLQDGDHIGIGEHELI 192
>gi|332796608|ref|YP_004458108.1| FHA domain-containing protein [Acidianus hospitalis W1]
gi|332694343|gb|AEE93810.1| FHA domain containing protein [Acidianus hospitalis W1]
Length = 233
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 6 MKLIMVRGPRSGET-----IEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
LI + P S +EF I IGR N + I D IS +H II GK
Sbjct: 128 YYLIFIATPVSALNKTKLPLEFDVFESISIGRSPE-NVIVIPDPEISRRHAIISLEGGKL 186
Query: 61 TIQDLDSCNGTFLNSTTL--PPNTPFDLRENDTIKLGDCTTISV 102
I+DL+S NGT+L L P +L IKLG T + +
Sbjct: 187 YIEDLNSTNGTYLYDGKLFQPVKGKQELAPGSIIKLGSNTMLKI 230
>gi|261203939|ref|XP_002629183.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces dermatitidis
SLH14081]
gi|239586968|gb|EEQ69611.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces dermatitidis
SLH14081]
Length = 756
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 IWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|148223942|ref|NP_001080384.1| E3 ubiquitin-protein ligase RNF8-A [Xenopus laevis]
gi|82209734|sp|Q7ZX20.1|RNF8A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF8-A; AltName:
Full=RING finger protein 8-A
gi|28279440|gb|AAH46256.1| Rnf8-prov protein [Xenopus laevis]
Length = 540
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGR---IVRGNDVTIKDDGISSKHLII-ESVS 57
E PGM + R R+ E + G ++ +GR + T+ IS H + ++
Sbjct: 4 EGPGMCWCLRRCGRNTEDLLLPDGEEVTLGRGLGVTYQLKPTLCPLMISRTHCLFKQNTG 63
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WT+ D S NG + N L P+ + L E I+LG
Sbjct: 64 GEWTVTDNKSLNGVWRNKERLEPHKAYTLSEGALIQLG 101
>gi|423345438|ref|ZP_17323127.1| hypothetical protein HMPREF1060_00799 [Parabacteroides merdae
CL03T12C32]
gi|409223224|gb|EKN16161.1| hypothetical protein HMPREF1060_00799 [Parabacteroides merdae
CL03T12C32]
Length = 217
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
IRIG+ ND + D +S H ++ G W ++DL S NGTF+N + +
Sbjct: 3 IRIGK-ASDNDFVVNDPHVSRYHAKLVREEGGYWLLEDLGSTNGTFVNGAQIVKK---HV 58
Query: 87 RENDTIKLGDCTTISVQMITMDSQDES----VAKPKRNPRRQANVPGTSS 132
+DTIKLGD +++ + D S V K + QA V SS
Sbjct: 59 TPSDTIKLGDNYVLNISEALKSNNDYSEEFAVLKQIYDDYIQAKVKIQSS 108
>gi|239608800|gb|EEQ85787.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces dermatitidis
ER-3]
Length = 756
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 IWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|444912379|ref|ZP_21232543.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
gi|444716961|gb|ELW57798.1| Adenylate cyclase [Cystobacter fuscus DSM 2262]
Length = 561
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 3 PPGMKLIMVRGPR------SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV 56
PP K RGP G T EF G +GR N + + D +S +H IE V
Sbjct: 6 PPSSKTAGPRGPHLKGRFPDGTTGEFSLGQLTTLGRH-PSNTLRLVDREVSKEHATIERV 64
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++ ++DL S NGTF+N + + LR+ D I +G
Sbjct: 65 GREYVLRDLGSSNGTFVNGKRV---SELKLRDGDEISVG 100
>gi|327355417|gb|EGE84274.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces dermatitidis ATCC
18188]
Length = 756
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
I +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 IWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|224536927|ref|ZP_03677466.1| hypothetical protein BACCELL_01803 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521454|gb|EEF90559.1| hypothetical protein BACCELL_01803 [Bacteroides cellulosilyticus
DSM 14838]
Length = 81
Score = 44.7 bits (104), Expect = 0.070, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 54 ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
+S SG+W I DLDS NGTF+N L PN P D +++ +
Sbjct: 33 KSASGQWEIVDLDSTNGTFVNGNRLSPNVPAVFSIGDIVRIAN 75
>gi|55925478|ref|NP_991329.1| E3 ubiquitin-protein ligase RNF8 isoform 2 [Danio rerio]
gi|82210116|sp|Q803C1.1|RNF8_DANRE RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|27882568|gb|AAH44545.1| Zgc:55936 [Danio rerio]
Length = 485
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 46 ISSKHLIIESVSGK-WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H + + G+ WT+ D S NG ++N +PP+TP L ++D+++LG
Sbjct: 64 ISRIHCVFKLNEGRQWTVTDNKSLNGVWVNGKRIPPSTPCILHQSDSVRLG 114
>gi|29348183|ref|NP_811686.1| adenylate cyclase [Bacteroides thetaiotaomicron VPI-5482]
gi|29340086|gb|AAO77880.1| putative adenylate cyclase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 493
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 37 NDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NDV + D G+SS+H +I S SG I+DL+S NGTF+NS + L D +KLG
Sbjct: 12 NDVVVSDPGVSSQHAVITVSSSGIVCIKDLNSKNGTFVNSMRI--QNQVQLSNGDKVKLG 69
Query: 96 DCT 98
+ +
Sbjct: 70 NTS 72
>gi|291526753|emb|CBK92339.1| FOG: FHA domain [Eubacterium rectale M104/1]
Length = 397
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D I D IS H +I + ++ ++DL+S NGTF+N+ L L+ ND I+ D
Sbjct: 333 DAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFAD 391
>gi|260887297|ref|ZP_05898560.1| FHA domain containing protein [Selenomonas sputigena ATCC 35185]
gi|330838949|ref|YP_004413529.1| FHA domain containing protein [Selenomonas sputigena ATCC 35185]
gi|260862933|gb|EEX77433.1| FHA domain containing protein [Selenomonas sputigena ATCC 35185]
gi|329746713|gb|AEC00070.1| FHA domain containing protein [Selenomonas sputigena ATCC 35185]
Length = 150
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I D +S +H ++ V+ ++ I+D+ S N T+LN L L+ D I++G
Sbjct: 86 NDIRIPDSFVSHRHAVVRLVNNQYVIEDMGSMNHTYLNDAILQGKAY--LKPGDLIRIGF 143
Query: 97 CT 98
T
Sbjct: 144 VT 145
>gi|442318647|ref|YP_007358668.1| FHA domain/GGDEF domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486289|gb|AGC42984.1| FHA domain/GGDEF domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 306
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ + GP G+ S++ IGR + N + + D +S +H + GK ++DL S
Sbjct: 39 LVQIHGPELGKKY-LIDDSELTIGR-DQHNHIVVDLDNVSRRHARVLGRGGKMLVEDLGS 96
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+LN + P LR D IK+G
Sbjct: 97 TNGTYLNDQEVLQAQP--LRSGDLIKVG 122
>gi|374992244|ref|YP_004967739.1| putative ABC transporter ATP-binding protein [Streptomyces
bingchenggensis BCW-1]
gi|297162896|gb|ADI12608.1| putative ABC transporter ATP-binding protein [Streptomyces
bingchenggensis BCW-1]
Length = 867
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS 75
SG T IGR + D++ D +S +HL+I G W I+DL S NGTF
Sbjct: 9 SGRTWTLDASRSYTIGRDQQQADISCIDRRVSRRHLVIRCDGGTWVIEDLGSANGTFAEG 68
Query: 76 TTLPPNTPFDLRENDTIKLGDCTT 99
+ ++ ++LGD +T
Sbjct: 69 RRI---QRIEIGHGSIVRLGDVST 89
>gi|225560770|gb|EEH09051.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 760
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+ +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 VWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|254411521|ref|ZP_05025298.1| DNA/RNA non-specific endonuclease, putative [Coleofasciculus
chthonoplastes PCC 7420]
gi|196182022|gb|EDX77009.1| DNA/RNA non-specific endonuclease, putative [Coleofasciculus
chthonoplastes PCC 7420]
Length = 455
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 47 SSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
SS H I+ + I+DL S NGTFLN + L P TP+ L D I LG
Sbjct: 54 SSSHTEIQIQGNAYFIEDLGSMNGTFLNHSPLTPFTPYQLHLGDRIDLG 102
>gi|154495345|ref|ZP_02034350.1| hypothetical protein PARMER_04402 [Parabacteroides merdae ATCC
43184]
gi|423722294|ref|ZP_17696470.1| hypothetical protein HMPREF1078_00533 [Parabacteroides merdae
CL09T00C40]
gi|154085269|gb|EDN84314.1| FHA domain protein [Parabacteroides merdae ATCC 43184]
gi|409242435|gb|EKN35197.1| hypothetical protein HMPREF1078_00533 [Parabacteroides merdae
CL09T00C40]
Length = 217
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
IRIG+ ND + D +S H +I G W ++DL S NGTF+N + +
Sbjct: 3 IRIGK-ASDNDFVVNDPHVSRYHAKLIREEGGCWLLEDLGSTNGTFVNGAQIVKK---HV 58
Query: 87 RENDTIKLGDCTTISVQMITMDSQDES 113
+DTIKLGD +++ + D S
Sbjct: 59 TPSDTIKLGDNYVLNISEALKSNNDYS 85
>gi|255080398|ref|XP_002503779.1| predicted protein [Micromonas sp. RCC299]
gi|226519046|gb|ACO65037.1| predicted protein [Micromonas sp. RCC299]
Length = 689
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTI---KDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
SG +E +PG I++G + D + G+ S H ++ V G I+DL S GTF
Sbjct: 307 SGPAVELEPGVPIKLGTGRKKGDADVILTGVQGVDSSHAVLLRVGGAVYIEDLGSSMGTF 366
Query: 73 LNSTTLPPNTPFDLRENDTIKLGD 96
+ + P ++L ++LGD
Sbjct: 367 VGGRQVRPGLQYELTPGADVQLGD 390
>gi|440793916|gb|ELR15087.1| FHA domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 387
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 9 IMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSG--KWTIQD 64
+ G G ++ S R GR +D+ + S +H L V+G + + D
Sbjct: 281 VFKSGQALGAPLDVAKRSCYRFGREAELSDIVAAHESCSKQHAALQFREVNGAIRPYLID 340
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
+ S NGTF+N + PN +L+E DT+ LG C+T
Sbjct: 341 VGSANGTFVNKQRIKPNEYVELKEGDTVVLG-CST 374
>gi|386866288|ref|YP_006279282.1| hypothetical protein BANAN_00460 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385700371|gb|AFI62319.1| hypothetical protein BANAN_00460 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 181
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ S I +GR N V + D+ +SS H + + +G W I+DL
Sbjct: 89 LVIIDGPLAGTSVPLN-SSVITLGR-AASNTVVLDDEFVSSHHARVYPDPNTGVWVIEDL 146
Query: 66 DSCNGTFLN 74
S NGT +N
Sbjct: 147 HSTNGTVVN 155
>gi|87311568|ref|ZP_01093686.1| ornithine decarboxylase inhibitor-putative sigma54 transciptional
regulator [Blastopirellula marina DSM 3645]
gi|87285690|gb|EAQ77606.1| ornithine decarboxylase inhibitor-putative sigma54 transciptional
regulator [Blastopirellula marina DSM 3645]
Length = 679
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
LI+ G + PG + IGR N + IKDD S H I G+W ++DLDS
Sbjct: 5 LIIREGSNWTDVFRLVPGHTVTIGR-APTNQIVIKDDRCSRYHAEIFLSEGEWILRDLDS 63
Query: 68 CNGT 71
NGT
Sbjct: 64 RNGT 67
>gi|375289777|ref|YP_005124317.1| putative secreted protein [Corynebacterium diphtheriae 241]
gi|375292023|ref|YP_005126562.1| putative secreted protein [Corynebacterium diphtheriae INCA 402]
gi|376241746|ref|YP_005132598.1| putative secreted protein [Corynebacterium diphtheriae CDCE 8392]
gi|376244609|ref|YP_005134848.1| putative secreted protein [Corynebacterium diphtheriae HC01]
gi|376253172|ref|YP_005141631.1| putative secreted protein [Corynebacterium diphtheriae PW8]
gi|371579448|gb|AEX43115.1| putative secreted protein [Corynebacterium diphtheriae 241]
gi|371581694|gb|AEX45360.1| putative secreted protein [Corynebacterium diphtheriae INCA 402]
gi|372104988|gb|AEX71050.1| putative secreted protein [Corynebacterium diphtheriae CDCE 8392]
gi|372107239|gb|AEX73300.1| putative secreted protein [Corynebacterium diphtheriae HC01]
gi|372116256|gb|AEX68726.1| putative secreted protein [Corynebacterium diphtheriae PW8]
Length = 162
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP +G +++ ++I +GR + D + DD S++H + +W +DLD
Sbjct: 69 QIVVVEGPLTGSSMQLDSLTEITLGR-SKDCDFVVGDDYASARHARLIKRGSEWFAEDLD 127
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
S NGT++ + + P + IK+G T
Sbjct: 128 SRNGTYVGGYRI--DQPEKVSAGSDIKIGRTTV 158
>gi|162458781|ref|NP_001105398.1| kinase associated protein phosphatase [Zea mays]
gi|2735008|gb|AAB93832.1| kinase associated protein phosphatase [Zea mays]
gi|323388711|gb|ADX60160.1| FHA transcription factor [Zea mays]
gi|414884002|tpg|DAA60016.1| TPA: kinase associated protein phosphatase [Zea mays]
Length = 583
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE--SVSGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
I +GR V +D+ +KD +S KH I + KW + D+ S NGTFLNS + P+
Sbjct: 202 ITLGR-VPPSDLVLKDSEVSGKHAQINWNGKTLKWELVDMGSLNGTFLNSQAVHHPSAGS 260
Query: 83 -----PFDLRENDTIKLGDCTTISVQMI 105
P +L D I LG + +SVQ++
Sbjct: 261 RHWGEPAELAHGDIITLGTSSKLSVQIL 288
>gi|357399382|ref|YP_004911307.1| hypothetical protein SCAT_1780 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386355422|ref|YP_006053668.1| hypothetical protein SCATT_17750 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337765791|emb|CCB74500.1| conserved protein of unknown function [Streptomyces cattleya NRRL
8057 = DSM 46488]
gi|365805930|gb|AEW94146.1| hypothetical protein SCATT_17750 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 271
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H L++ G W++ D DS NGT +N P P P +L + D + +G T
Sbjct: 205 EDPGVSHRHALLVRRPDGGWSVVDQDSTNGTTVNLGAEPITPFQPVELADGDQVHVGAWT 264
Query: 99 TISVQ 103
TI+++
Sbjct: 265 TITLR 269
>gi|383453549|ref|YP_005367538.1| FHA domain/GGDEF domain-containing protein [Corallococcus
coralloides DSM 2259]
gi|380734976|gb|AFE10978.1| FHA domain/GGDEF domain-containing protein [Corallococcus
coralloides DSM 2259]
Length = 293
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ + GP G+ + ++ IGR + N + + D +S +H I + GK ++DL S
Sbjct: 26 LVQIHGPELGKKYVLEE-TEFTIGR-DQHNHIVVDLDNVSRRHARIWTRQGKTFVEDLQS 83
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+LN + P LR D +K+G
Sbjct: 84 TNGTYLNDREVLQAQP--LRSGDLVKVG 109
>gi|325000095|ref|ZP_08121207.1| FHA domain-containing protein [Pseudonocardia sp. P1]
Length = 156
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 7 KLIMVRGPRSGE--TIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTI 62
+L++ +GP +G T++ +P I IGR +D T+K DD S++H I +W +
Sbjct: 64 QLLVTQGPLTGSRITLDSRP---ILIGR---ADDSTLKLDDDYASTRHARISQQGDEWYV 117
Query: 63 QDLDSCNGTFL--NSTTLPPNTPF 84
+DL S NGT+L N T P P
Sbjct: 118 EDLGSTNGTYLERNKVTGPTRVPL 141
>gi|224104933|ref|XP_002313623.1| predicted protein [Populus trichocarpa]
gi|222850031|gb|EEE87578.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
S++ +GR+ D+ I +S+ H I++ G + DLDS NGTF++ LPP
Sbjct: 109 SEVTVGRLPDKADMVIPVATVSALHARIQNKGGNLVVTDLDSTNGTFIDKKRLPPGASVS 168
Query: 86 LRENDTIKLGDCTTISVQMITMDSQDES 113
+ I GD T +++ +++ ++ ES
Sbjct: 169 VSPGSRIIFGD-THLAMFLVSKLAKVES 195
>gi|453087646|gb|EMF15687.1| hypothetical protein SEPMUDRAFT_131319 [Mycosphaerella populorum
SO2202]
Length = 1768
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 23 KPGSKIRIGRIVRGND-----VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
+P +K+R+GR + V K +S +H G+W ++D+ S +GTFLN
Sbjct: 1376 QPDAKVRVGRFSERDSQTSDVVGFKSKVVSRRHCEFWCTDGQWYVKDVKSSSGTFLNHVR 1435
Query: 78 LPP----NTPFDLRENDTIKLG 95
L + P+ + + D ++LG
Sbjct: 1436 LSSPGVESRPYPVNDGDVVQLG 1457
>gi|291526242|emb|CBK91829.1| FOG: FHA domain [Eubacterium rectale DSM 17629]
Length = 397
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D I D IS H +I + ++ ++DL+S NGTF+N+ L L+ ND I+ D
Sbjct: 333 DAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFAD 391
>gi|365987209|ref|XP_003670436.1| hypothetical protein NDAI_0E03760 [Naumovozyma dairenensis CBS 421]
gi|343769206|emb|CCD25193.1| hypothetical protein NDAI_0E03760 [Naumovozyma dairenensis CBS 421]
Length = 583
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSG------KWTIQDLDSCNGTFLNSTTLPPN 81
++IGR + D + D +SS H II ++ I+DL S NGTF+NS L N
Sbjct: 84 LKIGRNTKEVDFLLNDPSVSSIHCIIWAILFDEKSIPMCYIKDL-SLNGTFVNSKRLERN 142
Query: 82 TPFDLRENDTIKLGD-CTTISVQMITM 107
+ L +ND I+L T+S MI +
Sbjct: 143 VAYLLNDNDIIELSSTFNTLSTSMINL 169
>gi|302543939|ref|ZP_07296281.1| putative FHA domain protein [Streptomyces hygroscopicus ATCC 53653]
gi|302461557|gb|EFL24650.1| putative FHA domain protein [Streptomyces himastatinicus ATCC
53653]
Length = 174
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KL++ G +G T+ + G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 81 KLVVSEGTLTGTTVALQ-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 138
Query: 66 DSCNGTFLNSTTLPPNTPFDL 86
S NGT+L L TP L
Sbjct: 139 GSTNGTYLERNRLTTPTPVPL 159
>gi|90020762|ref|YP_526589.1| ATPase [Saccharophagus degradans 2-40]
gi|89950362|gb|ABD80377.1| Forkhead-associated [Saccharophagus degradans 2-40]
Length = 117
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 8 LIMVRGPRSGETIE-FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+ +R +GET+ ++ G I+IGR +D+ I+D +S+ H + + +G W ++D+
Sbjct: 1 MAYLRHLFNGETVTLYELGEAIKIGRHA-DSDIRIEDLTVSATHCRLAAQAGGWWLEDMQ 59
Query: 67 SCNGTFLNS-----TTLPPNTPFDL 86
S NGT +N L PN F +
Sbjct: 60 STNGTLMNGERVTRVQLAPNDVFSV 84
>gi|384109276|ref|ZP_10010156.1| hypothetical protein MSI_17210 [Treponema sp. JC4]
gi|383869153|gb|EID84772.1| hypothetical protein MSI_17210 [Treponema sp. JC4]
Length = 114
Score = 44.3 bits (103), Expect = 0.080, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+KI IGR NDV + + S H +I+ + + I+D+ S NGTF+N +P +
Sbjct: 39 AKITIGRDT-DNDVVVDNKLASRHHAMIQKIKNAYFIKDMGSTNGTFINGVRIPNDKYVK 97
Query: 86 LRENDTIKLGDCTTI 100
+ D I +G+ + +
Sbjct: 98 MNPGDKITIGNMSLV 112
>gi|353234711|emb|CCA66733.1| hypothetical protein PIIN_00414 [Piriformospora indica DSM 11827]
Length = 750
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I G +++IGR V + +G +S +H + S
Sbjct: 9 PALNLFPLNDSFIPKHIVLAGGQRVKIGRQTNAKTVPGEKNGYFDSKVLSRQHAEVWEES 68
Query: 58 GKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
GK I+D+ S NGTF+N T L + PF+L +D ++ G
Sbjct: 69 GKIYIKDVKSSNGTFINGTRLSHEGVESPPFELNTDDVVEFG 110
>gi|302497307|ref|XP_003010654.1| FHA domain protein [Arthroderma benhamiae CBS 112371]
gi|291174197|gb|EFE30014.1| FHA domain protein [Arthroderma benhamiae CBS 112371]
Length = 713
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 324 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 383
Query: 95 G 95
G
Sbjct: 384 G 384
>gi|238922476|ref|YP_002935989.1| hypothetical protein EUBREC_0050 [Eubacterium rectale ATCC 33656]
gi|238874148|gb|ACR73855.1| Hypothetical protein EUBREC_0050 [Eubacterium rectale ATCC 33656]
Length = 397
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D I D IS H +I + ++ ++DL+S NGTF+N+ L L+ ND I+ D
Sbjct: 333 DAVIGKDTISHFHAVINRENQEFYLEDLNSTNGTFVNNEVLAYKQKKQLKSNDIIRFAD 391
>gi|19114645|ref|NP_593733.1| mitotic spindle checkpoint protein Dma1 [Schizosaccharomyces pombe
972h-]
gi|1723482|sp|Q10322.1|DMA1_SCHPO RecName: Full=Probable E3 ubiquitin-protein ligase dma1
gi|1213259|emb|CAA93693.1| mitotic spindle checkpoint protein Dma1 [Schizosaccharomyces pombe]
gi|1495228|emb|CAA57466.1| dma1 [Schizosaccharomyces pombe]
Length = 267
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 28 IRIGRI---VRGNDVT---IKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP- 80
I IGR G DV+ + +S +H I + W IQD+ S +GTFLN L P
Sbjct: 60 IYIGRYTERYNGGDVSAIVFRSKVVSRRHAQIFYENNTWYIQDMGSSSGTFLNHVRLSPP 119
Query: 81 ---NTPFDLRENDTIKLG 95
+ P+ + ND ++LG
Sbjct: 120 SKTSKPYPISNNDILQLG 137
>gi|452982835|gb|EME82593.1| hypothetical protein MYCFIDRAFT_70778 [Pseudocercospora fijiensis
CIRAD86]
Length = 660
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 18/97 (18%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG---------ISSKHLIIESVSGKW-------TI 62
TIE PG+ IGR + + ++ +S H E + W TI
Sbjct: 46 TIELLPGTACIIGRASKSDFKNMRPTAHNALFDCPVVSRTH--AELRASPWQPPGRQVTI 103
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
D S +GT +N T L PN PF L+ D IKLGD +
Sbjct: 104 TDKSSLHGTTVNDTKLQPNVPFTLKTGDVIKLGDTVS 140
>gi|426402466|ref|YP_007021437.1| hypothetical protein Bdt_0462 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859134|gb|AFY00170.1| hypothetical protein Bdt_0462 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 551
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP++G +E K G + IGR + D+ + G+S +H I K + DL S NGT+
Sbjct: 3 GPQAGSVLELKMGRNL-IGRAPQ-CDIKLISSGVSKEHTEISVFKDKIVVTDLRSSNGTY 60
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTIS-VQMITMDSQDESVAKPKRNPRRQANVP 128
LN + ++ ++LGD I V + +Q+ +P+ P QA +P
Sbjct: 61 LNGVRV---------QSGVMRLGDKLGIHDVIADVIPAQESRAQRPQGQPSAQAPMP 108
>gi|290960312|ref|YP_003491494.1| hypothetical protein SCAB_59361 [Streptomyces scabiei 87.22]
gi|260649838|emb|CBG72954.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 134
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N + P P P L++ D + +G
Sbjct: 65 VPPEDPGVSHQHAVLVQQPDGGWAVVDQNSTNGTTVNGSEEPIQPFVPIPLQDGDRVHVG 124
Query: 96 DCTTISVQ 103
TTI+++
Sbjct: 125 AWTTITIR 132
>gi|163814837|ref|ZP_02206225.1| hypothetical protein COPEUT_00987 [Coprococcus eutactus ATCC 27759]
gi|158449776|gb|EDP26771.1| FHA domain protein [Coprococcus eutactus ATCC 27759]
Length = 527
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 13 GPRSGETIEFK-PGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNG 70
G +SGE +E G + +GR G+ DV I D IS +H +I +G+ ++DL S NG
Sbjct: 434 GRQSGEKLEIHMAGGEQTVGR--DGSADVVINDRSISRRHAVIGEKNGRIYVKDLSSTNG 491
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLGDC-TTISVQMI 105
T++N + + + L D +++G T+ + +I
Sbjct: 492 TYVNEICMCKDRYWPLSGGDVLRIGGVEYTVQILLI 527
>gi|405375861|ref|ZP_11029878.1| Adenylate cyclase [Chondromyces apiculatus DSM 436]
gi|397085815|gb|EJJ16988.1| Adenylate cyclase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 554
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 11 VRGPR------SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
+RGPR G EF G +GR N + + D +S +H +IE V ++ ++D
Sbjct: 15 IRGPRLTGRFADGTLGEFPLGPATSLGRH-PSNTLRLVDREVSKEHAVIERVGKEFVLKD 73
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
L S NGTF+N + LR+ D I LG I
Sbjct: 74 LGSSNGTFVNGRRV---KELKLRDGDEISLGASRLI 106
>gi|373855694|ref|ZP_09598440.1| Forkhead-associated protein [Bacillus sp. 1NLA3E]
gi|372454763|gb|EHP28228.1| Forkhead-associated protein [Bacillus sp. 1NLA3E]
Length = 434
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+IGR + +D T K+ + H + +V+G++ +D S NG+F+N PN ++
Sbjct: 358 FKIGRDPQQSDYTSKNKVVGRVHALFITVNGEYYFEDNHSTNGSFVNGVKAFPNDRVKIK 417
Query: 88 ENDTIKLGD 96
+D IKL +
Sbjct: 418 HDDVIKLAN 426
>gi|333982722|ref|YP_004511932.1| forkhead-associated protein [Methylomonas methanica MC09]
gi|333806763|gb|AEF99432.1| Forkhead-associated protein [Methylomonas methanica MC09]
Length = 468
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGN-DVTIKDDG-ISSKHLIIESVSGKWTI 62
+ L +V G + G + + +GR GN D+ + DD IS++H +++ +GK +
Sbjct: 372 AVTLTVVAGVQKGRVYQLNVAERATLGR--AGNCDLNLDDDVEISNQHTLLQFNNGKLSA 429
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+DL+S NGT +N +P + + LR D + LG
Sbjct: 430 RDLNSTNGTLVNG--VPIHNDYPLRAGDLLLLG 460
>gi|383457379|ref|YP_005371368.1| Pkn9 associate protein 1 [Corallococcus coralloides DSM 2259]
gi|380733148|gb|AFE09150.1| Pkn9 associate protein 1 [Corallococcus coralloides DSM 2259]
Length = 496
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 4 PGMKLIMV---RGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
PG+ V RGP +G+ + + GS I +GR +D+ ++ IS +H + +
Sbjct: 87 PGLTPAFVYVERGPGAGQLVPLRQGS-ITLGRSST-SDLRLQHASISRRHAQLTRRGNVF 144
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
T++DL S NGTF+N + +L+ D + LG+ T
Sbjct: 145 TVRDLGSQNGTFVNRLRI--KGEVELQPGDELSLGNAT 180
>gi|238481313|ref|NP_001154720.1| protein phosphatase 2C 70 [Arabidopsis thaliana]
gi|332005297|gb|AED92680.1| protein phosphatase 2C 70 [Arabidopsis thaliana]
Length = 591
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPP----- 80
+++GR V +D+ +KD +S KH + S KW + D+ S NGT +NS ++
Sbjct: 208 VKLGR-VSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGS 266
Query: 81 ---NTPFDLRENDTIKLGDCTTISVQM 104
P +L +D I LG T + V++
Sbjct: 267 RKWGNPVELASDDIITLGTTTKVYVRI 293
>gi|168704869|ref|ZP_02737146.1| FHA domain protein [Gemmata obscuriglobus UQM 2246]
Length = 294
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + D +S +H +IE + + D S NGTF+N + P+ LR+ D +++G+C
Sbjct: 54 DIRLTDHSVSRRHAVIEPAGEGYCVSDQRSTNGTFVNDRVIEPSRL--LRDGDYLRVGNC 111
>gi|419859685|ref|ZP_14382336.1| putative secreted protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983865|gb|EIK57316.1| putative secreted protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 155
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP +G +++ ++I +GR + D + DD S++H + +W +DLD
Sbjct: 62 QIVVVEGPLTGSSMQLDSLTEITLGR-SKDCDFVVGDDYASARHARLIKRGSEWFAEDLD 120
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
S NGT++ + + P + IK+G T
Sbjct: 121 SRNGTYVGGYRI--DQPEKVSAGSDIKIGRTTV 151
>gi|240280687|gb|EER44191.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces capsulatus H143]
Length = 760
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+ +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 VWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|183602214|ref|ZP_02963581.1| hypothetical protein BIFLAC_00089 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219682576|ref|YP_002468959.1| hypothetical protein BLA_0080 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190153|ref|YP_002967547.1| hypothetical protein Balac_0089 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195559|ref|YP_002969114.1| hypothetical protein Balat_0089 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384190366|ref|YP_005576114.1| exported protein with FHA domain [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384191502|ref|YP_005577249.1| exported protein with FHA domain [Bifidobacterium animalis subsp.
lactis CNCM I-2494]
gi|384193152|ref|YP_005578898.1| FHA domain protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|384194709|ref|YP_005580454.1| hypothetical protein BalV_0087 [Bifidobacterium animalis subsp.
lactis V9]
gi|387820016|ref|YP_006300059.1| FHA-domain-containing protein [Bifidobacterium animalis subsp.
lactis B420]
gi|387821670|ref|YP_006301619.1| FHA-domain-containing protein [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423678674|ref|ZP_17653550.1| hypothetical protein FEM_08737 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218428|gb|EDT89072.1| hypothetical protein BIFLAC_00089 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219620226|gb|ACL28383.1| putative membrane protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248545|gb|ACS45485.1| hypothetical protein Balac_0089 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250113|gb|ACS47052.1| hypothetical protein Balat_0089 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289177858|gb|ADC85104.1| Hypothetical exported protein with FHA domain [Bifidobacterium
animalis subsp. lactis BB-12]
gi|295793140|gb|ADG32675.1| hypothetical protein BalV_0087 [Bifidobacterium animalis subsp.
lactis V9]
gi|340364239|gb|AEK29530.1| Hypothetical exported protein with FHA domain [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|345282011|gb|AEN75865.1| FHA domain protein [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041863|gb|EHN18344.1| hypothetical protein FEM_08737 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386652717|gb|AFJ15847.1| FHA-domain-containing protein [Bifidobacterium animalis subsp.
