BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037445
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23305|Y4449_ARATH FHA domain-containing protein At4g14490 OS=Arabidopsis thaliana
GN=At4g14490 PE=1 SV=1
Length = 386
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Query: 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKW 60
M P ++L+ V+GPR G+ +++KPGS IR+GRIVRGN++ IKD GIS+KHL IES SG W
Sbjct: 1 MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDSGNW 60
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDESVAKPKRN 120
IQDL S NGT LNS L P T +L + D IKLG+ T+I V + D Q++ K RN
Sbjct: 61 VIQDLGSSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVIDDFQEK---KLTRN 117
Query: 121 PRRQAN 126
RRQAN
Sbjct: 118 NRRQAN 123
>sp|Q4KLN8|RNF8_RAT E3 ubiquitin-protein ligase RNF8 OS=Rattus norvegicus GN=Rnf8 PE=2
SV=1
Length = 487
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + GS++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 28 EWLQLEAGSEVTIGR---GFSVTYQLISKVCPLMISRNHCVLKQNPEGQWTIMDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 85 VWLNRERLAPLQGYCIRKGDHIQLG 109
>sp|Q8VC56|RNF8_MOUSE E3 ubiquitin-protein ligase RNF8 OS=Mus musculus GN=Rnf8 PE=1 SV=1
Length = 488
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E ++ + G+++ IGR G VT + IS H ++ ++ G+WTI D S NG
Sbjct: 28 EWLQLEAGTEVTIGR---GLSVTYQLISKVCPLMISRSHCVLKQNPEGQWTIMDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + +R+ D I+LG
Sbjct: 85 VWLNRERLAPLQGYCIRKGDHIQLG 109
>sp|Q7ZX20|RNF8A_XENLA E3 ubiquitin-protein ligase RNF8-A OS=Xenopus laevis GN=rnf8-a PE=2
SV=1
Length = 540
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGR---IVRGNDVTIKDDGISSKHLII-ESVS 57
E PGM + R R+ E + G ++ +GR + T+ IS H + ++
Sbjct: 4 EGPGMCWCLRRCGRNTEDLLLPDGEEVTLGRGLGVTYQLKPTLCPLMISRTHCLFKQNTG 63
Query: 58 GKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
G+WT+ D S NG + N L P+ + L E I+LG
Sbjct: 64 GEWTVTDNKSLNGVWRNKERLEPHKAYTLSEGALIQLG 101
>sp|Q803C1|RNF8_DANRE E3 ubiquitin-protein ligase RNF8 OS=Danio rerio GN=rnf8 PE=2 SV=1
Length = 485
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 46 ISSKHLIIESVSGK-WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H + + G+ WT+ D S NG ++N +PP+TP L ++D+++LG
Sbjct: 64 ISRIHCVFKLNEGRQWTVTDNKSLNGVWVNGKRIPPSTPCILHQSDSVRLG 114
>sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1
Length = 267
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 28 IRIGRI---VRGNDVT---IKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP- 80
I IGR G DV+ + +S +H I + W IQD+ S +GTFLN L P
Sbjct: 60 IYIGRYTERYNGGDVSAIVFRSKVVSRRHAQIFYENNTWYIQDMGSSSGTFLNHVRLSPP 119
Query: 81 ---NTPFDLRENDTIKLG 95
+ P+ + ND ++LG
Sbjct: 120 SKTSKPYPISNNDILQLG 137
>sp|P46014|P2C70_ARATH Protein phosphatase 2C 70 OS=Arabidopsis thaliana GN=KAPP PE=1 SV=2
Length = 581
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPP----- 80
+++GR V +D+ +KD +S KH + S KW + D+ S NGT +NS ++
Sbjct: 208 VKLGR-VSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGS 266
Query: 81 ---NTPFDLRENDTIKLGDCTTISVQM 104
P +L +D I LG T + V++
Sbjct: 267 RKWGNPVELASDDIITLGTTTKVYVRI 293
>sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1
PE=2 SV=1
Length = 389
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------------IQDLDSCNGTFLNST 76
+GR R D+ I S +H + + ++T I DL S NGTFLN+
Sbjct: 274 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNK 333
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
+ P ++L+E D +K G + V + +S D S
Sbjct: 334 RIEPQRYYELKEKDVLKFGFSSREYV--LLHESSDTS 368
>sp|Q2HJ46|RNF8_BOVIN E3 ubiquitin-protein ligase RNF8 OS=Bos taurus GN=RNF8 PE=2 SV=1
Length = 487
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 18 ETIEFKPGSKIRIGRIVRGNDVTIKDDG------ISSKHLII-ESVSGKWTIQDLDSCNG 70
E + + G+++ +GR G VT + IS H I+ ++ G+WTI+D S NG
Sbjct: 28 EWLLLEDGNEVTVGR---GFGVTYQLVSKICPLMISRNHCILKQNAEGQWTIKDNKSLNG 84
Query: 71 TFLNSTTLPPNTPFDLRENDTIKLG 95
+LN L P + + + D I+LG
Sbjct: 85 VWLNRERLEPLKVYSIHKGDHIQLG 109
>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1
SV=1
Length = 383
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 26 SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------------IQDLDSCNGTF 72
S +GR R D+ I S +H + + ++T I DL S NGTF
Sbjct: 266 SAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTF 325
Query: 73 LNSTTLPPNTPFDLRENDTIKLG 95
LN+ + P ++L+E D +K G
Sbjct: 326 LNNKRIEPQRYYELKEKDVLKFG 348
>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1
SV=1
Length = 396
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIESVSGKWT-------------IQDLDSCNGTFLNST 76
+GR R D+ I S +H + + ++T I DL S NGTFLN+
Sbjct: 283 LGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNK 342
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQMITMDSQDES 113
+ P ++L+E D +K G + V + +S D S
Sbjct: 343 RIEPQRYYELKEKDVLKFGFSSREYV--LLHESSDTS 377
>sp|Q5R4I2|RNF8_PONAB E3 ubiquitin-protein ligase RNF8 OS=Pongo abelii GN=RNF8 PE=2 SV=1
Length = 486
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLSVYSIHQGDYIQLG 109
>sp|P71590|FHAA_MYCTU FHA domain-containing protein FhaA OS=Mycobacterium tuberculosis
GN=fhaA PE=1 SV=1
Length = 527
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 16 SGETIEFKPGSKIRIGRIVRGNDVTIK--DDGISSKHLIIESVSGKWTIQDLDSCNGTFL 73
SG T + + GS I I RG D + D G+S +HL I + DL+S NGT +
Sbjct: 444 SGRTYQLREGSNI----IGRGQDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTV 499
Query: 74 NSTTLPPNTPFDLRENDTIKLGDCTTI 100
N+ P + L + D I+LG I
Sbjct: 500 NNA---PVQEWQLADGDVIRLGHSEII 523
>sp|O76064|RNF8_HUMAN E3 ubiquitin-protein ligase RNF8 OS=Homo sapiens GN=RNF8 PE=1 SV=1
Length = 485
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 46 ISSKHLII-ESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
IS H ++ ++ G+WTI D S NG +LN L P + + + D I+LG
Sbjct: 59 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLG 109
>sp|P34648|YOT2_CAEEL Uncharacterized protein ZK632.2 OS=Caenorhabditis elegans
GN=ZK632.2 PE=4 SV=1
Length = 710
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 28 IRIGRIVRGNDVTIKDDGISSKHLIIE------SVSGK-WTIQDLDSCNGTFLNSTTLPP 80