lactis B420]
gi|386654278|gb|AFJ17407.1| FHA-domain-containing protein [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 181
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G ++ S I +GR N V + D+ +SS H + + +G W I+DL
Sbjct: 89 LVIIDGPLAGTSVPLN-SSVITLGR-AASNTVVLDDEFVSSHHARVYPDPNTGVWAIEDL 146
Query: 66 DSCNGTFLN 74
S NGT +N
Sbjct: 147 HSTNGTVVN 155
>gi|413945070|gb|AFW77719.1| hypothetical protein ZEAMMB73_338367 [Zea mays]
Length = 539
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLII-------ESVSGKWT------IQDLDSCNGTFLNST 76
GR + DV S +H ++ E + G T + DLDS NGTF+N
Sbjct: 446 FGRERKVADVPTDHPSCSKQHAVLQYRLVEKEQLDGMMTKKIRPYLMDLDSTNGTFINGN 505
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQM 104
+ P ++L E DTIK G+ + V +
Sbjct: 506 RIEPRRYYELFEKDTIKFGNSSREYVLL 533
>gi|405363068|ref|ZP_11026066.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397090011|gb|EJJ20897.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 177
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTI 62
L+M+R + E +P G + +GRI G + + D +S H L + +G ++
Sbjct: 62 LVMLRAFDALEVHFLRPEADGQEFSVGRI-EGCALVVPDPSVSKHHATLRWNAATGDCSV 120
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
+D+ S NGT++N+++L L + D + GD + ++ T+ + +A P R
Sbjct: 121 RDVGSMNGTWVNASSLHQEQEQPLNDGDALAFGDAQFLYLRTETLHAHLR-MASPGR 176
>gi|115379231|ref|ZP_01466347.1| Flp pilus assembly protein TadA [Stigmatella aurantiaca DW4/3-1]
gi|310822226|ref|YP_003954584.1| type II secretion system protein e [Stigmatella aurantiaca
DW4/3-1]
gi|115363763|gb|EAU62882.1| Flp pilus assembly protein TadA [Stigmatella aurantiaca DW4/3-1]
gi|309395298|gb|ADO72757.1| Type II secretion system protein E [Stigmatella aurantiaca
DW4/3-1]
Length = 598
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
E IEF+ ++I IGR+ ND+ + +S H I S GK+ + D+ S NGTF+N
Sbjct: 14 EQIEFEK-NEISIGRL-GDNDIVLAKGNVSKYHSRIVSKDGKFIVVDMKSTNGTFVNGKK 71
Query: 78 LPPNTPFDLRENDTIKLGD 96
+ P L+ D + +GD
Sbjct: 72 IA--APMVLKPTDKVYIGD 88
>gi|355748520|gb|EHH53003.1| hypothetical protein EGM_13555 [Macaca fascicularis]
Length = 485
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVS 57
G + RG S + + G ++ +GR G VT + IS H ++ ++
Sbjct: 15 GRSWCLRRGGMSAGWLLLEDGREVTVGR---GFGVTYQLVSKICPLMISRNHCVLKQNPE 71
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 72 GQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|395205143|ref|ZP_10395896.1| LOW QUALITY PROTEIN: FHA domain protein [Propionibacterium
humerusii P08]
gi|422441820|ref|ZP_16518629.1| FHA domain protein [Propionibacterium acnes HL037PA3]
gi|422473144|ref|ZP_16549625.1| FHA domain protein [Propionibacterium acnes HL037PA2]
gi|422573433|ref|ZP_16648995.1| FHA domain protein [Propionibacterium acnes HL044PA1]
gi|313835802|gb|EFS73516.1| FHA domain protein [Propionibacterium acnes HL037PA2]
gi|314928480|gb|EFS92311.1| FHA domain protein [Propionibacterium acnes HL044PA1]
gi|314970172|gb|EFT14270.1| FHA domain protein [Propionibacterium acnes HL037PA3]
gi|328906705|gb|EGG26477.1| LOW QUALITY PROTEIN: FHA domain protein [Propionibacterium
humerusii P08]
Length = 164
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVT--IKDDGISSKHLIIES-VSGK 59
P G+++I G R+G + G + +GR GND T I DD SS H S + G
Sbjct: 68 PTGLQVI--SGSRAGTYVPLANG--VTVGR---GNDCTLPIDDDYASSHHAEFSSGIDGA 120
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
W ++DL S NGT +N + + P L D +++G T
Sbjct: 121 WFVEDLASTNGTHVNGERI--DDPTRLSVGDEVRIGRTT 157
>gi|42522080|ref|NP_967460.1| hypothetical protein Bd0472 [Bdellovibrio bacteriovorus HD100]
gi|39574611|emb|CAE78453.1| conserved hypothetical protein with FHA domain [Bdellovibrio
bacteriovorus HD100]
Length = 557
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
++ GP++G +E K G + IGR + D+ + G+S +H I K + DL S N
Sbjct: 6 ILSGPQAGSVLELKMGKNL-IGRAPQ-CDIKLISSGVSKEHTEIAVFKDKIVVTDLRSSN 63
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLGDCTTIS-VQMITMDSQDESVAKPKRNPRRQANVP 128
GT+LN + ++ ++LGD I V + +Q+ +P+ P QA +P
Sbjct: 64 GTYLNGVRV---------QSGVMRLGDKLGIHDVIADVIPAQESRAQRPQGQPSPQAPMP 114
>gi|15239690|ref|NP_197429.1| protein phosphatase 2C 70 [Arabidopsis thaliana]
gi|2507222|sp|P46014.2|P2C70_ARATH RecName: Full=Protein phosphatase 2C 70; Short=AtPP2C70; AltName:
Full=Kinase-associated protein phosphatase
gi|1709236|gb|AAB38148.1| kinase associated protein phosphatase [Arabidopsis thaliana]
gi|15027993|gb|AAK76527.1| putative kinase associated protein phosphatase [Arabidopsis
thaliana]
gi|21436053|gb|AAM51227.1| putative kinase associated protein phosphatase [Arabidopsis
thaliana]
gi|332005296|gb|AED92679.1| protein phosphatase 2C 70 [Arabidopsis thaliana]
Length = 581
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPP----- 80
+++GR V +D+ +KD +S KH + S KW + D+ S NGT +NS ++
Sbjct: 208 VKLGR-VSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGS 266
Query: 81 ---NTPFDLRENDTIKLGDCTTISVQM 104
P +L +D I LG T + V++
Sbjct: 267 RKWGNPVELASDDIITLGTTTKVYVRI 293
>gi|223949749|gb|ACN28958.1| unknown [Zea mays]
gi|413945069|gb|AFW77718.1| hypothetical protein ZEAMMB73_338367 [Zea mays]
Length = 538
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLII-------ESVSGKWT------IQDLDSCNGTFLNST 76
GR + DV S +H ++ E + G T + DLDS NGTF+N
Sbjct: 445 FGRERKVADVPTDHPSCSKQHAVLQYRLVEKEQLDGMMTKKIRPYLMDLDSTNGTFINGN 504
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQM 104
+ P ++L E DTIK G+ + V +
Sbjct: 505 RIEPRRYYELFEKDTIKFGNSSREYVLL 532
>gi|311260342|ref|XP_001927699.2| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Sus scrofa]
Length = 487
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSC 68
+ E + + G ++ +GR G VT + IS H ++ ++ G+WTI D S
Sbjct: 26 NAEWLLLEDGKEVTVGR---GFGVTYQLVSKICPLMISRNHCVLKQNAEGQWTITDNKSL 82
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLG 95
NG +LN L P + + E D I+LG
Sbjct: 83 NGVWLNRERLEPLKVYSIHEGDHIQLG 109
>gi|304440249|ref|ZP_07400139.1| FHA domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371298|gb|EFM24914.1| FHA domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 145
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
KI +GR R + IKD+ +S HL I G + I+DL+S NGTFLN + +L
Sbjct: 69 KITMGRSNRCT-IPIKDNFVSKVHLQIFEDEGSYFIEDLNSANGTFLNGNKIED--IIEL 125
Query: 87 RENDTIKLGDCTTISVQMITMDSQ 110
R DTI +G +Q I +D++
Sbjct: 126 RNGDTIGVG-----LIQFIFVDNR 144
>gi|302662683|ref|XP_003022993.1| FHA domain protein [Trichophyton verrucosum HKI 0517]
gi|291186968|gb|EFE42375.1| FHA domain protein [Trichophyton verrucosum HKI 0517]
Length = 616
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH + G+W I+D+ S +GTFLN L PN P + +R+ D ++L
Sbjct: 318 VGFKSKVVSRKHCEFSFIGGQWHIKDVGSSSGTFLNHMRLSQPNVPSRQYAVRDGDIVQL 377
Query: 95 G 95
G
Sbjct: 378 G 378
>gi|171686114|ref|XP_001907998.1| hypothetical protein [Podospora anserina S mat+]
gi|170943018|emb|CAP68671.1| unnamed protein product [Podospora anserina S mat+]
Length = 644
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKL 94
V K +S +H GKW I+D+ S +GTFLN L PP T PF + + D ++L
Sbjct: 263 VGFKSKVVSRRHCEFWYEDGKWYIKDVKSSSGTFLNHIRLSPPGTESKPFAVNDGDIVQL 322
Query: 95 G 95
G
Sbjct: 323 G 323
>gi|145496846|ref|XP_001434413.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401538|emb|CAK67016.1| unnamed protein product [Paramecium tetraurelia]
Length = 203
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII------------ 53
+L +G +S +I K S IG+ D+ I++ +S +H +I
Sbjct: 90 WQLFPFKGTQSYPSISLKGKSVFLIGKDKEIVDILIENISVSKQHCVIQFREIKKVNSQG 149
Query: 54 ESVSG-KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
E +S K DL+S NGT+LN L P ++L E+D ++ G
Sbjct: 150 EVLSYIKPYAMDLESTNGTYLNDQQLEPARYYELLEDDVLRFG 192
>gi|392562702|gb|EIW55882.1| hypothetical protein TRAVEDRAFT_130054 [Trametes versicolor
FP-101664 SS1]
Length = 831
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I +++IGR V + +G +S +H + S
Sbjct: 15 PALYLYPLNDTFIPKHISLASNQRVKIGRQTNAKTVPQERNGYFDSKVLSRQHAEVWEDS 74
Query: 58 GKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
GK I+D+ S NGTF+N L P + P++L+ +D ++ G
Sbjct: 75 GKIFIKDVKSSNGTFINGERLSPEGLESDPYELKSDDVVEFG 116
>gi|325089060|gb|EGC42370.1| cytoplasm to vacuole targeting Vps64 [Ajellomyces capsulatus H88]
Length = 760
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ V G R T+ + P +R+GR V +G +S +H
Sbjct: 162 DPPAILTLLPVNGTFERKQITVPYFP-EVLRVGRQTNAKTVPTPVNGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+ +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 221 VWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|395772059|ref|ZP_10452574.1| hypothetical protein Saci8_19898 [Streptomyces acidiscabies 84-104]
Length = 131
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N+ P P P L++ D + +G
Sbjct: 62 VPPEDPGVSHQHAVLVQQPDGTWAVVDQNSTNGTTVNNGEEPIQPFVPIPLQDGDRVHVG 121
Query: 96 DCTTISVQ 103
TTI+++
Sbjct: 122 AWTTITIR 129
>gi|367021112|ref|XP_003659841.1| hypothetical protein MYCTH_2297312 [Myceliophthora thermophila ATCC
42464]
gi|347007108|gb|AEO54596.1| hypothetical protein MYCTH_2297312 [Myceliophthora thermophila ATCC
42464]
Length = 745
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 4 PGMKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIE 54
P + L+ + G R T+ F P + +RIGR V +G +S +H I
Sbjct: 131 PVLYLLSLNGSFERKTITVPFFPDT-LRIGRQTNAKTVPTPVNGYFDSKVLSRQHAEIWA 189
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
+GK I+D+ S NGTF+N T L P + P +L+ D ++LG
Sbjct: 190 DANGKIWIRDVKSSNGTFVNGTRLSPENRESDPHELQAQDHLELG 234
>gi|158520570|ref|YP_001528440.1| FHA domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158509396|gb|ABW66363.1| FHA domain containing protein [Desulfococcus oleovorans Hxd3]
Length = 226
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
G ++ + GP G + G+ + IGR + +D+ I +S KH I S I D
Sbjct: 39 GACIVFITGPSRGNVVAAHKGT-MTIGR-DQASDIVINKQYVSKKHAQIISSEDGAKIVD 96
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQD 111
S NGTFLN T + +L++ D IK+G ++ +Q +D D
Sbjct: 97 CKSTNGTFLNDTLIEQA---ELKDRDEIKIG---SVIMQYFRIDLND 137
>gi|418474872|ref|ZP_13044321.1| hypothetical protein SMCF_7344, partial [Streptomyces coelicoflavus
ZG0656]
gi|371544509|gb|EHN73220.1| hypothetical protein SMCF_7344, partial [Streptomyces coelicoflavus
ZG0656]
Length = 173
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L++ D + +G
Sbjct: 104 VPPEDPGVSHQHAVLVQQQDGNWAVVDQNSTNGTTVNGGEEPIQPFVPVPLQDGDRVHVG 163
Query: 96 DCTTISV 102
TTI++
Sbjct: 164 AWTTITI 170
>gi|158321598|ref|YP_001514105.1| FHA domain-containing protein [Alkaliphilus oremlandii OhILAs]
gi|158141797|gb|ABW20109.1| FHA domain containing protein [Alkaliphilus oremlandii OhILAs]
Length = 148
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIR-IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P +KL+ + + +EF KI IGR + ND+ + D ISS H I G++ +
Sbjct: 46 PYLKLVNRKERLDFDVLEFYDLRKITTIGR-AKNNDIQLLDKYISSDHAKIIMDEGEYFL 104
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
+D+ S NGT+LN+T + LR D I +G + V+
Sbjct: 105 EDVGSVNGTYLNNTKIDDVVK--LRNGDRIGVGQVEFLFVK 143
>gi|55925492|ref|NP_991116.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Danio rerio]
gi|41351026|gb|AAH65643.1| Zgc:55936 [Danio rerio]
Length = 531
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 46 ISSKHLIIESVSGK-WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H + + G+ WT+ D S NG ++N +PP+TP L ++D+++LG
Sbjct: 64 ISRIHCVFKLNEGRQWTVTDNKSLNGVWVNGKRIPPSTPCILHQSDSVRLG 114
>gi|334335584|ref|YP_004540736.1| FHA domain-containing protein [Isoptericola variabilis 225]
gi|334105952|gb|AEG42842.1| FHA domain containing protein [Isoptericola variabilis 225]
Length = 173
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G ++ GS I IGR + + DD SS+H I +W ++DL
Sbjct: 81 RLVVTAGPLTGTSLPLG-GSSILIGR-SPACTLVLDDDYSSSRHARIYPQGDQWFVEDLG 138
Query: 67 SCNGTFLNS------TTLPPN 81
S NGTFL T LPP
Sbjct: 139 STNGTFLGDHQVTGPTPLPPG 159
>gi|338532764|ref|YP_004666098.1| hypothetical protein LILAB_15585 [Myxococcus fulvus HW-1]
gi|337258860|gb|AEI65020.1| hypothetical protein LILAB_15585 [Myxococcus fulvus HW-1]
Length = 465
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
V + D +S H IE V G W ++DL S NGT LN L P L D +++GD
Sbjct: 61 VALDDARLSRGHARIEHVGGTWFVEDLGSHNGTRLNGRPLTGREP--LAWGDVLRMGDTL 118
Query: 99 TISVQ 103
+ +
Sbjct: 119 FVFAE 123
>gi|297199741|ref|ZP_06917138.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297147480|gb|EFH28645.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 200
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L++ D + +G
Sbjct: 131 VPPEDPGVSHQHAVLVQQPDGSWAVVDQNSTNGTTVNGAEEPITPFVPVPLQDGDRVHVG 190
Query: 96 DCTTISV 102
TTI++
Sbjct: 191 AWTTITI 197
>gi|15614340|ref|NP_242643.1| hypothetical protein BH1777, partial [Bacillus halodurans C-125]
gi|10174395|dbj|BAB05496.1| BH1777 [Bacillus halodurans C-125]
Length = 230
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 8 LIMVRGPRSGETIEFKPGSKI-------RIGRIVRGN--DVTIKDDGISSKHLIIESVSG 58
LI+ RG + ++PG+ IGR+ + D+ + IS KH ++ G
Sbjct: 7 LIVERG------VPYEPGTVFTVKKESWSIGRLGKSWKPDIAFDNVFISRKHALLYVEEG 60
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG-DCTTISVQMITMD 108
+ ++DLDS +GT++N L P+ P L D + L D ++ I M+
Sbjct: 61 QVFVKDLDSKHGTYVNDQRLAPHAPERLSHGDRLSLAKDIVVLTFSAIDME 111
>gi|38232694|ref|NP_938461.1| hypothetical protein DIP0058 [Corynebacterium diphtheriae NCTC
13129]
gi|38198952|emb|CAE48566.1| Putative secreted protein [Corynebacterium diphtheriae]
Length = 162
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP +G +++ ++I +GR + D + DD S++H + +W +DLD
Sbjct: 69 QIVVVEGPLTGSSMQLDSLTEITLGR-SKDCDFVVGDDYASARHARLIKRGSEWFAEDLD 127
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
S NGT++ + + P + IK+G T
Sbjct: 128 SRNGTYVGGYRI--DQPEKVSAGSDIKIGRTTV 158
>gi|296268048|ref|YP_003650680.1| FHA domain-containing protein [Thermobispora bispora DSM 43833]
gi|296090835|gb|ADG86787.1| FHA domain containing protein [Thermobispora bispora DSM 43833]
Length = 156
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTI--KDDGISSKHLIIESVSGKWTIQD 64
+L++ GP G I+ S I IGR +D T+ DD SS+H + G+W ++D
Sbjct: 64 QLVVTAGPLQGTVIDLT-DSPITIGR---ASDATLVLNDDYASSRHARLFPQDGQWIVED 119
Query: 65 LDSCNGTFL 73
L S NGT+L
Sbjct: 120 LGSTNGTYL 128
>gi|329935608|ref|ZP_08285418.1| hypothetical protein SGM_0910 [Streptomyces griseoaurantiacus M045]
gi|329304953|gb|EGG48823.1| hypothetical protein SGM_0910 [Streptomyces griseoaurantiacus M045]
Length = 118
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 42 KDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLGDCT 98
+D G+S +H ++++ G W + D +S NGT +N P P P L++ D + +G T
Sbjct: 52 EDPGVSHQHAMLVQQQDGTWAVVDQNSTNGTTVNGGEEPIQPFVPVPLQDGDRVHVGAWT 111
Query: 99 TISVQ 103
TI++
Sbjct: 112 TITIH 116
>gi|283458958|ref|YP_003363606.1| hypothetical protein RMDY18_19540 [Rothia mucilaginosa DY-18]
gi|283135021|dbj|BAI65786.1| protein containing forkhead-associated domain [Rothia mucilaginosa
DY-18]
Length = 154
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGND--VTIKDDGISSKHLIIESVSGKWTIQD 64
+L++ G ++G ++ I IGR ND V+++DD S +H + +W ++D
Sbjct: 62 QLVITAGAQAGAMMQLG-DHPITIGR---ANDIEVSLQDDYASGRHARLFPQGSRWFLED 117
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
L+S NGTF+N L TP + D ++G T
Sbjct: 118 LNSTNGTFVNGERLTRATP--IEPGDDFRVGGTT 149
>gi|294790168|ref|ZP_06755326.1| putative FHA domain protein [Scardovia inopinata F0304]
gi|294458065|gb|EFG26418.1| putative FHA domain protein [Scardovia inopinata F0304]
Length = 173
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 8 LIMVRGPRSGETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQD 64
L ++ GP SG T + GS+ I +GR N V + D+ +SS H + ++ +G W I+D
Sbjct: 81 LTIIDGPLSGTT--YTLGSQSITLGR-ASDNVVVLNDEFVSSHHARVYVDPTTGTWAIED 137
Query: 65 LDSCNGTFL------NSTTLPPNTP-------FDLR 87
L S NGT + +S LP P F+LR
Sbjct: 138 LGSTNGTVVDGQRLSHSVPLPAGVPVRIGGTSFELR 173
>gi|217969350|ref|YP_002354584.1| FHA domain containing protein [Thauera sp. MZ1T]
gi|217506677|gb|ACK53688.1| FHA domain containing protein [Thauera sp. MZ1T]
Length = 250
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I + IS H +I ++ ++D +S NGT+LN + N LR ND I+LG
Sbjct: 33 NDIQIDNLAISGHHAVITCITNDAFLEDQNSTNGTYLNGQPVKKNV---LRNNDVIELG 88
>gi|389640995|ref|XP_003718130.1| hypothetical protein MGG_00849 [Magnaporthe oryzae 70-15]
gi|351640683|gb|EHA48546.1| hypothetical protein MGG_00849 [Magnaporthe oryzae 70-15]
Length = 341
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query: 3 PPG---MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII------ 53
PP +L + +G +TI S +GR D+ + +S +H +I
Sbjct: 219 PPARDDWRLFVFKGDDLVDTIPLASRSCWLVGRDAAVADLLAEHPSVSKQHAVIQFRHVE 278
Query: 54 ------ESVSG-KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
+ V G K + DL+S NGT +N +P + +LR D +K G T V M++
Sbjct: 279 KRNEFGDRVGGVKPYLLDLESANGTHINGDQVPESRYLELRHKDVVKFGQSTREYVVMLS 338
>gi|402833074|ref|ZP_10881696.1| FHA domain protein [Selenomonas sp. CM52]
gi|402281441|gb|EJU30076.1| FHA domain protein [Selenomonas sp. CM52]
Length = 150
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I D +S +H ++ V+ ++ I+D+ S N T+LN L L+ D I++G
Sbjct: 86 NDIRIPDSFVSHRHAVVRLVNNQYVIEDMGSMNHTYLNDAILQGKAY--LKPGDLIRIGF 143
Query: 97 CT 98
T
Sbjct: 144 VT 145
>gi|357480781|ref|XP_003610676.1| Kinase-associated protein phosphatase [Medicago truncatula]
gi|355512011|gb|AES93634.1| Kinase-associated protein phosphatase [Medicago truncatula]
Length = 583
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRI----GRIVRGNDVTIKDDGISSKHLIIESV--SGK 59
+ L ++ GP G+ + R+ GRI +D IKD+ +S KH +I+ + K
Sbjct: 177 LTLEVISGPSRGQQWSVQSTESSRLPLTLGRIF-PSDFLIKDNEVSGKHALIKWNLDTMK 235
Query: 60 WTIQDLDSCNGTFLNSTTL--------PPNTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
W + D+ S NGT LNS ++ P +L D I LG + I V + + +
Sbjct: 236 WELVDMGSLNGTLLNSKSINRLDTERRHWGDPMNLANGDVITLGTTSKIIVHITSQNHH 294
>gi|298714848|emb|CBJ25747.1| Protein kinase domain containing protein [Ectocarpus siliculosus]
Length = 576
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 8 LIMVRGPRSGETIEFKP-GSKIRIGRIV-RGNDVTI-KDDGISSKHLIIESVSGKWTIQD 64
L +V GP GET+ K G+++R+GR R N + + KD +S KH I+ + ++D
Sbjct: 480 LEVVSGPHEGETLRMKASGAEVRVGRNAPRRNGLRLDKDFEVSDKHAILRPGADGIGLED 539
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
L S NG+F+N L L+ D +++G
Sbjct: 540 LGSLNGSFVNEDRL--EGAAVLQHGDVLQVG 568
>gi|83774896|dbj|BAE65019.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 710
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------IQDLDSCNGTFLNSTTLPP 80
+RIGR V +G ++ + W I+D+ S NGTF+N T L P
Sbjct: 150 VRIGRQTNAKTVPTPANGFFDSKVLSRQHAEVWAEKGGRIFIRDVKSSNGTFVNGTRLSP 209
Query: 81 ----NTPFDLRENDTIKLG 95
+ P +LREND ++LG
Sbjct: 210 ENRESEPHELRENDQLELG 228
>gi|317156989|ref|XP_001826152.2| cytoplasm to vacuole targeting Vps64 [Aspergillus oryzae RIB40]
gi|391865023|gb|EIT74315.1| FHA domain protein [Aspergillus oryzae 3.042]
Length = 749
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------IQDLDSCNGTFLNSTTLPP 80
+RIGR V +G ++ + W I+D+ S NGTF+N T L P
Sbjct: 189 VRIGRQTNAKTVPTPANGFFDSKVLSRQHAEVWAEKGGRIFIRDVKSSNGTFVNGTRLSP 248
Query: 81 ----NTPFDLRENDTIKLG 95
+ P +LREND ++LG
Sbjct: 249 ENRESEPHELRENDQLELG 267
>gi|295094181|emb|CBK83272.1| FOG: FHA domain [Coprococcus sp. ART55/1]
Length = 468
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+ +GR R D I+D +S +H+ I + K ++DLDS NGT +N LP + L
Sbjct: 390 VVLGRDRRQADQVIEDISVSRRHIRIYEDAEKIYVEDLDSTNGTVINGIRLPTGRSWQLA 449
Query: 88 ENDTIKLG 95
+ D + +G
Sbjct: 450 DRDVLCIG 457
>gi|238493165|ref|XP_002377819.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus flavus
NRRL3357]
gi|220696313|gb|EED52655.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus flavus
NRRL3357]
Length = 749
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------IQDLDSCNGTFLNSTTLPP 80
+RIGR V +G ++ + W I+D+ S NGTF+N T L P
Sbjct: 189 VRIGRQTNAKTVPTPANGFFDSKVLSRQHAEVWAEKGGRIFIRDVKSSNGTFVNGTRLSP 248
Query: 81 ----NTPFDLRENDTIKLG 95
+ P +LREND ++LG
Sbjct: 249 ENRESEPHELRENDQLELG 267
>gi|403740035|ref|ZP_10952326.1| hypothetical protein AUCHE_18_00970 [Austwickia chelonae NBRC
105200]
gi|403190425|dbj|GAB79096.1| hypothetical protein AUCHE_18_00970 [Austwickia chelonae NBRC
105200]
Length = 160
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGN---DVTIKDDGISSKHLIIESVSGKWTIQD 64
L++V GP G T+ + S + +GR N + + DD S +H I +G W ++D
Sbjct: 69 LVIVEGPLRGTTVPLRS-SGVLLGR----NPECTLVLDDDFSSGRHARIFEEAGHWYLED 123
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
L+S NGTF++ + + P ++R+ +++G
Sbjct: 124 LNSTNGTFVSGQRI--SQPIEMRDGSQLRIG 152
>gi|402219114|gb|EJT99188.1| hypothetical protein DACRYDRAFT_23804 [Dacryopinax sp. DJM-731 SS1]
Length = 912
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 27 KIRIGRIVRGNDVTIKDDG------ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
K+RIGR V + +G +S H + +GK I+D+ S NGTF+NS L P
Sbjct: 126 KVRIGRQTNARTVPGERNGYFDSKVLSRMHAEVWEENGKILIKDVKSSNGTFINSERLSP 185
Query: 81 ----NTPFDLRENDTIKLG 95
+ PF+L+ D ++ G
Sbjct: 186 EGAESEPFELKSEDIVEFG 204
>gi|384101569|ref|ZP_10002608.1| forkhead domain-containing protein [Rhodococcus imtechensis
RKJ300]
gi|419966246|ref|ZP_14482177.1| forkhead domain-containing protein [Rhodococcus opacus M213]
gi|424852085|ref|ZP_18276482.1| forkhead domain-containing protein [Rhodococcus opacus PD630]
gi|432336392|ref|ZP_19587904.1| forkhead domain-containing protein [Rhodococcus wratislaviensis
IFP 2016]
gi|356666750|gb|EHI46821.1| forkhead domain-containing protein [Rhodococcus opacus PD630]
gi|383841123|gb|EID80418.1| forkhead domain-containing protein [Rhodococcus imtechensis
RKJ300]
gi|414568336|gb|EKT79098.1| forkhead domain-containing protein [Rhodococcus opacus M213]
gi|430776701|gb|ELB92112.1| forkhead domain-containing protein [Rhodococcus wratislaviensis
IFP 2016]
Length = 206
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 18 ETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNS 75
T++ P S ++ IGR + + +DD +S H ++E V WTI D S NGTF+N
Sbjct: 19 HTVDLSPASARVTIGRSPGSDLLLTEDDEVSRLHAVLECVGSHWTILDDGLSRNGTFVNG 78
Query: 76 TTLPPNTPFDLRENDTIKLG 95
L LR+ D+I++G
Sbjct: 79 ERLAGRRR--LRQGDSIRIG 96
>gi|443694272|gb|ELT95456.1| hypothetical protein CAPTEDRAFT_202625 [Capitella teleta]
Length = 752
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 33 IVRGNDVTI--KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREND 90
I R DVTI IS +H +++ +WT+ D S NG ++N L P L++ D
Sbjct: 178 IGRSPDVTICLMSTMISRRHAVLKKKDAEWTVMDNKSINGVYVNEHQLTPLEDHQLKDGD 237
Query: 91 TIKLG 95
I++G
Sbjct: 238 VIRVG 242
>gi|156743547|ref|YP_001433676.1| FHA modulated ABC efflux pump ATPase/integral membrane protein
[Roseiflexus castenholzii DSM 13941]
gi|156234875|gb|ABU59658.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Roseiflexus castenholzii DSM 13941]
Length = 903
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 17 GETIEFKPGSK-IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS 75
G T E G + + IGR ND+ I +S +H IE I D+ S NG
Sbjct: 97 GHTFEVTLGQQSLSIGR-APDNDIVITSRFVSGRHARIEPHGVAHQIVDIGSTNGLLFKG 155
Query: 76 TTLPPNTPFDLRENDTIKLGDCTT 99
LP N P L ++D +++GD T
Sbjct: 156 KRLPANAPHVLADSDVLRIGDPAT 179
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
+I IGR G ++ + + +S +H +I+ V+GK ++D+ S NGTF+N + +T L
Sbjct: 213 QITIGR--EGCEILLDNPQVSRRHAVIDRVNGKHVLRDVGSTNGTFVNGRRITEHT---L 267
Query: 87 RENDTIKLG 95
+ D I++G
Sbjct: 268 AKGDIIQIG 276
>gi|108762453|ref|YP_630848.1| Pkn9 associate protein 1 [Myxococcus xanthus DK 1622]
gi|45935003|gb|AAS79536.1| Pkn9 associate protein 1 [Myxococcus xanthus]
gi|108466333|gb|ABF91518.1| Pkn9 associate protein 1 [Myxococcus xanthus DK 1622]
Length = 492
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + RGP +G+ + K G+ + IGR +D+ ++ IS +H + ++ ++DL S
Sbjct: 96 LYVERGPGAGQLVPVKQGALV-IGR-SSSSDLRLQHPSISRRHAHLTRRGERFFLKDLSS 153
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
NGTFLN + + +L D + LG+
Sbjct: 154 QNGTFLNRHRI--TSEVELMPGDEVSLGNA 181
>gi|255326543|ref|ZP_05367624.1| FHA domain containing protein [Rothia mucilaginosa ATCC 25296]
gi|422325629|ref|ZP_16406664.1| hypothetical protein HMPREF0737_01774 [Rothia mucilaginosa M508]
gi|255296419|gb|EET75755.1| FHA domain containing protein [Rothia mucilaginosa ATCC 25296]
gi|353343120|gb|EHB87440.1| hypothetical protein HMPREF0737_01774 [Rothia mucilaginosa M508]
Length = 154
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGND--VTIKDDGISSKHLIIESVSGKWTIQD 64
+L++ G ++G ++ I IGR ND V+++DD S +H + +W ++D
Sbjct: 62 QLVITAGAQAGAMMQLG-DHPITIGR---ANDIEVSLQDDYASGRHARLFPQGSRWFLED 117
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
L+S NGTF+N L TP + D ++G T
Sbjct: 118 LNSTNGTFVNGERLTRATP--IEPGDDFRVGGTT 149
>gi|338535207|ref|YP_004668541.1| putative adenylate cyclase [Myxococcus fulvus HW-1]
gi|337261303|gb|AEI67463.1| putative adenylate cyclase [Myxococcus fulvus HW-1]
Length = 554
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 11 VRGPR------SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
+RGPR G EF G +GR N + + D +S +H +IE V + ++D
Sbjct: 15 IRGPRLTGRFADGTLGEFPLGPATSLGRH-PSNTLRLVDREVSKEHAVIERVGKDFVLKD 73
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
L S NGTF+N + LR+ D I LG I
Sbjct: 74 LGSSNGTFVNGRRV---KELKLRDGDEISLGASRLI 106
>gi|209522455|ref|ZP_03271055.1| FHA domain containing protein [Burkholderia sp. H160]
gi|209497107|gb|EDZ97362.1| FHA domain containing protein [Burkholderia sp. H160]
Length = 213
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 12 RGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGT 71
RG + IE KP +RIG ND+ ++D +S KH I SG + DL S NGT
Sbjct: 109 RGATNSYAIE-KP--NVRIG-ADEANDLIVRDYYVSRKHANIRFESGTLYLSDLGSSNGT 164
Query: 72 FLNSTTLPPNTPFDLRENDTIKLGDCT 98
FLN + L D I+ G T
Sbjct: 165 FLNGARV--KRVMTLSPGDQIRFGHTT 189
>gi|400537307|ref|ZP_10800840.1| hypothetical protein MCOL_V223043 [Mycobacterium colombiense CECT
3035]
gi|400329336|gb|EJO86836.1| hypothetical protein MCOL_V223043 [Mycobacterium colombiense CECT
3035]
Length = 887
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+GR V+ DV I D IS HLI+ G+W D S NGT+LN +P D+ +
Sbjct: 3 VGRDVQA-DVRIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VVDIHDG 58
Query: 90 DTIKLGD 96
+I +G+
Sbjct: 59 QSIHIGN 65
>gi|376247415|ref|YP_005139359.1| putative secreted protein [Corynebacterium diphtheriae HC04]
gi|376250220|ref|YP_005137101.1| putative secreted protein [Corynebacterium diphtheriae HC03]
gi|376256064|ref|YP_005143955.1| putative secreted protein [Corynebacterium diphtheriae VA01]
gi|376283552|ref|YP_005156762.1| putative secreted protein [Corynebacterium diphtheriae 31A]
gi|376286580|ref|YP_005159146.1| putative secreted protein [Corynebacterium diphtheriae BH8]
gi|376289254|ref|YP_005161501.1| putative secreted protein [Corynebacterium diphtheriae C7 (beta)]
gi|376292167|ref|YP_005163841.1| putative secreted protein [Corynebacterium diphtheriae HC02]
gi|371577067|gb|AEX40735.1| putative secreted protein [Corynebacterium diphtheriae 31A]
gi|371583914|gb|AEX47579.1| putative secreted protein [Corynebacterium diphtheriae BH8]
gi|372102650|gb|AEX66247.1| putative secreted protein [Corynebacterium diphtheriae C7 (beta)]
gi|372109490|gb|AEX75550.1| putative secreted protein [Corynebacterium diphtheriae HC02]
gi|372111724|gb|AEX77783.1| putative secreted protein [Corynebacterium diphtheriae HC03]
gi|372113983|gb|AEX80041.1| putative secreted protein [Corynebacterium diphtheriae HC04]
gi|372118581|gb|AEX82315.1| putative secreted protein [Corynebacterium diphtheriae VA01]
Length = 162
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP +G +++ ++I +GR + D + DD S++H + +W +DLD
Sbjct: 69 QIVVVEGPLTGSSMQLDSLTEITLGR-SKDCDFVVGDDYASARHARLIKRGSEWFAEDLD 127
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
S NGT++ + + P + IK+G T
Sbjct: 128 SRNGTYVGGYRI--DQPEKVSAGSDIKIGRTTV 158
>gi|239818146|ref|YP_002947056.1| FHA domain containing protein [Variovorax paradoxus S110]
gi|239804723|gb|ACS21790.1| FHA domain containing protein [Variovorax paradoxus S110]
Length = 218
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ + + +S +H ++ + I+DL+S NGT++N+ + L++ND I++G
Sbjct: 31 NDIVLDNLAVSGEHAVLHMRGAEVEIEDLNSTNGTYVNAIVVQKQQ--KLKDNDVIEIGG 88
Query: 97 C 97
C
Sbjct: 89 C 89
>gi|258568190|ref|XP_002584839.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906285|gb|EEP80686.1| predicted protein [Uncinocarpus reesii 1704]
Length = 623
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P S +RIGR V +G +S +H I GK I+D+ S NGT
Sbjct: 55 TVPYFPES-LRIGRQTNPKTVPSPVNGYFDSKVLSRQHAEIWADRQGKIWIRDVKSSNGT 113
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 114 FVNGQRLSPENKDSEPHELREHDTLELG 141
>gi|300744051|ref|ZP_07073070.1| putative FHA domain protein [Rothia dentocariosa M567]
gi|300379776|gb|EFJ76340.1| putative FHA domain protein [Rothia dentocariosa M567]
Length = 304
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 25 GSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82
G+ + IGR G+D +++ D GIS +HL I G + DL S NGT LN P T
Sbjct: 222 GAPLVIGR---GSDASVRLADKGISRRHLQISRQGGNYVATDLGSTNGTRLNG--FPLKT 276
Query: 83 PFDLRENDTIKLGDCTTI 100
P L++ ++LG +
Sbjct: 277 PTVLQDGAVLQLGGARVL 294
>gi|300867741|ref|ZP_07112386.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria sp. PCC 6506]
gi|300334324|emb|CBN57558.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Oscillatoria sp. PCC 6506]
Length = 893
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I IGR N + + + IS H I ++ + DL+S +G LN+ + PNTP+ L
Sbjct: 27 ITIGR-ATDNHLILNEPLISRHHAQIVWQGDRYILADLNSTDGLRLNNVQVKPNTPYPLA 85
Query: 88 ENDTIKLG 95
+ DTI++G
Sbjct: 86 DGDTIRIG 93
>gi|311112621|ref|YP_003983843.1| hypothetical protein HMPREF0733_10952 [Rothia dentocariosa ATCC
17931]
gi|310944115|gb|ADP40409.1| conserved hypothetical protein [Rothia dentocariosa ATCC 17931]
Length = 303
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 25 GSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82
G+ + IGR G+D +++ D GIS +HL I G + DL S NGT LN P T
Sbjct: 221 GAPLVIGR---GSDASVRLADKGISRRHLQISRQGGNYVATDLGSTNGTRLNG--FPLKT 275
Query: 83 PFDLRENDTIKLGDCTTI 100
P L++ ++LG +
Sbjct: 276 PTVLQDGAVLQLGGARVL 293
>gi|340518406|gb|EGR48647.1| predicted protein [Trichoderma reesei QM6a]
Length = 582
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 28/120 (23%)
Query: 4 PGMKLIMVRGPRSGE-TIEFKPGSK--------IRIGRI---------------VRGNDV 39
P ++ PRS ++ F P S+ IR+GR G V
Sbjct: 194 PSIRFSAYYDPRSTRPSLSFPPISRTLSNGTEVIRVGRYSERDTQALAGASGHSASGAPV 253
Query: 40 TIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
K +S +H GKW I+D+ S +GTFLN L P + F + + D ++LG
Sbjct: 254 GFKSKVVSRRHCEFWYEDGKWYIKDVKSSSGTFLNHIRLSPPSQESKAFPVNDGDIVQLG 313
>gi|168704347|ref|ZP_02736624.1| hypothetical protein GobsU_32724 [Gemmata obscuriglobus UQM 2246]
Length = 594
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 8 LIMVRGPRSGETIEFKPGSK----IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
LI+++ P T + P + I IGR + V I +S +H I G++ I+
Sbjct: 4 LILLKAPEGTATNKNVPLNADVLSIVIGRDEKECQVVIPHHAVSRRHAQIVRAGGQFYIE 63
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRR 123
DL S N TF+NS +PP L+ +D IK+ D DE +P+ P
Sbjct: 64 DLKSRNRTFVNSKEVPPGGRQALKPDDRIKICD--------FLYRFHDERAVRPQPLPDW 115
Query: 124 QANVPG 129
+ + G
Sbjct: 116 LSKIRG 121
>gi|149919116|ref|ZP_01907600.1| FHA domain protein [Plesiocystis pacifica SIR-1]
gi|149820046|gb|EDM79467.1| FHA domain protein [Plesiocystis pacifica SIR-1]
Length = 456
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L +V GPR+G T F G + GN + + DD S +H+ + + +QDL S
Sbjct: 110 LRVVAGPRAGAT--FLLGERTCTAGRDPGNVIQLVDDDTSRRHVQFKWTGQHYEVQDLSS 167
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGTF+N + + P L + D +++G
Sbjct: 168 TNGTFVNEARI--DEPVRLDDGDLVQVG 193
>gi|384449024|ref|YP_005661626.1| type III secretion apparatus protein, YscD/HrpQ family
[Chlamydophila pneumoniae LPCoLN]
gi|269302498|gb|ACZ32598.1| type III secretion apparatus protein, YscD/HrpQ family
[Chlamydophila pneumoniae LPCoLN]
Length = 845
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
++LI+ GP SG + G IGR ND+ I+D + + II G + I +
Sbjct: 2 AVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITN 61
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
LD +N + T L+ DTI LG
Sbjct: 62 LDDTIPIVVNGVAIQETT--QLKNEDTILLG 90
>gi|303276080|ref|XP_003057334.1| KH domain-containing protein [Micromonas pusilla CCMP1545]
gi|226461686|gb|EEH58979.1| KH domain-containing protein [Micromonas pusilla CCMP1545]
Length = 293
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 18/124 (14%)
Query: 4 PGMK---LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS-GK 59
P +K + G +GE + S GR + DV S +H +I+ K
Sbjct: 171 PSLKWRLYVFKNGELTGEPLHIHRQSYYLFGRERKVVDVPTDHPSCSKQHAVIQYRERTK 230
Query: 60 W-------------TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
W I DL+S NGT LN + P ++L E DTIK G T V ++
Sbjct: 231 WDDDEGADVKVAVPYIMDLNSTNGTHLNGDRIEPQRYYELLEKDTIKFGMSTREYV-LLN 289
Query: 107 MDSQ 110
DS+
Sbjct: 290 EDSK 293
>gi|15618622|ref|NP_224908.1| FHA domain-containing protein [Chlamydophila pneumoniae CWL029]
gi|15836244|ref|NP_300768.1| FHA domain-containing protein [Chlamydophila pneumoniae J138]
gi|16752328|ref|NP_444586.1| hypothetical protein CP0034 [Chlamydophila pneumoniae AR39]
gi|4377015|gb|AAD18851.1| adenylate cyclase-like protein [Chlamydophila pneumoniae CWL029]
gi|7188974|gb|AAF37929.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8979084|dbj|BAA98919.1| FHA domain [Chlamydophila pneumoniae J138]
Length = 845
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
++LI+ GP SG + G IGR ND+ I+D + + II G + I +
Sbjct: 2 AVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITN 61
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
LD +N + T L+ DTI LG
Sbjct: 62 LDDTIPIVVNGVAIQETT--QLKNEDTILLG 90
>gi|299143994|ref|ZP_07037074.1| FHA-domain-containing protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518479|gb|EFI42218.1| FHA-domain-containing protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 145
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 18 ETIEFKPGSKIRI-GRIVRGN----DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
+T+ FK + G++V G D+ IKD +S +H+ I + ++DLDS NGTF
Sbjct: 54 DTLNFKMHEYYVLKGKVVAGRSSKCDIVIKDKFVSKEHIKIIEDGNSYFLEDLDSANGTF 113
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
LN + +LR D I +G +Q I +D++
Sbjct: 114 LNGE--EVHDIIELRNGDKIGVG-----FIQFIFVDNR 144
>gi|255552313|ref|XP_002517201.1| kinase associated protein phosphatase, putative [Ricinus communis]
gi|223543836|gb|EEF45364.1| kinase associated protein phosphatase, putative [Ricinus communis]
Length = 577
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRI----GRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G K S R+ GR+ +D+ +KD +S KH +I K
Sbjct: 170 LSLEVISGPSRGLRCSIKSTSASRLPLTLGRV--SSDLLLKDSEVSGKHAMINWNMDKKK 227
Query: 60 WTIQDLDSCNGTFLNSTTLPPN--------TPFDLRENDTIKLGDCTTISVQMITMDSQD 111
W + D+ S NGT LNS + + DL D I LG + I V +T+ +++
Sbjct: 228 WELVDMGSLNGTLLNSQPINHHDSGSRQWGDAVDLSNGDIITLGTTSNIRVH-VTLKAEN 286
Query: 112 ES 113
E+
Sbjct: 287 ET 288
>gi|393212383|gb|EJC97883.1| SMAD/FHA domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 302
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII--------- 53
P G +L + +G + + S IGR D+ I+ S +H +I
Sbjct: 184 PVGWRLYIFKGKEQTDLLHIHRQSCYLIGRDKAVVDIYIEHPSCSKQHAVIQYRQVQEKD 243
Query: 54 ESVSGKWTIQ----DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
E S K ++ DL+S N TF+N +P + ++L+ D IK G T
Sbjct: 244 EFGSSKAVVKPFIIDLESTNNTFVNDEAIPTSRYYELKTGDVIKFGMST 292
>gi|374612357|ref|ZP_09685136.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium tusciae JS617]
gi|373547800|gb|EHP74515.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium tusciae JS617]
Length = 763
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
F PG I +GR + D+ I GIS HLI+ + G W D +S NG F+
Sbjct: 20 FAPGDDIVVGRDLHA-DIRIPHPGISRSHLILRHLDGGWVALDDNSSNGIFV 70
>gi|295837732|ref|ZP_06824665.1| FHA domain-containing protein [Streptomyces sp. SPB74]
gi|197699933|gb|EDY46866.1| FHA domain-containing protein [Streptomyces sp. SPB74]
Length = 173
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKWTIQDL 65
KLI+ G +G T+ G I +GR + + + DD SS+H I G+W ++DL
Sbjct: 80 KLIISEGSLTGTTVALH-GQTITLGR-AHDSTIVLDDDYASSRHARIYPDRDGQWIVEDL 137
Query: 66 DSCNGTFL--NSTTLPPNTPF 84
S NGT+L N T P P
Sbjct: 138 GSTNGTYLDRNRLTTPVPVPL 158
>gi|428182367|gb|EKX51228.1| hypothetical protein GUITHDRAFT_103147 [Guillardia theta CCMP2712]
Length = 143
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTI-KDDGISSKHLIIESVSGKWTIQD 64
++L GPR G I+ G I IGR R ND+ I +D+ +S H I ++ + D
Sbjct: 6 IELHFTSGPRLGNVIKVPNGKMISIGR-SRKNDICILQDEMVSRSHGQIRYKDRRFWLTD 64
Query: 65 LDSCNGTFLNST----TLPPNTPFDLRENDTIKLGDCTTI 100
L S NGTF+ L P L D +++G+ +
Sbjct: 65 LGSINGTFIRQKGVQRALTKEAPVQLELRDEVEMGNSIFV 104
>gi|383806776|ref|ZP_09962337.1| hypothetical protein IMCC13023_02990 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299206|gb|EIC91820.1| hypothetical protein IMCC13023_02990 [Candidatus Aquiluna sp.