+ IGRI G D+ ++ IS H I++ S +GK W I +L S +G+ +N LPP
Sbjct: 108 VVIGRIKPGCDLLMEHPSISRYHCILQYGNDKMSKTGKGWHIFELGSTHGSRMNKKRLPP 167
Query: 81 NTPFDLRENDTIKLGDCTTI 100
R + G+ T I
Sbjct: 168 KQYIRTRVGFIFQFGESTRI 187
>sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1
Length = 796
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 19 TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES-VSGK----------WTIQDLDS 67
T K S GR+ G DV ++ +S H +++ SG + + DL S
Sbjct: 180 TRSLKGTSYCLFGRL-SGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYDLGS 238
Query: 68 CNGTFLNSTTLPPNTPFDLRENDTIKLGDCTTISV 102
+GTFLN T +PP T + ++ G T + +
Sbjct: 239 THGTFLNKTRIPPRTYCRVHVGHVVRFGGSTRLFI 273
>sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL
PE=1 SV=1
Length = 314
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 30 IGRIVRGNDVTIKDDGISSKHLIIES----------VSGKW---TIQDLDSCNGTFLNST 76
GR R D+ S +H +I+ + GK I DL S N T++N +
Sbjct: 221 FGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINES 280
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISVQM 104
+ P ++L E DTIK G+ + V +
Sbjct: 281 PIEPQRYYELFEKDTIKFGNSSREYVLL 308
>sp|A6ZRW7|DMA2_YEAS7 E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DMA2 PE=3 SV=1
Length = 522
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 24 PGSKIRIGRIV------------RGNDVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNG 70
PGS++ IGR + + V K +S H + S G W I+D+ S +G
Sbjct: 291 PGSQLVIGRYTERVRDAISKIPEQYHPVVFKSKVVSRTHGCFKVDSQGNWYIKDVKSSSG 350
Query: 71 TFLNSTTLPPNTPFD----LRENDTIKLG 95
TFLN L P + LR+ D ++LG
Sbjct: 351 TFLNHQRLSPASSLSKDTPLRDGDILQLG 379
>sp|P53924|DMA2_YEAST E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1
Length = 522
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 17/89 (19%)
Query: 24 PGSKIRIGRIV------------RGNDVTIKDDGISSKHLIIESVS-GKWTIQDLDSCNG 70
PGS++ IGR + + V K +S H + S G W I+D+ S +G
Sbjct: 291 PGSQLVIGRYTERVRDAISKIPEQYHPVVFKSKVVSRTHGCFKVDSQGNWYIKDVKSSSG 350
Query: 71 TFLNSTTLPPNTPFD----LRENDTIKLG 95
TFLN L P + LR+ D ++LG
Sbjct: 351 TFLNHQRLSPASSLSKDTPLRDGDILQLG 379
>sp|O65934|ABC1_MYCTU ABC transporter ATP-binding/permease protein Rv1747
OS=Mycobacterium tuberculosis GN=Rv1747 PE=1 SV=1
Length = 865
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 22 FKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLP 79
F G + +GR +R DV + IS HL++ G+W D S NG +LN+ +P
Sbjct: 23 FAAGHDVVVGRDLRA-DVRVAHPLISRAHLLLRFDQGRWVAIDNGSLNGLYLNNRRVP 79
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 21 EFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80
E PG+ +RIGR ND+ I + S H + G I+D S NGTF+N +
Sbjct: 224 ELPPGA-VRIGR-ANDNDIVIPEVLASRHHATLVPTPGGTEIRDNRSINGTFVNGARVDA 281
Query: 81 NTPFDLRENDTIKLGDCTTI 100
L + D + +G+ +
Sbjct: 282 AL---LHDGDVVTIGNIDLV 298
>sp|Q498L0|C170B_XENLA Centrosomal protein of 170 kDa protein B OS=Xenopus laevis
GN=cep170b PE=2 SV=1
Length = 1610
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK--WTIQDLDSCNGTFLNSTTLPPN 81
P I +GR ++ ++ + +H +I S K ++DL S NGTF+N +P
Sbjct: 19 PREMIFVGR--EDCELMLRSRSVDKQHAVINYDSDKDEHRVKDLGSLNGTFINDVRIPDQ 76
Query: 82 TPFDLRENDTIKLG-DCTTISVQMI 105
L+ ND I+ G D T ++ I
Sbjct: 77 KYITLKLNDNIRFGYDINTYVLEQI 101
>sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus
GN=Ppp1r8 PE=1 SV=1
Length = 351
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKW 60
PPG+ L +V+G + E + GR D TI S H L+ +
Sbjct: 24 PPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRV 83
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ DL+S +GTFL L P+ P + + T+ G T
Sbjct: 84 FLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGAST 121
>sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8
PE=1 SV=1
Length = 351
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKW 60
PPG+ L +V+G + E + GR D TI S H L+ +
Sbjct: 24 PPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRV 83
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ DL+S +GTFL L P+ P + + T+ G T
Sbjct: 84 FLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGAST 121
>sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens
GN=PPP1R8 PE=1 SV=2
Length = 351
Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKH--LIIESVSGKW 60
PPG+ L +V+G + E + GR D TI S H L+ +
Sbjct: 24 PPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHKHLKRV 83
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
+ DL+S +GTFL L P+ P + + T+ G T
Sbjct: 84 FLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGAST 121
>sp|Q6NRG0|RNF8B_XENLA E3 ubiquitin-protein ligase RNF8-B OS=Xenopus laevis GN=rnf8-b PE=2
SV=1
Length = 532
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 5 GMKLIMVRGPRSGETIEFKPGSKIRIGR---IVRGNDVTIKDDGISSKHLII-ESVSGKW 60
GM + R ++ E + G ++ +GR + T+ IS H + ++ +W
Sbjct: 7 GMCWCLRRCGKNQEVLLLPDGEEVTMGRGLGVTYQLKPTLCPLMISRTHCLFKQNARDEW 66
Query: 61 TIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG----DCTTISVQMITMDSQDESVAK 116
T+ D S NG + N L P+ + L E I+LG + + + I + + V+
Sbjct: 67 TVTDNKSLNGVWRNKERLEPHKAYTLSEGTLIQLGVPPPNMESAEFEYILVREHLDKVSG 126
Query: 117 PKRNPRRQANVPGTSSVRATSGRKKAEAEPVETLGLEG---GQIEDQSRINKKGRGRNKN 173
P +PG + +AT ++K +E + G EG I R+++ G K+
Sbjct: 127 SLIRP-----LPGKT--KATRTKRKFPSEDADASGNEGPSNFSIPKFCRVSRDGEDSAKS 179
Query: 174 L 174
L
Sbjct: 180 L 180
>sp|Q80U49|C170B_MOUSE Centrosomal protein of 170 kDa protein B OS=Mus musculus GN=Cep170b
PE=1 SV=2
Length = 1574
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 25 GSKIRIGR--IVRGND---VTIKDDGISSKHLIIESVSGK---WTIQDLDSCNGTFLNST 76
G++ R+ R I G D + ++ + +H +I + W ++DL S NGTF+N
Sbjct: 13 GTRHRLPRELIFVGRDECELMLQSRSVDKQHAVINYDQDRDEHW-VKDLGSLNGTFVNDV 71
Query: 77 TLPPNTPFDLRENDTIKLGDCTTISV 102
+P L+ ND I+ G + + V
Sbjct: 72 RIPDQKYITLKLNDVIRFGYDSNMYV 97
>sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP
PE=1 SV=1
Length = 828
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVR-----GNDVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPP 80
I+IGR V N+ T +S H ++ + +GK+ +QD S NGTF+NS L