IMCC13023]
Length = 162
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
++ G +G I + ++ IGR +D+ I D+ SS H + V W +QDL+S N
Sbjct: 72 VLTGRTAGTNIPLENKKEVLIGR-APSSDMVISDEFASSMHAKLVHVGADWVLQDLNSTN 130
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
GT L+ + TP +R TI++G T
Sbjct: 131 GTNLDGKKI--TTPVTIRAGMTIRIGTTT 157
>gi|366166763|ref|ZP_09466518.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 551
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR+ D ++ I H I + +G + ++DL+S NGT++N L N +++R N
Sbjct: 477 IGRLDGQVDYVHSNNAIGKMHAEIITRAGCYYLKDLNSKNGTYINGKRLESNKEYEIRNN 536
Query: 90 DTIKLGDCTTISVQM 104
D I L + I + +
Sbjct: 537 DKITLANSEFIFIVL 551
>gi|302548189|ref|ZP_07300531.1| ABC transporter, ATP-binding protein [Streptomyces hygroscopicus
ATCC 53653]
gi|302465807|gb|EFL28900.1| ABC transporter, ATP-binding protein [Streptomyces himastatinicus
ATCC 53653]
Length = 824
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D++ D +S +HL+I G W I+DLDS NGTF + ++ ++LGD
Sbjct: 38 DISCVDRRVSRRHLVIRCDGGTWVIEDLDSANGTFAEGRRI---QRIEIGHGSIVRLGDV 94
Query: 98 TT 99
+T
Sbjct: 95 ST 96
>gi|156375841|ref|XP_001630287.1| predicted protein [Nematostella vectensis]
gi|156217305|gb|EDO38224.1| predicted protein [Nematostella vectensis]
gi|400621539|gb|AFP87463.1| smad nuclear interacting protein 1-like protein, partial
[Nematostella vectensis]
Length = 170
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 13/103 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW----- 60
+L +G S + S +GR D+ I S +H I++ +
Sbjct: 51 WRLYPFKGEESLPVMYIHRQSAYLLGRQRHIADIPIDHPSCSKQHAILQYRLVNYEKPDG 110
Query: 61 --------TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ DLDS NGTFLN+ + P ++L+E D +K G
Sbjct: 111 SKGRRVKPYVLDLDSANGTFLNNQKVEPRRYYELKERDVLKFG 153
>gi|289578948|ref|YP_003477575.1| FHA domain-containing protein [Thermoanaerobacter italicus Ab9]
gi|297545160|ref|YP_003677462.1| FHA domain-containing protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528661|gb|ADD03013.1| FHA domain containing protein [Thermoanaerobacter italicus Ab9]
gi|296842935|gb|ADH61451.1| FHA domain containing protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 134
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ I+ +S++H II ++ IQDL+S NGTF+N + ++ ND I LGD
Sbjct: 71 DIVIESPYVSARHAIIRKRGRRFYIQDLNSTNGTFINGKRVKGIAK--IKNNDVITLGDV 128
>gi|148704728|gb|EDL36675.1| mCG1041576 [Mus musculus]
Length = 349
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLI-----IESVSGKWTIQ--------DLDSCNGTF 72
S +GR R D+ I S +H + +ES T+ DL S NGTF
Sbjct: 247 SAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVESTRADGTVDRSVKPFIIDLCSANGTF 306
Query: 73 LNSTTLPPNTPFDLRENDTIKLG 95
LN+ + P ++L+E+D +K G
Sbjct: 307 LNNKRIEPQRYYELKESDVLKFG 329
>gi|108757453|ref|YP_632136.1| adenylate cyclase [Myxococcus xanthus DK 1622]
gi|108461333|gb|ABF86518.1| putative adenylate cyclase [Myxococcus xanthus DK 1622]
Length = 577
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 11 VRGPR------SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
+RGPR G EF G +GR N + + D +S +H +IE V + ++D
Sbjct: 38 IRGPRLTGRFADGTLGEFPLGPATSLGRH-PSNTLRLVDREVSKEHAVIERVGKDFILKD 96
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
L S NGTF+N + LR+ D I LG I
Sbjct: 97 LGSSNGTFVNGRRV---KELKLRDGDEISLGASRLI 129
>gi|409047372|gb|EKM56851.1| hypothetical protein PHACADRAFT_254197 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I +++IGR V + +G +S +H + +
Sbjct: 14 PALYLYPLNDSFIPKHISLASNQRVKIGRQTNAKTVPAERNGYFDSKVLSRQHAEVWEEN 73
Query: 58 GKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG------DCTTI 100
K I+D+ S NGTF+N L P + PF+L+ +D ++ G D TTI
Sbjct: 74 AKIFIKDVKSSNGTFINGERLSPEGLESQPFELKTDDIVEFGIDIVGEDNTTI 126
>gi|333891677|ref|YP_004465552.1| zinc metalloprotease [Alteromonas sp. SN2]
gi|332991695|gb|AEF01750.1| Zinc metalloprotease (elastase) [Alteromonas sp. SN2]
Length = 780
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G IGR + + ++D+ IS +HL I+S S +T++DL+S +GT L+ L P
Sbjct: 701 GEGFVIGRSLELVHLQLRDERISRRHLRIKSHSDYFTVEDLNSTHGTMLDGERLKAFLPA 760
Query: 85 DLRENDTIKLGDCTTI 100
++ +++ D + +
Sbjct: 761 PIKHGQLLRIADFSYV 776
>gi|328947914|ref|YP_004365251.1| FHA domain-containing protein [Treponema succinifaciens DSM 2489]
gi|328448238|gb|AEB13954.1| FHA domain containing protein [Treponema succinifaciens DSM 2489]
Length = 114
Score = 43.9 bits (102), Expect = 0.13, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
+KI +GR ND+ I S H II+ + + ++D S NGTFLN +PP+
Sbjct: 38 AAKITMGR-ESDNDIVIDSKLASRHHCIIQKIRDAYFLKDEGSTNGTFLNGRRIPPDKYV 96
Query: 85 DLRENDTIKLGDCTTI 100
L D + +G I
Sbjct: 97 KLNAGDKLTIGSSNLI 112
>gi|410865157|ref|YP_006979768.1| FHA domain-containing protein [Propionibacterium acidipropionici
ATCC 4875]
gi|410821798|gb|AFV88413.1| FHA domain-containing protein [Propionibacterium acidipropionici
ATCC 4875]
Length = 165
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGND--VTIKDDGISSKHL-IIESVSG 58
EP L ++ G R+G I+ +I +GR G D + I+DD S+ H + + G
Sbjct: 64 EPIPGALRIISGSRAGLVIQMS--DRILVGR---GGDSNLPIEDDYASTHHAEFTQGIDG 118
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
W I+DL S NGT++N + P L D +++G TT+SV+
Sbjct: 119 AWFIEDLRSTNGTYVNGQRI--EEPTRLSIGDEVRIGR-TTMSVE 160
>gi|139438756|ref|ZP_01772240.1| Hypothetical protein COLAER_01243 [Collinsella aerofaciens ATCC
25986]
gi|133775836|gb|EBA39656.1| FHA domain protein [Collinsella aerofaciens ATCC 25986]
Length = 303
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+++ IGR +D+ ++D +S +H + W+I+DL+S NGT +N+ + T
Sbjct: 229 AQVTIGRERSVSDIALRDPNVSRRHAQLTFTGSDWSIEDLNSTNGTLVNNRRI---TRCP 285
Query: 86 LRENDTIKLGDCT 98
LR D + G T
Sbjct: 286 LRNGDLLTFGLST 298
>gi|41407555|ref|NP_960391.1| hypothetical protein MAP1457 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395908|gb|AAS03774.1| hypothetical protein MAP_1457 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 854
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F G+ + IGR +R D+ + IS HLI+ G+W
Sbjct: 4 MSPPATPALTVR--YDGAERTFAAGNDVVIGRDLRA-DLRVAHPLISRTHLIVRYEQGRW 60
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG ++N+ +P
Sbjct: 61 VAIDNGSLNGLYVNNRRVP 79
>gi|33242070|ref|NP_877011.1| forkhead domain-containing protein [Chlamydophila pneumoniae
TW-183]
gi|33236580|gb|AAP98668.1| Forkhead domain protein [Chlamydophila pneumoniae TW-183]
Length = 840
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
++LI+ GP SG + G IGR ND+ I+D + + II G + I +
Sbjct: 2 AVRLIVDEGPLSGVIFVLEDGISWSIGRDSSANDIPIEDPKLGASQAIINKTDGSYYITN 61
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
LD +N + T L+ DTI LG
Sbjct: 62 LDDTIPIVVNGVAIQETT--QLKNEDTILLG 90
>gi|417401782|gb|JAA47759.1| Putative e3 ubiquitin-protein ligase rnf8 [Desmodus rotundus]
Length = 487
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P +RE D ++LG
Sbjct: 59 ISRNHCVLKQNTEGQWTIMDNKSLNGVWLNRVRLQPLEVHSIREGDHVQLG 109
>gi|338718418|ref|XP_001500360.3| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Equus caballus]
Length = 518
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + +R+ D I+LG
Sbjct: 41 ISRNHCVLKQNAEGQWTIMDNKSLNGVWLNRERLEPLEVYSIRKGDHIQLG 91
>gi|333896373|ref|YP_004470247.1| FHA domain-containing protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333111638|gb|AEF16575.1| FHA domain containing protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 133
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ + + +SSKH +I K+ IQDL+S NGTF+N + L+ D IKLG+
Sbjct: 70 DIVVDNPYVSSKHAMIRKKGKKYIIQDLNSTNGTFVNGRRVK--NIVRLKNEDVIKLGN 126
>gi|268560806|ref|XP_002646295.1| Hypothetical protein CBG12001 [Caenorhabditis briggsae]
Length = 308
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT---- 61
+L +G + + + S IGR + D+ + S +H +++ S +T
Sbjct: 175 WRLYPFKGDEALQVLYVHRQSAYLIGRDHKIADIPVDHPSCSKQHAVLQFRSMPFTRDDG 234
Query: 62 ---------IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDE 112
I DL S NGTFLN + P +L+E D +K G T V M + +E
Sbjct: 235 TKARRIMPYIIDLGSGNGTFLNEQKIEPQRYIELKEKDMLKFGFSTREYVVMKEREITEE 294
Query: 113 SVA 115
+A
Sbjct: 295 ELA 297
>gi|373486131|ref|ZP_09576808.1| Forkhead-associated protein [Holophaga foetida DSM 6591]
gi|372012320|gb|EHP12894.1| Forkhead-associated protein [Holophaga foetida DSM 6591]
Length = 453
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 35 RGNDVTIK-DDG-ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTI 92
RG D ++ DDG +SS H + + G W +QDL S NGT++N ++E +
Sbjct: 26 RGPDNALRLDDGSVSSHHAVFRCLGGNWMLQDLGSTNGTWVNEE--------RVQERVWL 77
Query: 93 KLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTS 131
K GD + M +Q + P P R VP S
Sbjct: 78 KEGDRLRFGLVM----AQVGGLPAPFTAPLRPPPVPARS 112
>gi|289706954|ref|ZP_06503289.1| FHA domain protein [Micrococcus luteus SK58]
gi|289556279|gb|EFD49635.1| FHA domain protein [Micrococcus luteus SK58]
Length = 186
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
+V GP++G+TI + G + +GR + D+ + DD S +H + +W ++DL S N
Sbjct: 97 VVEGPKAGQTIALE-GRPLLMGR-AQDADLVLVDDYASGRHARLFPQGTRWFLEDLGSTN 154
Query: 70 GTFLNSTTLPPNTP 83
GT++N + P
Sbjct: 155 GTYVNGAPVTRALP 168
>gi|302388840|ref|YP_003824661.1| FHA domain-containing protein [Thermosediminibacter oceani DSM
16646]
gi|302199468|gb|ADL07038.1| FHA domain containing protein [Thermosediminibacter oceani DSM
16646]
Length = 144
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+D+ I D +SSKH +I + IQDL S NGTFLN + L+E D I +G
Sbjct: 68 SDIVINDPYLSSKHAMIFKKGRRMVIQDLKSTNGTFLNGKRIKKAVA--LKEKDVITMG 124
>gi|34809627|pdb|1MZK|A Chain A, Nmr Structure Of Kinase-Interacting Fha Domain Of Kinase
Associated Protein Phosphatase, Kapp In Arabidopsis
Length = 139
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLP-PN--- 81
+++GR V +D+ +KD +S KH + S KW + D+ S NGT +NS ++ P+
Sbjct: 34 VKLGR-VSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGS 92
Query: 82 ----TPFDLRENDTIKLGDCTTISVQMITMDSQDE 112
P +L +D I LG T + V+ + SQ+E
Sbjct: 93 RKWGNPVELASDDIITLGTTTKVYVR---ISSQNE 124
>gi|291396135|ref|XP_002714699.1| PREDICTED: ring finger protein 8 [Oryctolagus cuniculus]
Length = 555
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E + + G ++ +GR G VT + IS KH ++ ++ G+WTI D S NG
Sbjct: 26 EWLLLEDGREVSLGR---GFSVTYQLVSKVCPLMISRKHCVLKQNPEGQWTIMDNKSLNG 82
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + + + D I+LG
Sbjct: 83 VWLNRVRLEPLKFYAIHQGDHIQLG 107
>gi|410916747|ref|XP_003971848.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Takifugu
rubripes]
Length = 527
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTI 62
++R R+ + + F S+I +GR G DVT + IS H + G+WT+
Sbjct: 24 LMRVGRNSDWLRFYENSEITVGR---GLDVTYQLLSPSCPLMISRLHCTFRQRDDGQWTV 80
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D S NG ++N + +P L+ D+I+LG
Sbjct: 81 TDKKSLNGVWVNGSRIPAEEAHQLKLGDSIQLG 113
>gi|418423201|ref|ZP_12996370.1| hypothetical protein MBOL_49160 [Mycobacterium abscessus subsp.
bolletii BD]
gi|363993176|gb|EHM14402.1| hypothetical protein MBOL_49160 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 459
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 376 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 431
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 432 NNA---PVTEWQLADGDIIRLGHSEII 455
>gi|297807985|ref|XP_002871876.1| kapp [Arabidopsis lyrata subsp. lyrata]
gi|297317713|gb|EFH48135.1| kapp [Arabidopsis lyrata subsp. lyrata]
Length = 581
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSG--ETIEFKPGSK--IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGK 59
+ L ++ GP G + SK +++GR V +D+ +KD +S KH + S K
Sbjct: 182 LSLEVIAGPAIGLQHVVNSTSSSKLPVKLGR-VSPSDLALKDSEVSGKHAQITWNSTKLK 240
Query: 60 WTIQDLDSCNGTFLNSTTLPP--------NTPFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGT +NS ++ P +L +D I LG T + V++
Sbjct: 241 WELVDMGSLNGTLVNSQSVSHPDLGSRKWGNPVELASDDIITLGTTTKVYVRI 293
>gi|440896391|gb|ELR48324.1| E3 ubiquitin-protein ligase RNF8 [Bos grunniens mutus]
Length = 484
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E + + G+++ +GR G VT + IS H I+ ++ G+WTI+D S NG
Sbjct: 28 EWLLLEDGNEVTVGR---GFGVTYQLVSKICPLMISRNHCILKQNAEGQWTIKDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + + + D I+LG
Sbjct: 85 VWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|390934350|ref|YP_006391855.1| FHA domain-containing protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389569851|gb|AFK86256.1| FHA domain containing protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 133
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ + + +SSKH +I K+ IQDL+S NGTF+N + L+ D IKLG+
Sbjct: 70 DIVVDNPYVSSKHAMIRKKGKKYIIQDLNSTNGTFVNGRRVKNIAR--LKNEDVIKLGN 126
>gi|418251548|ref|ZP_12877679.1| hypothetical protein MAB47J26_21835 [Mycobacterium abscessus 47J26]
gi|353448705|gb|EHB97106.1| hypothetical protein MAB47J26_21835 [Mycobacterium abscessus 47J26]
Length = 494
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 411 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 466
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 467 NNA---PVTEWQLADGDIIRLGHSEII 490
>gi|256831425|ref|YP_003160152.1| FHA domain-containing protein [Jonesia denitrificans DSM 20603]
gi|256684956|gb|ACV07849.1| FHA domain containing protein [Jonesia denitrificans DSM 20603]
Length = 152
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP SG TI S I IGR + ++DD SS+H + S W ++DL
Sbjct: 60 RLVVTSGPLSGTTIPLG-SSAILIGR-SPSCTLVLEDDYSSSRHARVFPQSDAWFVEDLG 117
Query: 67 SCNGTFL 73
S NGTF+
Sbjct: 118 STNGTFM 124
>gi|304316128|ref|YP_003851273.1| FHA domain containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654304|ref|YP_007298012.1| FHA domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302777630|gb|ADL68189.1| FHA domain containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433292493|gb|AGB18315.1| FHA domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 133
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ +++ +SSKH +I K+ IQDL+S NGT++N + ++ ND IK G+
Sbjct: 70 DIVVENPYVSSKHAMIRKKGKKFVIQDLNSTNGTYVNGKRVKNIAR--IKNNDVIKFGN 126
>gi|119194923|ref|XP_001248065.1| hypothetical protein CIMG_01836 [Coccidioides immitis RS]
gi|392862692|gb|EAS36646.2| cytoplasm to vacuole targeting Vps64 [Coccidioides immitis RS]
Length = 750
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +RIGR V +G +S +H I GK I+D+ S NGT
Sbjct: 183 TVPYFP-ELLRIGRQTNAKTVPSPVNGYFDSKVLSRQHAEIWADRQGKIWIRDVKSSNGT 241
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 242 FVNGQRLSPENTDSVPHELREHDTLELG 269
>gi|429860376|gb|ELA35116.1| fha domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 315
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 2 EPPG---MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG 58
+PP KL + +G +TI+ S IGR D+ + IS +H +I+
Sbjct: 192 KPPAKDQWKLFVFKGNDIVDTIDLNLRSCWLIGREAAVVDMMAEHPSISKQHAVIQFRHV 251
Query: 59 -------------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
K + DL+S NGT LN + + ++LR+ D IKLG T V M+
Sbjct: 252 EKRNEFGDRIGKVKPYLIDLESANGTVLNGDKVADSRYYELRDKDMIKLGHSTREYVLML 311
Query: 106 T 106
Sbjct: 312 A 312
>gi|148675179|gb|EDL07126.1| mCG61177 [Mus musculus]
Length = 349
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESV-------------SGKWTIQDLDSCNGTF 72
S +GR R D+ I S +H +++ S K I DL S NGTF
Sbjct: 245 SAYLLGRHRRIADIPIDHPSCSKQHAVLQYRLVESTRADGTVGRSVKPFIIDLCSANGTF 304
Query: 73 LNSTTLPPNTPFDLRENDTIKLG 95
LN+ + P ++L+E+D +K G
Sbjct: 305 LNNKRIEPQRYYELKESDVLKFG 327
>gi|195433328|ref|XP_002064667.1| GK23714 [Drosophila willistoni]
gi|194160752|gb|EDW75653.1| GK23714 [Drosophila willistoni]
Length = 886
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 19 TIEFKPGSKIRIGRIV------RGNDVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNGT 71
TI +P + ++GR++ GN + +S H ++ S G + ++D S NGT
Sbjct: 189 TILLQPNQECKVGRLIAKSKASEGNAI-FDCKVLSRNHAMLWYTSDGHFYVKDTKSSNGT 247
Query: 72 FLNSTTLPPNTPFDLRENDTIKLG 95
F+N T L N P +L DT+K G
Sbjct: 248 FINDTKL-GNEPAELHYGDTVKFG 270
>gi|220910808|ref|YP_002486117.1| FHA domain-containing protein [Arthrobacter chlorophenolicus A6]
gi|219857686|gb|ACL38028.1| FHA domain containing protein [Arthrobacter chlorophenolicus A6]
Length = 160
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V GP G T+ S + +GR + + ++DD S +H + +W I+DL
Sbjct: 68 QLVVVEGPLKGTTLPLA-ASPVLLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 125
Query: 67 SCNGTFL 73
S NGT+L
Sbjct: 126 STNGTYL 132
>gi|154508353|ref|ZP_02043995.1| hypothetical protein ACTODO_00850 [Actinomyces odontolyticus ATCC
17982]
gi|153797987|gb|EDN80407.1| FHA domain protein [Actinomyces odontolyticus ATCC 17982]
Length = 167
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ ++D+ SS+H + S W I+DL S NGTF++ L NTP L+ D I++G T
Sbjct: 105 LVLEDEYASSRHAALTPQSDGWWIEDLSSRNGTFIDDERL--NTPRQLKIGDVIRIGQTT 162
>gi|114051113|ref|NP_001039681.1| E3 ubiquitin-protein ligase RNF8 [Bos taurus]
gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|87578372|gb|AAI13318.1| Ring finger protein 8 [Bos taurus]
gi|296474510|tpg|DAA16625.1| TPA: E3 ubiquitin-protein ligase RNF8 [Bos taurus]
Length = 487
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E + + G+++ +GR G VT + IS H I+ ++ G+WTI+D S NG
Sbjct: 28 EWLLLEDGNEVTVGR---GFGVTYQLVSKICPLMISRNHCILKQNAEGQWTIKDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + + + D I+LG
Sbjct: 85 VWLNRERLEPLKVYSIHKGDHIQLG 109
>gi|420934179|ref|ZP_15397452.1| hypothetical protein MM1S1510930_5022 [Mycobacterium massiliense
1S-151-0930]
gi|420935085|ref|ZP_15398355.1| hypothetical protein MM1S1520914_0240 [Mycobacterium massiliense
1S-152-0914]
gi|420944439|ref|ZP_15407694.1| hypothetical protein MM1S1530915_4572 [Mycobacterium massiliense
1S-153-0915]
gi|420949435|ref|ZP_15412684.1| hypothetical protein MM1S1540310_4577 [Mycobacterium massiliense
1S-154-0310]
gi|420954544|ref|ZP_15417786.1| hypothetical protein MM2B0626_4792 [Mycobacterium massiliense
2B-0626]
gi|420958718|ref|ZP_15421952.1| hypothetical protein MM2B0107_4132 [Mycobacterium massiliense
2B-0107]
gi|420964081|ref|ZP_15427305.1| hypothetical protein MM2B1231_4855 [Mycobacterium massiliense
2B-1231]
gi|420994651|ref|ZP_15457797.1| hypothetical protein MM2B0307_4082 [Mycobacterium massiliense
2B-0307]
gi|420995613|ref|ZP_15458756.1| hypothetical protein MM2B0912R_0241 [Mycobacterium massiliense
2B-0912-R]
gi|421004961|ref|ZP_15468083.1| hypothetical protein MM2B0912S_4796 [Mycobacterium massiliense
2B-0912-S]
gi|392132591|gb|EIU58336.1| hypothetical protein MM1S1510930_5022 [Mycobacterium massiliense
1S-151-0930]
gi|392146045|gb|EIU71769.1| hypothetical protein MM1S1530915_4572 [Mycobacterium massiliense
1S-153-0915]
gi|392146592|gb|EIU72313.1| hypothetical protein MM1S1520914_0240 [Mycobacterium massiliense
1S-152-0914]
gi|392150476|gb|EIU76189.1| hypothetical protein MM1S1540310_4577 [Mycobacterium massiliense
1S-154-0310]
gi|392153457|gb|EIU79164.1| hypothetical protein MM2B0626_4792 [Mycobacterium massiliense
2B-0626]
gi|392180753|gb|EIV06405.1| hypothetical protein MM2B0307_4082 [Mycobacterium massiliense
2B-0307]
gi|392191433|gb|EIV17058.1| hypothetical protein MM2B0912R_0241 [Mycobacterium massiliense
2B-0912-R]
gi|392193664|gb|EIV19288.1| hypothetical protein MM2B0912S_4796 [Mycobacterium massiliense
2B-0912-S]
gi|392246994|gb|EIV72471.1| hypothetical protein MM2B1231_4855 [Mycobacterium massiliense
2B-1231]
gi|392248444|gb|EIV73920.1| hypothetical protein MM2B0107_4132 [Mycobacterium massiliense
2B-0107]
Length = 459
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 376 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 431
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 432 NNA---PVTEWQLADGDIIRLGHSEII 455
>gi|430741218|ref|YP_007200347.1| FHA domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430012938|gb|AGA24652.1| FHA domain-containing protein [Singulisphaera acidiphila DSM 18658]
Length = 282
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 4 PGMKLIMVR--GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGK- 59
P M L+ V G +GE I + S + IGR V GN V D G+S +H I+ G+
Sbjct: 55 PPMALLHVLDDGDTTGEMIRIRSDSFL-IGR-VEGNLVIPHDSGMSGRHAEIVRRNDGRA 112
Query: 60 --WTIQDLDSCNGTFLNSTTL 78
W ++DL S NGTF+ ++T+
Sbjct: 113 WSWYLRDLGSTNGTFVRASTI 133
>gi|365872885|ref|ZP_09412421.1| hypothetical protein MMAS_48240 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|421052014|ref|ZP_15515008.1| hypothetical protein MMCCUG48898_5031 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363992951|gb|EHM14178.1| hypothetical protein MMAS_48240 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392240617|gb|EIV66110.1| hypothetical protein MMCCUG48898_5031 [Mycobacterium massiliense
CCUG 48898]
Length = 459
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 376 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 431
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 432 NNA---PVTEWQLADGDIIRLGHSEII 455
>gi|256004188|ref|ZP_05429171.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|385777964|ref|YP_005687129.1| FHA domain-containing protein [Clostridium thermocellum DSM 1313]
gi|419722000|ref|ZP_14249152.1| Forkhead-associated protein [Clostridium thermocellum AD2]
gi|419726975|ref|ZP_14253985.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|255991778|gb|EEU01877.1| FHA domain containing protein [Clostridium thermocellum DSM 2360]
gi|316939644|gb|ADU73678.1| FHA domain containing protein [Clostridium thermocellum DSM 1313]
gi|380769561|gb|EIC03471.1| Forkhead-associated protein [Clostridium thermocellum YS]
gi|380782039|gb|EIC11685.1| Forkhead-associated protein [Clostridium thermocellum AD2]
Length = 149
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ IKD IS H I + +G I+D+ S NGTF+N L L++ D IK+G+
Sbjct: 80 NDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGEEVPLKDGDNIKIGN 139
Query: 97 CTTISVQ 103
+ V
Sbjct: 140 VKFLFVS 146
>gi|312381158|gb|EFR26968.1| hypothetical protein AND_06601 [Anopheles darlingi]
Length = 1203
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIV-----RGNDVTIKDDGISSKHLIIESV 56
+P + +++ P S F PG++ ++GR V N+ +S H ++
Sbjct: 221 QPQHARALLICRPNSHP---FNPGAQAKVGRSVARIRVSENNAIFDCKVLSRNHAVLWYK 277
Query: 57 SGKWTIQDLDSCNGTFLN----STTLPPNTPFDLRENDTIKLG 95
G++ I+D S NGTF+N S T + P+++ D ++ G
Sbjct: 278 DGRFFIKDTGSSNGTFINNIRLSQTCTESEPYEISSGDIVQFG 320
>gi|443308340|ref|ZP_21038126.1| hypothetical protein W7U_21890 [Mycobacterium sp. H4Y]
gi|442763456|gb|ELR81455.1| hypothetical protein W7U_21890 [Mycobacterium sp. H4Y]
Length = 536
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 453 SGRTYQLRDGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 508
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 509 NNA---PVQEWQLADGDVIRLGHSEII 532
>gi|411117446|ref|ZP_11389933.1| FHA domain-containing protein [Oscillatoriales cyanobacterium
JSC-12]
gi|410713549|gb|EKQ71050.1| FHA domain-containing protein [Oscillatoriales cyanobacterium
JSC-12]
Length = 266
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 23 KPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK-WTIQDLDSCNGTFLNSTTLPPN 81
+P IGR R +++ D +S +H +I+ VS + + + DLDS NGT+LN +
Sbjct: 92 QPQQAWVIGR-DRQAGISVPDKRLSRRHALIQYVSNQGFYLIDLDSTNGTYLNGEAV--R 148
Query: 82 TPFDLRENDTIKLGDCTTISV---QMITMDS 109
P L++ D ++LG + I ++T+DS
Sbjct: 149 RPMLLKDGDRVRLGSLSFIFFACSNILTLDS 179
>gi|220909424|ref|YP_002484735.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
gi|219866035|gb|ACL46374.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Cyanothece sp. PCC 7425]
Length = 890
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I +S+ H I+ WTI DLDS NGTF+N + P L DTI++G
Sbjct: 133 NDMVIDHLTVSAFHARIDRQDNGWTITDLDSSNGTFINGEKIIGQRP--LHVGDTIQIG 189
>gi|414583612|ref|ZP_11440752.1| hypothetical protein MA5S1215_4390 [Mycobacterium abscessus
5S-1215]
gi|420879306|ref|ZP_15342673.1| hypothetical protein MA5S0304_4437 [Mycobacterium abscessus
5S-0304]
gi|420883979|ref|ZP_15347339.1| hypothetical protein MA5S0421_4671 [Mycobacterium abscessus
5S-0421]
gi|420887047|ref|ZP_15350405.1| hypothetical protein MA5S0422_0103 [Mycobacterium abscessus
5S-0422]
gi|420894896|ref|ZP_15358235.1| hypothetical protein MA5S0708_4362 [Mycobacterium abscessus
5S-0708]
gi|420903000|ref|ZP_15366331.1| hypothetical protein MA5S0817_3985 [Mycobacterium abscessus
5S-0817]
gi|420906973|ref|ZP_15370291.1| hypothetical protein MA5S1212_4119 [Mycobacterium abscessus
5S-1212]
gi|420974919|ref|ZP_15438109.1| hypothetical protein MA5S0921_5397 [Mycobacterium abscessus
5S-0921]
gi|392079742|gb|EIU05568.1| hypothetical protein MA5S0421_4671 [Mycobacterium abscessus
5S-0421]
gi|392084215|gb|EIU10040.1| hypothetical protein MA5S0304_4437 [Mycobacterium abscessus
5S-0304]
gi|392093761|gb|EIU19557.1| hypothetical protein MA5S0422_0103 [Mycobacterium abscessus
5S-0422]
gi|392094208|gb|EIU20003.1| hypothetical protein MA5S0708_4362 [Mycobacterium abscessus
5S-0708]
gi|392100361|gb|EIU26155.1| hypothetical protein MA5S0817_3985 [Mycobacterium abscessus
5S-0817]
gi|392104877|gb|EIU30663.1| hypothetical protein MA5S1212_4119 [Mycobacterium abscessus
5S-1212]
gi|392118764|gb|EIU44532.1| hypothetical protein MA5S1215_4390 [Mycobacterium abscessus
5S-1215]
gi|392160037|gb|EIU85730.1| hypothetical protein MA5S0921_5397 [Mycobacterium abscessus
5S-0921]
Length = 459
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 376 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 431
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 432 NNA---PVTEWQLADGDIIRLGHSEII 455
>gi|118367753|ref|XP_001017086.1| FHA domain containing protein [Tetrahymena thermophila]
gi|89298853|gb|EAR96841.1| FHA domain containing protein [Tetrahymena thermophila SB210]
Length = 470
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
G +S E K + +G + D+ +KD+ +S KH++IE+++G +I+DL S GTF
Sbjct: 204 GSQSVEKFAIKENQSVTLG--TKYCDIILKDNAVSRKHVLIENINGVCSIRDLGSSCGTF 261
Query: 73 L 73
+
Sbjct: 262 I 262
>gi|408829883|ref|ZP_11214773.1| ABC transporter ATP-binding protein [Streptomyces somaliensis DSM
40738]
Length = 782
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
+G + +P R+GR +D+ + DD +S H + + G+WT++D S NGT+
Sbjct: 18 AGHSTVLRPSRVYRVGRD-PASDIPLADDRVSWHHAVFRAEDGRWTVRDEGSTNGTY 73
>gi|365826985|ref|ZP_09368864.1| hypothetical protein HMPREF0975_00647 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365265546|gb|EHM95304.1| hypothetical protein HMPREF0975_00647 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 158
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|329944783|ref|ZP_08292862.1| FHA domain protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328529919|gb|EGF56809.1| FHA domain protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 158
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|303310859|ref|XP_003065441.1| FHA domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105103|gb|EER23296.1| FHA domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 750
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +RIGR V +G +S +H I GK I+D+ S NGT
Sbjct: 183 TVPYFP-ELLRIGRQTNAKTVPSPVNGYFDSKVLSRQHAEIWADRQGKIWIRDVKSSNGT 241
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 242 FVNGQRLSPENTDSVPHELREHDTLELG 269
>gi|108762591|ref|YP_632168.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108466471|gb|ABF91656.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 180
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 8 LIMVRGPRSGETIEFKP---GSKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTI 62
L M+R + E +P G ++ +GR D+ + D +S H + + G +++
Sbjct: 64 LAMLRDFDNLEVHFLQPSVDGEELTVGR-TEACDLVVPDPSVSQHHATMRWSAARGGFSV 122
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
+D +S NGTF+N L L + DT+ GD + ++ T+ + +A PK+
Sbjct: 123 RDAESMNGTFINGAPLGYRAQVLLHDGDTLAFGDAQFLYLRAETV-YEHLRLASPKK 178
>gi|326772889|ref|ZP_08232173.1| FHA domain-containing protein [Actinomyces viscosus C505]
gi|343523163|ref|ZP_08760125.1| FHA domain protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|326637521|gb|EGE38423.1| FHA domain-containing protein [Actinomyces viscosus C505]
gi|343400319|gb|EGV12837.1| FHA domain protein [Actinomyces sp. oral taxon 175 str. F0384]
Length = 158
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|320034677|gb|EFW16620.1| cytoplasm to vacuole targeting protein Vps64 [Coccidioides
posadasii str. Silveira]
Length = 750
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +RIGR V +G +S +H I GK I+D+ S NGT
Sbjct: 183 TVPYFP-ELLRIGRQTNAKTVPSPVNGYFDSKVLSRQHAEIWADRQGKIWIRDVKSSNGT 241
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 242 FVNGQRLSPENTDSVPHELREHDTLELG 269
>gi|212529880|ref|XP_002145097.1| FHA domain protein [Talaromyces marneffei ATCC 18224]
gi|210074495|gb|EEA28582.1| FHA domain protein [Talaromyces marneffei ATCC 18224]
Length = 571
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 25/102 (24%)
Query: 19 TIEFKPGSK--------IRIGRIVRGNDVTI-------------KDDGISSKHLIIESVS 57
+++F P ++ IR+GR + V I K +S KH V
Sbjct: 203 SLQFSPMTRTLPSEDCVIRVGRYSERDGVPIANPTEPSDAPIGFKSKVVSRKHCEFSMVD 262
Query: 58 GKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKLG 95
G+W I+D+ S +GTFLN T L PN + +R+ D ++LG
Sbjct: 263 GQWHIKDVGSSSGTFLNRTRLSQPNMASRLYAVRDGDIVQLG 304
>gi|338533809|ref|YP_004667143.1| Pkn9 associate protein 1 [Myxococcus fulvus HW-1]
gi|337259905|gb|AEI66065.1| Pkn9 associate protein 1 [Myxococcus fulvus HW-1]
Length = 484
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + RGP +G+ + K G+ + IGR +D+ ++ IS +H + ++ ++DL S
Sbjct: 68 LYVERGPGAGQLVPVKQGALV-IGR-SSSSDLRLQHPSISRRHAHLTRRGDRFFLKDLSS 125
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
NGTFLN + +L D + LG+
Sbjct: 126 QNGTFLNRHRI--AAEVELMPGDEVSLGNA 153
>gi|242785594|ref|XP_002480627.1| cytoplasm to vacuole targeting Vps64, putative [Talaromyces
stipitatus ATCC 10500]
gi|218720774|gb|EED20193.1| cytoplasm to vacuole targeting Vps64, putative [Talaromyces
stipitatus ATCC 10500]
Length = 741
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +RIGR + +G +S +H I GK I+D+ S NGT
Sbjct: 184 TVPYMP-EVLRIGRQTNAKTIPTPVNGYFDSKVLSRQHAEIWADRRGKIWIRDIKSSNGT 242
Query: 72 FLNSTTLPPNT----PFDLRENDTIKLG 95
F+N L P + P +LREND + LG
Sbjct: 243 FVNGQRLSPESRESEPHELRENDALDLG 270
>gi|452986002|gb|EME85758.1| hypothetical protein MYCFIDRAFT_40934, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 246
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 24 PGSKIRIGRI-----VRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78
P S +R+GR G+ V K +S +H G+W ++D+ S +GTFLN L
Sbjct: 47 PNSVVRVGRYSERDNASGDVVGFKSKVVSRRHCEFWCNEGQWYVKDVKSSSGTFLNHVRL 106
Query: 79 PP----NTPFDLRENDTIKLG 95
+ P+ + + D ++LG
Sbjct: 107 SSPGAESRPYPVNDGDVVQLG 127
>gi|420866488|ref|ZP_15329877.1| hypothetical protein MA4S0303_4860 [Mycobacterium abscessus
4S-0303]
gi|420871279|ref|ZP_15334661.1| hypothetical protein MA4S0726RA_4795 [Mycobacterium abscessus
4S-0726-RA]
gi|420875729|ref|ZP_15339105.1| hypothetical protein MA4S0726RB_4392 [Mycobacterium abscessus
4S-0726-RB]
gi|420987333|ref|ZP_15450489.1| hypothetical protein MA4S0206_4865 [Mycobacterium abscessus
4S-0206]
gi|421041441|ref|ZP_15504449.1| hypothetical protein MA4S0116R_4814 [Mycobacterium abscessus
4S-0116-R]
gi|421046078|ref|ZP_15509078.1| hypothetical protein MA4S0116S_3935 [Mycobacterium abscessus
4S-0116-S]
gi|392065204|gb|EIT91053.1| hypothetical protein MA4S0303_4860 [Mycobacterium abscessus
4S-0303]
gi|392067204|gb|EIT93052.1| hypothetical protein MA4S0726RB_4392 [Mycobacterium abscessus
4S-0726-RB]
gi|392070749|gb|EIT96596.1| hypothetical protein MA4S0726RA_4795 [Mycobacterium abscessus
4S-0726-RA]
gi|392181612|gb|EIV07263.1| hypothetical protein MA4S0206_4865 [Mycobacterium abscessus
4S-0206]
gi|392222369|gb|EIV47892.1| hypothetical protein MA4S0116R_4814 [Mycobacterium abscessus
4S-0116-R]
gi|392235531|gb|EIV61029.1| hypothetical protein MA4S0116S_3935 [Mycobacterium abscessus
4S-0116-S]
Length = 452
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 369 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 424
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 425 NNA---PVTEWQLADGDIIRLGHSEII 448
>gi|227549472|ref|ZP_03979521.1| FHA domain protein [Corynebacterium lipophiloflavum DSM 44291]
gi|227078471|gb|EEI16434.1| FHA domain protein [Corynebacterium lipophiloflavum DSM 44291]
Length = 148
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++V GP G +E + +GR +D + DD SS H + +W I+DLDS
Sbjct: 56 LVVVEGPLKGSHMEIASVEDLTLGR-ANSSDFVLGDDFASSTHARLFRRGSEWFIEDLDS 114
Query: 68 CNGTFL 73
NGTF+
Sbjct: 115 RNGTFV 120
>gi|169627146|ref|YP_001700795.1| hypothetical protein MAB_0039c [Mycobacterium abscessus ATCC 19977]
gi|419710447|ref|ZP_14237913.1| hypothetical protein OUW_12944 [Mycobacterium abscessus M93]
gi|420912673|ref|ZP_15375985.1| hypothetical protein MA6G0125R_4202 [Mycobacterium abscessus
6G-0125-R]
gi|420919128|ref|ZP_15382431.1| hypothetical protein MA6G0125S_5244 [Mycobacterium abscessus
6G-0125-S]
gi|420924298|ref|ZP_15387594.1| hypothetical protein MA6G0728S_4934 [Mycobacterium abscessus
6G-0728-S]
gi|420929958|ref|ZP_15393237.1| hypothetical protein MA6G1108_5173 [Mycobacterium abscessus
6G-1108]
gi|420969652|ref|ZP_15432855.1| hypothetical protein MM3A0810R_5420 [Mycobacterium abscessus
3A-0810-R]
gi|420980296|ref|ZP_15443473.1| hypothetical protein MA6G0212_5231 [Mycobacterium abscessus
6G-0212]
gi|420985681|ref|ZP_15448848.1| hypothetical protein MA6G0728R_5175 [Mycobacterium abscessus
6G-0728-R]
gi|421009766|ref|ZP_15472875.1| hypothetical protein MA3A0119R_5332 [Mycobacterium abscessus
3A-0119-R]
gi|421010510|ref|ZP_15473614.1| hypothetical protein MA3A0122R_0069 [Mycobacterium abscessus
3A-0122-R]
gi|421020944|ref|ZP_15484000.1| hypothetical protein MA3A0122S_5191 [Mycobacterium abscessus
3A-0122-S]