Sbjct: 28 IKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSR 87
Query: 81 NT----PFDLRENDTIKLG 95
+ P ++ D I+ G
Sbjct: 88 GSEESPPCEILSGDIIQFG 106
>sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus
GN=SLMAP PE=1 SV=2
Length = 771
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVR-----GNDVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPP 80
I+IGR V N+ T +S H ++ + +GK+ +QD S NGTF+NS L
Sbjct: 28 IKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSR 87
Query: 81 NT----PFDLRENDTIKLG 95
+ P ++ D I+ G
Sbjct: 88 GSEESPPCEILSGDIIQFG 106
>sp|A0JM08|C170B_XENTR Centrosomal protein of 170 kDa protein B OS=Xenopus tropicalis
GN=cep170b PE=2 SV=1
Length = 1628
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 24 PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGK--WTIQDLDSCNGTFLNSTTLPPN 81
P I +GR ++ ++ + +H +I S K ++DL S NGTF+N +P
Sbjct: 19 PREMIFVGR--EDCELMLQSRSVDKQHAVINYDSDKDEHRVKDLGSLNGTFVNDVRIPDQ 76
Query: 82 TPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKRNPRRQ---------------- 124
L+ +D I+ G D T ++ I +E++ K Q
Sbjct: 77 KYITLKLSDNIRFGYDINTYVLEQIQHQVPEEALKHEKYTSHLQMCLKTAAAGREDQFKE 136
Query: 125 --ANVPGTSSVRATSGRKKAEAEPVETLGLEG-----GQIEDQSRINKKGRGRNKNLQEM 177
A+V + + + +K P L G G+ +D ++++K+GR ++++ E
Sbjct: 137 HGAHVDSAQAKQDKADKKATSDIPAYRTPLYGQPSWWGE-DDDNKLDKEGRRQDEHYSER 195
Query: 178 P 178
P
Sbjct: 196 P 196
>sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1
Length = 1584
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 25 GSKIRIGR--IVRGND---VTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTT 77
G++ R+ R I G D + ++ + +H +I ++ + + ++DL S NGTF+N
Sbjct: 13 GTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDASTDEHLVKDLGSLNGTFVNDVR 72
Query: 78 LPPNTPFDLRENDTIKLGDCTTI 100
+P T L+ D ++ G T +
Sbjct: 73 IPEQTYITLKLEDKLRFGYDTNL 95
>sp|Q9Y4F5|C170B_HUMAN Centrosomal protein of 170 kDa protein B OS=Homo sapiens GN=CEP170B
PE=1 SV=4
Length = 1589
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 38 DVTIKDDGISSKHLIIESVSGK---WTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94
++ ++ + +H +I + W ++DL S NGTF+N +P L+ ND I+
Sbjct: 31 ELMLQSRSVDKQHAVINYDQDRDEHW-VKDLGSLNGTFVNDMRIPDQKYVTLKLNDVIRF 89
Query: 95 G-DCTTISVQMITMDSQDESVAKPKRNPRRQANVPGTSSVRATSGRKKAEAEPVETLGLE 153
G D ++ + +E++ K + Q +V G + K++EA P T E
Sbjct: 90 GYDSNMYVLERVQHRVPEEALKHEKYTSQLQVSVKGLAP-------KRSEALPEHTPYCE 142
Query: 154 G 154
Sbjct: 143 A 143
>sp|Q6A065|CE170_MOUSE Centrosomal protein of 170 kDa OS=Mus musculus GN=Cep170 PE=1 SV=2
Length = 1588
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 25 GSKIRIGR--IVRGND---VTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTT 77
G++ R+ R I G D + ++ + +H +I ++ + ++DL S NGTF+N
Sbjct: 13 GTRHRLPREMIFVGRDDCELMLQSRSVDKQHAVINYDASMDEHLVKDLGSLNGTFVNDVR 72
Query: 78 LPPNTPFDLRENDTIKLG-DCTTISVQMITMDSQDESVAKPKRNPRRQ-------ANVPG 129
+P T L+ D ++ G D +V M +E++ K + Q + +P
Sbjct: 73 IPEQTYITLKLEDKLRFGYDTNLFTVVRGEMRVPEEALKHEKFTIQLQLSQKSSESELPK 132
Query: 130 TSSVRATSGRKKAEAE 145
++S + T + +A AE