gi|421026217|ref|ZP_15489260.1| hypothetical protein MA3A0731_5417 [Mycobacterium abscessus
3A-0731]
gi|421031468|ref|ZP_15494498.1| hypothetical protein MA3A0930R_5352 [Mycobacterium abscessus
3A-0930-R]
gi|421036136|ref|ZP_15499153.1| hypothetical protein MA3A0930S_5287 [Mycobacterium abscessus
3A-0930-S]
gi|169239113|emb|CAM60141.1| Conserved hypothetical protein [Mycobacterium abscessus]
gi|382941279|gb|EIC65599.1| hypothetical protein OUW_12944 [Mycobacterium abscessus M93]
gi|392112019|gb|EIU37789.1| hypothetical protein MA6G0125S_5244 [Mycobacterium abscessus
6G-0125-S]
gi|392114667|gb|EIU40436.1| hypothetical protein MA6G0125R_4202 [Mycobacterium abscessus
6G-0125-R]
gi|392126946|gb|EIU52697.1| hypothetical protein MA6G1108_5173 [Mycobacterium abscessus
6G-1108]
gi|392128951|gb|EIU54701.1| hypothetical protein MA6G0728S_4934 [Mycobacterium abscessus
6G-0728-S]
gi|392164574|gb|EIU90263.1| hypothetical protein MA6G0212_5231 [Mycobacterium abscessus
6G-0212]
gi|392170677|gb|EIU96355.1| hypothetical protein MA6G0728R_5175 [Mycobacterium abscessus
6G-0728-R]
gi|392195372|gb|EIV20991.1| hypothetical protein MA3A0119R_5332 [Mycobacterium abscessus
3A-0119-R]
gi|392206667|gb|EIV32250.1| hypothetical protein MA3A0122S_5191 [Mycobacterium abscessus
3A-0122-S]
gi|392209740|gb|EIV35312.1| hypothetical protein MA3A0731_5417 [Mycobacterium abscessus
3A-0731]
gi|392216621|gb|EIV42164.1| hypothetical protein MA3A0122R_0069 [Mycobacterium abscessus
3A-0122-R]
gi|392219350|gb|EIV44875.1| hypothetical protein MA3A0930R_5352 [Mycobacterium abscessus
3A-0930-R]
gi|392219988|gb|EIV45512.1| hypothetical protein MA3A0930S_5287 [Mycobacterium abscessus
3A-0930-S]
gi|392245308|gb|EIV70786.1| hypothetical protein MM3A0810R_5420 [Mycobacterium abscessus
3A-0810-R]
Length = 452
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 369 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 424
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 425 NNA---PVTEWQLADGDIIRLGHSEII 448
>gi|41406121|ref|NP_958957.1| hypothetical protein MAP0023c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|440775372|ref|ZP_20954249.1| hypothetical protein D522_00189 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41394469|gb|AAS02340.1| hypothetical protein MAP_0023c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|436724619|gb|ELP48300.1| hypothetical protein D522_00189 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 544
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 461 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 516
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 517 NNA---PVQEWQLADGDVIRLGHSEII 540
>gi|320532858|ref|ZP_08033631.1| FHA domain protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320134933|gb|EFW27108.1| FHA domain protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 158
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|357492513|ref|XP_003616545.1| FHA domain-containing protein DDL [Medicago truncatula]
gi|355517880|gb|AES99503.1| FHA domain-containing protein DDL [Medicago truncatula]
Length = 156
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
GR R D+ S +H +I+ + I DL S N TF+N + + P ++LRE
Sbjct: 78 FGRERRVADIPTDHPSCSKQHAVIQ---FRPYIMDLGSTNKTFVNDSPIEPQRYYELREQ 134
Query: 90 DTIKLGDCT 98
DTI+ G+ +
Sbjct: 135 DTIEFGNSS 143
>gi|121533697|ref|ZP_01665524.1| FHA domain containing protein [Thermosinus carboxydivorans Nor1]
gi|121307688|gb|EAX48603.1| FHA domain containing protein [Thermosinus carboxydivorans Nor1]
Length = 151
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F+ IGR ND+ I + +S +H I ++ + DL+S NGTF+N +
Sbjct: 73 FELAETTSIGR-SDANDIVINEAYVSHEHACISFYKQQYWLADLNSTNGTFVNGQRITGE 131
Query: 82 TPFDLRENDTIKLGDCT 98
P LR D IK+G +
Sbjct: 132 VP--LRSGDIIKIGSVS 146
>gi|421744705|ref|ZP_16182661.1| FHA domain-containing protein, partial [Streptomyces sp. SM8]
gi|406686878|gb|EKC90943.1| FHA domain-containing protein, partial [Streptomyces sp. SM8]
Length = 174
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L + D + +G
Sbjct: 105 VPPEDPGVSHQHAMLVQQPDGGWAVVDQNSTNGTTVNGGEDPIQPYVPVPLSDGDRVHVG 164
Query: 96 DCTTISV 102
TTI++
Sbjct: 165 AWTTITL 171
>gi|83314611|ref|XP_730435.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490157|gb|EAA22000.1| Drosophila melanogaster RE68879p, putative [Plasmodium yoelii
yoelii]
Length = 490
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQ----DLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
D+ +++ IS +H +I+ + I DL+S NG++LN+ + PN ++LRE D ++
Sbjct: 410 DIILRNMSISKQHAVIQFKKHENKILPFLIDLNSTNGSYLNNEKIDPNKFYELRETDLLR 469
Query: 94 LG 95
G
Sbjct: 470 FG 471
>gi|118463460|ref|YP_882330.1| ABC transporter ATP-binding protein [Mycobacterium avium 104]
gi|118164747|gb|ABK65644.1| ABC transporter, ATP-binding protein [Mycobacterium avium 104]
Length = 840
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+GR V+ DV I D IS HLI+ G+W D S NGT+LN +P D+ +
Sbjct: 3 VGRHVQA-DVRIPDPRISRAHLILRFEQGRWLAIDNGSLNGTYLNGYRMP---VVDIHDG 58
Query: 90 DTIKLGD 96
+I +G+
Sbjct: 59 QSIHVGN 65
>gi|449665669|ref|XP_002154689.2| PREDICTED: sarcolemmal membrane-associated protein-like [Hydra
magnipapillata]
Length = 581
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 28 IRIGRIV-----RGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP--- 79
++IGR V N+ +S H I+ +GK+ +QD S NGT++NS L
Sbjct: 26 VKIGRAVAKTKPSSNNAVFDCKVLSRNHAIMWYENGKFLLQDTKSSNGTYVNSVRLSRGS 85
Query: 80 -PNTPFDLRENDTIKLG 95
+ P++++ ND ++ G
Sbjct: 86 EESEPYEIKSNDILQFG 102
>gi|427405966|ref|ZP_18896171.1| hypothetical protein HMPREF9161_00531 [Selenomonas sp. F0473]
gi|425708807|gb|EKU71846.1| hypothetical protein HMPREF9161_00531 [Selenomonas sp. F0473]
Length = 150
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 16 SGETIE---FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
+G+ IE F G ++ IGR NDV + D +S H++I ++ +DL S N T+
Sbjct: 63 AGDGIEGRRFAIGRELSIGR-SEDNDVVLPDQFVSHHHVLIYRRENQYVAEDLGSRNHTY 121
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCT 98
LN L T L D +++G +
Sbjct: 122 LNDNILTGRTY--LHAGDVLRIGAVS 145
>gi|417746390|ref|ZP_12394898.1| FHA domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336462097|gb|EGO40939.1| FHA domain-containing protein [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 511
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 428 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 483
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 484 NNA---PVQEWQLADGDVIRLGHSEII 507
>gi|372489483|ref|YP_005029048.1| FHA domain-containing protein [Dechlorosoma suillum PS]
gi|359356036|gb|AEV27207.1| FHA domain-containing protein [Dechlorosoma suillum PS]
Length = 296
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 11 VRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNG 70
+ GP G+ EF G + +GR V + V I D +S++H + + GK ++D S NG
Sbjct: 203 IAGPLQGQ--EFPVGQGLMLGRSVEAS-VVIGDPHVSNRHAWVGPIGGKLLLRDNQSTNG 259
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLGD 96
TF N L+E D + LGD
Sbjct: 260 TFHNGNMAQRVGEVTLQEGDVVILGD 285
>gi|195113813|ref|XP_002001462.1| GI10806 [Drosophila mojavensis]
gi|193918056|gb|EDW16923.1| GI10806 [Drosophila mojavensis]
Length = 695
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 15 RSGETI----EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-------------SVS 57
+SG+ I + + + GR+ NDV + IS H +++ +
Sbjct: 60 KSGQIIDEVKQLQQQAYWTFGRLP-DNDVAMAHPTISRYHAVLQYKPKAGDGEDEEAAQP 118
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
W I DL S +GTFLN +PP +R +K+G T + +
Sbjct: 119 DGWYIYDLGSTHGTFLNKQRVPPRVYIRIRVGHMLKMGSSTRVYI 163
>gi|145225458|ref|YP_001136136.1| ABC transporter-like protein [Mycobacterium gilvum PYR-GCK]
gi|315445811|ref|YP_004078690.1| ABC-type multidrug transporter, ATPase component [Mycobacterium
gilvum Spyr1]
gi|145217944|gb|ABP47348.1| ABC transporter related protein [Mycobacterium gilvum PYR-GCK]
gi|315264114|gb|ADU00856.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium gilvum Spyr1]
Length = 869
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PG + VR G T F G+ + +GR +R DV I IS HL++ G+W
Sbjct: 1 MSRPGSPALTVR--YDGSTHTFAAGNDVVVGRDLRA-DVRIAHPLISRAHLVLRFDQGRW 57
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D S NG ++N +P D+ + + +G+
Sbjct: 58 IAIDNGSLNGMYVNGRRVPAA---DISDGGQLHIGN 90
>gi|426251057|ref|XP_004019248.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Ovis aries]
Length = 603
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H I+ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 175 ISRNHCILKQNAEGQWTIMDNKSLNGVWLNKKRLEPLKVYSIHKGDHIQLG 225
>gi|400534739|ref|ZP_10798277.1| ABC transporter ATP-binding protein [Mycobacterium colombiense
CECT 3035]
gi|400333041|gb|EJO90536.1| ABC transporter ATP-binding protein [Mycobacterium colombiense
CECT 3035]
Length = 891
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F PG+ + IGR +R D+ + IS HLI+ G+W
Sbjct: 4 MTPPAPPALTVR--YEGAERTFAPGNDVVIGRDLRA-DMRVAHPLISRNHLIVRYDQGRW 60
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG ++++ +P
Sbjct: 61 IAIDNGSLNGLYVHNRRVP 79
>gi|379759459|ref|YP_005345856.1| hypothetical protein OCQ_00220 [Mycobacterium intracellulare
MOTT-64]
gi|378807401|gb|AFC51535.1| hypothetical protein OCQ_00220 [Mycobacterium intracellulare
MOTT-64]
Length = 542
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 459 SGRTYQLRDGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 514
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 515 NNA---PVQEWQLADGDVIRLGHSEII 538
>gi|268608073|ref|ZP_06141802.1| FHA domain-containing protein [Ruminococcus flavefaciens FD-1]
Length = 1568
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIK--- 93
N ++I +S H +I +G WT+ D++S NGTF+N+ + T +LR DT+
Sbjct: 119 NIISINSRYVSGNHAVISRKNGVWTVNDMESKNGTFVNNRRI---TSSELRAGDTVSILG 175
Query: 94 ----LGDC 97
+GDC
Sbjct: 176 YKFIIGDC 183
>gi|389861766|ref|YP_006364005.1| hypothetical protein MODMU_0028 [Modestobacter marinus]
gi|388483968|emb|CCH85500.1| Conserved protein of unknown function; putative FHA domain
[Modestobacter marinus]
Length = 153
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
L++ GP SG I I IGR + + + DD SS+H + + G+W ++DL
Sbjct: 61 HLVVTAGPLSGTRITLGE-QAILIGR-ADDSTLVLTDDFASSRHARLTNRGGQWYVEDLG 118
Query: 67 SCNGTFLN 74
S NGT+L+
Sbjct: 119 STNGTYLD 126
>gi|419714388|ref|ZP_14241805.1| hypothetical protein S7W_08007 [Mycobacterium abscessus M94]
gi|382945667|gb|EIC69960.1| hypothetical protein S7W_08007 [Mycobacterium abscessus M94]
Length = 397
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G+ + I RG D + D G+S +HL + + DL+S NGT +
Sbjct: 314 SGRTYQLREGTNV----IGRGQDAQFRLPDTGVSRRHLEVRFDGHAALLSDLNSTNGTTV 369
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P T + L + D I+LG I
Sbjct: 370 NNA---PVTEWQLADGDIIRLGHSEII 393
>gi|321461060|gb|EFX72095.1| hypothetical protein DAPPUDRAFT_326474 [Daphnia pulex]
Length = 668
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+++ IGR + N +I D +S KH + + +WTI+++ NG +N +P +
Sbjct: 34 NEVSIGR-SKENTYSIADLLVSRKHAVFRLIKDQWTIENV-GMNGVAVNHVAVPKHQQIP 91
Query: 86 LRENDTIKLG----DCTTISVQMITMDSQDESVAKPKRNPRRQANVPG 129
+ D I+ G VQ + + +E VAK R P N P
Sbjct: 92 IHNMDIIEFGAGSKYVYAFRVQSDSPEVGEEPVAKKMRLPLANRNYPS 139
>gi|410634925|ref|ZP_11345550.1| hypothetical protein GLIP_0100 [Glaciecola lipolytica E3]
gi|410145499|dbj|GAC12755.1| hypothetical protein GLIP_0100 [Glaciecola lipolytica E3]
Length = 512
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR D + + IS KHL++ K ++D+ S NG++LN L P P +L
Sbjct: 438 IGRESAQVDYVLGESEISRKHLMLRLHEDKVYVEDMGSQNGSWLNEVQLNPGQPMELSNG 497
Query: 90 DTIKLGDCT-TISV 102
T++L T T++V
Sbjct: 498 MTLRLSTITFTVNV 511
>gi|400596280|gb|EJP64056.1| RING finger protein [Beauveria bassiana ARSEF 2860]
Length = 836
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 19/87 (21%)
Query: 28 IRIGRI----------VRGN-----DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
IR+GR V GN +V K +S +H +GKW I+D+ S +GTF
Sbjct: 502 IRVGRFSERDAHPLASVSGNQPSAANVGFKSKVVSRRHCEFWHENGKWYIKDVKSSSGTF 561
Query: 73 LNSTTLPPNT----PFDLRENDTIKLG 95
LN L P + F + + D ++LG
Sbjct: 562 LNHIRLSPPSQESKAFAVNDGDIVQLG 588
>gi|379744742|ref|YP_005335563.1| hypothetical protein OCU_00220 [Mycobacterium intracellulare ATCC
13950]
gi|379752035|ref|YP_005340707.1| hypothetical protein OCO_00220 [Mycobacterium intracellulare
MOTT-02]
gi|378797106|gb|AFC41242.1| hypothetical protein OCU_00220 [Mycobacterium intracellulare ATCC
13950]
gi|378802251|gb|AFC46386.1| hypothetical protein OCO_00220 [Mycobacterium intracellulare
MOTT-02]
Length = 542
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 459 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 514
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 515 NNA---PVQEWQLADGDVIRLGHSEII 538
>gi|341895316|gb|EGT51251.1| hypothetical protein CAEBREN_22483 [Caenorhabditis brenneri]
Length = 318
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT---- 61
+L +G + + + S IGR + D+ + S +H +++ S +T
Sbjct: 184 WRLYPFKGDEALQVLYIHRQSAYLIGRDHKIADIPVDHPSCSKQHAVLQFRSMPFTRDDG 243
Query: 62 ---------IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
I DL S NGTFLN + P +L+E D +K G T V M
Sbjct: 244 TKARRIMPYIIDLGSGNGTFLNEEKIEPQRYIELKEKDMLKFGFSTREYVVM 295
>gi|325066360|ref|ZP_08125033.1| fha domain containing protein [Actinomyces oris K20]
Length = 158
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|320105065|ref|YP_004180656.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
gi|319752347|gb|ADV64107.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
Length = 300
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-IQDL 65
L+++ G G + K G IGR + +++ + + +S +H ++E + T + DL
Sbjct: 20 YLMLIEGGIPGMLLPLKLGGNT-IGRSME-SEIQLLERTVSRRHALLEVWDDQPTRLTDL 77
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT-------MDSQDESVAKPK 118
+S NGTF+N LP P L E I+ G M+T D D S+ P
Sbjct: 78 NSVNGTFVNGERLPQGMPTSLAEGSKIRFGTLVVTQFLMLTKAQEQRRRDLFDRSIRDP- 136
Query: 119 RNPRRQANVPGTSSVRATSGRKKAEAEPVETLGL 152
+P + GR KAEA LGL
Sbjct: 137 -----LTELPTLAYFLDQVGR-KAEANRKANLGL 164
>gi|118465219|ref|YP_879325.1| hypothetical protein MAV_0024 [Mycobacterium avium 104]
gi|118166506|gb|ABK67403.1| xyppx repeat family protein [Mycobacterium avium 104]
Length = 545
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 462 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 517
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 518 NNA---PVQEWQLADGDVIRLGHSEII 541
>gi|387873432|ref|YP_006303736.1| hypothetical protein W7S_00110 [Mycobacterium sp. MOTT36Y]
gi|386786890|gb|AFJ33009.1| hypothetical protein W7S_00110 [Mycobacterium sp. MOTT36Y]
Length = 542
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 459 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 514
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 515 NNA---PVQEWQLADGDVIRLGHSEII 538
>gi|148655915|ref|YP_001276120.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148568025|gb|ABQ90170.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 154
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 4 PGMKLIMVRGPRSGETI--EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
P L+++R +SG + F IGR + ++ + D +S +H +E +W
Sbjct: 54 PYGHLVVLRSGQSGVAVGKMFPLSPSTIIGRSMEHCEIALNDSFLSQQHARLELRGNQWV 113
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++DL+S NGTF+N + T + E D I++G
Sbjct: 114 LEDLNSTNGTFVNDIEVRDATV--VEEGDIIRVG 145
>gi|379733590|ref|YP_005327095.1| hypothetical protein BLASA_0041 [Blastococcus saxobsidens DD2]
gi|378781396|emb|CCG01046.1| Conserved protein of unknown function; putative FHA domain
[Blastococcus saxobsidens DD2]
Length = 154
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ GP SG I I IGR + + + DD SS+H + + G+W ++DL S
Sbjct: 63 LVVTAGPLSGTKITLG-DQPILIGR-ADDSTLVLTDDFASSRHARLTNRGGQWYVEDLGS 120
Query: 68 CNGTFLN 74
NGT+L+
Sbjct: 121 TNGTYLD 127
>gi|254775457|ref|ZP_05216973.1| ABC transporter, ATP-binding protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 872
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F G+ + IGR +R D+ + IS HLI+ G+W
Sbjct: 1 MSPPATPALTVR--YDGAERTFAAGNDVVIGRDLRA-DLRVAHPLISRTHLIVRYEQGRW 57
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG ++N+ +P
Sbjct: 58 VAIDNGSLNGLYVNNRRVP 76
>gi|170089145|ref|XP_001875795.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649055|gb|EDR13297.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 299
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 20/123 (16%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP G +L + RG E + S IGR D+ I S +H +I+
Sbjct: 172 EPPEARKPVLGWRLYVFRGSEQLELLHIHRQSAYLIGRDRLVADIAIDHPSCSKQHAVIQ 231
Query: 55 SVSG-------------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTIS 101
K + DL+S NGT +N +P ++L+ D IK G T
Sbjct: 232 YRYVREKDEFGDSKGIVKPFVIDLESTNGTHVNDEAIPAARYYELKAGDVIKFGQSTREY 291
Query: 102 VQM 104
V +
Sbjct: 292 VLL 294
>gi|157103376|ref|XP_001647951.1| tropomyosin, putative [Aedes aegypti]
gi|108884174|gb|EAT48399.1| AAEL000553-PA [Aedes aegypti]
Length = 448
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVT----IKDDGISSK-HLIIESVSGKWTIQDLDSCNGTFL 73
T+ +P ++++GR V N V+ I D + S+ H ++ GK+ I+D S NGTF+
Sbjct: 24 TLFLEPHQEVKVGRSVARNRVSENNAIFDCKVLSRNHAVLWYSDGKFYIKDTGSSNGTFI 83
Query: 74 NSTTLPPNT----PFDLRENDTIKLG 95
N+ L + P+++ D ++ G
Sbjct: 84 NNVRLSQTSTESEPYEVSSGDIVQFG 109
>gi|359423029|ref|ZP_09214174.1| hypothetical protein GOAMR_04_00740 [Gordonia amarae NBRC 15530]
gi|358241712|dbj|GAB03756.1| hypothetical protein GOAMR_04_00740 [Gordonia amarae NBRC 15530]
Length = 409
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 18 ETIEFKPGSKIR-IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNST 76
ETI G R IGR ND+ + D S H + V ++DL S NGTF+N +
Sbjct: 122 ETITVSVGGPARTIGR-TPDNDIVVNDVLASRHHARLSQVGEGLVLEDLHSVNGTFVNGS 180
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVA 115
+ LREND + +G+ + + + Q+ESV
Sbjct: 181 RISRAV---LRENDVVTIGNSDFVVSRGNLLRGQEESVV 216
>gi|449504545|ref|XP_002200362.2| PREDICTED: protein KIAA0284 homolog [Taeniopygia guttata]
Length = 1625
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 25 GSKIRIGR--IVRGND---VTIKDDGISSKHLIIESVSGK---WTIQDLDSCNGTFLNST 76
G + R+ R I G D + ++ + +H +I K W ++DL S NGTF+N
Sbjct: 13 GIRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDKEKDEHW-VKDLGSLNGTFVNDV 71
Query: 77 TLPPNTPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRA 135
+P L+ ND I+ G D ++ I +E++ K + Q N GT+ RA
Sbjct: 72 RIPDQKYITLKLNDVIRFGYDSNMYVLEQIQHKVPEEALKHEKYTSQLQMNYKGTAMKRA 131
>gi|341876651|gb|EGT32586.1| hypothetical protein CAEBREN_23825 [Caenorhabditis brenneri]
Length = 308
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 13/112 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT---- 61
+L +G + + + S IGR + D+ + S +H +++ S +T
Sbjct: 174 WRLYPFKGDEALQVLYIHRQSAYLIGRDHKIADIPVDHPSCSKQHAVLQFRSMPFTRDDG 233
Query: 62 ---------IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
I DL S NGTFLN + P +L+E D +K G T V M
Sbjct: 234 TKARRIMPYIIDLGSGNGTFLNEEKIEPQRYIELKEKDMLKFGFSTREYVVM 285
>gi|392411405|ref|YP_006448012.1| FHA domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390624541|gb|AFM25748.1| FHA domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 253
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 37 NDVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NDV I + +S H IIE + + DL+S NGTF+N + FD NDT+ +G
Sbjct: 31 NDVVIDNMAVSGHHAIIEEEDPNYYVLADLESLNGTFVNEKKIAREKIFD---NDTLIVG 87
Query: 96 DCTTISVQMITMDSQDESVAKPKRNPRRQANV 127
+ I + QDE P R+A V
Sbjct: 88 KHI---LSFIDLRPQDE-------RPSREAEV 109
>gi|328703332|ref|XP_003242172.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-B-like [Acyrthosiphon
pisum]
Length = 321
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
+V+ R+GE + K + G ++ + + I++ IS H I + K+ ++D+DSC
Sbjct: 16 LVQDTRTGEVYDVKADCQFVFGNFLKSS-IVIEELYISGIHSTIRYENDKFILKDIDSCT 74
Query: 70 GTFLN 74
GT+LN
Sbjct: 75 GTYLN 79
>gi|299743514|ref|XP_001835826.2| smad nuclear interacting protein 1 [Coprinopsis cinerea
okayama7#130]
gi|298405689|gb|EAU85891.2| smad nuclear interacting protein 1 [Coprinopsis cinerea
okayama7#130]
Length = 283
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP G +L + +G + + S IGR D+ + S +H I+
Sbjct: 156 EPPEARKPSVGWRLYVFKGKEQLDPLHIYRQSAYLIGRDRLVADIVLDHPSCSKQHAAIQ 215
Query: 55 -----------SVSG--KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
++ G K I DL+S NGT +N +PP ++LR +D IK G
Sbjct: 216 YRFVHEKDEFGTIKGVVKPFIIDLESTNGTMVNDEKIPPARYYELRASDVIKFG 269
>gi|270284586|ref|ZP_05966379.2| FHA domain protein [Bifidobacterium gallicum DSM 20093]
gi|270276493|gb|EFA22347.1| FHA domain protein [Bifidobacterium gallicum DSM 20093]
Length = 409
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G +I + + +GR N + + D+ +SS H + + +G W ++DL
Sbjct: 317 LVIIDGPLAGSSIPLN-DAPVTLGRAA-SNSLVLDDEFVSSHHARVYPDPETGVWAVEDL 374
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT +N + TP L +++G T
Sbjct: 375 HSTNGTVVNQQRI--TTPTILGPRVPVRIGATT 405
>gi|212543063|ref|XP_002151686.1| cytoplasm to vacuole targeting Vps64, putative [Talaromyces
marneffei ATCC 18224]
gi|210066593|gb|EEA20686.1| cytoplasm to vacuole targeting Vps64, putative [Talaromyces
marneffei ATCC 18224]
Length = 739
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + LI + G + T+ + P +RIGR + +G +S +H
Sbjct: 164 DPPAILTLIPLNGTFEKKHITVPYMP-EVLRIGRQTNAKTIPTPVNGYFDSKVLSRQHAE 222
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
I GK I+D+ S NGTF+N L P + P +LREND + LG
Sbjct: 223 IWADRRGKIWIRDIKSSNGTFVNGQRLSPESRESEPHELRENDALDLG 270
>gi|125975524|ref|YP_001039434.1| FHA domain-containing protein [Clostridium thermocellum ATCC 27405]
gi|125715749|gb|ABN54241.1| FHA domain containing protein [Clostridium thermocellum ATCC 27405]
Length = 174
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ IKD IS H I + +G I+D+ S NGTF+N L L++ D IK+G+
Sbjct: 105 NDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGEEVPLKDGDNIKIGN 164
Query: 97 CTTISVQ 103
+ V
Sbjct: 165 VKFLFVS 171
>gi|220906515|ref|YP_002481826.1| FHA domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863126|gb|ACL43465.1| FHA domain containing protein [Cyanothece sp. PCC 7425]
Length = 317
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
G + R+GR R ND+ + D +S H ++E G ++ DL S NG+F+N
Sbjct: 59 GQRWRLGR-HRDNDIIVPDRWVSRHHALLECTPGGFSFSDLGSYNGSFVN 107
>gi|441518016|ref|ZP_20999745.1| hypothetical protein GOHSU_23_00520 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455158|dbj|GAC57706.1| hypothetical protein GOHSU_23_00520 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 456
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKW 60
P + LI+ G S T +PGS + I RG D + D G+S +H+ I
Sbjct: 362 PATITLILEDG--SNRTYALRPGSNV----IGRGQDAQFRLPDTGVSRRHIEITWDGQSA 415
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104
++DL S NGT +N P + ++L + D I+LG + ISV+
Sbjct: 416 MLRDLSSTNGTTVNGM---PVSSWNLADKDRIRLG-HSDISVRF 455
>gi|386839346|ref|YP_006244404.1| ABC transporter ATP-binding protein [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|374099647|gb|AEY88531.1| ABC transporter ATP-binding protein [Streptomyces hygroscopicus
subsp. jinggangensis 5008]
gi|451792639|gb|AGF62688.1| ABC transporter ATP-binding protein [Streptomyces hygroscopicus
subsp. jinggangensis TL01]
Length = 852
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 11 VRGPRSGETI-EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSC 68
V G RS T +F +RIGR + ND+ + D +S H + G++ I+DL S
Sbjct: 177 VHGDRSPTTFHQFALDRVMRIGRALE-NDLVVSDLQVSRNHAEFHATPDGRFEIRDLGSH 235
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGTF+N +P + L D + +G T
Sbjct: 236 NGTFVNGQPIPKGSAQLLGPTDIVGVGHST 265
>gi|359145364|ref|ZP_09179155.1| hypothetical protein StrS4_06790, partial [Streptomyces sp. S4]
Length = 178
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 39 VTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLP--PNTPFDLRENDTIKLG 95
V +D G+S +H ++++ G W + D +S NGT +N P P P L + D + +G
Sbjct: 109 VPPEDPGVSHQHAMLVQQPDGGWAVVDQNSTNGTTVNGGEDPIQPYVPVPLSDGDRVHVG 168
Query: 96 DCTTISVQ 103
TTI+++
Sbjct: 169 AWTTITLR 176
>gi|115374051|ref|ZP_01461340.1| sigma-54 interaction domain family [Stigmatella aurantiaca DW4/3-1]
gi|115368941|gb|EAU67887.1| sigma-54 interaction domain family [Stigmatella aurantiaca DW4/3-1]
Length = 504
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
L+++ R+G G +RIG+ NDV I +S HL++ ++ +QDL
Sbjct: 79 FHLVLLDTERAGTVFPLS-GEVLRIGKAPE-NDVVIDHPTVSRNHLLVRRQGDRFLVQDL 136
Query: 66 DSCNGTFLN 74
S NGTFL+
Sbjct: 137 GSTNGTFLD 145
>gi|453382321|dbj|GAC83204.1| hypothetical protein GP2_009_00680 [Gordonia paraffinivorans NBRC
108238]
Length = 839
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ + +S +HL IE W + DL S NG F +P F + ++LGD
Sbjct: 35 NDIVVNHPLVSRRHLAIEWRGSAWYLVDLGSTNGFFAGGQRVP---EFAVSGPTRVRLGD 91
Query: 97 CTTISVQMITMD 108
TT V + D
Sbjct: 92 ATTGPVLDVAFD 103
>gi|338535862|ref|YP_004669196.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
gi|337261958|gb|AEI68118.1| FHA domain-containing protein [Myxococcus fulvus HW-1]
Length = 484
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+ L + +G ++G + F+ +++ IGR ND+ + D G+S +H I K+ + D+
Sbjct: 3 ILLTITQGLQTGRELTFE-SAEVNIGRTSE-NDLVLHDHGVSRQHARIVLRDDKYYVADM 60
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
S NGT LN + L LR+ D I +G V + DE +P R
Sbjct: 61 GSSNGTVLNGSLLSGEQ--QLRDGDKIGVGPVEFTFVWVPP--EGDEDATRPIR 110
>gi|254819098|ref|ZP_05224099.1| hypothetical protein MintA_04183 [Mycobacterium intracellulare ATCC
13950]
gi|406028201|ref|YP_006727090.1| xyppx repeat-containing protein [Mycobacterium indicus pranii MTCC
9506]
gi|405126748|gb|AFS12003.1| xyppx repeat-containing protein [Mycobacterium indicus pranii MTCC
9506]
Length = 542
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 459 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 514
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 515 NNA---PVQEWQLADGDVIRLGHSEII 538
>gi|347755885|ref|YP_004863449.1| serine/threonine protein kinase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588403|gb|AEP12933.1| Serine/threonine protein kinase [Candidatus Chloracidobacterium
thermophilum B]
Length = 446
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 46 ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT-LPPNTPFDLRENDTIKLGD 96
+S +H + G++ I+DL S NGTFLN L P TP L+ D +KLG+
Sbjct: 387 VSRRHARLFQEGGRFFIEDLSSVNGTFLNGNVRLIPKTPHPLQNGDELKLGE 438
>gi|338536790|ref|YP_004670124.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
gi|337262886|gb|AEI69046.1| sigma-54 dependent transcription regulator [Myxococcus fulvus HW-1]
Length = 459
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTI 62
P +KL+++ G ++G++ +PG +R+G D+ + D +S +HL +E +
Sbjct: 21 PLRLKLLVLSGAQAGQSHALRPGV-VRLG-TSSACDIVLTDRVVSRRHLQLEVTEERVVA 78
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQD 111
DL S NG+F + T ++R + LG T+ ++++ DS++
Sbjct: 79 TDLGSRNGSFYDGVRF---TELEVRPGAALTLG---TVVLKVVPEDSRE 121
>gi|392578946|gb|EIW72073.1| hypothetical protein TREMEDRAFT_24410, partial [Tremella
mesenterica DSM 1558]
Length = 150
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 21/115 (18%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP +L + +G + I S IGR D+ I S +H +I+
Sbjct: 21 EPPEARKPLKNWRLYVFKGSEQIDLIHIYKQSCYLIGRDTVVTDIPIAHPSCSKQHAVIQ 80
Query: 55 -------------SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREND-TIKLG 95
S S K I DL+S NGTF+N +P + ++LR D IK G
Sbjct: 81 FRQISEKNEYGEVSTSVKPFIIDLESTNGTFVNDQEVPKSRYYELRNTDVVIKFG 135
>gi|389744589|gb|EIM85771.1| SMAD/FHA domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 159
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP G +L + +G + + S IGR D+ I S +H +I+
Sbjct: 32 EPPEARKPVVGWRLYVFKGSEQVDLLHIHRQSAYLIGRDHTVADIPIDHPSCSKQHAVIQ 91
Query: 55 SV-------------SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S K + DLDS NGT +N T+P ++L+ +D +K G T
Sbjct: 92 YRYVQTKDEYGASKGSIKPFVIDLDSTNGTHVNDETIPTTRFYELKPSDVLKFGQST 148
>gi|387876350|ref|YP_006306654.1| hypothetical protein W7S_14810 [Mycobacterium sp. MOTT36Y]
gi|386789808|gb|AFJ35927.1| hypothetical protein W7S_14810 [Mycobacterium sp. MOTT36Y]
Length = 839
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|254820993|ref|ZP_05225994.1| hypothetical protein MintA_13745 [Mycobacterium intracellulare
ATCC 13950]
gi|379747695|ref|YP_005338516.1| hypothetical protein OCU_29760 [Mycobacterium intracellulare ATCC
13950]
gi|378800059|gb|AFC44195.1| hypothetical protein OCU_29760 [Mycobacterium intracellulare ATCC
13950]
Length = 839
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|221194634|ref|ZP_03567691.1| FHA domain containing protein [Atopobium rimae ATCC 49626]
gi|221185538|gb|EEE17928.1| FHA domain containing protein [Atopobium rimae ATCC 49626]
Length = 136
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS---GKWTIQD 64
L +V+GP++GET E + I +GR + N V + D +S H I+ + G TI+D
Sbjct: 38 LTIVKGPQTGETFELD-STHISLGRDPK-NSVFLNDMTVSRHHAQIDLSNLGLGYATIED 95
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
L+S NGT+++ + T L++ TI++G
Sbjct: 96 LNSLNGTWVDGAIINKAT---LQDGSTIQIG 123
>gi|195399628|ref|XP_002058421.1| GJ14404 [Drosophila virilis]
gi|194141981|gb|EDW58389.1| GJ14404 [Drosophila virilis]
Length = 669
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 16/88 (18%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESV---------SGK------WTIQDLDSCNGTFLN 74
GR+ NDV + IS H +++ S K W I DL S +GTFLN
Sbjct: 79 FGRLP-DNDVAMAHPTISRYHAVLQYKPKASQEDDDSSKPDQPEGWYIYDLGSTHGTFLN 137
Query: 75 STTLPPNTPFDLRENDTIKLGDCTTISV 102
+PP +R +KLG T + +
Sbjct: 138 KQRVPPRVFIRIRVGHMLKLGSSTRVYI 165
>gi|116668593|ref|YP_829526.1| FHA domain-containing protein [Arthrobacter sp. FB24]
gi|116608702|gb|ABK01426.1| FHA domain containing protein [Arthrobacter sp. FB24]
Length = 160
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP G TI S I +GR + + ++DD S +H + +W I+DL
Sbjct: 68 QLVVTEGPLKGHTIPLA-DSPILLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 125
Query: 67 SCNGTFLNSTTLPPNTPFDL 86
S NGT+L + L P +L
Sbjct: 126 STNGTYLANQQLTRALPVEL 145
>gi|255281801|ref|ZP_05346356.1| putative FHA domain protein [Bryantella formatexigens DSM 14469]
gi|255267474|gb|EET60679.1| FHA domain protein [Marvinbryantia formatexigens DSM 14469]
Length = 620
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 7 KLIMVRG-PRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
L++V PR + I + S I +G++ +D+ ++ +S H I+ + + D+
Sbjct: 523 HLVLVSADPRRKDGIVLENDSYI-VGKLPSQSDIVLEHSSVSRVHARIQRYGKDYYLCDM 581
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+S NGTFLN L P +R +D I
Sbjct: 582 NSTNGTFLNGQRLAIKEPVKIRPDDEIAFA 611
>gi|451851735|gb|EMD65033.1| hypothetical protein COCSADRAFT_88627 [Cochliobolus sativus ND90Pr]
Length = 469
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGETIEFKP---------GSKIRIGRIVRGND-------------VTI 41
P ++ I + PR+G P + +R+GR ++ +
Sbjct: 53 PSIRFIPHQDPRAGRPSLIFPTITRTLPDESAVLRVGRYSERDNAPEISSNTPSAAAIGF 112
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
K +S KH + G W I+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 113 KSKVVSRKHCELWCKDGSWYIKDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 170
>gi|379762487|ref|YP_005348884.1| hypothetical protein OCQ_30510 [Mycobacterium intracellulare
MOTT-64]
gi|378810429|gb|AFC54563.1| hypothetical protein OCQ_30510 [Mycobacterium intracellulare
MOTT-64]
Length = 839
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|298243572|ref|ZP_06967379.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
gi|297556626|gb|EFH90490.1| FHA domain containing protein [Ktedonobacter racemifer DSM 44963]
Length = 408
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 12 RGPRSGETIEFKPGSKIRIGRIV------RGNDVTIKDDG-ISSKHLIIESVSGKWTIQD 64
R P + +++ + G+ RI + V ND+ + D +S +H + GK+ + D
Sbjct: 4 RQPLASVSVKGQHGNAYRIDQPVTLIGRSSKNDIPLSGDRLVSRRHATLCFEQGKYILTD 63
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
DS NGT++N + P+ P+ LR +++G
Sbjct: 64 EDSANGTYINGIKIAPHRPYILRHGAELRIG 94
>gi|226366078|ref|YP_002783861.1| hypothetical protein ROP_66690 [Rhodococcus opacus B4]
gi|226244568|dbj|BAH54916.1| hypothetical protein [Rhodococcus opacus B4]
Length = 215
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 18 ETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNS 75
T++ P S ++ IGR + + +DD +S H ++E V WTI D S NGTF+N
Sbjct: 28 HTVDLSPTSARVTIGRSPGSDLLLTEDDEVSRLHAVLECVGSHWTILDDGLSRNGTFVNG 87
Query: 76 TTLPPNTPFDLRENDTIKLG 95
L LR+ D+I++G
Sbjct: 88 ERLAGRRR--LRQGDSIRIG 105
>gi|212721554|ref|NP_001131275.1| uncharacterized protein LOC100192588 [Zea mays]
gi|194691054|gb|ACF79611.1| unknown [Zea mays]
Length = 217
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLII-------ESVSGKWT------IQDLDSCNGTFLNST 76
GR + DV S +H ++ E + G T + DLDS NGTF+N
Sbjct: 124 FGRERKVADVPTDHPSCSKQHAVLQYRLVEKEQLDGMMTKKIRPYLMDLDSTNGTFINGN 183
Query: 77 TLPPNTPFDLRENDTIKLGDCT 98
+ P ++L E DTIK G+ +
Sbjct: 184 RIEPRRYYELFEKDTIKFGNSS 205
>gi|170049709|ref|XP_001858116.1| tropomyosin [Culex quinquefasciatus]
gi|167871473|gb|EDS34856.1| tropomyosin [Culex quinquefasciatus]
Length = 889
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVT----IKDDGISSK-HLIIESVSGKWTIQDLDSCNGTFL 73
T+ +P ++++GR V N V+ I D + S+ H ++ GK+ I+D S NGTF+
Sbjct: 8 TLFLEPHQEVKVGRSVARNRVSENNAIFDCKVLSRNHAVLWYNDGKFFIKDTGSSNGTFI 67
Query: 74 NSTTLPPNT----PFDLRENDTIKLG 95
N+ L + P+++ D ++ G
Sbjct: 68 NNVRLSQTSTESEPYEVSSGDIVQFG 93
>gi|157129512|ref|XP_001655403.1| hypothetical protein AaeL_AAEL011502 [Aedes aegypti]
gi|108872180|gb|EAT36405.1| AAEL011502-PA [Aedes aegypti]
Length = 695
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRI----GRIVR--GNDVTIKDDGISSKHLIIE-- 54
PP ++LI+ + K GS I G + R +DV I D +S HL
Sbjct: 316 PPSLRLIV----QESSVASLKQGSLFIITCKGGSLGREGDHDVIIPDINVSKYHLKFSYN 371
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPPNTP----FDLRENDTIKL 94
+ +G + + DL S NGTFLN T + P FD+ D I L
Sbjct: 372 TRTGAYQLVDLGSRNGTFLNGTRMAPTMQESDEFDIMHGDVIDL 415
>gi|111023593|ref|YP_706565.1| forkhead domain-containing protein [Rhodococcus jostii RHA1]
gi|110823123|gb|ABG98407.1| possible forkhead associated domain [Rhodococcus jostii RHA1]
Length = 215
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 18 ETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNS 75
T++ P S ++ IGR + + +DD +S H ++E V WTI D S NGTF+N
Sbjct: 28 HTVDLSPTSARVTIGRSPGSDLLLTEDDEVSRLHAVLECVGSHWTILDDGLSRNGTFVNG 87
Query: 76 TTLPPNTPFDLRENDTIKLG 95
L LR+ D+I++G
Sbjct: 88 ERLAGRRR--LRQGDSIRIG 105
>gi|115376381|ref|ZP_01463618.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115366588|gb|EAU65586.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 516
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ I+D +S H+++ V W + DL S NGT +N + P L D + LGD
Sbjct: 17 ICIQDSSVSRNHILLRRVDSGWMVSDLGSGNGTLVNGEQITEEVP--LANGDIVTLGDTE 74
Query: 99 TISVQM 104
M
Sbjct: 75 VTFADM 80
>gi|379754997|ref|YP_005343669.1| hypothetical protein OCO_29850 [Mycobacterium intracellulare
MOTT-02]
gi|378805213|gb|AFC49348.1| hypothetical protein OCO_29850 [Mycobacterium intracellulare
MOTT-02]
Length = 839
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|340712866|ref|XP_003394974.1| PREDICTED: hypothetical protein LOC100648742 [Bombus terrestris]
Length = 482
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
RIGR R ND I + IS KH I++ +WTI+D+ S + TF+N + +
Sbjct: 44 FRIGR-ARDNDEIILNAVISRKHCILKCEEDEWTIKDVSS-SATFVNDVPVVSGQSKKIY 101
Query: 88 ENDTIKLGDCTTISVQMITMDSQD-ESVAKPKRNPRRQANV 127
E D I+ + + T+D + V KPK + + NV
Sbjct: 102 EGDVIQFSESEEFKY-LFTLDVKYRHKVKKPKLDEQILDNV 141
>gi|296167110|ref|ZP_06849520.1| xyppx repeat-containing protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897552|gb|EFG77148.1| xyppx repeat-containing protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 549
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I + RG D + D G+S +HL I + DL+S NGT +
Sbjct: 466 SGRTYQLREGSNI----VGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 521
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 522 NNA---PVQEWQLADGDVIRLGHSEII 545
>gi|241634349|ref|XP_002410507.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
gi|215503436|gb|EEC12930.1| splicing endonuclease positive effector sen1, putative [Ixodes
scapularis]
Length = 1103
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+W+I+DL S NG F+N +P P + END I LG
Sbjct: 58 GRWSIEDLRSHNGVFVNGEKIPALRPLVILENDLIGLG 95
>gi|389646443|ref|XP_003720853.1| hypothetical protein MGG_02878 [Magnaporthe oryzae 70-15]
gi|86196592|gb|EAQ71230.1| hypothetical protein MGCH7_ch7g637 [Magnaporthe oryzae 70-15]
gi|351638245|gb|EHA46110.1| hypothetical protein MGG_02878 [Magnaporthe oryzae 70-15]
gi|440474739|gb|ELQ43464.1| hypothetical protein OOU_Y34scaffold00150g11 [Magnaporthe oryzae
Y34]
gi|440484510|gb|ELQ64572.1| hypothetical protein OOW_P131scaffold00601g7 [Magnaporthe oryzae
P131]
Length = 807
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
Query: 4 PGMKLIMVRGPRSGETIE--FKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIE 54
P + L+ + G +TI F P + +RIGR V +G +S +H I
Sbjct: 160 PVLYLLSLNGTFERKTISVPFSPDT-LRIGRQTNARTVPTPVNGYFDSKVLSRQHAEIWA 218
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
SGK I+D+ S NGTF+N T L P P +L+ +D ++LG
Sbjct: 219 ERSGKIYIRDIKSSNGTFVNGTRLSPENRDSEPHELQTSDHLELG 263
>gi|404330994|ref|ZP_10971442.1| hypothetical protein SvinD2_12948 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 226
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 12/69 (17%)
Query: 19 TIEFKPGSK-----------IRIGRIVRGNDVTIKDDGISSK-HLIIESVSGKWTIQDLD 66
TI+++ GS+ +RIGR D+ I +DG + H +I + SGK+ + DLD
Sbjct: 133 TIDYQIGSEKEQYSWTGSEPVRIGRDPDQCDLVIANDGYVGRVHALIYTKSGKYYLVDLD 192
Query: 67 SCNGTFLNS 75
S NGT++ S
Sbjct: 193 SKNGTYIES 201
>gi|295660084|ref|XP_002790599.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281474|gb|EEH37040.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 752
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 2 EPPG-MKLIMVRGP--RSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL- 51
+PP + L+ + G R T+ + P +R+GR + +G +S +H
Sbjct: 162 DPPAILSLLPINGTFERKQITVPYFP-EVLRVGRQTNAKTIPTPINGYFDSKVLSRQHAE 220
Query: 52 IIESVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
+ +GK I+D+ S NGTF+N L P P +LRE+DT++LG
Sbjct: 221 VWADRAGKIWIRDVKSSNGTFVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|429758884|ref|ZP_19291396.1| FHA domain protein [Actinomyces sp. oral taxon 181 str. F0379]
gi|429172580|gb|EKY14128.1| FHA domain protein [Actinomyces sp. oral taxon 181 str. F0379]
Length = 158
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ GP G I S I IGR + + ++D+ SS+H + G+W I+DL S
Sbjct: 67 LLLTGGPLVGTIIPLG-ASPIIIGR-SPSSTLVLEDEYASSQHARLTPADGQWWIEDLGS 124
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGTF++ L +P +L D +++G T
Sbjct: 125 RNGTFVDDERL--TSPRELNVGDIVRIGQTT 153
>gi|254775596|ref|ZP_05217112.1| ABC transporter, ATP-binding protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 840
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
+GR V+ DV I D IS HLI+ G+W D S NGT+LN +P D+ +
Sbjct: 3 VGRHVQA-DVRIPDPRISRAHLILRFEQGRWLAIDNGSLNGTYLNGYRMP---VVDIHDG 58
Query: 90 DTIKLGD 96
+I +G+
Sbjct: 59 QSIHVGN 65
>gi|116207594|ref|XP_001229606.1| hypothetical protein CHGG_03090 [Chaetomium globosum CBS 148.51]
gi|88183687|gb|EAQ91155.1| hypothetical protein CHGG_03090 [Chaetomium globosum CBS 148.51]
Length = 623
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL-PPNT---PFDLRENDTIKL 94
V K +S +H GKW I+D+ S +GTFLN L PP T P+ + + D ++L
Sbjct: 283 VGFKSKVVSRRHCEFWYEEGKWYIKDVKSSSGTFLNHIRLSPPGTESKPYPVNDGDIVQL 342
Query: 95 G 95
G
Sbjct: 343 G 343
>gi|408676048|ref|YP_006875875.1| putative ABC transporter ATP-binding protein [Streptomyces
venezuelae ATCC 10712]
gi|328880377|emb|CCA53616.1| putative ABC transporter ATP-binding protein [Streptomyces
venezuelae ATCC 10712]
Length = 909
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNT 82
P IRIGR NDV + D +S +H + + G + I DL S NGTFLN + P
Sbjct: 262 PAHSIRIGR-APDNDVVVPDLVVSRRHAELRAHPDGTYWIHDLGSHNGTFLNGS---PVV 317
Query: 83 PFDLRENDTIKLGDCT 98
+ D + +G C
Sbjct: 318 DARVTPADIVGVGHCA 333
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 17 GETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
G+ P RIGR G D+ + D +S H ++ + G+WT+ D S NGT+
Sbjct: 19 GDATRMIPSRVYRIGRDPDG-DIVLTDARVSWHHAVLRAADGRWTLADEGSTNGTY 73
>gi|366163078|ref|ZP_09462833.1| FHA domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 173
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 39 VTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+ I D G+S +HL +I + G + DL++ NGT LNS L P L++ D + +G
Sbjct: 106 ININDPGVSHRHLKLIYNKEGNLEVLDLNTLNGTKLNSNDLEPGVNISLQDQDELIIGIW 165
Query: 98 TTISVQ 103
T I +Q
Sbjct: 166 TRIKIQ 171
>gi|148271198|ref|YP_001220759.1| hypothetical protein CMM_0020 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829128|emb|CAN00026.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 194
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS--TTLPPNTPFD 85
+ I+DD S+ H + + +W IQDLDS NGTFL+ ++P P D
Sbjct: 132 LVIRDDYTSTHHARLLLWNDEWMIQDLDSTNGTFLDGKRVSVPTQVPLD 180
>gi|281419444|ref|ZP_06250458.1| FHA domain containing protein [Clostridium thermocellum JW20]
gi|281406850|gb|EFB37114.1| FHA domain containing protein [Clostridium thermocellum JW20]
Length = 174
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ IKD IS H I + +G I+D+ S NGTF+N L L++ D IK+G+
Sbjct: 105 NDIVIKDPFISGIHAYIMTENGTVRIKDMGSKNGTFVNGVRLNEGEEVPLKDGDNIKIGN 164
Query: 97 CTTISVQ 103
+ V
Sbjct: 165 VKFLFVS 171
>gi|170780484|ref|YP_001708816.1| hypothetical protein CMS_0022 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155052|emb|CAQ00148.1| putative secreted protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 193
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS--TTLPPNTPFD 85
+ I+DD S+ H + + +W IQDLDS NGTFL+ ++P P D
Sbjct: 131 LVIRDDYTSTHHARLLLWNDEWMIQDLDSTNGTFLDGKRVSVPTQVPLD 179
>gi|115386166|ref|XP_001209624.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190622|gb|EAU32322.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 748
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +RIGR +G +S +H I SGK I+D+ S NGT
Sbjct: 182 TVPYYP-EILRIGRQTNAKTAPSPVNGYFDSKVLSRQHAEIWADKSGKIWIRDVKSSNGT 240
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LREND + LG
Sbjct: 241 FINGKRLSPENRESEPHELRENDQLDLG 268
>gi|443306107|ref|ZP_21035895.1| hypothetical protein W7U_10605 [Mycobacterium sp. H4Y]
gi|442767671|gb|ELR85665.1| hypothetical protein W7U_10605 [Mycobacterium sp. H4Y]
Length = 839
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|406607753|emb|CCH40858.1| hypothetical protein BN7_392 [Wickerhamomyces ciferrii]
Length = 235
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIE-------------SVSGKWTIQDLDSCNGTFLNST 76
IGR D++ D+ S +H +I+ +V K + DL+S NGTFLN+
Sbjct: 145 IGRDETIVDLSTDDESCSKQHAVIQFRSRPIIDEYGSQAVQIKPYLIDLESSNGTFLNNE 204
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMI 105
+P + +L+ DTI+ GD T V +I
Sbjct: 205 EIPTSRFIELQGEDTIRFGDSETDHVLVI 233
>gi|297564164|ref|YP_003683137.1| FHA domain-containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848613|gb|ADH70631.1| FHA domain containing protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 168
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ +G G +++ I IGR + + I DD S +H + S +G+W ++DL+S
Sbjct: 77 LVVTQGSLKGTSVDLA-SQPILIGR-APDSTLVITDDYASGRHARVYSDNGRWFVEDLNS 134
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+L L N P + I++G
Sbjct: 135 TNGTYLGQQKL--NRPQPITVGQPIRIG 160
>gi|148658035|ref|YP_001278240.1| FHA domain-containing protein [Roseiflexus sp. RS-1]
gi|148570145|gb|ABQ92290.1| FHA domain containing protein [Roseiflexus sp. RS-1]
Length = 529
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83
P + + IGR + + I D +S +HL + + +D+ S GT LN L +P
Sbjct: 57 PAATVTIGR-AHDSTILISDPKVSRRHLQLTWNGAAFVAEDVGSSGGTLLNGMPL--RSP 113
Query: 84 FDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQA-NVPGTSSVRA 135
LR DT+ +GD ++ + + S +V P PR QA +VP T + A
Sbjct: 114 TILRPGDTLSIGD----TILRLEIASGTATVLAP---PREQAPSVPQTPTTPA 159
>gi|383760495|ref|YP_005439481.1| FHA domain-containing protein [Rubrivivax gelatinosus IL144]
gi|381381165|dbj|BAL97982.1| FHA domain containing protein [Rubrivivax gelatinosus IL144]
Length = 221
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ I + +S +H +++ V I+DL+S NGT++N + L NDT+++G
Sbjct: 31 NDIVIDNLAVSGEHAVLQMVGADVFIEDLNSTNGTYINGKAIKKQL---LAHNDTVEIGK 87
Query: 97 CTTISVQMITMDSQDESVAKPKRN---------PRRQANVPGTSSVR-----------AT 136
+ D + V +P + P R + P ++ A
Sbjct: 88 YKIKYLTEENSDYEKTLVMRPAASTPPPFTSAGPTRSGHAPIIAAAASGSASIKVLNGAA 147
Query: 137 SGRKKAEAEPVETLGLEGGQIEDQSR 162
+GR+ + V T+G G Q+ +R
Sbjct: 148 AGREVMLTKVVTTVGKPGVQVASITR 173
>gi|378726723|gb|EHY53182.1| hypothetical protein HMPREF1120_01380 [Exophiala dermatitidis
NIH/UT8656]
Length = 614
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH V G+W I+D+ S +GTFLN L PNT F +++ D ++L
Sbjct: 247 VGFKSKVVSRKHCEFSFVDGQWQIRDVASSSGTFLNHIRLSQPNTESKLFPIKDGDIVQL 306
Query: 95 G 95
G
Sbjct: 307 G 307
>gi|225432578|ref|XP_002281192.1| PREDICTED: protein phosphatase 2C 70 [Vitis vinifera]
gi|297737010|emb|CBI26211.3| unnamed protein product [Vitis vinifera]
Length = 584
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRI----GRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G+ + R+ GR V +D+ +KD +S KH +I K
Sbjct: 177 LTLEVISGPSRGDRCSISSTNTSRLPMTLGR-VSPSDLLVKDSEVSGKHALINWNLNKLK 235
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGT LNS ++ P++ P +L D I LG + I VQ+
Sbjct: 236 WELVDMGSLNGTLLNSQSVNHPDSGMRHWGDPIELASGDIITLGTTSKIRVQI 288
>gi|46125221|ref|XP_387164.1| hypothetical protein FG06988.1 [Gibberella zeae PH-1]
Length = 297
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 181 WKLFIFKGQDIVDTIELSARSCWLVGREMSVVDLPAEHPSISKQHAVIQFRYVEKRNEFG 240
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR+ D I+ G T V M+
Sbjct: 241 DKIGKVKPYLIDLESANGTKLNDGKIPDSRYLELRDKDMIQFGHSTREYVVMLA 294
>gi|406031197|ref|YP_006730088.1| white-brown complex-like protein [Mycobacterium indicus pranii
MTCC 9506]
gi|405129744|gb|AFS14999.1| putative white-brown complex-like protein [Mycobacterium indicus
pranii MTCC 9506]
Length = 839
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 10 DVQIADPRISRAHLILRFDQGRWLAIDNGSLNGTYLNGYRMP---VIDIHDGQSIHVGN 65
>gi|328722398|ref|XP_003247569.1| PREDICTED: hypothetical protein LOC100163438 isoform 3
[Acyrthosiphon pisum]
Length = 402
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
V+ R+GE + K S GR ++ + + I++ IS H I + K+ ++D +SC
Sbjct: 39 FVQDTRTGEVYDVKTDSDFLFGRFLKSS-IVIEELYISRSHSTIRYENDKFLLKDNNSCT 97
Query: 70 GTFLN 74
GT+LN
Sbjct: 98 GTYLN 102
>gi|145489101|ref|XP_001430553.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397652|emb|CAK63155.1| unnamed protein product [Paramecium tetraurelia]
Length = 203
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES-----VSGKW 60
++ +G +S +I K S IG+ D+ +++ +S +H +I+ V+G+
Sbjct: 90 WQIFPFKGTQSYPSISLKGKSVFLIGKDKEIVDILVENLSVSKQHCVIQFREIKKVNGQG 149
Query: 61 TI--------QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ DL+S NGT+LN L P ++L E D ++ G
Sbjct: 150 EVLSYIKPYAMDLESTNGTYLNEQQLEPARYYELLEEDVLRFG 192
>gi|116622534|ref|YP_824690.1| serine phosphatase [Candidatus Solibacter usitatus Ellin6076]
gi|116225696|gb|ABJ84405.1| serine phosphatase [Candidatus Solibacter usitatus Ellin6076]
Length = 544
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G ++ IGR +D G+S +H E WT+QDL S NGTF+N+ +P
Sbjct: 21 GGRLSIGRSSAAELCFPEDAGLSRQHFAFEPEGEDWTVQDLGSKNGTFVNN--IPLKARL 78
Query: 85 DLRENDTIKLGDCTTI 100
L+ D + G +
Sbjct: 79 ILKPGDRVTAGHLVIV 94
>gi|325961476|ref|YP_004239382.1| FHA domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
gi|323467563|gb|ADX71248.1| FHA domain-containing protein [Arthrobacter phenanthrenivorans
Sphe3]
Length = 160
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V GP G T+ S I +GR + + ++DD S +H + +W I+DL
Sbjct: 68 QLVVVEGPLKGTTLPLA-ASPILLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 125
Query: 67 SCNGTFL 73
S NGT+L
Sbjct: 126 STNGTYL 132
>gi|367031718|ref|XP_003665142.1| hypothetical protein MYCTH_2308539 [Myceliophthora thermophila ATCC
42464]
gi|347012413|gb|AEO59897.1| hypothetical protein MYCTH_2308539 [Myceliophthora thermophila ATCC
42464]
Length = 326
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TIE S IGR + D+ + IS +H +I+
Sbjct: 210 WKLFIFKGQDIIDTIELSTRSCWLIGRDLAVVDLPAEHPSISKQHAVIQFRYTEKRNEYG 269
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR D ++ G T V M+
Sbjct: 270 DKIGRVKPYLIDLESANGTMLNGEKVPESRYLELRNKDMLQFGSSTREYVLMLA 323
>gi|443488525|ref|YP_007366672.1| FHA domain containing protein [Mycobacterium liflandii 128FXT]
gi|442581022|gb|AGC60165.1| FHA domain containing protein [Mycobacterium liflandii 128FXT]
Length = 546
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 463 SGRTYQLRDGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 518
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 519 NNA---PVQEWQLADGDVIRLGHSEII 542
>gi|302549138|ref|ZP_07301480.1| ABC transporter ATP-binding protein [Streptomyces
viridochromogenes DSM 40736]
gi|302466756|gb|EFL29849.1| ABC transporter ATP-binding protein [Streptomyces
viridochromogenes DSM 40736]
Length = 778
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
+G T+ PG +GR +D+ I DD +S H ++ G WTI+D +S NGT+
Sbjct: 18 TGSTVML-PGHDYHVGRDPL-SDIVIDDDRVSWHHAVLRPEDGHWTIEDENSTNGTY 72
>gi|183980057|ref|YP_001848348.1| hypothetical protein MMAR_0022 [Mycobacterium marinum M]
gi|183173383|gb|ACC38493.1| conserved protein [Mycobacterium marinum M]
Length = 546
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 463 SGRTYQLRDGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 518
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 519 NNA---PVQEWQLADGDVIRLGHSEII 542
>gi|242761974|ref|XP_002340285.1| FHA domain protein [Talaromyces stipitatus ATCC 10500]
gi|218723481|gb|EED22898.1| FHA domain protein [Talaromyces stipitatus ATCC 10500]
Length = 551
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
+ K +S KH V+G+W I+D+ S +GTFLN T L PN + +R+ D ++L
Sbjct: 233 IGFKSKVVSRKHCEFSMVNGQWHIKDVGSSSGTFLNRTRLSQPNMASRLYAVRDGDIVQL 292
Query: 95 G 95
G
Sbjct: 293 G 293
>gi|87307263|ref|ZP_01089408.1| hypothetical protein DSM3645_17110 [Blastopirellula marina DSM
3645]
gi|87290003|gb|EAQ81892.1| hypothetical protein DSM3645_17110 [Blastopirellula marina DSM
3645]
Length = 225
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 8 LIMVRGPRSGETIEFK-PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
L +VRGP SG+ EFK P IGR G + K D IS KH + K I+D
Sbjct: 5 LRVVRGPSSGK--EFKIPVDSFVIGR-GDGCHLKPKSDMISRKHCELRVADSKLVIEDFG 61
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQA 125
S NGTF+N+ + +L+ D +++G ++ +D + +P+ N ++A
Sbjct: 62 SKNGTFVNNEAISGTV--ELKMGDELRVGPLEF----LVLIDHSLGAAKRPRVNSVKEA 114
>gi|262196799|ref|YP_003268008.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262080146|gb|ACY16115.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 157
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 34 VRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
V GN V + D +S KHL I V + + DL S NG ++N +P T L D ++
Sbjct: 90 VAGNTVVLSDPAVSRKHLGIRRVGSTYELADLGSTNGVYVNGHRMPKKT---LVPGDVLR 146
Query: 94 LGD 96
+G+
Sbjct: 147 VGN 149
>gi|297198726|ref|ZP_06916123.1| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC
29083]
gi|197715393|gb|EDY59427.1| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC
29083]
Length = 874
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 11 VRGPRSGETI-EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSC 68
V G RS T +F G +RIGR + ND+ + D +S H S+ G+ I+DL S
Sbjct: 198 VYGDRSPTTFHQFTIGRIMRIGRALE-NDLVVSDLQVSRNHAEFHSMPDGRMEIRDLGSH 256
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGT++N +P L +D + +G T
Sbjct: 257 NGTYVNGQPIPKGGSTLLGPSDIVGVGHST 286
>gi|332298166|ref|YP_004440088.1| FHA domain-containing protein [Treponema brennaborense DSM 12168]
gi|332181269|gb|AEE16957.1| FHA domain containing protein [Treponema brennaborense DSM 12168]
Length = 114
Score = 42.7 bits (99), Expect = 0.22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+KI IGR N++ I + S H +I+ + + ++D +S NGTFLN +P +
Sbjct: 39 AKISIGRAPE-NNIIIDNKLASRHHALIQKIKDAYFLKDENSTNGTFLNGRRIPSDKYVK 97
Query: 86 LRENDTIKLGDCTTI 100
L D I +G+ I
Sbjct: 98 LNSGDKITIGNANLI 112
>gi|296270778|ref|YP_003653410.1| FHA domain-containing protein [Thermobispora bispora DSM 43833]
gi|296093565|gb|ADG89517.1| FHA domain containing protein [Thermobispora bispora DSM 43833]
Length = 178
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + D +S H + V G W + DL S NGT LN L P +R D + GDC
Sbjct: 112 DLVLTDLTVSRVHAELRRVDGTWVVVDLGSMNGTRLNGWRL--LGPATVRPGDEVAFGDC 169
Query: 98 TTI 100
+
Sbjct: 170 AFL 172
>gi|408395846|gb|EKJ75018.1| hypothetical protein FPSE_04730 [Fusarium pseudograminearum CS3096]
Length = 297
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 181 WKLFIFKGQDIVDTIELSARSCWLVGREMSVVDLPAEHPSISKQHAVIQFRYVEKRNEFG 240
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR+ D I+ G T V M+
Sbjct: 241 DKVGKVKPYLIDLESANGTKLNDGKIPDSRYLELRDKDMIQFGHSTREYVVMLA 294
>gi|390566389|ref|ZP_10246779.1| FHA domain containing protein [Nitrolancetus hollandicus Lb]
gi|390170348|emb|CCF86125.1| FHA domain containing protein [Nitrolancetus hollandicus Lb]
Length = 150
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 16 SGETIEFKPGSKIRIGR----------IVRGNDVTIKDDG--ISSKHLIIESVSGKWTIQ 63
+G + +PGS + R I R TI+ D +SS+H + G+W +
Sbjct: 53 AGHLVVVQPGSSVLKARERLDLDPVTVIGRHPRATIRLDNGFVSSEHAQVSWNGGRWWLT 112
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
DL+S NGT LN ++ ++P ++R D I++GD
Sbjct: 113 DLNSTNGTMLNGRSV--SSPTEIRYGDVIEIGDI 144
>gi|386286589|ref|ZP_10063777.1| hypothetical protein DOK_04302 [gamma proteobacterium BDW918]
gi|385280386|gb|EIF44310.1| hypothetical protein DOK_04302 [gamma proteobacterium BDW918]
Length = 317
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+TI +S H + +SG+W ++DL S NGT +N+ L N P ++ D I+ G+
Sbjct: 77 DITIAKGLLSRHHAKLSYISGEWILEDLASTNGTCVNNRLL--NKPAAVKSGDVIRFGEA 134
Query: 98 T 98
Sbjct: 135 A 135
>gi|410667763|ref|YP_006920134.1| FHA domain-containing protein [Thermacetogenium phaeum DSM 12270]
gi|409105510|gb|AFV11635.1| FHA domain-containing protein [Thermacetogenium phaeum DSM 12270]
Length = 258
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRG-NDVTIKDDGISSKHLIIESVSGKWTIQD 64
+ L++V GP G+ I + + IGR +G N + + D S +H ++E G+ + D
Sbjct: 164 LDLLVVSGPDQGKRINLQGEERFYIGR--KGTNHLVLSDINASREHALLEWRGGELYLVD 221
Query: 65 LDSCNGTFLNST-----TLPPNTPFDLREN 89
L S NGTF+N L P F + EN
Sbjct: 222 LGSRNGTFINGVRIEQQRLLPGDQFLIGEN 251
>gi|258515523|ref|YP_003191745.1| FHA domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
gi|257779228|gb|ACV63122.1| FHA domain-containing protein [Desulfotomaculum acetoxidans DSM
771]
Length = 279
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + D IS +H ++E + I+DL+S NGTF+N + ++ D IKLG
Sbjct: 216 DIVLSDSSISRRHAVLEKTGKLYVIRDLNSTNGTFINGVKITEKI---IQPEDEIKLG-- 270
Query: 98 TTISVQMITMD 108
TTI I MD
Sbjct: 271 TTIC--YIRMD 279
>gi|300744050|ref|ZP_07073069.1| putative FHA domain protein [Rothia dentocariosa M567]
gi|311112620|ref|YP_003983842.1| FHA domain-containing protein [Rothia dentocariosa ATCC 17931]
gi|300379775|gb|EFJ76339.1| putative FHA domain protein [Rothia dentocariosa M567]
gi|310944114|gb|ADP40408.1| FHA domain protein [Rothia dentocariosa ATCC 17931]
Length = 158
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGND--VTIKDDGISSKHLIIESVSGKWTIQD 64
+L++ +G ++G ++ S + IGR ND V+++DD S +H + +W ++D
Sbjct: 66 RLVITKGVQAGAMMQLG-DSPVTIGR---ANDIEVSLQDDYASGRHARLFPQGSRWFLED 121
Query: 65 LDSCNGTFLNSTTL 78
L S NGTF+N+ L
Sbjct: 122 LGSTNGTFVNNQKL 135
>gi|405981029|ref|ZP_11039358.1| hypothetical protein HMPREF9240_00364 [Actinomyces neuii BVS029A5]
gi|404393048|gb|EJZ88105.1| hypothetical protein HMPREF9240_00364 [Actinomyces neuii BVS029A5]
Length = 143
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 3 PPGMKLIMV-RGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
P G L++V +GP SG + GR + +D+ + D +S KH I G WT
Sbjct: 42 PEGSALLVVHKGPNSGARFLLD-HNDTTAGRSTK-SDIFLDDVTVSRKHAIFTHQDGAWT 99
Query: 62 IQDLDSCNGTFLN 74
++D S NGT++N
Sbjct: 100 VRDAGSLNGTYVN 112
>gi|156742036|ref|YP_001432165.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233364|gb|ABU58147.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 154
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 2 EPPGMKLIMVRGPRSGETI--EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK 59
P L+++R +SG + F IGR + ++ + D +S +H +E +
Sbjct: 52 HSPYGHLVVLRSGQSGVAVGKMFPLSPSTIIGRSMEQCEIALNDSFLSQQHARLELRGNQ 111
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
W ++DL+S NGTF+N + T + E D I++G
Sbjct: 112 WVLEDLNSTNGTFVNDIEVRGATV--VEEGDIIRVG 145
>gi|389861767|ref|YP_006364006.1| hypothetical protein MODMU_0029 [Modestobacter marinus]
gi|388483969|emb|CCH85501.1| conserved protein of unknown function; FHA domain-containing
protein [Modestobacter marinus]
Length = 265
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+++V GP + +E GS + +GR D+ + D G+S KH ++ G T++DL
Sbjct: 173 HVLVVDGPGTKHVLE--QGSNV-LGRGTEA-DIRLPDTGVSRKHADVQLAGGVVTVEDLG 228
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
S NGT +N + DL + D I++G + Q
Sbjct: 229 STNGTLVNGRRVGRQ---DLADGDVIRIGHSVLVYRQ 262
>gi|425768349|gb|EKV06874.1| Cytoplasm to vacuole targeting Vps64, putative [Penicillium
digitatum Pd1]
gi|425770309|gb|EKV08782.1| Cytoplasm to vacuole targeting Vps64, putative [Penicillium
digitatum PHI26]
Length = 587
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+RIGR V +G +S +H + SGK I+D+ S NGTF+N L P
Sbjct: 19 LRIGRQTNAKTVPTPLNGFFDSKVLSRQHAEVWADKSGKIWIRDVKSSNGTFVNGHRLSP 78
Query: 81 ----NTPFDLRENDTIKLG 95
+ P +LRE+DT++LG
Sbjct: 79 ENRESEPHELRESDTLELG 97
>gi|328956234|ref|YP_004373567.1| FHA domain-containing protein [Coriobacterium glomerans PW2]
gi|328456558|gb|AEB07752.1| FHA domain containing protein [Coriobacterium glomerans PW2]
Length = 332
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR D+T++D +S +H + W+I+DL+S NGT +N+ P + LR
Sbjct: 262 IGRERSMTDITLRDPNVSRRHARLTFTGADWSIEDLNSTNGTHVNNR---PVSRSPLRSG 318
Query: 90 DTIKLG 95
D + G
Sbjct: 319 DLLTFG 324
>gi|310796320|gb|EFQ31781.1| FHA domain-containing protein [Glomerella graminicola M1.001]
Length = 344
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
+L + +G +T++ S +GR D+ + IS +H +I+
Sbjct: 228 WRLFVFKGADIVDTVDLSARSCWLVGREAAVVDLAAEHPSISKQHAVIQFRHVEKRNEFG 287
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN + + ++LR+ D IKLG T V M+
Sbjct: 288 DRIGKVKPYLIDLESANGTVLNGDKIADSRYYELRDKDMIKLGHSTREYVLMLA 341
>gi|359460901|ref|ZP_09249464.1| ABC transporter ATP-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 995
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
ET+ + + GR R N I +S H I+ SG W I+DL S NGT++N
Sbjct: 230 ETLVLRELKSLSFGRDPR-NTTVIDHPVVSRFHAQIDLKSGTWVIEDLHSSNGTYVNGRQ 288
Query: 78 LPPNTPFDLRENDTIKLG 95
L P LR DTI++G
Sbjct: 289 L--RNPQPLRPGDTIRIG 304
>gi|257784556|ref|YP_003179773.1| FHA domain-containing protein [Atopobium parvulum DSM 20469]
gi|257473063|gb|ACV51182.1| FHA domain containing protein [Atopobium parvulum DSM 20469]
Length = 138
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS---GKWTIQD 64
L +V+GP++G+T E +I +GR + + V + D +S H I+ + G TI+D
Sbjct: 40 LTIVKGPQTGQTFELN-LPQISLGRDPKSS-VFLNDMTVSRNHATIDLSNLSLGYATIED 97
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
LDS NGT+++ + T LR+ TI++G
Sbjct: 98 LDSLNGTWVDGAIINKAT---LRDGSTIQIG 125
>gi|120402090|ref|YP_951919.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119954908|gb|ABM11913.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1]
Length = 205
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 11/63 (17%)
Query: 22 FKP---------GSKIRIGRIVRGNDVTI-KDDGISSKHLIIESVSGKWTIQDLDSCNGT 71
FKP G ++ +G+ GN + + DD +S H + E++ W+I+D+ S NGT
Sbjct: 8 FKPTGRELVPLGGQRVTLGK-ASGNAIALEHDDTVSRLHAVFENLGSAWSIRDMGSRNGT 66
Query: 72 FLN 74
+LN
Sbjct: 67 YLN 69
>gi|426195907|gb|EKV45836.1| hypothetical protein AGABI2DRAFT_193770 [Agaricus bisporus var.
bisporus H97]
Length = 276
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP +L + +G E + + S IGR +D+ + S +H I+
Sbjct: 151 EPPEARKPTLSWRLYVFKGSEQVELLHIQRQSAYLIGRDRLVSDIAVDHPSCSKQHAAIQ 210
Query: 55 --------SVSG--KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ SG K + DL+S NGTF+N +P ++L+ D IK G
Sbjct: 211 HRYIQDKGTSSGTVKPFVIDLESTNGTFVNDEKIPSARFYELKAGDVIKFG 261
>gi|409078998|gb|EKM79360.1| hypothetical protein AGABI1DRAFT_113933 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 277
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP +L + +G E + + S IGR +D+ + S +H I+
Sbjct: 152 EPPEARKPTLSWRLYVFKGSEQVELLHIQRQSAYLIGRDRLVSDIAVDHPSCSKQHAAIQ 211
Query: 55 --------SVSG--KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ SG K + DL+S NGTF+N +P ++L+ D IK G
Sbjct: 212 HRYIQDKGTSSGTVKPFVIDLESTNGTFVNDEKIPSARFYELKAGDVIKFG 262
>gi|221632634|ref|YP_002521855.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
5159]
gi|221156736|gb|ACM05863.1| ABC transporter ATP-binding protein [Thermomicrobium roseum DSM
5159]
Length = 150
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIR---IGRIVRGNDVTIK--DDGISSKHLIIESVS 57
PPG ++V+ P S +PG+++ + I R T++ D IS++H +
Sbjct: 52 PPGH--LIVQSPGS---TGLRPGTRLPLEPVTVIGRHPSCTVRLDDAFISTEHAQLTWEQ 106
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
G+W I DL S NGT +N P P LR D I+LGD
Sbjct: 107 GRWWITDLKSTNGTRVNGK--PVTAPTGLRYGDVIELGDV 144
>gi|255934814|ref|XP_002558434.1| Pc12g16360 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583053|emb|CAP81263.1| Pc12g16360 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 763
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
+RIGR V +G +S +H + SGK I+D+ S NGTF+N L P
Sbjct: 193 LRIGRQTNAKTVPTPLNGFFDSKVLSRQHAEVWADKSGKIWIRDVKSSNGTFVNGHRLSP 252
Query: 81 ----NTPFDLRENDTIKLG 95
+ P +LRE DT++LG
Sbjct: 253 ENRESEPHELREGDTLELG 271
>gi|51246422|ref|YP_066306.1| hypothetical protein DP2570 [Desulfotalea psychrophila LSv54]
gi|50877459|emb|CAG37299.1| hypothetical protein DP2570 [Desulfotalea psychrophila LSv54]
Length = 405
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 12 RGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGT 71
RG SG+ K G+ + +GR ND+ + + +SS+H + V G W ++D S NGT
Sbjct: 260 RGVFSGQIFNLK-GAVLTVGR-TEENDIVLNEATVSSRHARLLVVGGGWKVEDSGSQNGT 317
Query: 72 FLNSTTLPPNTPFDLRENDTIKLG 95
+N P +L++ D I G
Sbjct: 318 IING---KPVESQELKDGDLISFG 338
>gi|400293341|ref|ZP_10795217.1| FHA domain protein [Actinomyces naeslundii str. Howell 279]
gi|399901582|gb|EJN84461.1| FHA domain protein [Actinomyces naeslundii str. Howell 279]
Length = 158
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ GP +G T+ P S I IGR + + D SS+H + G W ++DL
Sbjct: 66 RLVITEGPLAGSTVPLSPSSII-IGR-SPSCTLVLDDSYASSRHARVFPKDGAWWLEDLG 123
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
S NGT ++ P + +L N +++G T
Sbjct: 124 STNGTMMDGR--PVHGAVELPMNIPVRIGQTT 153
>gi|116192905|ref|XP_001222265.1| hypothetical protein CHGG_06170 [Chaetomium globosum CBS 148.51]
gi|88182083|gb|EAQ89551.1| hypothetical protein CHGG_06170 [Chaetomium globosum CBS 148.51]
Length = 684
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 4 PGMKLIMVRGPRSGETIE--FKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIE 54
P + L+ + G +TI + P + +RIGR V +G +S +H I
Sbjct: 169 PVLYLLSLNGSFERKTISVPYFPDT-LRIGRQTNAKTVPTPINGFFDSKVLSRQHAEIWA 227
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLGDCTTISVQMITMDSQ 110
+GK I+D+ S NGTF+N T L P + P +L+ D ++LG I + S+
Sbjct: 228 DTNGKIWIRDVKSSNGTFVNGTRLSPENRDSDPHELQTQDHLELG---------IDIVSE 278
Query: 111 DESVAKPKRNPRRQ 124
D+ RN R Q
Sbjct: 279 DQKTVTEMRNARLQ 292
>gi|242084608|ref|XP_002442729.1| hypothetical protein SORBIDRAFT_08g001890 [Sorghum bicolor]
gi|241943422|gb|EES16567.1| hypothetical protein SORBIDRAFT_08g001890 [Sorghum bicolor]
Length = 231
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
IE + +GR+ D+ + +S H +E G + DLDS NGT++N L
Sbjct: 114 IEIISDDAVTVGRVADKADIVLPIATVSGTHARLEKKGGSLLVTDLDSTNGTYINERRLN 173
Query: 80 PNTPFDLRENDTIKLGD 96
P P + + GD
Sbjct: 174 PGFPIAIDPGSFLIFGD 190
>gi|225387832|ref|ZP_03757596.1| hypothetical protein CLOSTASPAR_01602 [Clostridium asparagiforme
DSM 15981]
gi|225046075|gb|EEG56321.1| hypothetical protein CLOSTASPAR_01602 [Clostridium asparagiforme
DSM 15981]
Length = 468
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDD--GISSKHLIIESVSGKWTI 62
G++L V+G SG F ++RIGR ND+ G+S H + G+ I
Sbjct: 363 GIRLQCVKGAFSGR--RFALTGRVRIGRDPARNDLVFPSGTAGVSGVHCELLLQGGQIGI 420
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+DL S GTF+N L PN +LR D + +G
Sbjct: 421 RDLGSSYGTFVNGNRLKPNQLCELRPGDRVNIGSA 455
>gi|58270978|ref|XP_572645.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228904|gb|AAW45338.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 233
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE----------- 54
+L + +G + I S IGR D+ + S +H I+
Sbjct: 116 WRLYVFKGTEQIDLIHIYRQSCYLIGRDEVVTDIPVAHPSCSKQHAAIQYRQMTERNEYG 175
Query: 55 --SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ + K I DLDS NGTF+N +P + ++LR +D IK G
Sbjct: 176 DVATTIKPFIIDLDSTNGTFVNDIEIPKSRYYELRPSDVIKFG 218
>gi|197100808|ref|NP_001126963.1| E3 ubiquitin-protein ligase RNF8 [Pongo abelii]
gi|75061601|sp|Q5R4I2.1|RNF8_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|55733304|emb|CAH93334.1| hypothetical protein [Pongo abelii]
Length = 486
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLSVYSIHQGDYIQLG 109
>gi|400534782|ref|ZP_10798319.1| hypothetical protein MCOL_V210325 [Mycobacterium colombiense CECT
3035]
gi|400331140|gb|EJO88636.1| hypothetical protein MCOL_V210325 [Mycobacterium colombiense CECT
3035]
Length = 545
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I + RG D + D G+S +HL I + DL+S NGT +
Sbjct: 462 SGRTYQLREGSNI----VGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 517
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 518 NNA---PIQEWQLADGDVIRLGHSEII 541
>gi|444725540|gb|ELW66104.1| E3 ubiquitin-protein ligase RNF8 [Tupaia chinensis]
Length = 587
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + +R+ D I+LG
Sbjct: 52 ISRSHCVLKQNPEGQWTIMDNKSLNGVWLNGERLEPLKVYSIRQGDHIQLG 102
>gi|444913007|ref|ZP_21233164.1| FHA domain protein [Cystobacter fuscus DSM 2262]
gi|444716420|gb|ELW57271.1| FHA domain protein [Cystobacter fuscus DSM 2262]
Length = 314
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 4 PG--MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHL-IIESVSGKW 60
PG L + G G K G +I IGR D+ + +D +S KH I + +G+
Sbjct: 6 PGKTYALKFISGKYQGGEFPLKAGKQIVIGR-SSELDMVLVEDMVSRKHARITVNGAGQI 64
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKR 119
+I+DL S NGTF+N + +T L+E D I +G + Q + D++VAK +
Sbjct: 65 SIEDLGSTNGTFVNGEKVKQST---LKEGDRILIGTSILKLIHQGVGASEVDDAVAKQRL 121
Query: 120 NPRRQANVPGTSSVRATSGRKKAEAEPVETL 150
A +S +A+S K E P+ L
Sbjct: 122 E--EVAVQAARTSTKASSMTGKIEEIPLPDL 150
>gi|443305861|ref|ZP_21035649.1| ABC transporter ATP-binding protein [Mycobacterium sp. H4Y]
gi|442767425|gb|ELR85419.1| ABC transporter ATP-binding protein [Mycobacterium sp. H4Y]
Length = 901
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F G+ + IGR +R DV + IS HLI+ G+W
Sbjct: 4 MSPPAPPALTVR--YEGAERTFAAGNDVVIGRDLRA-DVRVAHPLISRTHLIVRYDQGRW 60
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG + N+ +P
Sbjct: 61 VAVDNGSLNGLYANNRRVP 79
>gi|397737019|ref|ZP_10503694.1| FHA domain protein [Rhodococcus sp. JVH1]
gi|396927095|gb|EJI94329.1| FHA domain protein [Rhodococcus sp. JVH1]
Length = 206
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 18 ETIEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNS 75
T++ P S ++ IGR + + +DD +S H ++E V WTI D S NGTF+N
Sbjct: 19 HTVDLSPTSARVTIGRSPGSDLLLTEDDEVSRLHAVLECVGSHWTILDDGLSRNGTFVNG 78
Query: 76 TTLPPNTPFDLRENDTIKLG 95
L LR+ D+I++G
Sbjct: 79 ERLAGRRR--LRQGDSIRIG 96
>gi|373456463|ref|ZP_09548230.1| FHA domain containing protein [Caldithrix abyssi DSM 13497]
gi|371718127|gb|EHO39898.1| FHA domain containing protein [Caldithrix abyssi DSM 13497]
Length = 273
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 29 RIGRIVRGNDVTIKDDG--ISSKHLIIESVS-GKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
RIGR + ND+ I D +S+ H IIE S G + + D+ S NGT +N +P N P
Sbjct: 4 RIGR-GKDNDLIIPSDFAKVSTHHCIIELQSDGNYYLTDIGSRNGTTINGQLIPQNKPQR 62
Query: 86 LRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATS 137
+ D I LG+ T+ + D+ ++ K RR+++ P S A S
Sbjct: 63 IGPTDEIILGNQYTL--------TWDQVLSLFKEKTRRRSSAPSAVSAPAPS 106
>gi|328722394|ref|XP_003247568.1| PREDICTED: hypothetical protein LOC100163438 isoform 2
[Acyrthosiphon pisum]
gi|328722396|ref|XP_001943772.2| PREDICTED: hypothetical protein LOC100163438 isoform 1
[Acyrthosiphon pisum]
Length = 379
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
V+ R+GE + K S GR ++ + + I++ IS H I + K+ ++D +SC
Sbjct: 16 FVQDTRTGEVYDVKTDSDFLFGRFLKSS-IVIEELYISRSHSTIRYENDKFLLKDNNSCT 74
Query: 70 GTFLN 74
GT+LN
Sbjct: 75 GTYLN 79
>gi|242090203|ref|XP_002440934.1| hypothetical protein SORBIDRAFT_09g017160 [Sorghum bicolor]
gi|241946219|gb|EES19364.1| hypothetical protein SORBIDRAFT_09g017160 [Sorghum bicolor]
Length = 492
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
+ DLDS NGTF+N + P ++L E DT+K G+ + V
Sbjct: 444 LMDLDSTNGTFINGNRIEPRRYYELFEKDTLKFGNSSREYV 484
>gi|390950361|ref|YP_006414120.1| FHA domain-containing protein [Thiocystis violascens DSM 198]
gi|390426930|gb|AFL73995.1| FHA domain-containing protein [Thiocystis violascens DSM 198]
Length = 531
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
P + L + G R GET+ IGR + +DD +S++H + + ++
Sbjct: 431 PALILTFMNGARRGETVRLVLNPAALIGRAGACSLRLAEDDEVSTQHARLSLQGRQAILE 490
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
DL S N T+LN +P + P +R+ D +++G
Sbjct: 491 DLGSTNQTWLNG--VPLSAPHPVRDGDVLRVG 520
>gi|322694676|gb|EFY86499.1| FHA domain protein SNIP1, putative [Metarhizium acridum CQMa 102]
Length = 270
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TI+ S +GR + D+ + IS +H +I+
Sbjct: 154 WKLFVFKGGDIVDTIDLSLRSCWLVGREMAVVDLPAEHPSISKQHAVIQFRYTEKRNEYG 213
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN + +P + +LR+ D I+ G+ T V M+
Sbjct: 214 DKIGRVKPYLIDLESANGTVLNDSKVPDSRYLELRDKDLIQFGNSTREYVVMLA 267
>gi|163847548|ref|YP_001635592.1| forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222525398|ref|YP_002569869.1| FHA domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163668837|gb|ABY35203.1| Forkhead-associated protein [Chloroflexus aurantiacus J-10-fl]
gi|222449277|gb|ACM53543.1| FHA domain containing protein [Chloroflexus sp. Y-400-fl]
Length = 153
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D+ + D +SS+H +E G W ++DL+S NGTFLN + T ++ D I++G
Sbjct: 87 DIVLNDSFLSSEHARLERRGGVWLLEDLNSTNGTFLNGFEVTGLT--EVHPGDAIRVG 142
>gi|433644140|ref|YP_007276709.1| FHA domain-containing protein [Mycobacterium smegmatis JS623]
gi|433300860|gb|AGB26679.1| FHA domain-containing protein [Mycobacterium smegmatis JS623]
Length = 353
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query: 35 RGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTI 92
RG++ TI+ D +S +HL +ES W ++D S NGT+L+ + T + + T+
Sbjct: 44 RGSEATIRIQDPRVSERHLRVESNGAHWALRDDGSTNGTYLDGALI---TARWVTDGLTV 100
Query: 93 KLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSV-RATSGRKKAEAEPVETLG 151
LGD I V T Q +RNP N PG + RA + R+ E +G
Sbjct: 101 HLGDANGIPV---TFSHQ-------RRNP----NDPGIARAGRAFAVRR-------EEMG 139
Query: 152 LEGGQIEDQSRINK-------KGRG--RNKNLQEM 177
++ D + I + KGR RN L ++
Sbjct: 140 FSQRKLSDDNVIGQSNLVAFEKGRSWPRNNTLAKL 174
>gi|333923481|ref|YP_004497061.1| FHA domain-containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749042|gb|AEF94149.1| FHA domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 164
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 24 PGSKIRIGRIVR-----GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78
PG R+G + R GN + S +H I G++ ++DL S N T+LN +
Sbjct: 73 PGDSFRLGELTRLGRGPGNHIAFTGAFASQEHAQIVFRQGQYWLEDLGSLNQTYLNE--M 130
Query: 79 PPNTPFDLRENDTIKLGDC 97
P P L D I++GD
Sbjct: 131 PVKRPTVLANGDRIRIGDV 149
>gi|302037296|ref|YP_003797618.1| hypothetical protein NIDE1969 [Candidatus Nitrospira defluvii]
gi|300605360|emb|CBK41693.1| conserved protein of unknown function, contains FHA domain
[Candidatus Nitrospira defluvii]
Length = 417
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 28 IRIGRIVRGNDVTIKDDG--ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+ IGR NDV ++D G +SS+H I + D+ S NGT +N L P +
Sbjct: 28 VTIGR-ASSNDVALEDPGRVVSSRHAEIRRRGEACVLVDVGSTNGTSVNERPLVPQREYP 86
Query: 86 LRENDTIKLGDCTTI 100
L+E D I +GD T +
Sbjct: 87 LQEGDRILIGDFTIL 101
>gi|262197354|ref|YP_003268563.1| FHA domain-containing protein [Haliangium ochraceum DSM 14365]
gi|262080701|gb|ACY16670.1| FHA domain containing protein [Haliangium ochraceum DSM 14365]
Length = 174
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 13 GPRS----GETIEFKPGSK---------IRIGRIVRGNDVTIKDDGISSKHLIIESVSGK 59
GPR+ G E P K I IGR NDV +KD +S H
Sbjct: 60 GPRATGTLGSDFEVYPLLKKLGAPFADMITIGR-TSNNDVVLKDVTVSRFHAYFRERESA 118
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
W + D S NGT L + L D++ D++++GD T
Sbjct: 119 WVVADAGSKNGTHLRGSELVARKEEDVQSGDSVRIGDIVT 158
>gi|118615941|ref|YP_904273.1| hypothetical protein MUL_0024 [Mycobacterium ulcerans Agy99]
gi|118568051|gb|ABL02802.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 532
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 449 SGRTYQLRDGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 504
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 505 NNA---PVQEWQLADGDVIRLGHSEII 528
>gi|227872965|ref|ZP_03991264.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841181|gb|EEJ51512.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 557
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 15 RSGETIEFKPGSKIRIGRIVRGNDVTIKDD-GISSKHLIIESVSGKWTIQDLDSCNGTFL 73
++GE I G+ R+G+ + D I D+ IS H I S +G++ +QD +S N +FL
Sbjct: 468 KNGERIPIT-GNIFRLGKEEKFVDYVIHDNEAISRSHANIISRNGQYFLQDNNSTNHSFL 526
Query: 74 NSTTLPPNTPFDLRENDTIKLGD 96
N N L++ +I+LG+
Sbjct: 527 NGQQCVSNVELPLQDKASIRLGN 549
>gi|383824254|ref|ZP_09979438.1| hypothetical protein MXEN_05490 [Mycobacterium xenopi RIVM700367]
gi|383337527|gb|EID15903.1| hypothetical protein MXEN_05490 [Mycobacterium xenopi RIVM700367]
Length = 509
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 426 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLTDLNSTNGTTV 481
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 482 NNA---PVQEWQLADGDVIRLGHSEII 505
>gi|395237896|ref|ZP_10415901.1| hypothetical protein BN46_1266 [Turicella otitidis ATCC 51513]
gi|423351829|ref|ZP_17329460.1| hypothetical protein HMPREF9719_01755 [Turicella otitidis ATCC
51513]
gi|394486765|emb|CCI83989.1| hypothetical protein BN46_1266 [Turicella otitidis ATCC 51513]
gi|404386176|gb|EJZ81347.1| hypothetical protein HMPREF9719_01755 [Turicella otitidis ATCC
51513]
Length = 158
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQ 63
P ++ +V GP +G ++ ++ +GR D + DD SS+H + W ++
Sbjct: 62 PATRITIVEGPLAGSHMDISTIDELVLGR-SEDCDFVLGDDYASSRHARVFRRGNHWFVE 120
Query: 64 DLDSCNGTFLN 74
DLDS NGT L+
Sbjct: 121 DLDSRNGTHLS 131
>gi|387876142|ref|YP_006306446.1| ABC transporter ATP-binding protein [Mycobacterium sp. MOTT36Y]
gi|386789600|gb|AFJ35719.1| ABC transporter ATP-binding protein [Mycobacterium sp. MOTT36Y]
Length = 902
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M PP + VR G F G+ + IGR +R DV + IS HLI+ G+W
Sbjct: 4 MSPPAPPALTVR--YEGAERTFAAGNDVVIGRDLRA-DVRVAHPLISRTHLIVRYDQGRW 60
Query: 61 TIQDLDSCNGTFLNSTTLP 79
D S NG + N+ +P
Sbjct: 61 VAVDNGSLNGLYANNRRVP 79
>gi|189199048|ref|XP_001935861.1| FHA domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982960|gb|EDU48448.1| FHA domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 467
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGETIEFKP---------GSKIRIGRIVRGNDVT-------------I 41
P ++ I + PR+G P + +R+GR +++
Sbjct: 49 PSIRFIPHQDPRAGRPSLIFPTINRTLPDEDAILRVGRYSERDNIPEISPNTPSAAAIGF 108
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
K +S KH + G W I+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 109 KSKVVSRKHCELWCKDGNWYIKDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 166
>gi|162452864|ref|YP_001615231.1| sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
gi|161163446|emb|CAN94751.1| Sigma-54 dependent transcriptional regulator [Sorangium cellulosum
So ce56]
Length = 477
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
DV ++D +SS+H I G+ ++DL S NGTF+N P L E D I+LG
Sbjct: 74 DVRLEDGWVSSRHARITRDGGQLCLEDLGSTNGTFVNGV---PRRSATLAEGDLIELGHT 130
Query: 98 TTI 100
+
Sbjct: 131 FFL 133
>gi|403509374|ref|YP_006641012.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
gi|402803000|gb|AFR10410.1| FHA domain protein [Nocardiopsis alba ATCC BAA-2165]
Length = 170
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + +G +G T++ I IGR + + I DD S +H + S +G+W ++DL+S
Sbjct: 79 LAVTQGSLAGTTVDLA-SQPILIGR-APDSTLVITDDYASGRHARVYSENGRWFVEDLNS 136
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLG 95
NGT+L L N P + I++G
Sbjct: 137 TNGTYLGQQKL--NRPQPITVGQPIRIG 162
>gi|310819370|ref|YP_003951728.1| Fis family sigma-54 dependent transcriptional regulator
[Stigmatella aurantiaca DW4/3-1]
gi|309392442|gb|ADO69901.1| Sigma-54 dependent transcriptional regulator, Fis family
[Stigmatella aurantiaca DW4/3-1]
Length = 454
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
L+++ R+G G +RIG+ NDV I +S HL++ ++ +QDL
Sbjct: 29 FHLVLLDTERAGTVFPLS-GEVLRIGKAPE-NDVVIDHPTVSRNHLLVRRQGDRFLVQDL 86
Query: 66 DSCNGTFLN 74
S NGTFL+
Sbjct: 87 GSTNGTFLD 95
>gi|340966725|gb|EGS22232.1| hypothetical protein CTHT_0017490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 324
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 3 PP--GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG-- 58
PP KL + +G +TI+ S IGR + D+ + IS +H +I+
Sbjct: 203 PPRDSWKLFVFKGDDVLDTIDLGTRSCWLIGRELAVVDLPAEHPSISKQHAVIQFRYTEK 262
Query: 59 -----------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN +P + +LR D I+ G T V M T
Sbjct: 263 RNEYGDKIGRVKPYLIDLESSNGTMLNHERIPESRYLELRNKDVIQFGSSTREYVLMYT 321
>gi|418047255|ref|ZP_12685343.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium rhodesiae JS60]
gi|353192925|gb|EHB58429.1| FHA modulated ABC efflux pump with fused ATPase and integral
membrane subunits [Mycobacterium rhodesiae JS60]
Length = 850
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P ++ VR G F G + +GR +R DV I IS HL++ G+W
Sbjct: 1 MSRPAAPVLTVR--YDGSERTFAAGHDVVVGRDLRA-DVRIAHPLISRAHLVLRYDHGRW 57
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D S NG F+N +P D+ + T+ +G+
Sbjct: 58 LAVDNGSLNGMFVNGRRVP---SVDITDGMTVNVGN 90
>gi|433629105|ref|YP_007262733.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070010]
gi|432160698|emb|CCK58026.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070010]
Length = 521
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
N+ P + L + D I+LG I V+M
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII-VRMY 521
>gi|31791197|ref|NP_853690.1| hypothetical protein Mb0020c [Mycobacterium bovis AF2122/97]
gi|31616782|emb|CAD92882.1| CONSERVED HYPOTHETICAL PROTEIN TB39.8 [Mycobacterium bovis
AF2122/97]
Length = 521
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|374327731|ref|YP_005085931.1| hypothetical protein P186_2287 [Pyrobaculum sp. 1860]
gi|356643000|gb|AET33679.1| hypothetical protein P186_2287 [Pyrobaculum sp. 1860]
Length = 151
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 17 GETIEFK---PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
G EFK PG+ + +GR V N+V + D +S +HL + S ++DL S NGT+L
Sbjct: 60 GRRFEFKAGSPGAVVTVGRAVE-NNVVVPDPAVSRRHLRLIVTSNGIVVEDLGSSNGTYL 118
>gi|350566200|ref|ZP_08934892.1| FHA domain/GGDEF domain protein [Peptoniphilus indolicus ATCC
29427]
gi|348663007|gb|EGY79628.1| FHA domain/GGDEF domain protein [Peptoniphilus indolicus ATCC
29427]
Length = 111
Score = 42.7 bits (99), Expect = 0.28, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D+ IKD +S +H+ I G + ++DL+S NGTFLN + + +LR D I +G
Sbjct: 45 DIAIKDKFVSKEHIEIREEDGVYFLEDLNSANGTFLNGEEV--HDIIELRNGDKIGVG 100
>gi|311742197|ref|ZP_07716007.1| FHA domain protein [Aeromicrobium marinum DSM 15272]
gi|311314690|gb|EFQ84597.1| FHA domain protein [Aeromicrobium marinum DSM 15272]
Length = 160
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQD 64
KL +V GP +G+++ I +GR G D I+ DD +S++H + +W ++D
Sbjct: 68 KLQIVDGPNAGQSVPLG-DQPILLGR---GTDAAIRLDDDYVSTRHARFATNGEQWFVED 123
Query: 65 LDSCNGTFLNSTTLPPNTPFDL 86
L S NGT+L + + TP L
Sbjct: 124 LGSTNGTYLGNQRITTPTPIGL 145
>gi|147678121|ref|YP_001212336.1| signaling protein [Pelotomaculum thermopropionicum SI]
gi|146274218|dbj|BAF59967.1| hypothetical signaling protein [Pelotomaculum thermopropionicum SI]
Length = 252
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP G+ + S I IGR G D+ + D +S +H +E G++TI DL S NGT
Sbjct: 166 GPDRGKVFKLGDISMI-IGR-REGCDIVLNDSSVSRRHARLELHRGRYTITDLGSTNGTM 223
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTI 100
+N + L D I LG I
Sbjct: 224 VNGVRINSKA---LEPGDVITLGTTVFI 248
>gi|441516385|ref|ZP_20998135.1| hypothetical protein GOHSU_02_02450 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441456971|dbj|GAC56096.1| hypothetical protein GOHSU_02_02450 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 858
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
ND+ + D S +H + SV G I+DL S NGTF+N + L END + +G+
Sbjct: 224 NDIVVADVLASRRHARLSSVGGALVIEDLGSVNGTFVNGHRITGRQ--QLAENDVVTIGN 281
Query: 97 CTTIS 101
++
Sbjct: 282 SDFVA 286
>gi|168041778|ref|XP_001773367.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675243|gb|EDQ61740.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 414
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 6 MKLIMVRGPRSGETIE---FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS--GKW 60
++L +V GP +G E + + IGR+ + ND+ + D +S KH++I + KW
Sbjct: 2 IQLEVVAGPVAGLRAEKQVVGSNAVLTIGRMPQ-NDLVLNDPEVSGKHIVISWNAKLSKW 60
Query: 61 TIQDLDSCNGTFLN----STTLPPNT-------PFDLRENDTIKLGDCTTISVQMI 105
+ D+ S NGT +N S + N+ P L DTI LG + + V ++
Sbjct: 61 ELVDMGSLNGTLVNSRPASVSHKANSIVRQRGRPTPLSNGDTITLGSSSNVLVSIL 116
>gi|147790066|emb|CAN75988.1| hypothetical protein VITISV_012193 [Vitis vinifera]
Length = 574
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRI----GRIVRGNDVTIKDDGISSKHLIIESVSGK-- 59
+ L ++ GP G+ + R+ GR V +D+ +KD +S KH +I K
Sbjct: 177 LTLEVISGPSRGDRCSISSXNTSRLPLTLGR-VSPSDLLVKDSEVSGKHALINWNLNKLK 235
Query: 60 WTIQDLDSCNGTFLNSTTL-PPNT-------PFDLRENDTIKLGDCTTISVQM 104
W + D+ S NGT LNS ++ P++ P +L D I LG + I VQ+
Sbjct: 236 WELVDMGSLNGTLLNSQSVNHPDSGMRHWGDPIELASGDIITLGTTSKIRVQI 288
>gi|148653841|ref|YP_001280934.1| FHA domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572925|gb|ABQ94984.1| FHA domain containing protein [Psychrobacter sp. PRwf-1]
Length = 405
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 20 IEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
+E K+ +GR + NDV + +S +H + V + +QDL S NGT +N L
Sbjct: 24 LELNVDHKLTVGR-GQDNDVVLGSKQVSRQHAELTVVDDELLVQDLGSSNGTLVNDVRLE 82
Query: 80 PNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPK 118
P+ P L +D + + Q +DS S +P+
Sbjct: 83 PHQPKSLVVDDVVTFAAFSFQVKQTQPLDSAAVSSLEPE 121
>gi|15607162|ref|NP_214534.1| Conserved protein with FHA domain, FhaA [Mycobacterium tuberculosis
H37Rv]
gi|148659779|ref|YP_001281302.1| hypothetical protein MRA_0022 [Mycobacterium tuberculosis H37Ra]
gi|148821211|ref|YP_001285965.1| hypothetical protein TBFG_10020 [Mycobacterium tuberculosis F11]
gi|167968151|ref|ZP_02550428.1| hypothetical protein MtubH3_08992 [Mycobacterium tuberculosis
H37Ra]
gi|253796935|ref|YP_003029936.1| hypothetical protein TBMG_00020 [Mycobacterium tuberculosis KZN
1435]
gi|254548952|ref|ZP_05139399.1| hypothetical protein Mtube_00545 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297632491|ref|ZP_06950271.1| hypothetical protein MtubK4_00115 [Mycobacterium tuberculosis KZN
4207]
gi|297729462|ref|ZP_06958580.1| hypothetical protein MtubKR_00125 [Mycobacterium tuberculosis KZN
R506]
gi|306778312|ref|ZP_07416649.1| hypothetical protein TMAG_00691 [Mycobacterium tuberculosis
SUMu001]
gi|306778842|ref|ZP_07417179.1| hypothetical protein TMBG_02485 [Mycobacterium tuberculosis
SUMu002]
gi|306782631|ref|ZP_07420953.1| hypothetical protein TMCG_03733 [Mycobacterium tuberculosis
SUMu003]
gi|306786997|ref|ZP_07425319.1| hypothetical protein TMDG_01904 [Mycobacterium tuberculosis
SUMu004]
gi|306791555|ref|ZP_07429857.1| hypothetical protein TMEG_00444 [Mycobacterium tuberculosis
SUMu005]
gi|306795618|ref|ZP_07433920.1| hypothetical protein TMFG_02183 [Mycobacterium tuberculosis
SUMu006]
gi|306801594|ref|ZP_07438262.1| hypothetical protein TMHG_03017 [Mycobacterium tuberculosis
SUMu008]
gi|306805801|ref|ZP_07442469.1| hypothetical protein TMGG_01491 [Mycobacterium tuberculosis
SUMu007]
gi|306970199|ref|ZP_07482860.1| hypothetical protein TMIG_00301 [Mycobacterium tuberculosis
SUMu009]
gi|306974432|ref|ZP_07487093.1| hypothetical protein TMJG_01201 [Mycobacterium tuberculosis
SUMu010]
gi|307082140|ref|ZP_07491310.1| hypothetical protein TMKG_01199 [Mycobacterium tuberculosis
SUMu011]
gi|307082480|ref|ZP_07491593.1| hypothetical protein TMLG_00752 [Mycobacterium tuberculosis
SUMu012]
gi|313656791|ref|ZP_07813671.1| hypothetical protein MtubKV_00125 [Mycobacterium tuberculosis KZN
V2475]
gi|375294221|ref|YP_005098488.1| hypothetical protein TBSG_00020 [Mycobacterium tuberculosis KZN
4207]
gi|385996792|ref|YP_005915090.1| hypothetical protein MTCTRI2_0022 [Mycobacterium tuberculosis
CTRI-2]
gi|386003110|ref|YP_005921389.1| hypothetical protein MRGA423_00140 [Mycobacterium tuberculosis
RGTB423]
gi|392384741|ref|YP_005306370.1| TB39.8 [Mycobacterium tuberculosis UT205]
gi|392430429|ref|YP_006471473.1| hypothetical protein TBXG_000020 [Mycobacterium tuberculosis KZN
605]
gi|397671800|ref|YP_006513334.1| hypothetical protein RVBD_0020c [Mycobacterium tuberculosis H37Rv]
gi|81345707|sp|P71590.1|FHAA_MYCTU RecName: Full=FHA domain-containing protein FhaA
gi|148503931|gb|ABQ71740.1| hypothetical protein MRA_0022 [Mycobacterium tuberculosis H37Ra]
gi|148719738|gb|ABR04363.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis
F11]
gi|253318438|gb|ACT23041.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|308213457|gb|EFO72856.1| hypothetical protein TMAG_00691 [Mycobacterium tuberculosis
SUMu001]
gi|308328175|gb|EFP17026.1| hypothetical protein TMBG_02485 [Mycobacterium tuberculosis
SUMu002]
gi|308332479|gb|EFP21330.1| hypothetical protein TMCG_03733 [Mycobacterium tuberculosis
SUMu003]
gi|308336291|gb|EFP25142.1| hypothetical protein TMDG_01904 [Mycobacterium tuberculosis
SUMu004]
gi|308339895|gb|EFP28746.1| hypothetical protein TMEG_00444 [Mycobacterium tuberculosis
SUMu005]
gi|308343910|gb|EFP32761.1| hypothetical protein TMFG_02183 [Mycobacterium tuberculosis
SUMu006]
gi|308347694|gb|EFP36545.1| hypothetical protein TMGG_01491 [Mycobacterium tuberculosis
SUMu007]
gi|308351611|gb|EFP40462.1| hypothetical protein TMHG_03017 [Mycobacterium tuberculosis
SUMu008]
gi|308352318|gb|EFP41169.1| hypothetical protein TMIG_00301 [Mycobacterium tuberculosis
SUMu009]
gi|308356218|gb|EFP45069.1| hypothetical protein TMJG_01201 [Mycobacterium tuberculosis
SUMu010]
gi|308360208|gb|EFP49059.1| hypothetical protein TMKG_01199 [Mycobacterium tuberculosis
SUMu011]
gi|308367770|gb|EFP56621.1| hypothetical protein TMLG_00752 [Mycobacterium tuberculosis
SUMu012]
gi|328456726|gb|AEB02149.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|344217838|gb|AEM98468.1| hypothetical protein MTCTRI2_0022 [Mycobacterium tuberculosis
CTRI-2]
gi|378543292|emb|CCE35563.1| TB39.8 [Mycobacterium tuberculosis UT205]
gi|380723598|gb|AFE11393.1| hypothetical protein MRGA423_00140 [Mycobacterium tuberculosis
RGTB423]
gi|392051838|gb|AFM47396.1| hypothetical protein TBXG_000020 [Mycobacterium tuberculosis KZN
605]
gi|395136704|gb|AFN47863.1| hypothetical protein RVBD_0020c [Mycobacterium tuberculosis H37Rv]
gi|444893489|emb|CCP42742.1| Conserved protein with FHA domain, FhaA [Mycobacterium tuberculosis
H37Rv]
Length = 527
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 444 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 499
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 500 NNA---PVQEWQLADGDVIRLGHSEII 523
>gi|347818975|ref|ZP_08872409.1| FHA domain-containing protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 132
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I D +S +H +I V + I+DL S NGT++N+ + T LR+ DT+++G
Sbjct: 28 NDMAIDDLAVSGEHAVIHMVGREVQIEDLGSTNGTYVNAKPVKRQT---LRDGDTLEVG 83
>gi|323701795|ref|ZP_08113466.1| FHA domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|323533331|gb|EGB23199.1| FHA domain containing protein [Desulfotomaculum nigrificans DSM
574]
Length = 164
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 24 PGSKIRIGRIVR-----GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78
PG R+G + R GN + S +H I G++ ++DL S N T+LN +
Sbjct: 73 PGDSFRLGELTRLGRGPGNHIAFTGAFASQEHAQIVFRQGQYWLEDLGSLNQTYLNE--M 130
Query: 79 PPNTPFDLRENDTIKLGDC 97
P P L D I++GD
Sbjct: 131 PVKRPTVLANGDRIRIGDV 149
>gi|149923797|ref|ZP_01912189.1| Pkn9 associate protein 1 [Plesiocystis pacifica SIR-1]
gi|149815368|gb|EDM74910.1| Pkn9 associate protein 1 [Plesiocystis pacifica SIR-1]
Length = 237
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I IGR GND+ ++ GIS KH I V + ++DL S NGT+LN + P +
Sbjct: 23 ITIGR-REGNDLRLQTAGISGKHCKISRVGNGFQLEDLGSTNGTYLNRRKV--VQPMPIN 79
Query: 88 ENDTIKLGDCTTISVQMITMDSQDESVAKPKRNP 121
D I + T + D + A+P+ NP
Sbjct: 80 PGDEIVVARWTMKVI-------MDGAGAQPQANP 106
>gi|322708124|gb|EFY99701.1| FHA domain protein SNIP1, putative [Metarhizium anisopliae ARSEF
23]
Length = 306
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
KL + +G +TI+ S +GR + D+ + IS +H +I+
Sbjct: 190 WKLFVFKGGDIVDTIDLSLRSCWLVGREMAVVDLPAEHPSISKQHAVIQFRYTEKRNEYG 249
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMIT 106
K + DL+S NGT LN + +P + +LR+ D I+ G+ T V M+
Sbjct: 250 DKIGRVKPYLIDLESANGTVLNDSKVPDSRYLELRDKDMIQFGNSTREYVVMLA 303
>gi|225678816|gb|EEH17100.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 759
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +R+GR V +G +S +H + +GK I+D+ S NGT
Sbjct: 182 TVPYFP-EVLRVGRQTNAKTVPTPINGYFDSKVLSRQHAEVWADRAGKIWIRDVKSSNGT 240
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 241 FVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|289756079|ref|ZP_06515457.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289696666|gb|EFD64095.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length = 521
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|121710702|ref|XP_001272967.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus
clavatus NRRL 1]
gi|119401117|gb|EAW11541.1| cytoplasm to vacuole targeting Vps64, putative [Aspergillus
clavatus NRRL 1]
Length = 745
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 2 EPPGMKLIMVRGPRSGE------TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSK 49
EPP + ++ P +G + F P +RIGR V +G +S +
Sbjct: 160 EPPAILTLL---PMNGTFEKKQINVPFYP-EVLRIGRQTNVKTVPTPVNGYFDSKVLSRQ 215
Query: 50 HL-IIESVSGKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
H I +GK I+D+ S NGTF+N L P + P +LRE+DT++LG
Sbjct: 216 HAEIWADKTGKIWIRDVKSSNGTFVNGQRLSPENRESEPHELRESDTLELG 266
>gi|167039704|ref|YP_001662689.1| FHA domain-containing protein [Thermoanaerobacter sp. X514]
gi|300915047|ref|ZP_07132362.1| FHA domain containing protein [Thermoanaerobacter sp. X561]
gi|307724970|ref|YP_003904721.1| FHA domain containing protein [Thermoanaerobacter sp. X513]
gi|326389759|ref|ZP_08211324.1| FHA domain containing protein [Thermoanaerobacter ethanolicus JW
200]
gi|166853944|gb|ABY92353.1| FHA domain containing protein [Thermoanaerobacter sp. X514]
gi|300888771|gb|EFK83918.1| FHA domain containing protein [Thermoanaerobacter sp. X561]
gi|307582031|gb|ADN55430.1| FHA domain containing protein [Thermoanaerobacter sp. X513]
gi|325994241|gb|EGD52668.1| FHA domain containing protein [Thermoanaerobacter ethanolicus JW
200]
Length = 134
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ I+ +S++H II ++ IQDL+S NGTF+N + + ND I LGD
Sbjct: 71 DIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRIKRIAK--ITNNDVITLGDV 128
>gi|357389820|ref|YP_004904660.1| hypothetical protein KSE_28930 [Kitasatospora setae KM-6054]
gi|311896296|dbj|BAJ28704.1| hypothetical protein KSE_28930 [Kitasatospora setae KM-6054]
Length = 909
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWT 61
P +L +V GP +G G +IRIGR DV + D +S HL + + G+ T
Sbjct: 98 PAAAELRVVGGPDAGGVHRLH-GERIRIGRSTE-ADVPLDDPDVSRLHLALHLAADGRAT 155
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
++DL S NGT L+ L + DL +++G+ T
Sbjct: 156 VRDLGSTNGTRLDEQWLREDA-ADLAPGALLRIGEST 191
>gi|357014189|ref|ZP_09079188.1| putative winged helix family two component transcriptional
regulator [Paenibacillus elgii B69]
Length = 241
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 8 LIMVRG--PRSGETIEFKPGSKIRIGRIVRGN--DVTIKDDGISSKHLIIESVSGKWTIQ 63
L ++RG RSG + + IGR D + IS KH++I + +
Sbjct: 18 LYVIRGEPFRSGTCLNLIADETV-IGRASNSYSPDFAFSNAFISRKHIVIRKEEERAVLY 76
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
DL S +GT +N + PN P+ L+ D +KL T+
Sbjct: 77 DLGSTHGTEINGVIVEPNQPYPLKSFDIVKLAKGMTV 113
>gi|223949229|gb|ACN28698.1| unknown [Zea mays]
gi|414882091|tpg|DAA59222.1| TPA: FHA domain containing protein [Zea mays]
Length = 212
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+ + +GR+ D+ + +S H +E G + DLDS NGT++N L P P
Sbjct: 105 TAVTVGRVADKADIVLPVATVSGAHARLEKKGGSLLVTDLDSTNGTYINERRLNPGFPAS 164
Query: 86 LRENDTIKLGDC 97
+ + GD
Sbjct: 165 VDPGSLLIFGDI 176
>gi|162450750|ref|YP_001613117.1| FHA domain-containing protein [Sorangium cellulosum So ce56]
gi|161161332|emb|CAN92637.1| FHA domain protein [Sorangium cellulosum So ce56]
Length = 309
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG-ISSKHLIIESVSGKWTIQ 63
G+ L ++ GP +G+T + +GR +D++I DG +S+ H +E + G + ++
Sbjct: 8 GLVLRVISGPLAGQTARIPGDRPLLVGRAPE-SDLSITSDGELSALHFSVEQIDGSYLLR 66
Query: 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQ 103
DL S NGT +N LR+ D I+ G V+
Sbjct: 67 DLGSRNGTQVNRER---AREVSLRDGDEIRAGGTVFAVVR 103
>gi|121635930|ref|YP_976153.1| hypothetical protein BCG_0050c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224988403|ref|YP_002643070.1| hypothetical protein JTY_0020 [Mycobacterium bovis BCG str. Tokyo
172]
gi|378769763|ref|YP_005169496.1| hypothetical protein BCGMEX_0020c [Mycobacterium bovis BCG str.
Mexico]
gi|449061998|ref|YP_007429081.1| hypothetical protein K60_000230 [Mycobacterium bovis BCG str. Korea
1168P]
gi|121491577|emb|CAL70034.1| Conserved hypothetical protein TB39.8 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224771516|dbj|BAH24322.1| hypothetical protein JTY_0020 [Mycobacterium bovis BCG str. Tokyo
172]
gi|341599946|emb|CCC62613.1| conserved hypothetical protein TB39.8 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356592084|gb|AET17313.1| Hypothetical protein BCGMEX_0020c [Mycobacterium bovis BCG str.
Mexico]
gi|449030506|gb|AGE65933.1| hypothetical protein K60_000230 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 521
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|15839394|ref|NP_334431.1| hypothetical protein MT0023 [Mycobacterium tuberculosis CDC1551]
gi|254233424|ref|ZP_04926750.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis
C]
gi|254366480|ref|ZP_04982524.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis
str. Haarlem]
gi|289567905|ref|ZP_06448132.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289747790|ref|ZP_06507168.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289760117|ref|ZP_06519495.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294995633|ref|ZP_06801324.1| hypothetical protein Mtub2_14287 [Mycobacterium tuberculosis 210]
gi|298527418|ref|ZP_07014827.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|385989555|ref|YP_005907853.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385993145|ref|YP_005911443.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|422815199|ref|ZP_16863417.1| hypothetical protein TMMG_00439 [Mycobacterium tuberculosis
CDC1551A]
gi|424806505|ref|ZP_18231936.1| hypothetical protein TBPG_03746 [Mycobacterium tuberculosis W-148]
gi|433633033|ref|YP_007266660.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070017]
gi|13879064|gb|AAK44245.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|124603217|gb|EAY61492.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis
C]
gi|134151992|gb|EBA44037.1| conserved hypothetical protein TB39.8 [Mycobacterium tuberculosis
str. Haarlem]
gi|289541658|gb|EFD45307.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289688318|gb|EFD55806.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289715681|gb|EFD79693.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298497212|gb|EFI32506.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|323717359|gb|EGB26564.1| hypothetical protein TMMG_00439 [Mycobacterium tuberculosis
CDC1551A]
gi|326905781|gb|EGE52714.1| hypothetical protein TBPG_03746 [Mycobacterium tuberculosis W-148]
gi|339293099|gb|AEJ45210.1| hypothetical protein CCDC5079_0020 [Mycobacterium tuberculosis
CCDC5079]
gi|339296748|gb|AEJ48858.1| hypothetical protein CCDC5180_0021 [Mycobacterium tuberculosis
CCDC5180]
gi|379026110|dbj|BAL63843.1| hypothetical protein ERDMAN_0025 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|432164626|emb|CCK62088.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070017]
gi|440579466|emb|CCG09869.1| hypothetical protein TB39,8 [Mycobacterium tuberculosis 7199-99]
Length = 521
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|302673180|ref|XP_003026277.1| hypothetical protein SCHCODRAFT_62525 [Schizophyllum commune H4-8]
gi|300099958|gb|EFI91374.1| hypothetical protein SCHCODRAFT_62525 [Schizophyllum commune H4-8]
Length = 383
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I P +K++IGR + +G +S +H + +
Sbjct: 15 PALYLYPLNDSFIPKHIYLPPNTKVKIGRQTNAKTAPGERNGYFDSKVLSRQHAEVWEEN 74
Query: 58 GKWTIQDLDSCNGTFLNSTTLP----PNTPFDLRENDTIKLG 95
GK I+D+ S NGTF+N L + P+DL+ +D ++ G
Sbjct: 75 GKIYIRDVKSSNGTFINGDRLSGEGMESEPYDLKSDDIVEFG 116
>gi|290962822|ref|YP_003494004.1| ABC transporter ATP-binding protein [Streptomyces scabiei 87.22]
gi|260652348|emb|CBG75481.1| putative ABC transport system ATP-binding component [Streptomyces
scabiei 87.22]
Length = 775
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
SG T+ P +GR +DV + DD +S H ++ + +G WTI+D S NGT+
Sbjct: 19 SGSTV-MTPSHTYHVGRDPL-SDVVLDDDRVSWHHAVLRAEAGHWTIEDEHSTNGTY 73
>gi|289572596|ref|ZP_06452823.1| FHA domain-containing protein [Mycobacterium tuberculosis K85]
gi|339630103|ref|YP_004721745.1| hypothetical protein MAF_00200 [Mycobacterium africanum GM041182]
gi|289537027|gb|EFD41605.1| FHA domain-containing protein [Mycobacterium tuberculosis K85]
gi|339329459|emb|CCC25094.1| putative uncharacterized protein [Mycobacterium africanum GM041182]
Length = 521
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|384248851|gb|EIE22334.1| protein serine/threonine phosphatase 2C [Coccomyxa subellipsoidea
C-169]
Length = 887
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 6 MKLIMVRGPRSGETIEFKPG-SKIRIGRIVRGNDVTIKDDGISSKHLII--ESVSGKWTI 62
++L + GP SG + G +++ +GR+ GN + + D+ +S KH+ I + W +
Sbjct: 456 IRLDVTAGPSSGHSYTLDEGLTEVTLGRL-GGNTMAVNDNEVSGKHVAIRWDPSCRCWQV 514
Query: 63 QDLDSCNGTFLNSTTLPPNT-----PFDLRENDTIKLG 95
DL S NGT LN + + + L + D ++LG
Sbjct: 515 MDLGSLNGTTLNGRIISTSNRRRGRLWRLNDGDQLQLG 552
>gi|256750638|ref|ZP_05491524.1| FHA domain containing protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750478|gb|EEU63496.1| FHA domain containing protein [Thermoanaerobacter ethanolicus
CCSD1]
Length = 134
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ I+ +S++H II ++ IQDL+S NGTF+N + + ND I LGD
Sbjct: 71 DIVIESPYVSARHAIIRKRGKRFYIQDLNSTNGTFVNGKRIKRIAK--ITNNDVITLGDV 128
>gi|284988668|ref|YP_003407222.1| FHA domain containing protein [Geodermatophilus obscurus DSM 43160]
gi|284061913|gb|ADB72851.1| FHA domain containing protein [Geodermatophilus obscurus DSM 43160]
Length = 154
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ GP +G I I IGR + + + DD SS+H + + G+W ++DL S
Sbjct: 63 LVVTAGPLTGTKITLS-DQPILIGR-ADDSTLVLTDDFASSRHARLTNRGGQWYVEDLGS 120
Query: 68 CNGTFLN 74
NGT+L+
Sbjct: 121 TNGTYLD 127
>gi|226508540|ref|NP_001150384.1| FHA domain containing protein [Zea mays]
gi|195638808|gb|ACG38872.1| FHA domain containing protein [Zea mays]
Length = 213
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+ + +GR+ D+ + +S H +E G + DLDS NGT++N L P P
Sbjct: 106 TAVTVGRVADKADIVLPVATVSGAHARLEKKGGSLLVTDLDSTNGTYINERRLNPGFPAS 165
Query: 86 LRENDTIKLGDC 97
+ + GD
Sbjct: 166 VDPGSLLIFGDI 177
>gi|449131956|ref|ZP_21768130.1| FHA domain containing protein [Rhodopirellula europaea 6C]
gi|448888765|gb|EMB19067.1| FHA domain containing protein [Rhodopirellula europaea 6C]
Length = 243
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
K + +S +H I+ G+ +QDL S NGTF+N LP + L++ D +++G
Sbjct: 37 KSESVSRRHCILAIKDGRVLVQDLKSRNGTFVNDKRLPADKAKVLKDGDLLRVG 90
>gi|392955400|ref|ZP_10320931.1| transcriptional regulator CadC [Bacillus macauensis ZFHKF-1]
gi|391878327|gb|EIT86916.1| transcriptional regulator CadC [Bacillus macauensis ZFHKF-1]
Length = 220
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 27 KIRIGR--IVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
KI +GR + D+ + +S H ++ + G+ ++DL+S +GTF+N + P
Sbjct: 22 KIIVGRSSVDSTPDIILSSPYVSRTHCMLTYLEGRIYVKDLNSLHGTFINGERISPGVEI 81
Query: 85 DLRENDTIKLGDCTTISVQMITMDS 109
+LR D + L IS+++ MD+
Sbjct: 82 ELRLGDVLTLA-YDRISIEIAEMDA 105
>gi|386289294|ref|ZP_10066428.1| FHA domain-containing protein [gamma proteobacterium BDW918]
gi|385277674|gb|EIF41652.1| FHA domain-containing protein [gamma proteobacterium BDW918]
Length = 214
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
++ IGR ND+ I++ +S +H +E+ + DL S NGT +N P T L
Sbjct: 22 RVTIGRAA-DNDICIENLAVSGRHAAVETFQNDSYLVDLGSTNGTLVNGN---PVTRHAL 77
Query: 87 RENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEP 146
R D I +G + + D+ V K T ++R + AEA P
Sbjct: 78 RSGDYITIGKHSLTYHGLQRTAETDDEVEK-------------TIAIR--PAMRSAEAAP 122
Query: 147 VETLGL 152
V LG
Sbjct: 123 VALLGY 128
>gi|340625053|ref|YP_004743505.1| hypothetical protein MCAN_00191 [Mycobacterium canettii CIPT
140010059]
gi|433625111|ref|YP_007258740.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140060008]
gi|340003243|emb|CCC42360.1| conserved hypothetical protein TB39.8 [Mycobacterium canettii CIPT
140010059]
gi|432152717|emb|CCK49923.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140060008]
Length = 521
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|433640148|ref|YP_007285907.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070008]
gi|432156696|emb|CCK53961.1| Conserved hypothetical protein with Fha domain, TB39.8
[Mycobacterium canettii CIPT 140070008]
Length = 521
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|226293651|gb|EEH49071.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 759
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ + P +R+GR V +G +S +H + +GK I+D+ S NGT
Sbjct: 182 TVPYFP-EVLRVGRQTNAKTVPTPINGYFDSKVLSRQHAEVWADRAGKIWIRDVKSSNGT 240
Query: 72 FLNSTTLPP----NTPFDLRENDTIKLG 95
F+N L P + P +LRE+DT++LG
Sbjct: 241 FVNGQRLSPENRDSEPHELREHDTLELG 268
>gi|452953680|gb|EME59098.1| hypothetical protein G352_20941 [Rhodococcus ruber BKS 20-38]
Length = 207
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 20 IEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNSTT 77
E PGS ++ IGR + D+ +S H ++E + WTI D S NGTFLN
Sbjct: 22 FELSPGSPRVTIGRAPTSDVAFTGDNEVSRLHAVVEWIGTHWTILDDGLSRNGTFLNGER 81
Query: 78 LPPNTPFDLRENDTIKLG 95
+ LRE D+I++G
Sbjct: 82 IAGRR--RLREGDSIRIG 97
>gi|414588448|tpg|DAA39019.1| TPA: hypothetical protein ZEAMMB73_658424 [Zea mays]
Length = 1096
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
T+ DL S +GT+++ +PPNTP DL DT++LG
Sbjct: 86 TVTDLHSVHGTWVSGRRIPPNTPVDLATGDTLRLG 120
>gi|402220806|gb|EJU00876.1| SMAD/FHA domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 220
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--------- 55
G +L + + E + S +GR +D+ I S +H +I+
Sbjct: 103 GWRLYVFKHDVQVEMLSIGRQSAYLVGRDRVVSDIPIDHPSCSKQHAVIQYRCITSKNPY 162
Query: 56 ----VSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ K I DLDS NGTF+N +P + ++L+E D I+ G T
Sbjct: 163 GDSQSTVKPFIIDLDSTNGTFVNGQEVPKSRFYELKEKDVIRFGQST 209
>gi|330914543|ref|XP_003296679.1| hypothetical protein PTT_06843 [Pyrenophora teres f. teres 0-1]
gi|311331066|gb|EFQ95230.1| hypothetical protein PTT_06843 [Pyrenophora teres f. teres 0-1]
Length = 467
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGETIEFKP---------GSKIRIGR-------------IVRGNDVTI 41
P ++ I + PR+G P + +R+GR + +
Sbjct: 49 PSIRFIPHQDPRAGRPSLIFPTINRTLPDEDAILRVGRYSERDNTPDISPNVPSAAAIGF 108
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
K +S KH + G W I+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 109 KSKVVSRKHCELWCKDGNWYIKDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 166
>gi|374313069|ref|YP_005059499.1| forkhead-associated protein [Granulicella mallensis MP5ACTX8]
gi|358755079|gb|AEU38469.1| Forkhead-associated protein [Granulicella mallensis MP5ACTX8]
Length = 718
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 8 LIMVRGPRSGETIEFKPGSK--IRIGRIVRG----NDVTIKD--DGISSKHLIIESVSGK 59
L + RG SG T P K +RIG + + ND+ I+D IS H I G+
Sbjct: 609 LEITRGLDSGRT---HPIDKDIVRIGAVAQDGGQKNDIVIRDVEHAISRFHCEIVKRDGQ 665
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+ DL+S NGT LN + P +P LR I L +
Sbjct: 666 LYVNDLNSSNGTRLNGAQIKPGSPEPLRRGSNILLANA 703
>gi|451995463|gb|EMD87931.1| hypothetical protein COCHEDRAFT_1183047 [Cochliobolus
heterostrophus C5]
Length = 426
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 26/118 (22%)
Query: 4 PGMKLIMVRGPRSGETIEFKP---------GSKIRIGRIVRGND-------------VTI 41
P ++ I + PR+G P + +R+GR ++ +
Sbjct: 46 PSIRFIPHQDPRAGRPSLIFPTITRTLPDESAVLRVGRYSERDNAPEISSNTPSAAAIGF 105
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNT---PFDLRENDTIKLG 95
K +S KH + G W I+D+ S +GTFLN L PN PF +++ D I+LG
Sbjct: 106 KSKVVSRKHCELWCKDGSWYIKDVKSSSGTFLNHIRLSQPNVESKPFRIKDGDIIQLG 163
>gi|320103469|ref|YP_004179060.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
gi|319750751|gb|ADV62511.1| diguanylate cyclase [Isosphaera pallida ATCC 43644]
Length = 367
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ G G+ I PG + IGR R + + + +S H I +QDL S
Sbjct: 55 LLVQHGGLMGQLIRLNPGVSL-IGRDAR-HPIWFRSLAVSRDHARIHVRDDAVILQDLKS 112
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESV 114
NGT+L L P P LREND I C + V++ + S+
Sbjct: 113 RNGTYLRGHRLGPE-PVKLRENDII----CISPEVRLKFLHHSPRSL 154
>gi|254571279|ref|XP_002492749.1| Protein involved in ubiquitin ligation [Komagataella pastoris
GS115]
gi|238032547|emb|CAY70570.1| Protein involved in ubiquitin ligation [Komagataella pastoris
GS115]
gi|328353243|emb|CCA39641.1| RING finger protein YHR115C [Komagataella pastoris CBS 7435]
Length = 356
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 19/93 (20%)
Query: 21 EFKPGSKIRIGRIV------------RGNDVTIKDDGISSKH--LIIESVSGKWTIQDLD 66
+ KP +I IGR V K +S H ++S SG W I+DL
Sbjct: 134 KIKPNHQISIGRYTEKSRDAAHAPQGSSASVVFKSKVVSRSHAQFTVDS-SGNWYIKDLK 192
Query: 67 SCNGTFLNSTTL-PPNTP---FDLRENDTIKLG 95
S +GTFLN+ L P NT F L++ D ++LG
Sbjct: 193 SSSGTFLNNQRLAPANTESPLFRLQDGDILQLG 225
>gi|414588449|tpg|DAA39020.1| TPA: hypothetical protein ZEAMMB73_658424 [Zea mays]
Length = 1126
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
T+ DL S +GT+++ +PPNTP DL DT++LG
Sbjct: 86 TVTDLHSVHGTWVSGRRIPPNTPVDLATGDTLRLG 120
>gi|442319274|ref|YP_007359295.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486916|gb|AGC43611.1| FHA domain-containing protein [Myxococcus stipitatus DSM 14675]
Length = 311
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + G G K I IGR D+ + +D +S KH I GK TI+D+ S
Sbjct: 9 LKFISGKYQGGEFPLKAEKHIVIGR-SSELDMVLVEDMVSRKHAKISFSDGKITIEDMGS 67
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQ----DESVAKPK 118
NGTF+N + L+E D I +G T+I ++++ ++ DESVAK K
Sbjct: 68 TNGTFVNGEKVKQAR---LKEGDRILIG--TSI-LKLVHQGAEGANVDESVAKQK 116
>gi|308175845|ref|YP_003915251.1| FHA domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307743308|emb|CBT74280.1| FHA domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 159
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
+V GP +G +I + G I GR + V + DD S +H + +W I+DL S N
Sbjct: 70 VVEGPLTGSSIPLR-GQPILFGR-AQDATVVLDDDYASGRHARLFPQGSRWFIEDLGSTN 127
Query: 70 GTFLNSTTL 78
GTF+ + L
Sbjct: 128 GTFVGDSQL 136
>gi|302688451|ref|XP_003033905.1| hypothetical protein SCHCODRAFT_75418 [Schizophyllum commune H4-8]
gi|300107600|gb|EFI99002.1| hypothetical protein SCHCODRAFT_75418, partial [Schizophyllum
commune H4-8]
Length = 152
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 20/114 (17%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE 54
EPP G +L + +G E + S IGR D+ I+ S +H +I+
Sbjct: 25 EPPEARKPLQGWRLYVFKGDEQVELLHINRQSAYLIGRDRLVCDIYIEHPSCSKQHAVIQ 84
Query: 55 S-----------VSG--KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
V G K + DL+S NGT +N +P + ++L+ ND IK G
Sbjct: 85 YRQIKEKNEFGEVKGVIKPFVIDLESTNGTQVNGEKIPESRYYELKLNDVIKFG 138
>gi|320526755|ref|ZP_08027945.1| FHA domain protein [Solobacterium moorei F0204]
gi|320132723|gb|EFW25263.1| FHA domain protein [Solobacterium moorei F0204]
Length = 238
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
+P + I V G TI P IGR D+ I + IS KH I S +
Sbjct: 137 DPKILVTIKVAGQTKDHTISKLPC---LIGREAASCDLVINEPAISRKHARILIESDTFY 193
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
+ D+ NGT+LN LPP + E D I LG + Q+I
Sbjct: 194 LADVSEHNGTYLNGIKLPPLGKARIHEGDHINLGRAEIVINQII 237
>gi|220910510|ref|YP_002485821.1| FHA domain-containing protein [Cyanothece sp. PCC 7425]
gi|219867121|gb|ACL47460.1| FHA domain containing protein [Cyanothece sp. PCC 7425]
Length = 320
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 39 VTIKDDGISSKHLIIESVS-GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
+ I D IS +H I+E+++ G +++ DLDS NG+F+N + P L+ D I G
Sbjct: 79 IVIPDRRISRRHAIVEAIAPGLFSLIDLDSLNGSFVNQQRV--TKPVILQNGDRILFGQT 136
Query: 98 -----TTISVQMITMDSQDESVAKP 117
T + ++ ++ +D+ +A P
Sbjct: 137 EVNFQTPARMHLVNINYEDDPLACP 161
>gi|116748006|ref|YP_844693.1| adenylate/guanylate cyclase [Syntrophobacter fumaroxidans MPOB]
gi|116697070|gb|ABK16258.1| adenylate/guanylate cyclase [Syntrophobacter fumaroxidans MPOB]
Length = 523
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 30 IGRIVRGNDVTIKDDGISSKH-LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
IGR+ R N + I DD +S +H LI G + I+DL S NGTF+N + TP R+
Sbjct: 23 IGRLSR-NRIRIADDLVSKEHCLIYLDPRGGYGIKDLGSQNGTFVNGHRIVRETPLSDRD 81
Query: 89 NDTIKLGDCTTIS 101
TI C ++
Sbjct: 82 VVTIGRTSCIFLA 94
>gi|32471596|ref|NP_864589.1| hypothetical protein RB1789 [Rhodopirellula baltica SH 1]
gi|417301763|ref|ZP_12088901.1| FHA domain containing protein [Rhodopirellula baltica WH47]
gi|421614827|ref|ZP_16055870.1| FHA domain containing protein [Rhodopirellula baltica SH28]
gi|440714976|ref|ZP_20895539.1| FHA domain containing protein [Rhodopirellula baltica SWK14]
gi|32443437|emb|CAD72270.1| conserved hypothetical protein-FHA-domain-containing protein
[Rhodopirellula baltica SH 1]
gi|327541933|gb|EGF28439.1| FHA domain containing protein [Rhodopirellula baltica WH47]
gi|408494384|gb|EKJ98999.1| FHA domain containing protein [Rhodopirellula baltica SH28]
gi|436440112|gb|ELP33481.1| FHA domain containing protein [Rhodopirellula baltica SWK14]
Length = 243
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
K + +S +H I+ G+ +QDL S NGTF+N LP + L++ D +++G
Sbjct: 37 KSESVSRRHCILAIKDGRVLVQDLKSRNGTFVNDKRLPADKAKVLKDGDLLRVG 90
>gi|405373310|ref|ZP_11028083.1| FHA domain protein [Chondromyces apiculatus DSM 436]
gi|397087569|gb|EJJ18599.1| FHA domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 357
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT---IQD 64
L + GPR GE IE ++ +GR + D+ +KDD +S KH V W+ ++D
Sbjct: 141 LRFMNGPREGERIELGDAKEVVLGREQKDADIVLKDDLVSRKH---AKVRRDWSGTHVED 197
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
L S NG +N + L++ D +++G + V
Sbjct: 198 LGSRNGIKVNKKRVNRR---QLKDGDELEVGATRFVYV 232
>gi|341038727|gb|EGS23719.1| hypothetical protein CTHT_0004180 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 845
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHL-IIESVSGKWTIQDLDSCNGT 71
T+ F P + +RIGR V +G +S +H I +GK I+D+ S NGT
Sbjct: 188 TVPFFPET-LRIGRQTNAKTVPTPQNGYFDSKVLSRQHAEIWADANGKIWIRDIKSSNGT 246
Query: 72 FLNSTTLPPNT----PFDLRENDTIKLG 95
F+N T L P P +L +D ++LG
Sbjct: 247 FVNGTRLAPENRESEPCELHVHDHLELG 274
>gi|289445545|ref|ZP_06435289.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289418503|gb|EFD15704.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length = 521
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 438 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 493
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 494 NNA---PVQEWQLADGDVIRLGHSEII 517
>gi|164655988|ref|XP_001729122.1| hypothetical protein MGL_3589 [Malassezia globosa CBS 7966]
gi|159103012|gb|EDP41908.1| hypothetical protein MGL_3589 [Malassezia globosa CBS 7966]
Length = 564
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGS---KIRIGRIVRGNDVTIKDDG------ISSKHLIIE 54
P + L + + I P S +I+IGR V +G +S H +
Sbjct: 39 PALHLYPLNDTFVPKQINLAPASSNNRIKIGRYSNNKTVPSPVNGYFDSKVLSRAHAEVW 98
Query: 55 SVSGKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLGDCTTISVQMITMDSQ 110
+ K I+D+ S NGTF+N T L P + PF+L D + G + ++T D++
Sbjct: 99 CENDKVFIKDIKSSNGTFINGTRLSPESQESEPFELHSEDVVDFG------IDILTDDNK 152
Query: 111 D 111
D
Sbjct: 153 D 153
>gi|157273461|gb|ABV27360.1| serine/threonine-protein kinase PknA [Candidatus
Chloracidobacterium thermophilum]
Length = 443
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 38 DVTIKDD--GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT-LPPNTPFDLRENDTIKL 94
D+T D+ +S +H + ++ I+DL S NGTFLN L P TP LR+ D +KL
Sbjct: 374 DLTPHDNETKVSRRHARLFRKGEQFFIEDLSSVNGTFLNGNIRLIPKTPHLLRDGDVLKL 433
Query: 95 GD 96
G+
Sbjct: 434 GE 435
>gi|153812894|ref|ZP_01965562.1| hypothetical protein RUMOBE_03301 [Ruminococcus obeum ATCC 29174]
gi|149830972|gb|EDM86062.1| FHA domain protein [Ruminococcus obeum ATCC 29174]
Length = 389
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIK-DDGISSKHLIIESVSGKWT 61
PP + + ++R E + K + +IG+ D+ I+ + IS +H II G +
Sbjct: 287 PPKINVRLIRRNTGEEFVINK--ERTKIGKKAAVVDICIQGNKTISREHCIITFEEGGFF 344
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
++D S N T+LN T L P P L + I++ D
Sbjct: 345 LEDCHSLNHTYLNKTELEPEIPVRLETDSEIQMSD 379
>gi|164424668|ref|XP_959230.2| hypothetical protein NCU06883 [Neurospora crassa OR74A]
gi|157070611|gb|EAA29994.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 348
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
+L + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 232 WRLYVFKGDEVIDTIELHTRSCWLVGRDLAIADLPAEHPSISKQHAVIQFRYTEKRNEYG 291
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
K + DL+S NGT LN +P + +LR+ D I+ G T V M+
Sbjct: 292 DKIGRVKPYLIDLESANGTKLNGDKVPDSRYLELRDKDMIQFGSSTREYVLML 344
>gi|452991551|emb|CCQ97121.1| FHA domain containing protein [Clostridium ultunense Esp]
Length = 143
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 35 RGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
+ N++ IKD IS KHL I G + ++DL+S NGT+LN + L+ D I++
Sbjct: 75 KDNEIMIKDPYISKKHLRIVKDEGDYYLEDLNSANGTYLNGDKIMDVAQ--LKNGDRIRI 132
Query: 95 GDCTTISV 102
G + V
Sbjct: 133 GQVEFLYV 140
>gi|268608650|ref|ZP_06142377.1| forkhead-associated protein [Ruminococcus flavefaciens FD-1]
Length = 139
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
I IGR D+ + D +S H ++ +G+WTI D+ S +G F+N + L
Sbjct: 61 ILIGRHASA-DIRLPDLSVSRYHAMLTVSNGRWTITDIGSKSGVFVNGNLVHEAV---LH 116
Query: 88 ENDTIKLGD 96
END IKLG+
Sbjct: 117 ENDIIKLGN 125
>gi|256823235|ref|YP_003147198.1| FHA domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796774|gb|ACV27430.1| FHA domain containing protein [Kangiella koreensis DSM 16069]
Length = 182
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L+ P +G+ + G + IGR +GN VT+ D SS H I G+W I +L S
Sbjct: 53 LLATTKPHAGQAFLLEYGKNV-IGR-GKGNSVTLYDPAASSTHAQITFSDGQWRILNLLS 110
Query: 68 CNGTFLN 74
NGT +N
Sbjct: 111 SNGTIVN 117
>gi|456392498|gb|EMF57841.1| ABC transporter ATP-binding protein [Streptomyces bottropensis
ATCC 25435]
Length = 775
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
SG T+ P +GR +DV + DD +S H ++ + +G WTI+D S NGT+
Sbjct: 19 SGSTV-MTPNHAYHVGRDPL-SDVVLDDDRVSWHHAVLRAEAGHWTIEDEHSTNGTY 73
>gi|354566021|ref|ZP_08985194.1| adenylate/guanylate cyclase with GAF sensor and FHA domain
[Fischerella sp. JSC-11]
gi|353546529|gb|EHC15977.1| adenylate/guanylate cyclase with GAF sensor and FHA domain
[Fischerella sp. JSC-11]
Length = 535
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 38 DVTIKDDGISSKHL-IIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ + G+S H ++++ +G WTI+D+ S NGT LN + ++P +R D I LGD
Sbjct: 33 DLYLPFGGVSRWHARLLKTAAGVWTIEDMGSKNGTQLNDRLV--SSPQQVRHGDIIWLGD 90
Query: 97 CTTISVQMITMDSQDESVAKPKR 119
V M+ + +Q PK+
Sbjct: 91 -----VSMLVLLAQPVETVIPKQ 108
>gi|126465451|ref|YP_001040560.1| FHA domain-containing protein [Staphylothermus marinus F1]
gi|126014274|gb|ABN69652.1| FHA domain containing protein [Staphylothermus marinus F1]
Length = 116
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
+PG + +GR ND+ I D +S +H I +G+W I+DLDS NGT +++ +
Sbjct: 31 LEPGEYV-LGR-YPTNDIVIPDPYVSRRHARIFYENGEWYIEDLDSTNGTIVDNEDIRGK 88
Query: 82 TPFDLRENDTIKLG 95
P + N I +G
Sbjct: 89 GPKKINNNSEIVVG 102
>gi|418467310|ref|ZP_13038199.1| ABC transporter ATP-binding protein [Streptomyces coelicoflavus
ZG0656]
gi|371552094|gb|EHN79353.1| ABC transporter ATP-binding protein [Streptomyces coelicoflavus
ZG0656]
Length = 867
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 11 VRGPRSGETI-EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSC 68
V G RS T +F G +RIGR + ND+ + D +S H S G+ I+DL S
Sbjct: 192 VYGDRSPTTFHQFSLGRVMRIGRALE-NDLVVSDLQVSRNHAEFHSTPDGRMEIRDLGSH 250
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGT++N +P L D + +G T
Sbjct: 251 NGTYVNGQPIPKGGTQLLGPTDIVGVGHST 280
>gi|162454541|ref|YP_001616908.1| hypothetical protein sce6261 [Sorangium cellulosum So ce56]
gi|161165123|emb|CAN96428.1| putative membrane protein [Sorangium cellulosum So ce56]
Length = 503
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
N + + D +S H + W I+DLDS NGT++N + LR D ++LGD
Sbjct: 31 NSIRLTDRNVSRTHATLAKNGQGWVIRDLDSYNGTYVNGGRVTGEQ--HLRHGDLVQLGD 88
Query: 97 C 97
Sbjct: 89 Y 89
>gi|391336806|ref|XP_003742769.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Metaseiulus
occidentalis]
Length = 293
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 36 GN-DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
GN V+I +S +H SG WT++DL+S NG ++N + P L+ D I L
Sbjct: 27 GNCSVSIHSVIVSRRHAEFRRSSGVWTVKDLESVNGVYVNYKKIEPPHSCKLKNEDLISL 86
Query: 95 GDC--TTISVQMI-TMDSQD 111
G T ++ Q I +D D
Sbjct: 87 GPIHRTNMAFQFIQVLDDPD 106
>gi|384495389|gb|EIE85880.1| hypothetical protein RO3G_10590 [Rhizopus delemar RA 99-880]
Length = 259
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 4 PGMKLIMVRGPRSGETI------EFKPGSKIRIGRIVRGNDV----TIKDDGISSKHLII 53
P ++L+ GP + E KPG RIGR N + + K +S H +
Sbjct: 23 PHIRLVPNLGPVDQNFVFDIIKRELKPGVSYRIGRFSEKNFIEPKLSFKSKVVSRNHAEL 82
Query: 54 ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF------DLRENDTIKLG 95
+ GK ++D+ S +GTF+N L +TP +LR+ D I+LG
Sbjct: 83 WTEQGKVFLRDIGSSSGTFINHIRL--STPNQESERQELRDGDVIQLG 128
>gi|254773075|ref|ZP_05214591.1| xyppx repeat-containing protein [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 200
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 117 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLSDLNSTNGTTV 172
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 173 NNA---PVQEWQLADGDVIRLGHSEII 196
>gi|213982801|ref|NP_001135572.1| ring finger protein 8, E3 ubiquitin protein ligase [Xenopus
(Silurana) tropicalis]
gi|195539833|gb|AAI68076.1| Unknown (protein for MGC:185901) [Xenopus (Silurana) tropicalis]
Length = 342
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGR---IVRGNDVTIKDDGISSKHLII-ESVSGK 59
PGM + R RS E++ G ++ +GR + T+ IS H + ++V G+
Sbjct: 6 PGMCWYLRRCGRSEESLPLPDGEEVTMGRGLGVTYQLKPTLCPLMISRTHCLFKQNVRGE 65
Query: 60 WTIQDLDSCNGTFLNSTTLPPNTPFDL 86
WT+ D S NG + N L P+ + L
Sbjct: 66 WTVTDNKSLNGVWRNKERLEPHKAYTL 92
>gi|148655809|ref|YP_001276014.1| forkhead-associated protein [Roseiflexus sp. RS-1]
gi|148567919|gb|ABQ90064.1| Forkhead-associated protein [Roseiflexus sp. RS-1]
Length = 894
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+ IGR+ +G+D+ + D IS H +E + DL S GTFL + L P TP++
Sbjct: 52 VTIGRL-KGSDLVLDDPTISRNHARVEWDGRHARVTDLGSKLGTFLGAVRLMPQTPYEWS 110
Query: 88 ENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAE 145
+ +++G ++ +V P +P V G+ AT+G A AE
Sbjct: 111 PDQPLRIGRYV---FRLYPGALPPAAVTAPSASP-----VAGSGRPEATAGVSSAVAE 160
>gi|444909972|ref|ZP_21230160.1| FHA/GGDEF domain protein [Cystobacter fuscus DSM 2262]
gi|444719570|gb|ELW60362.1| FHA/GGDEF domain protein [Cystobacter fuscus DSM 2262]
Length = 308
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRE 88
+GR V ++DDGIS KH + S+ G++ + DL S NGTFLN + +D
Sbjct: 54 LGRSVEAQ-FQVEDDGISRKHAKVVSLGDGRFQLVDLGSTNGTFLNGLKVSAAPLYD--- 109
Query: 89 NDTIKLGDCTTISVQM 104
D I++G T + +
Sbjct: 110 GDKIQIGSNTVLKFSI 125
>gi|328943490|ref|ZP_08240955.1| hypothetical protein HMPREF0091_10180 [Atopobium vaginae DSM 15829]
gi|327491459|gb|EGF23233.1| hypothetical protein HMPREF0091_10180 [Atopobium vaginae DSM 15829]
Length = 435
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 15 RSGETIE-FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
++GET E F P + IGR + ++D IS +H I W IQDL S NGT +
Sbjct: 350 QTGETYEVFAP--QTVIGRERSHAQIVLRDSNISRRHAQITYNGRNWLIQDLGSTNGTQV 407
Query: 74 NSTTLPPNTPFDLRENDTIKLG 95
N+ T+ LR D I L
Sbjct: 408 NNMTVDSCV---LRNGDIITLA 426
>gi|162457277|ref|YP_001619644.1| FHA domain-containing protein [Sorangium cellulosum So ce56]
gi|161167859|emb|CAN99164.1| FHA domain protein [Sorangium cellulosum So ce56]
Length = 332
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
E P ++++V GP SG + + ++ I + D+ + D +S +HL I +++
Sbjct: 134 EDPAPRVVVVEGPDSGRALRIEEAARPYILGRAKDTDLVLDDPDVSRRHLAITRRGDQFS 193
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTI-KLGDCTTISV-QMITMDSQDESVAKPKR 119
+QDL S +G L+ +P + DTI + G IS ++I E++A+ +R
Sbjct: 194 VQDLGSRSGASLDGAPVP--------QFDTIWRPGQVLAISGDRLIFEHPAAEALAEIER 245
Query: 120 NP 121
+P
Sbjct: 246 SP 247
>gi|406606755|emb|CCH41791.1| hypothetical protein BN7_1330 [Wickerhamomyces ciferrii]
Length = 489
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Query: 23 KPGSKIRIGRI---VR-------GND--VTIKDDGISSKHL-IIESVSGKWTIQDLDSCN 69
KPGSK+ +GR VR G+D V K +S H I G W I+DL S +
Sbjct: 236 KPGSKLSLGRYTDKVREAAQAPPGSDLPVVFKSKVVSRTHAEFIVDYEGNWFIRDLKSSS 295
Query: 70 GTFLNSTTLPP 80
GTFLN L P
Sbjct: 296 GTFLNHIRLSP 306
>gi|363731536|ref|XP_419473.3| PREDICTED: kanadaptin [Gallus gallus]
Length = 674
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES-------- 55
PG+ L +++G ++ + GS +GR+ G + ++ +S H +++
Sbjct: 49 PGLGLEVLKGGVLLGSVRLEGGSWFLVGRLP-GCALALEHPSVSRHHAVLQYRGRSADGP 107
Query: 56 -VSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
+ + DL S +GTFLN +PP T +R ++ G + + +
Sbjct: 108 DADAGFYVYDLGSTHGTFLNKARVPPRTYCRVRVGHGLRFGGSSRLFL 155
>gi|308234209|ref|ZP_07664946.1| FHA domain containing protein [Atopobium vaginae DSM 15829]
Length = 437
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 15 RSGETIE-FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
++GET E F P + IGR + ++D IS +H I W IQDL S NGT +
Sbjct: 352 QTGETYEVFAP--QTVIGRERSHAQIVLRDSNISRRHAQITYNGRNWLIQDLGSTNGTQV 409
Query: 74 NSTTLPPNTPFDLRENDTIKLG 95
N+ T+ LR D I L
Sbjct: 410 NNMTVDSCV---LRNGDIITLA 428
>gi|134115078|ref|XP_773837.1| hypothetical protein CNBH2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256465|gb|EAL19190.1| hypothetical protein CNBH2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 248
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE------------ 54
+L + +G + I S IGR D+ + S +H I+
Sbjct: 132 RLYVFKGTEQIDLIHIYRQSCYLIGRDEVVTDIPVAHPSCSKQHAAIQYRQMTERNEYGD 191
Query: 55 -SVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+ + K I DLDS NGTF+N +P + ++LR +D IK G
Sbjct: 192 VATTIKPFIIDLDSTNGTFVNDIEIPKSRYYELRPSDVIKFG 233
>gi|428774828|ref|YP_007166615.1| GAF sensor-containing adenylate/guanylate cyclase [Halothece sp.
PCC 7418]
gi|428689107|gb|AFZ42401.1| adenylate/guanylate cyclase with GAF sensor and FHA domain
[Halothece sp. PCC 7418]
Length = 552
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 38 DVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV + IS +H V+ GKW ++DL S NGT LN + P ++ DTI++G+
Sbjct: 37 DVYLPYSEISRRHCQFRRVAQGKWRVEDLGSTNGTVLNQVRV--EKPTLIQHGDTIQIGN 94
Query: 97 CTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVETLGLEGGQ 156
T +T+ SQ+ S + P R+ G S+V+ AE + +EG Q
Sbjct: 95 VTI----KVTLTSQELSSSSKIDPPPRE----GHSAVKTI----LRNAEELRQRWIEGDQ 142
Query: 157 IEDQSRINKKGRGRNKNLQEMP-----PQSVEVQVESKENLELEEGGEIE 201
+D + R + + E+ +S+E E++ +E I+
Sbjct: 143 RKDPLSTDHITHARLQYIVEIAKGLNSAESIEAIFYQVESVIFQELRHID 192
>gi|383638538|ref|ZP_09950944.1| ABC transporter ATP-binding protein [Streptomyces chartreusis
NRRL 12338]
Length = 776
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
+G T+ PG +GR +D+ I DD +S H ++ G WTI+D +S NGT+
Sbjct: 16 TGFTV-MVPGRDYHVGRD-PSSDIVIDDDRVSWHHAVLRPDHGHWTIEDENSTNGTY 70
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 15 RSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFL 73
R T+ P +RIGR ND+ I D +S +H + ++ G + I DL S NGT+L
Sbjct: 124 RQPTTVRPLPARTVRIGR-ATDNDLVIDDLVVSRRHAELRALPDGTYEITDLGSHNGTYL 182
Query: 74 NST 76
N +
Sbjct: 183 NGS 185
>gi|358013226|ref|ZP_09145036.1| fha domain-containing protein [Acinetobacter sp. P8-3-8]
Length = 568
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D+ +K I+ KH I+ +SG + ++DL+ NGT +N + P DL NDTI + +
Sbjct: 30 DLQLKGWFIADKHCAIKKLSGGYVVEDLNRGANGTLVNKKKIDFFGPLDLT-NDTIFINN 88
Query: 97 CTTISVQMITMDSQDE-----SVAKPKRNPRRQANVPGTSSVRATS-GRKKAEAEPVETL 150
S+ ++ DS DE S + NV +V +T + ++ ++L
Sbjct: 89 Y---SINILEEDSDDEIKIVNSHSIDHSVLESLINVSNEDTVHSTQVANLQYNSKAYKSL 145
Query: 151 GLEGGQIEDQSRINKKGRGRNKNLQEMPP 179
+E QI + ++ KK R K++ M P
Sbjct: 146 EVEWIQIL-REKLVKKMDLRRKDINTMTP 173
>gi|323701796|ref|ZP_08113467.1| FHA domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|333923480|ref|YP_004497060.1| FHA domain-containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323533332|gb|EGB23200.1| FHA domain containing protein [Desulfotomaculum nigrificans DSM
574]
gi|333749041|gb|AEF94148.1| FHA domain containing protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 263
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + D +S +H E V+G++ + DL+S NGT++N P +L D I +G+
Sbjct: 200 DIMLSDHSVSRRHAQFEQVAGRFWLTDLNSTNGTYVNGL---PIEKVELTSGDVITVGNT 256
Query: 98 TTI 100
I
Sbjct: 257 VLI 259
>gi|426353003|ref|XP_004043991.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 2 [Gorilla
gorilla gorilla]
Length = 449
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|410658816|ref|YP_006911187.1| hypothetical protein DHBDCA_p2175 [Dehalobacter sp. DCA]
gi|410661802|ref|YP_006914173.1| hypothetical protein DCF50_p2185 [Dehalobacter sp. CF]
gi|409021171|gb|AFV03202.1| hypothetical protein DHBDCA_p2175 [Dehalobacter sp. DCA]
gi|409024158|gb|AFV06188.1| hypothetical protein DCF50_p2185 [Dehalobacter sp. CF]
Length = 261
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
+++G GE + I +GR D+ ++D IS HL + + + +W +QDL S N
Sbjct: 171 VIKGTNEGEIYDLNKDEYI-VGR-QEDCDIEVRDLEISRHHLKLYTENRRWFVQDLGSTN 228
Query: 70 GTFLN 74
GT+LN
Sbjct: 229 GTYLN 233
>gi|405375771|ref|ZP_11029793.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Chondromyces apiculatus DSM 436]
gi|397085936|gb|EJJ17094.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Myxococcus sp. (contaminant ex DSM 436)]
Length = 597
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+++ IGR+ GND+ + +S H I + GK+ I D+ S NGTF+N + P
Sbjct: 21 NEVTIGRL-PGNDIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKIA--APQV 77
Query: 86 LRENDTIKLGD 96
L+ D + +GD
Sbjct: 78 LKPTDQVYIGD 88
>gi|289748482|ref|ZP_06507860.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
gi|289689069|gb|EFD56498.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium
tuberculosis T92]
Length = 246
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 163 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 218
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 219 NNA---PVQEWQLADGDVIRLGHSEII 242
>gi|384950188|gb|AFI38699.1| E3 ubiquitin-protein ligase RNF8 isoform 2 [Macaca mulatta]
Length = 449
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|163846328|ref|YP_001634372.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222524092|ref|YP_002568563.1| serine/threonine protein kinase with FHA domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163667617|gb|ABY33983.1| protein kinase [Chloroflexus aurantiacus J-10-fl]
gi|222447971|gb|ACM52237.1| serine/threonine protein kinase with FHA domain protein
[Chloroflexus sp. Y-400-fl]
Length = 460
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGR--IVRGN----DVTIKDDGISSK-HLIIESV 56
P +LI+ R+ E + + S IRIGR R + D+ D GI+S+ H IIE
Sbjct: 355 PPARLILRSPYRTWEVVLDR--SPIRIGRRDPRRAHFPEIDLAEHDRGIASRLHAIIERR 412
Query: 57 SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
+ + D S NGT +N + PN P L+ D IK+G+
Sbjct: 413 GDHYILTDQKSTNGTEINGKQILPNVPQRLQAGDRIKIGE 452
>gi|397496213|ref|XP_003818936.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 2 [Pan
paniscus]
gi|410258380|gb|JAA17157.1| ring finger protein 8 [Pan troglodytes]
Length = 448
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + +++ D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIQQGDYIQLG 109
>gi|37520975|ref|NP_924352.1| hypothetical protein gll1406 [Gloeobacter violaceus PCC 7421]
gi|35211971|dbj|BAC89347.1| gll1406 [Gloeobacter violaceus PCC 7421]
Length = 251
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 46 ISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF--DLRENDTIKLGDCTTISVQ 103
+S H I S G + ++D S NGTFLN + P T F L+ DTI LG +S +
Sbjct: 187 VSRVHAAIHSSEGNFALEDAGSSNGTFLNGELIKPGTRFRRKLKAGDTIALGKANKMSFR 246
Query: 104 M 104
Sbjct: 247 F 247
>gi|229818533|ref|YP_002880059.1| FHA domain-containing protein [Beutenbergia cavernae DSM 12333]
gi|229564446|gb|ACQ78297.1| FHA domain containing protein [Beutenbergia cavernae DSM 12333]
Length = 161
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 2 EPPG------MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES 55
EPP + L ++ GP +G + S + IGR G + + DD S +H I
Sbjct: 58 EPPHGARARPVTLAVLAGPLAGTRLSLS-SSAVLIGR-SPGCTLVLDDDYASGRHARIFP 115
Query: 56 VSGKWTIQDLDSCNGTFL 73
G+W ++DL S NGT+L
Sbjct: 116 HDGRWLVEDLGSTNGTYL 133
>gi|196229519|ref|ZP_03128384.1| serine/threonine protein kinase with FHA domain [Chthoniobacter
flavus Ellin428]
gi|196226751|gb|EDY21256.1| serine/threonine protein kinase with FHA domain [Chthoniobacter
flavus Ellin428]
Length = 618
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P L ++R E F PG + IGR V D+ I IS H + +
Sbjct: 1 MSLPQAHLTILRKDAHKEVRSFFPGDYV-IGRGVEA-DIRIDTPLISRAHARLTIKEREC 58
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
I+DLDS NGTF+N + T LR + I LG T+ ++ +
Sbjct: 59 LIEDLDSANGTFINGERIGSVTV--LRPEEHIMLGPSVTLEIRQM 101
>gi|116671241|ref|YP_832174.1| FHA domain-containing protein [Arthrobacter sp. FB24]
gi|116611350|gb|ABK04074.1| FHA domain containing protein [Arthrobacter sp. FB24]
Length = 1363
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 13 GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
GP +G + + G+ RIGR RG ++ I D +S +H ++ TI DL+S NGTF
Sbjct: 110 GPAAGTVVPLRRGT-YRIGR--RGTEIAIPDAALSREHARLDVTDTAVTIADLNSVNGTF 166
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDC--TTISV--------QMITMDSQDESVAKPKRNPR 122
++ + + T L C +T+S+ ++ + SVA+P R P
Sbjct: 167 VDGKLVAQASV------STCSLISCGNSTLSIVFGPGPARRLPEWQAAGASVAEPLRVPH 220
Query: 123 R 123
R
Sbjct: 221 R 221
>gi|407277485|ref|ZP_11105955.1| hypothetical protein RhP14_13345 [Rhodococcus sp. P14]
Length = 206
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 20 IEFKPGS-KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD-SCNGTFLNSTT 77
E PGS ++ IGR + D+ +S H ++E + WTI D S NGTFLN
Sbjct: 21 FELSPGSPRVTIGRAPTSDVAFTGDNEVSRLHAVVEWIGTHWTILDDGLSRNGTFLNGER 80
Query: 78 LPPNTPFDLRENDTIKLG 95
+ LRE D+I++G
Sbjct: 81 ITGRR--RLREGDSIRIG 96
>gi|225024836|ref|ZP_03714028.1| hypothetical protein EIKCOROL_01723 [Eikenella corrodens ATCC
23834]
gi|224942365|gb|EEG23574.1| hypothetical protein EIKCOROL_01723 [Eikenella corrodens ATCC
23834]
Length = 562
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGTFLNS-- 75
I PG +RIGR GNDV I +S H I +G ++DL S NG+F++S
Sbjct: 476 AIALYPGQTVRIGR-NSGNDVVINRQQVSGSHCRISVDAAGNVVLEDLQSTNGSFVDSLE 534
Query: 76 -----TTLPPNTPFDLREND 90
TTL P L D
Sbjct: 535 QRISRTTLRPGQTIYLANRD 554
>gi|170045202|ref|XP_001850206.1| kanadaptin [Culex quinquefasciatus]
gi|167868193|gb|EDS31576.1| kanadaptin [Culex quinquefasciatus]
Length = 678
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 49 KHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMD 108
+H+ +E W + DL S +GTFLN LPP T +R +KLG + + +T
Sbjct: 145 RHVTVEP---GWYLYDLSSTHGTFLNKQRLPPKTYVRVRVGYMVKLGSSSRSYI--LTGP 199
Query: 109 SQDESV 114
++DE
Sbjct: 200 AEDEDA 205
>gi|392415028|ref|YP_006451633.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium chubuense NBB4]
gi|390614804|gb|AFM15954.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium chubuense NBB4]
Length = 854
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
PP + + PR+ F G+ + +GR +R DV I IS HL++ G+W
Sbjct: 5 APPALTVRYDGSPRT-----FAAGNDVVVGRDLRA-DVRIAHPLISRAHLVLRFDQGRWI 58
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
D S NG ++N +P DL + + LG+
Sbjct: 59 AIDNGSLNGMYVNGRRVPAA---DLSDGAQVHLGN 90
>gi|332255679|ref|XP_003276960.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 2 [Nomascus
leucogenys]
Length = 449
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|428776845|ref|YP_007168632.1| FHA modulated glycosyl transferase/transpeptidase [Halothece sp.
PCC 7418]
gi|428691124|gb|AFZ44418.1| FHA modulated glycosyl transferase/transpeptidase [Halothece sp.
PCC 7418]
Length = 743
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTP 83
G + +GR R D+ +++ IS HL I SG +TI+D DS NG ++ +
Sbjct: 57 GDRYLLGRSSRSCDIVVRNSLISQVHLSINRTQSGNYTIKDEDSLNGIYIGKRK---QSS 113
Query: 84 FDLRENDTIKLG 95
F LR D LG
Sbjct: 114 FVLRHGDRFTLG 125
>gi|227494211|ref|ZP_03924527.1| FHA domain protein [Actinomyces coleocanis DSM 15436]
gi|226831945|gb|EEH64328.1| FHA domain protein [Actinomyces coleocanis DSM 15436]
Length = 162
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
+P KL++ GP G +IE +++ IGR + + + D SS+H I W
Sbjct: 64 QPTMTKLLITSGPLIGTSIEL-VNNEVVIGR-SPASTLVLDDSYASSRHARIFKDGDYWF 121
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
I+DL S NGT+++ + PF + N +++G T
Sbjct: 122 IEDLGSTNGTYVDDERISGVQPFAV--NQILRIGQST 156
>gi|394988266|ref|ZP_10381104.1| hypothetical protein SCD_00668 [Sulfuricella denitrificans skB26]
gi|393792724|dbj|GAB70743.1| hypothetical protein SCD_00668 [Sulfuricella denitrificans skB26]
Length = 259
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
+I IGR ND+ I + IS +H I +V+ ++ ++DL S NGT +N P T L
Sbjct: 22 RITIGRNPH-NDIPIDNLAISGEHAAITTVNNEFFVEDLGSTNGTLVNEQ---PITKHTL 77
Query: 87 RENDTIKLG 95
D I++G
Sbjct: 78 HHGDEIEIG 86
>gi|327259048|ref|XP_003214350.1| PREDICTED: protein KIAA0284 homolog [Anolis carolinensis]
Length = 1643
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK---WTIQDLDSCNGTFLNSTTLPP 80
P I +GR ++ ++ + +H +I K W ++DL S NGTF+N +P
Sbjct: 19 PREMIFVGR--EDCELMLQSRSVDKQHAVINYDKEKDEHW-VKDLGSLNGTFVNDVRIPD 75
Query: 81 NTPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRA 135
L+ ND I+ G D ++ I +E++ K + Q + GT+ RA
Sbjct: 76 QKYITLKLNDVIRFGYDANMYVLEQIQHKVPEEALKHEKYTSQLQMSFKGTAVKRA 131
>gi|108762982|ref|YP_631310.1| type II/IV secretion system protein [Myxococcus xanthus DK 1622]
gi|108466862|gb|ABF92047.1| type II/IV secretion system protein [Myxococcus xanthus DK 1622]
Length = 595
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+++ IGR+ GND+ + +S H I + GK+ I D+ S NGTF+N + P
Sbjct: 21 NEVTIGRL-PGNDIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKIA--APQV 77
Query: 86 LRENDTIKLGD 96
L+ D + +GD
Sbjct: 78 LKPTDQVYIGD 88
>gi|339441830|ref|YP_004707835.1| hypothetical protein CXIVA_07660 [Clostridium sp. SY8519]
gi|338901231|dbj|BAK46733.1| hypothetical protein CXIVA_07660 [Clostridium sp. SY8519]
Length = 468
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 30 IGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
IG+ V G D ++ + +S H +I++ G +QD++S NGT LN +P +TP ++
Sbjct: 392 IGKRVGGADGILQAETVSRVHARIILDPEQG-ICVQDMNSTNGTRLNGDLIPFHTPVPVK 450
Query: 88 ENDTIKLG 95
+ND + G
Sbjct: 451 KNDRLMFG 458
>gi|336466942|gb|EGO55106.1| hypothetical protein NEUTE1DRAFT_16038 [Neurospora tetrasperma FGSC
2508]
gi|350288449|gb|EGZ69685.1| SMAD/FHA domain-containing protein, partial [Neurospora tetrasperma
FGSC 2509]
Length = 294
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
+L + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 178 WRLYVFKGDEVIDTIELHTRSCWLVGRDLAIADLPAEHPSISKQHAVIQFRYTEKRNEYG 237
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
K + DL+S NGT LN +P + +LR+ D I+ G T V M+
Sbjct: 238 DKIGCVKPYLIDLESANGTKLNGDKVPDSRYLELRDKDMIQFGSSTREYVLML 290
>gi|310819388|ref|YP_003951746.1| FHA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309392460|gb|ADO69919.1| FHA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 528
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQD 64
G +L + G +G+ +F+ ++ IGR DV + D GIS KH I S+ ++ ++D
Sbjct: 2 GFQLKIAEGKDAGKEFQFE-HEEVLIGRTPEC-DVVLYDAGISRKHCRIFSLGERYFVED 59
Query: 65 LDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDE 112
+ S NGT +N P L + D I LG S + + D +E
Sbjct: 60 MGSSNGTKVNGA---PIKKQPLSDGDQIGLGPV-VFSFEALASDPGEE 103
>gi|422011967|ref|ZP_16358720.1| FHA domain protein [Actinomyces georgiae F0490]
gi|394762095|gb|EJF44395.1| FHA domain protein [Actinomyces georgiae F0490]
Length = 168
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ GP G + + I IGR + ++D+ SS+H + + W I+DL S
Sbjct: 77 LLLTGGPLVGTMLPLG-DAPIVIGR-SPACTLVLEDEYASSRHAALSPQADGWWIEDLSS 134
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGTF++ L +P L+ D I++G T
Sbjct: 135 RNGTFIDDERL--TSPHQLKVGDVIRIGQTT 163
>gi|415722824|ref|ZP_11469217.1| hypothetical protein CGSMWGv00703C2mash_00730 [Gardnerella
vaginalis 00703C2mash]
gi|388064296|gb|EIK86853.1| hypothetical protein CGSMWGv00703C2mash_00730 [Gardnerella
vaginalis 00703C2mash]
Length = 175
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDL 65
L+++ GP +G + +P S + +GR N V + D+ +SS H + W ++DL
Sbjct: 83 LVIIDGPLAGSSFPLEP-SGVTLGRSA-NNTVVLNDEFVSSHHARVYFNQSVNSWVLEDL 140
Query: 66 DSCNGTFLNST------TLPPNTP-------FDLR 87
S NGT + + LPP P F+LR
Sbjct: 141 GSTNGTMIGHSRVNEPVVLPPRKPVRIGATMFELR 175
>gi|320160548|ref|YP_004173772.1| hypothetical protein ANT_11380 [Anaerolinea thermophila UNI-1]
gi|319994401|dbj|BAJ63172.1| hypothetical protein ANT_11380 [Anaerolinea thermophila UNI-1]
Length = 150
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
+I +GR N TI+++ +SS+H + +W ++DL S NGTFLN
Sbjct: 66 EILVGRSASAN-YTIRNETVSSQHARLSYHHHQWWVEDLKSTNGTFLN 112
>gi|340793023|ref|YP_004758486.1| hypothetical protein CVAR_0066 [Corynebacterium variabile DSM
44702]
gi|340532933|gb|AEK35413.1| putative secreted protein [Corynebacterium variabile DSM 44702]
Length = 164
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L + GP +G T+ ++ +GR G + ++DD S H + W ++DLDS
Sbjct: 72 LALTSGPLTGTTLALAGYDEVTVGR-SSGCTLVLEDDFASGTHARLIRRGPDWYLEDLDS 130
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
NGTFL + + P LR ++G T
Sbjct: 131 RNGTFLAGQRI--DQPEPLRAGSEFRIGQTTV 160
>gi|355561656|gb|EHH18288.1| hypothetical protein EGK_14855, partial [Macaca mulatta]
Length = 483
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|329940708|ref|ZP_08289988.1| ABC transporter ATP-binding subunit [Streptomyces griseoaurantiacus
M045]
gi|329300002|gb|EGG43900.1| ABC transporter ATP-binding subunit [Streptomyces griseoaurantiacus
M045]
Length = 848
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 13 GPRSGETI-EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNG 70
G RS T +F G +RIGR + ND+ + D +S H + G+ I+DL S NG
Sbjct: 174 GDRSPTTFHQFSLGRVMRIGRALE-NDLVVSDLQVSRNHAEFHATPDGRLEIRDLGSHNG 232
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLGDCT 98
T++N +P L D + +G T
Sbjct: 233 TYVNGAPVPKGGSVQLGPTDVVGVGHST 260
>gi|126660449|ref|ZP_01731558.1| FHA domain containing protein [Cyanothece sp. CCY0110]
gi|126618262|gb|EAZ89022.1| FHA domain containing protein [Cyanothece sp. CCY0110]
Length = 252
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 44 DGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL--GDCTTIS 101
D +S H I + +G + I+D+ S NGT++N LPP LR D I L GD T
Sbjct: 189 DVVSRIHADIRNEAGIFYIEDVGSSNGTYINYNVLPPGNRHRLRPGDRISLGKGDLVTFV 248
Query: 102 VQM 104
Q+
Sbjct: 249 FQL 251
>gi|219669866|ref|YP_002460301.1| FHA domain-containing protein [Desulfitobacterium hafniense DCB-2]
gi|423074030|ref|ZP_17062764.1| FHA domain protein [Desulfitobacterium hafniense DP7]
gi|219540126|gb|ACL21865.1| FHA domain containing protein [Desulfitobacterium hafniense DCB-2]
gi|361855124|gb|EHL07126.1| FHA domain protein [Desulfitobacterium hafniense DP7]
Length = 267
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGN-DVTIKDDGISSKHLIIESVSGKWTIQDLDSC 68
+++GP SG+T + + I IGR G ++ ++D +S +HL + S W I DL S
Sbjct: 178 IIQGPDSGKTFPLEEET-IHIGR--HGQCEIVLQDPEVSRRHLKLSSDGEDWVIDDLGST 234
Query: 69 NGTFLN 74
NGT+LN
Sbjct: 235 NGTWLN 240
>gi|358374128|dbj|GAA90722.1| FHA domain protein [Aspergillus kawachii IFO 4308]
Length = 592
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH ++G+W I+D+ S +GTFLN L PN P + +++ D ++L
Sbjct: 270 VGFKSKVVSRKHCEFLYLNGQWHIKDVGSSSGTFLNHMRLSQPNMPSRLYTVKDGDIVQL 329
Query: 95 G 95
G
Sbjct: 330 G 330
>gi|332255677|ref|XP_003276959.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Nomascus
leucogenys]
Length = 486
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|253999961|ref|YP_003052024.1| FHA domain-containing protein [Methylovorus glucosetrophus
SIP3-4]
gi|253986640|gb|ACT51497.1| FHA domain containing protein [Methylovorus glucosetrophus
SIP3-4]
Length = 232
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+RIGR R ND+ I + IS +H + S+ +QDLDS NGT +N + + L+
Sbjct: 23 LRIGR-RRDNDIAIDNLMISGEHAQVMSIGRNALLQDLDSTNGTMINGVRVKQHV---LQ 78
Query: 88 ENDTIKLG 95
D I LG
Sbjct: 79 HGDIIMLG 86
>gi|253573734|ref|ZP_04851077.1| forkhead-associated protein [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251847262|gb|EES75267.1| forkhead-associated protein [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 228
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 22 FKPGSKIR-------IGRIVRGN--DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTF 72
F+PG+ I IGR + D+ + IS KHL+I + DL S +GT
Sbjct: 15 FRPGTCIYLDQETTEIGRTSSESFPDMAFTNIFISRKHLMIRKEGDRAVAYDLGSRHGTE 74
Query: 73 LNSTTLPPNTPFDLRENDTIKLGDCTTI 100
LN + P+ P+ L ND +KL T++
Sbjct: 75 LNGVRMIPHAPYVLETNDILKLARGTSV 102
>gi|134299566|ref|YP_001113062.1| FHA domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052266|gb|ABO50237.1| FHA domain containing protein [Desulfotomaculum reducens MI-1]
Length = 168
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 15 RSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
+SGE F+ G ++GR RGN + + S +H I G++ I+DL S N T+LN
Sbjct: 76 KSGEI--FQLGDITKLGR-GRGNHIILDGHYASQEHACILYKQGQYWIEDLGSLNHTYLN 132
Query: 75 STTLPPNTPFDLRENDTIKLGDC 97
+ + T L D I++GD
Sbjct: 133 NVPIKKQTV--LANGDQIQIGDV 153
>gi|402866878|ref|XP_003897600.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Papio anubis]
Length = 486
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|425437111|ref|ZP_18817538.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9432]
gi|389677992|emb|CCH93123.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9432]
Length = 358
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
S IGR + ND+ IKD IS H I++S +G + + DL S NGTF+N + + P
Sbjct: 42 SYWTIGR-GKDNDIVIKDHCISRNHAILQSTETGDFYLIDLGSLNGTFVNGRRV--SIPV 98
Query: 85 DLRENDTIKLG 95
+ D I G
Sbjct: 99 TIHNTDQITFG 109
>gi|384564011|ref|ZP_10011115.1| FHA domain-containing protein [Saccharomonospora glauca K62]
gi|384519865|gb|EIE97060.1| FHA domain-containing protein [Saccharomonospora glauca K62]
Length = 167
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++ G +G I G I IGR + + + DD S++H + G+W ++DL
Sbjct: 75 QLVVTHGALAGTRIALD-GRPILIGR-ADDSTLVLDDDYASTRHARLSLRGGEWYVEDLG 132
Query: 67 SCNGTFLN--STTLPPNTPF 84
S NGTFL+ T P P
Sbjct: 133 STNGTFLDRAKVTAPQKVPI 152
>gi|297526264|ref|YP_003668288.1| FHA domain containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255180|gb|ADI31389.1| FHA domain containing protein [Staphylothermus hellenicus DSM
12710]
Length = 116
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
+PG + +GR ND+ I D +S +H I +G+W I+DLDS NGT +++ +
Sbjct: 31 LEPGEYV-LGR-YPTNDIVIPDPYVSRRHARIFYENGEWHIEDLDSTNGTIVDNEDIRGK 88
Query: 82 TPFDLRENDTIKLGDCTTISVQMITMDSQD 111
P + N I +G TI I +SQ+
Sbjct: 89 GPKKINNNSEIVVG--LTILSATIKEESQE 116
>gi|111221032|ref|YP_711826.1| ABC transporter ATP-binding protein [Frankia alni ACN14a]
gi|111148564|emb|CAJ60237.1| putative ABC transporter ATP-binding protein [Frankia alni ACN14a]
Length = 851
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
++ IGR R D I D +S +HL++E W ++D+ S NGT+++ +P + P
Sbjct: 21 AQFIIGR-ARTADYVIADSRVSRRHLLLEQAGSGWVVRDI-SSNGTWIDGQRMPESVP-- 76
Query: 86 LRENDTIKLGDCTTISVQMITMDSQ-----DESVAKPKRNPRRQA-NVPGTSSVRATSGR 139
+ + ++LG T V + Q DE P + + N G S R TSGR
Sbjct: 77 VHDEVRLRLGTPTGPEVVVHPEFPQGRGPIDEPAYDPGYDMQTMLPNAAGYSPPRPTSGR 136
>gi|68066817|ref|XP_675382.1| fork head domain protein [Plasmodium berghei strain ANKA]
gi|56494535|emb|CAH93609.1| fork head domain protein, putative [Plasmodium berghei]
Length = 281
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQ----DLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
D+ +++ IS +H +I+ + I DL+S NG++LN+ + PN ++LRE D ++
Sbjct: 201 DIILRNISISKQHAVIQFKKHENKILPFLIDLNSTNGSYLNNEKIDPNKFYELRETDLLR 260
Query: 94 LG 95
G
Sbjct: 261 FG 262
>gi|338530088|ref|YP_004663422.1| sigma-54 dependent transcription regulator [Myxococcus fulvus
HW-1]
gi|337256184|gb|AEI62344.1| sigma-54 dependent transcription regulator [Myxococcus fulvus
HW-1]
Length = 454
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
L+++ R+G +R+G+ NDV I +S HL++ ++ +QDL
Sbjct: 29 FHLVLLDTERAGTVFPLA-NDALRVGKAA-DNDVVIDHPTVSRNHLVVRRQGDRFLVQDL 86
Query: 66 DSCNGTFLN 74
S NGTFL+
Sbjct: 87 GSTNGTFLD 95
>gi|444307742|ref|ZP_21143461.1| FHA domain-containing protein [Arthrobacter sp. SJCon]
gi|443479925|gb|ELT42901.1| FHA domain-containing protein [Arthrobacter sp. SJCon]
Length = 160
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
+L++V GP G ++ S I +GR + + ++DD S +H + +W I+DL
Sbjct: 68 QLVVVEGPLKGTSVPLA-ASPILLGR-AQEATLVLEDDYASGRHARLFPQGSRWFIEDLG 125
Query: 67 SCNGTFL 73
S NGT+L
Sbjct: 126 STNGTYL 132
>gi|374855166|dbj|BAL58030.1| FHA domain-containing protein [uncultured Chloroflexi bacterium]
Length = 169
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 28 IRIGRIVRGNDVTIKDD---------GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78
I +GR+ +DV + D G+S +H I G I+DL S NGTF+N L
Sbjct: 84 IHLGRLDPASDVFPEIDLTNDNGLEKGVSRRHARILKREGTVVIEDLGSINGTFVNGKRL 143
Query: 79 PPNTPFDLRENDTIKLGDCTTISVQM 104
P P L + D ++LG I V+M
Sbjct: 144 APYLPEVLHDGDQLQLGK-LFIQVEM 168
>gi|115375628|ref|ZP_01462885.1| ggdef family protein [Stigmatella aurantiaca DW4/3-1]
gi|310823179|ref|YP_003955537.1| FHA/GGDEF domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115367404|gb|EAU66382.1| ggdef family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396251|gb|ADO73710.1| FHA/GGDEF domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 303
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 41 IKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
++DDGIS KH + S+ G++ + DL S NGT+LN L NT L + D I++G T
Sbjct: 59 VEDDGISRKHAKVVSLGDGRFQLMDLGSTNGTYLNG--LRVNTA-PLYDGDKIQIGSNTV 115
Query: 100 ISVQM 104
+ +
Sbjct: 116 LKFSI 120
>gi|426353001|ref|XP_004043990.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Gorilla
gorilla gorilla]
Length = 486
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|392588131|gb|EIW77464.1| hypothetical protein CONPUDRAFT_139331 [Coniophora puteana
RWD-64-598 SS2]
Length = 813
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I G +I+IGR V + +G +S +H + +
Sbjct: 17 PALYLYPLNDTFVPKHICLAGGQRIKIGRQTNAKSVPGERNGYFDSKVLSRQHAEVWEEA 76
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNT----PFDLRENDTIKLG 95
K I+D+ S NGTF+N L P + PF+L+ +D ++ G
Sbjct: 77 NKIFIKDVKSSNGTFINGERLSPESVESEPFELKSDDIVEFG 118
>gi|323456515|gb|EGB12382.1| hypothetical protein AURANDRAFT_61167 [Aureococcus anophagefferens]
Length = 512
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 15 RSGETIEFKP--GSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGT 71
++G ++E P S+ +GR + IS HL+ + S G+ + D S +G+
Sbjct: 3 KNGTSVETVPLTASRFLLGRAADCVAYAMAHASISRVHLVFQRSNDGRLYVADCGSAHGS 62
Query: 72 FLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTS 131
LN LPP + R D ++LG T V I QD + N + + GT
Sbjct: 63 RLNKAPLPPLKYVEARGGDVLQLGAST--RVLAIHAAGQDRAARALLENEDVRLDASGTF 120
Query: 132 SV 133
+V
Sbjct: 121 AV 122
>gi|291544251|emb|CBL17360.1| FOG: FHA domain [Ruminococcus champanellensis 18P13]
Length = 145
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ +KD S H ++ G W I DL+S GT++N + + L END I++G
Sbjct: 80 DIQLKDATASRYHALLTVCDGVWRITDLNSAGGTYVNGKRI---SSVRLHENDRIRIGAT 136
Query: 98 T 98
T
Sbjct: 137 T 137
>gi|160946165|ref|ZP_02093376.1| hypothetical protein PEPMIC_00127 [Parvimonas micra ATCC 33270]
gi|335048356|ref|ZP_08541376.1| FHA domain protein [Parvimonas sp. oral taxon 110 str. F0139]
gi|158447688|gb|EDP24683.1| FHA domain protein [Parvimonas micra ATCC 33270]
gi|333758156|gb|EGL35714.1| FHA domain protein [Parvimonas sp. oral taxon 110 str. F0139]
Length = 168
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I D IS KH+ I G + I+DL S NGT LN P +L++ D I +G
Sbjct: 98 NDIVINDKFISKKHMRIIKEDGIYYIEDLGSANGTLLNGE--PITEAIELKDKDLIDVG 154
>gi|145249578|ref|XP_001401128.1| FHA domain protein [Aspergillus niger CBS 513.88]
gi|134081811|emb|CAK42066.1| unnamed protein product [Aspergillus niger]
Length = 588
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH ++G+W I+D+ S +GTFLN L PN P + +++ D ++L
Sbjct: 267 VGFKSKVVSRKHCEFLYLNGQWHIKDVGSSSGTFLNHMRLSQPNMPSRLYTVKDGDIVQL 326
Query: 95 G 95
G
Sbjct: 327 G 327
>gi|108763000|ref|YP_632815.1| FHA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108466880|gb|ABF92065.1| FHA domain protein [Myxococcus xanthus DK 1622]
Length = 484
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
+ L + +G + G + F+ +++ IGR ND+ + D G+S +H I K+ + D+
Sbjct: 3 ILLTITQGLQQGRELTFE-AAEVNIGRTSE-NDLVLHDHGVSRRHARIVLRGDKYFVADM 60
Query: 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKR 119
S NGT LN L LR+ D I +G V + DE +P R
Sbjct: 61 GSSNGTVLNGGLLSGEQ--QLRDGDKIGVGPVEFTFVWVPP--EGDEDATRPIR 110
>gi|296164688|ref|ZP_06847254.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899996|gb|EFG79436.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 887
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F G+ + IGR +R DV + IS HLI+ G+W D S NG F+N +P
Sbjct: 13 FAAGNDVAIGRDLRA-DVRVAHPLISRTHLIVRFDQGRWIAIDNGSLNGLFVNHQRVP-- 69
Query: 82 TPFDLRENDTIKLGD 96
D+++ + +G+
Sbjct: 70 -TVDIQDGTRVNIGN 83
>gi|336261930|ref|XP_003345751.1| hypothetical protein SMAC_05908 [Sordaria macrospora k-hell]
gi|380090087|emb|CCC12170.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 353
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG------- 58
+L + +G +TIE S +GR + D+ + IS +H +I+
Sbjct: 237 WRLYVFKGDEVIDTIELHTRSCWLVGRDLTIADLPAEHPSISKQHAVIQFRYTEKRNEYG 296
Query: 59 ------KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105
K + DL+S NGT LN +P + +LR+ D I+ G T V M+
Sbjct: 297 DKIGRVKPYLIDLESANGTKLNGDKVPDSRYLELRDKDMIQFGSSTREYVLML 349
>gi|388453485|ref|NP_001252758.1| ring finger protein 8, E3 ubiquitin protein ligase [Macaca mulatta]
gi|380817740|gb|AFE80744.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Macaca mulatta]
gi|383422609|gb|AFH34518.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Macaca mulatta]
Length = 486
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|89895435|ref|YP_518922.1| hypothetical protein DSY2689 [Desulfitobacterium hafniense Y51]
gi|219669865|ref|YP_002460300.1| FHA domain-containing protein [Desulfitobacterium hafniense DCB-2]
gi|423074029|ref|ZP_17062763.1| FHA domain protein [Desulfitobacterium hafniense DP7]
gi|89334883|dbj|BAE84478.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540125|gb|ACL21864.1| FHA domain containing protein [Desulfitobacterium hafniense DCB-2]
gi|361855123|gb|EHL07125.1| FHA domain protein [Desulfitobacterium hafniense DP7]
Length = 149
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
++IGR + NDV + D S H+++ G T++DL S NGT++N + ++P L
Sbjct: 69 LKIGR-GKNNDVVLADHFASMDHVLVRHHKGVTTLEDLGSTNGTWVNGERI--SSPVQLV 125
Query: 88 ENDTIKLGDCT 98
D +K+G T
Sbjct: 126 AGDYVKIGSIT 136
>gi|40788314|dbj|BAA31621.2| KIAA0646 protein [Homo sapiens]
Length = 486
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 60 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 110
>gi|345315312|ref|XP_001511244.2| PREDICTED: E3 ubiquitin-protein ligase RNF8-like, partial
[Ornithorhynchus anatinus]
Length = 567
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H I+ ++ G WT+ D S NG +LN + P + ++E D I+LG
Sbjct: 22 ISRNHCILRQNAEGLWTVMDNKSLNGVWLNKERIDPLRAYPIQEGDYIQLG 72
>gi|334310978|ref|XP_001372442.2| PREDICTED: protein KIAA0284-like [Monodelphis domestica]
Length = 1718
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 25 GSKIRIGR--IVRGND---VTIKDDGISSKHLIIESVSGK---WTIQDLDSCNGTFLNST 76
G++ R+ R I G D + ++ + +H +I K W ++DL S NGTF+N
Sbjct: 13 GTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYNQDKDEHW-VKDLGSLNGTFVNDV 71
Query: 77 TLPPNTPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVR 134
+P L+ ND I+ G D ++ + +E++ K + Q N GT+ R
Sbjct: 72 RIPDQKYVTLKLNDVIRFGYDSNLYVLEHVQHKVPEEALKHEKYTSQLQMNFKGTTVKR 130
>gi|227496581|ref|ZP_03926861.1| FHA domain protein [Actinomyces urogenitalis DSM 15434]
gi|226833901|gb|EEH66284.1| FHA domain protein [Actinomyces urogenitalis DSM 15434]
Length = 156
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDS 67
L++ GP +G T+ P S I IGR + ++D SS+H I G W ++DL S
Sbjct: 65 LVITEGPLAGSTVPLSPTS-ITIGR-SPSCTLVLEDSYASSRHARIFPKDGTWWLEDLGS 122
Query: 68 CNGTFL 73
NGT L
Sbjct: 123 TNGTTL 128
>gi|172039655|ref|YP_001806156.1| FraH-like protein [Cyanothece sp. ATCC 51142]
gi|354552092|ref|ZP_08971400.1| FHA domain containing protein [Cyanothece sp. ATCC 51472]
gi|171701109|gb|ACB54090.1| FraH-like protein [Cyanothece sp. ATCC 51142]
gi|353555414|gb|EHC24802.1| FHA domain containing protein [Cyanothece sp. ATCC 51472]
Length = 213
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 44 DGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL--GDCTTIS 101
D +S H I + +G + I+D+ S NGT++N LPP LR D I L GD T
Sbjct: 150 DVVSRIHADIRNEAGIFYIEDVGSSNGTYINYNALPPGNRHRLRPGDRISLGKGDLVTFV 209
Query: 102 VQM 104
Q+
Sbjct: 210 FQL 212
>gi|159028924|emb|CAO87385.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 344
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
S IGR + ND+ IKD IS H I++S +G + + DL S NGTF+N + + P
Sbjct: 28 SYWTIGR-GKDNDIVIKDHCISRNHAILQSTETGDFYLIDLGSLNGTFVNGRRV--SIPV 84
Query: 85 DLRENDTIKLG 95
+ D I G
Sbjct: 85 TIHNTDQITFG 95
>gi|428781393|ref|YP_007173179.1| multidrug ABC transporter ATPase [Dactylococcopsis salina PCC 8305]
gi|428695672|gb|AFZ51822.1| ABC-type multidrug transport system, ATPase component
[Dactylococcopsis salina PCC 8305]
Length = 919
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNS 75
E F+ G I IGR + ND+ + D +S H L+IE + I DL+S NGT++N
Sbjct: 15 ELFTFEEG-IINIGR-NQDNDLILNDLQVSGNHAQLVIEE--NRCFIIDLNSSNGTYVNG 70
Query: 76 TTLPPNTPFDLRENDTIKLGD-CTTISVQMITMDSQDESV 114
+ ++L E+DTI++G+ C Q ++S E++
Sbjct: 71 EPIASREHWELHEDDTIQIGEKC----FQFRFLNSSQETI 106
>gi|395324314|gb|EJF56757.1| hypothetical protein DICSQDRAFT_141010 [Dichomitus squalens
LYAD-421 SS1]
Length = 826
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLIIESVS 57
P + L + + I +++IGR V + +G +S +H + +
Sbjct: 15 PALYLYPLNDSFVPKHISLVNSQRVKIGRQTNAKTVPAERNGYFDSKVLSRQHAEVWEEN 74
Query: 58 GKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
GK I+D+ S NGTF+N L P + P++L+ +D ++ G
Sbjct: 75 GKIFIKDVKSSNGTFINGERLSPEGLESEPYELKTDDIVEFG 116
>gi|30584345|gb|AAP36421.1| Homo sapiens ring finger protein (C3HC4 type) 8 [synthetic
construct]
gi|60653067|gb|AAX29228.1| ring finger protein 8 [synthetic construct]
Length = 486
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>gi|358447554|ref|ZP_09158074.1| FHA domain-containing protein [Corynebacterium casei UCMA 3821]
gi|356606486|emb|CCE56445.1| FHA domain-containing protein [Corynebacterium casei UCMA 3821]
Length = 153
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 10 MVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCN 69
++ GP +G + +GR + D + DD SS+H + +W ++DL+S N
Sbjct: 63 IIDGPLAGSHMALSGLEDFTLGR-AQDCDFVLGDDYASSRHARLFRRGSQWFVEDLESRN 121
Query: 70 GTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
GTF+ + + + P + N IKLG T
Sbjct: 122 GTFVGGSRI--DQPEHVGVNTDIKLGRSTV 149
>gi|397496211|ref|XP_003818935.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Pan
paniscus]
gi|343961665|dbj|BAK62422.1| ubiquitin ligase protein RNF8 [Pan troglodytes]
gi|410221114|gb|JAA07776.1| ring finger protein 8 [Pan troglodytes]
gi|410258382|gb|JAA17158.1| ring finger protein 8 [Pan troglodytes]
gi|410306572|gb|JAA31886.1| ring finger protein 8 [Pan troglodytes]
gi|410341001|gb|JAA39447.1| ring finger protein 8 [Pan troglodytes]
Length = 485
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + +++ D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIQQGDYIQLG 109
>gi|417750618|ref|ZP_12398973.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336457781|gb|EGO36775.1| ABC-type multidrug transport system, ATPase component
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 834
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGD 96
DV I D IS HLI+ G+W D S NGT+LN +P D+ + +I +G+
Sbjct: 4 DVRIPDPRISRAHLILRFEQGRWLAIDNGSLNGTYLNGYRMP---VVDIHDGQSIHVGN 59
>gi|325266101|ref|ZP_08132786.1| protein kinase [Kingella denitrificans ATCC 33394]
gi|324982438|gb|EGC18065.1| protein kinase [Kingella denitrificans ATCC 33394]
Length = 562
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLDSCNGTFLNS-- 75
I PG +RIGR GNDV I +S H I +G ++DL S NG+F++S
Sbjct: 476 AIALYPGQTVRIGR-NSGNDVVINRQQVSGSHCRISVDATGNVVLEDLQSTNGSFVDSLE 534
Query: 76 -----TTLPPNTPFDLREND 90
TTL P L D
Sbjct: 535 QRISRTTLRPGQTIYLANRD 554
>gi|83589758|ref|YP_429767.1| FHA domain-containing protein [Moorella thermoacetica ATCC 39073]
gi|83572672|gb|ABC19224.1| FHA domain containing protein [Moorella thermoacetica ATCC 39073]
Length = 252
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT 61
E P +KL ++ GP +G T + G ++ +GR D + D+ +S +H +E +
Sbjct: 155 EEPALKLAVLEGPDAGRTFLLQKGRQV-LGR-QPACDFVLTDEQVSRRHCQVEESHDRVL 212
Query: 62 IQDLDSCNGTFLN 74
+ DL S NGT +N
Sbjct: 213 VTDLGSRNGTMVN 225
>gi|407981413|ref|ZP_11162113.1| FHA domain protein [Mycobacterium hassiacum DSM 44199]
gi|407376992|gb|EKF25908.1| FHA domain protein [Mycobacterium hassiacum DSM 44199]
Length = 489
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + G I I RG D + D G+S +HL I +QDL+S NGT +
Sbjct: 406 SGRTYQLREGVNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLQDLNSTNGTTV 461
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 462 NNA---PVQEWQLADGDVIRLGHSEII 485
>gi|392591662|gb|EIW80989.1| SMAD FHA domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 224
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 2 EPP-------GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLII- 53
EPP G +L + +G E + S IGR D+ I S +H ++
Sbjct: 97 EPPEARTPLLGWRLYVFKGQDQVELLHINRQSAYLIGRDKTVADIFIDHPSSSKQHAVVQ 156
Query: 54 --------ESVSGKWTIQ----DLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
E S K I+ DL+S NGT +N +P + ++LR +D IK G T
Sbjct: 157 HRQVQERDEFGSTKAVIKPFIIDLESTNGTHVNGEQIPTSRFYELRASDVIKFGLST 213
>gi|405355283|ref|ZP_11024509.1| sigma-54 dependent transcriptional regulator, Fis family
[Chondromyces apiculatus DSM 436]
gi|397091625|gb|EJJ22427.1| sigma-54 dependent transcriptional regulator, Fis family
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 454
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDL 65
L+++ R+G +R+G+ NDV I +S HL++ ++ +QDL
Sbjct: 29 FHLVLLDTERAGTVFPLA-NEALRVGKAA-DNDVVIDHPTVSRNHLVVRRQGDRFLVQDL 86
Query: 66 DSCNGTFLN 74
S NGTFL+
Sbjct: 87 GSTNGTFLD 95
>gi|374296897|ref|YP_005047088.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
gi|359826391|gb|AEV69164.1| FHA domain-containing protein [Clostridium clariflavum DSM 19732]
Length = 527
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLREN 89
IGR+ D ++ I H I + G + ++DL+S NGT++N + N ++++ N
Sbjct: 453 IGRLEGQVDYVHTNNAIGKVHAEIITRDGCYYLKDLNSKNGTYINGKRIDSNKEYEIKNN 512
Query: 90 DTIKLGDCTTISVQM 104
D I L + I + M
Sbjct: 513 DRITLANSEFIFIVM 527
>gi|198417662|ref|XP_002120272.1| PREDICTED: similar to centrosomal protein 170kDa [Ciona
intestinalis]
Length = 370
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--VSGKWTIQDLDSCNGTFL 73
S E++ P + IGR + ++ +K + +H ++ + + I+DL S NGTF+
Sbjct: 8 SDESVHRLPNEMLFIGR--QDCELILKSKSVDKQHAVMNYDIIQQAFRIKDLGSLNGTFV 65
Query: 74 NSTTLPPNTPFDLRENDTIKLG 95
N T LP ++E D I+ G
Sbjct: 66 NETRLPEQVYITMKEGDVIRFG 87
>gi|251797050|ref|YP_003011781.1| winged helix family two component transcriptional regulator
[Paenibacillus sp. JDR-2]
gi|247544676|gb|ACT01695.1| putative two component transcriptional regulator, winged helix
family [Paenibacillus sp. JDR-2]
Length = 232
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC 97
D+ + IS +H++I + K + D S +GT +N + P+ P+ L D IKL +
Sbjct: 40 DIAFTNPFISRQHIVIRKENDKAVLYDKGSLHGTEINGERVKPHRPYPLNNFDIIKLAN- 98
Query: 98 TTISVQMITMDSQDESVAKPKRNPRRQANVPG 129
+SV + D+++ + RQ +PG
Sbjct: 99 -GMSVLHFSYVFADQTLELEPLSITRQLEIPG 129
>gi|313201934|ref|YP_004040592.1| fha domain-containing protein [Methylovorus sp. MP688]
gi|312441250|gb|ADQ85356.1| FHA domain containing protein [Methylovorus sp. MP688]
Length = 232
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87
+RIGR R ND+ I + IS +H + S+ +QDLDS NGT +N + + L+
Sbjct: 23 LRIGR-RRDNDIAIDNLMISGEHAQVMSIGRNALLQDLDSTNGTMINGVRVKQHV---LQ 78
Query: 88 ENDTIKLG 95
D I LG
Sbjct: 79 HGDIIMLG 86
>gi|162455898|ref|YP_001618265.1| adenylate cyclase [Sorangium cellulosum So ce56]
gi|161166480|emb|CAN97785.1| Adenylate cyclase [Sorangium cellulosum So ce56]
Length = 659
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
N + + D +S +H IIE + ++DL S NGTF+NS + P L+ D I LG
Sbjct: 61 NSIQLLDKIVSKEHCIIEQRGDHFVLRDLGSLNGTFINSERVRGEAP--LKHGDEIALG 117
>gi|119961072|ref|YP_945864.1| FHA domain-containing protein [Arthrobacter aurescens TC1]
gi|403525129|ref|YP_006660016.1| FHA domain protein [Arthrobacter sp. Rue61a]
gi|119947931|gb|ABM06842.1| putative FHA domain protein [Arthrobacter aurescens TC1]
gi|403227556|gb|AFR26978.1| putative FHA domain protein [Arthrobacter sp. Rue61a]
Length = 162
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 3 PPGMK----LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG 58
PP ++ L++ GP G T+ S I +GR + + ++DD S +H +
Sbjct: 62 PPAIQHARTLVVTEGPLKGTTVPLA-ASPILLGR-AQEATLVLEDDYASGRHARLFPQGS 119
Query: 59 KWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
+W I+DL S NGT+L L P +L
Sbjct: 120 RWFIEDLGSTNGTYLADQQLTRALPVEL 147
>gi|455644301|gb|EMF23403.1| ABC transporter ATP-binding protein [Streptomyces gancidicus BKS
13-15]
Length = 848
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 11 VRGPRSGETI-EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSC 68
V G RS T +F G +RIGR + ND+ + D +S H S G+ I+DL S
Sbjct: 172 VYGDRSPTTFHQFSLGRVMRIGRALE-NDLVVSDLQVSRNHAEFHSTPDGRMEIRDLGSH 230
Query: 69 NGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
NGT++N +P L D + +G T
Sbjct: 231 NGTYVNGQPIPKGGSQLLGPTDIVGVGHST 260
>gi|407941345|ref|YP_006856986.1| FHA domain-containing protein [Acidovorax sp. KKS102]
gi|407899139|gb|AFU48348.1| FHA domain-containing protein [Acidovorax sp. KKS102]
Length = 216
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 37 NDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
ND+ I + +S +H ++ V I+DL S NGT++N+ + +LR DT+++G
Sbjct: 31 NDIVIDNLAVSGEHAVLHMVGHDVEIEDLGSTNGTYVNAKAVKRQ---ELRNGDTVEVG 86
>gi|300857457|ref|YP_003782440.1| hypothetical protein cpfrc_00040 [Corynebacterium
pseudotuberculosis FRC41]
gi|375287623|ref|YP_005122164.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
3/99-5]
gi|383313232|ref|YP_005374087.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
P54B96]
gi|384503647|ref|YP_005680317.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1002]
gi|384505738|ref|YP_005682407.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
C231]
gi|384507830|ref|YP_005684498.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
I19]
gi|384509926|ref|YP_005689504.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
PAT10]
gi|385806480|ref|YP_005842877.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
267]
gi|387135598|ref|YP_005691578.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|300684911|gb|ADK27833.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302205193|gb|ADL09535.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
C231]
gi|302329752|gb|ADL19946.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
1002]
gi|308275435|gb|ADO25334.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
I19]
gi|341823865|gb|AEK91386.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
PAT10]
gi|348606043|gb|AEP69316.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
42/02-A]
gi|371574912|gb|AEX38515.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
3/99-5]
gi|380868733|gb|AFF21207.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
P54B96]
gi|383803873|gb|AFH50952.1| FHA domain-containing protein [Corynebacterium pseudotuberculosis
267]
Length = 159
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLD 66
++++V GP G ++ +I +GR + + DD S++H + +W ++DLD
Sbjct: 66 QIVIVEGPLMGSRLDLGSLDEITLGR-AKECTFVVGDDYASARHARLIKRGNEWFVEDLD 124
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTT 99
S NGTF+ + + P + IK+G T
Sbjct: 125 SRNGTFVGGYRI--DQPEKISTGSDIKIGRTTV 155
>gi|443490550|ref|YP_007368697.1| conserved transmembrane ATP-binding protein ABC transporter
[Mycobacterium liflandii 128FXT]
gi|442583047|gb|AGC62190.1| conserved transmembrane ATP-binding protein ABC transporter
[Mycobacterium liflandii 128FXT]
Length = 884
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81
F G + IGR +R DV + D IS HL++ G+W D S NG ++N+ +P
Sbjct: 28 FAAGHDVVIGRDLRA-DVRVADPLISRVHLLLRFDQGRWIAIDNGSLNGLYINNRRVP-- 84
Query: 82 TPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKK 141
D+++ + +G+ ++ Q SV +P Q P SG
Sbjct: 85 -VVDIQDGQRVNIGNPDGPALDFGVGRRQQGSVGRPPPTAVMQVPPP------MPSGAWP 137
Query: 142 AEAEPVETLG 151
++A P L
Sbjct: 138 SQAPPANRLA 147
>gi|220916013|ref|YP_002491317.1| FHA domain-containing protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953867|gb|ACL64251.1| FHA domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 122
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 36 GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
GN V I D S +H I G + DLDS NGTFLNS + T LR D +++
Sbjct: 56 GNTVVIGSDQASRRHARIFVSGGVHVLVDLDSTNGTFLNSKQVKEQT---LRHGDVLRI 111
>gi|15826885|ref|NP_301148.1| hypothetical protein ML0022 [Mycobacterium leprae TN]
gi|221229363|ref|YP_002502779.1| hypothetical protein MLBr_00022 [Mycobacterium leprae Br4923]
gi|13092432|emb|CAC29530.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932470|emb|CAR70115.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 488
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTI 62
G +I+ SG T + + GS I + RG D + D G+S +HL I +
Sbjct: 394 GSAVILQLDDGSGRTYQLREGSNI----VGRGQDAQFRLPDTGVSRRHLEIRWDGQVALL 449
Query: 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTI 100
DL+S NGT +N+ P + L + D I+LG I
Sbjct: 450 SDLNSTNGTTVNNA---PVQEWQLADGDVIRLGHSEII 484
>gi|406935048|gb|EKD69130.1| hypothetical protein ACD_47C00247G0001, partial [uncultured
bacterium]
Length = 149
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 27 KIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDL 86
++ IGR+ D+ +K + +S H I W ++D +S NG ++N+T + ++P L
Sbjct: 21 QLIIGRM-SDCDIVLKSNSVSRNHAKIYIKDTLWFLEDTNSTNGVYVNNTKI--DSPLAL 77
Query: 87 RENDTIKLGDCTTISVQMIT--MDSQDESVAKPKRNPRRQA 125
D IK+G+ S++ I D+ D +V N R A
Sbjct: 78 MHKDLIKIGES---SLEFIDEEFDAIDGAVNSIASNFHRHA 115
>gi|350639560|gb|EHA27914.1| hypothetical protein ASPNIDRAFT_201697 [Aspergillus niger ATCC
1015]
Length = 406
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 39 VTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP-PNTP---FDLRENDTIKL 94
V K +S KH ++G+W I+D+ S +GTFLN L PN P + +++ D ++L
Sbjct: 112 VGFKSKVVSRKHCEFLYLNGQWHIKDVGSSSGTFLNHMRLSQPNMPSRLYTVKDGDIVQL 171
Query: 95 G 95
G
Sbjct: 172 G 172
>gi|254489058|ref|ZP_05102262.1| type VI secretion system FHA domain protein [Roseobacter sp.
GAI101]
gi|214042066|gb|EEB82705.1| type VI secretion system FHA domain protein [Roseobacter sp.
GAI101]
Length = 544
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)
Query: 25 GSKIRIGRIVRGNDVTIKDD--GISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82
G+ I++GR ND + D IS H + G++ + DL S NGTFLN +
Sbjct: 26 GTSIKVGRRAE-NDWILPDQTRHISGTHFDVLWEDGRYILHDL-STNGTFLNGSKQRIEG 83
Query: 83 PFDLRENDTIKLGDCTTISVQMITM--------DSQDESVAKPKRNPRRQANVP-GTSSV 133
P L + D I +G I ++ + +S DE+ P+ P+ +N G+ +V
Sbjct: 84 PHPLTDGDRIHVG-LYVIHARLRPIVDPVTQAEESVDEATQPPRSRPQSASNAAQGSRAV 142
Query: 134 RATSG 138
+A G
Sbjct: 143 QAPPG 147
>gi|449481064|ref|XP_004156071.1| PREDICTED: protein phosphatase 2C 70-like [Cucumis sativus]
Length = 580
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTL-PPNT-- 82
+ +GR+ + +D+ +KD +S KH +I+ S KW + DL S NGT LNS + P++
Sbjct: 199 LTLGRVPQ-SDLQLKDSEVSGKHALIKWNLNSMKWELVDLGSLNGTLLNSQPINNPDSGS 257
Query: 83 -----PFDLRENDTIKLGDCTTISVQM 104
P +L D I G + + V +
Sbjct: 258 RHWGEPVELASGDVITFGTTSKVYVHI 284
>gi|357407915|ref|YP_004919838.1| DNA segregation ATPase FtsK [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386353092|ref|YP_006051339.1| FHA domain containing protein [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337762864|emb|CCB71572.1| DNA segregation ATPase, FtsK/SpoIIIE family [Streptomyces cattleya
NRRL 8057 = DSM 46488]
gi|365811171|gb|AEW99386.1| FHA domain containing protein [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 1405
Score = 41.6 bits (96), Expect = 0.54, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIE-SVSGKWTIQDLD 66
L +V G +G +PG + +GR N V + DG+S +H ++E G+ T+ DL
Sbjct: 81 LRVVGGLEAGRAYPLRPGRTV-VGRGAEAN-VRVTADGVSRRHAVVEVGADGRVTVDDLA 138
Query: 67 SCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
S NGT +N+ + P + +D + LG
Sbjct: 139 SANGTDVNAERIA--GPVAVGPDDLVSLG 165
>gi|338534291|ref|YP_004667625.1| type II/IV secretion system protein [Myxococcus fulvus HW-1]
gi|337260387|gb|AEI66547.1| type II/IV secretion system protein [Myxococcus fulvus HW-1]
Length = 593
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFD 85
+++ IGR+ GND+ + +S H I + GK+ I D+ S NGTF+N + P
Sbjct: 21 NEVTIGRL-PGNDIILAKGNVSKYHSRIVAKDGKFIIVDMKSTNGTFVNGKKIA--APQV 77
Query: 86 LRENDTIKLGD 96
L+ D + +GD
Sbjct: 78 LKPTDQVYIGD 88
>gi|383305957|ref|YP_005358768.1| hypothetical protein MRGA327_00130, partial [Mycobacterium
tuberculosis RGTB327]
gi|380719910|gb|AFE15019.1| hypothetical protein MRGA327_00130 [Mycobacterium tuberculosis
RGTB327]
Length = 194
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 111 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 166
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 167 NNA---PVQEWQLADGDVIRLGHSEII 190
>gi|197121309|ref|YP_002133260.1| FHA domain-containing protein [Anaeromyxobacter sp. K]
gi|196171158|gb|ACG72131.1| FHA domain containing protein [Anaeromyxobacter sp. K]
Length = 122
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 36 GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
GN V I D S +H I G + DLDS NGTFLNS + T LR D +++
Sbjct: 56 GNTVVIGSDQASRRHARIFVSGGVHVLVDLDSTNGTFLNSKQVKEQT---LRHGDVLRI 111
>gi|392577920|gb|EIW71048.1| hypothetical protein TREMEDRAFT_27547, partial [Tremella
mesenterica DSM 1558]
Length = 313
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGR-----IVRGNDVTIKDDGISSK-HLIIESVS 57
P + + + + I G +I+IGR + G D + S+ H I
Sbjct: 8 PSLHMWPLHDTFGMKMIHLPEGQRIKIGRQTNNKTIPGERNAYFDSKVLSRTHAEIWERG 67
Query: 58 GKWTIQDLDSCNGTFLNSTTLPP----NTPFDLRENDTIKLG 95
GK ++D+ S NGTF+N L P + PF+L+ D ++ G
Sbjct: 68 GKIYMRDVKSSNGTFINGQRLSPEGVESQPFELKNEDIVEFG 109
>gi|425459138|ref|ZP_18838624.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9808]
gi|389823194|emb|CCI28786.1| Genome sequencing data, contig C316 [Microcystis aeruginosa PCC
9808]
Length = 358
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
S IGR + ND+ IKD IS H I++S +G + + DL S NGTF+N + P
Sbjct: 42 SYWTIGR-GKDNDIVIKDHCISRNHAILQSTETGDFYLIDLGSLNGTFVNGRRVA--IPV 98
Query: 85 DLRENDTIKLG 95
+ D I G
Sbjct: 99 TIHNTDQITFG 109
>gi|108802881|ref|YP_642818.1| FHA domain-containing protein [Rubrobacter xylanophilus DSM 9941]
gi|108764124|gb|ABG03006.1| FHA domain containing protein [Rubrobacter xylanophilus DSM 9941]
Length = 155
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 37 NDVTIK-DDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+D+ +K DD +S +H + G ++DL S NGTF+N TP LR+ D +++G
Sbjct: 90 SDIVLKSDDYVSGRHARLTRHGGLLYVEDLGSTNGTFVNGRKAVGATP--LRDGDLVRVG 147
Query: 96 DCT 98
T
Sbjct: 148 STT 150
>gi|444915844|ref|ZP_21235969.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Cystobacter fuscus DSM 2262]
gi|444712838|gb|ELW53751.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Cystobacter fuscus DSM 2262]
Length = 580
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTT 77
E IEF+ ++I IGR+ GND+ + +S H I + GK+ + D+ S NGTF+N
Sbjct: 14 EQIEFEK-NEITIGRL-DGNDIRLAKGNVSKYHSKIIAKDGKFIVVDMKSTNGTFVNGKK 71
Query: 78 LPPNTPFDLRENDTIKLGD 96
+ P ++ D I +GD
Sbjct: 72 IA--GPQVVKPTDQISIGD 88
>gi|256391840|ref|YP_003113404.1| FHA domain-containing protein [Catenulispora acidiphila DSM 44928]
gi|256358066|gb|ACU71563.1| FHA domain containing protein [Catenulispora acidiphila DSM 44928]
Length = 234
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 38 DVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
DV + D G+SS+H +I + TIQDLDS NGTF++
Sbjct: 172 DVRLHDPGVSSRHAVIR-LGRSATIQDLDSTNGTFVD 207
>gi|156742134|ref|YP_001432263.1| FHA domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156233462|gb|ABU58245.1| FHA domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 173
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 42 KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
D G+S +H I+ +G + ++DL S NGTF+N + P ++ D I G
Sbjct: 107 YDAGVSRRHAILSYHNGAYRVEDLGSANGTFVNGRQIKPMCATPVKHGDEIMCG 160
>gi|346311266|ref|ZP_08853274.1| hypothetical protein HMPREF9452_01143 [Collinsella tanakaei YIT
12063]
gi|345901211|gb|EGX71016.1| hypothetical protein HMPREF9452_01143 [Collinsella tanakaei YIT
12063]
Length = 85
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G++ +GR DV ++D +S +H + W+I+DL+S NGT +N+ + +
Sbjct: 10 GARCIVGRERAAADVVLRDPNVSRRHAQLTYTGSDWSIEDLNSTNGTLVNNRRI---SRC 66
Query: 85 DLRENDTIKLGDCT 98
LR+ D + G T
Sbjct: 67 PLRDGDLLTFGLST 80
>gi|148655811|ref|YP_001276016.1| protein kinase [Roseiflexus sp. RS-1]
gi|148567921|gb|ABQ90066.1| protein kinase [Roseiflexus sp. RS-1]
Length = 1167
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84
G + IGR ND+ + D+ +S +H I+ + TI DL S NGTF+ LPP +
Sbjct: 497 GDGLAIGR-AESNDLPLPDESVSEEHAFIDWDGRQVTITDLGSKNGTFVAGIRLPPQERY 555
Query: 85 DLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRA 135
+ +++G +++I +Q SV P VPG +V A
Sbjct: 556 PWQGGAPVRIG---VYWLRLIPPLAQATSVVAPA-----VYGVPGPEAVAA 598
>gi|41409563|ref|NP_962399.1| hypothetical protein MAP3465 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398394|gb|AAS06015.1| hypothetical protein MAP_3465 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 873
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
F G + +GR +R D+ I IS HL++ GKW D S NGTF+N +P
Sbjct: 22 FAAGHDVVVGRDLRA-DMRITHPLISRAHLLLRYDQGKWLAIDNGSLNGTFVNGRRVP 78
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,337,405,466
Number of Sequences: 23463169
Number of extensions: 220862066
Number of successful extensions: 592453
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 2817
Number of HSP's that attempted gapping in prelim test: 589223
Number of HSP's gapped (non-prelim): 5431
length of query: 349
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 206
effective length of database: 9,003,962,200
effective search space: 1854816213200
effective search space used: 1854816213200
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 77 (34.3 bits)