Sbjct: 133 SASAKGTDSKVEAAAE 148
>sp|Q07930|PML1_YEAST Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PML1 PE=1 SV=1
Length = 204
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 38 DVTIKDDGISSKHLIIE--SVSG--KWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIK 93
D+ I ++ S +H +I+ +V G K + DLDS NGT LN+ +P +LR D +
Sbjct: 128 DIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPGARYIELRSGDVLT 187
Query: 94 L 94
L
Sbjct: 188 L 188
>sp|A3M3D6|SYK_ACIBT Lysine--tRNA ligase OS=Acinetobacter baumannii (strain ATCC 17978 /
NCDC KC 755) GN=lysS PE=3 SV=2
Length = 509
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 34/161 (21%)
Query: 207 TKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVD 266
T K + DLQE D K +IES E++ ++V G + + +F ++ + + Q+ VD
Sbjct: 45 TFKREHYAADLQEQFKDQSKEQIESAEHVY-VKVAGRVMLNRGSFMVIQDMTGRIQLYVD 103
Query: 267 --GKEKTNVTLIAGARVTRSRMNALNLGFDCGETAATESKITRKGRG-----------RK 313
G K + I G D G+ A E I R G+G
Sbjct: 104 RKGLPKDTLETIKG--------------LDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT 149
Query: 314 KKLQEMPPQSSSEVETEGKER------LVPEEVSKTCEVQA 348
K L+ +P + +TE K R +V EE KT E++A
Sbjct: 150 KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus
GN=Slmap PE=2 SV=1
Length = 858
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 28 IRIGRIVR-----GNDVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPP 80
I+IGR V N+ T +S H ++ + + K+ +QD S NGTF+NS L
Sbjct: 28 IKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTSKFYLQDTKSSNGTFINSQRLSR 87
Query: 81 NT----PFDLRENDTIKLG-DCTTISVQMIT 106
+ P ++ D I+ G D T + +++T
Sbjct: 88 GSEESPPCEILSGDIIQFGVDVTENTRKVVT 118
>sp|B0V9L5|SYK_ACIBY Lysine--tRNA ligase OS=Acinetobacter baumannii (strain AYE) GN=lysS
PE=3 SV=1
Length = 509
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 34/161 (21%)
Query: 207 TKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVD 266
T K + DLQE D K +IES E++ ++V G + + +F ++ + + Q+ VD
Sbjct: 45 TFKREHYAADLQEQFKDQSKEQIESAEHVY-VKVAGRVMLNRGSFMVIQDMTGRIQLYVD 103
Query: 267 --GKEKTNVTLIAGARVTRSRMNALNLGFDCGETAATESKITRKGRG-----------RK 313
G K + I G D G+ A E I R G+G
Sbjct: 104 RKGLPKDTLETIKG--------------LDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT 149
Query: 314 KKLQEMPPQSSSEVETEGKER------LVPEEVSKTCEVQA 348
K L+ +P + +TE K R +V EE KT E++A
Sbjct: 150 KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
>sp|B0VSE0|SYK_ACIBS Lysine--tRNA ligase OS=Acinetobacter baumannii (strain SDF) GN=lysS
PE=3 SV=1
Length = 509
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 34/161 (21%)
Query: 207 TKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVD 266
T K + DLQE D K +IES E++ ++V G + + +F ++ + + Q+ VD
Sbjct: 45 TFKREHYAADLQEQFKDQSKEQIESAEHVY-VKVAGRVMLNRGSFMVIQDMTGRIQLYVD 103
Query: 267 --GKEKTNVTLIAGARVTRSRMNALNLGFDCGETAATESKITRKGRG-----------RK 313
G K + I G D G+ A E I R G+G
Sbjct: 104 RKGLPKDTLETIKG--------------LDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT 149
Query: 314 KKLQEMPPQSSSEVETEGKER------LVPEEVSKTCEVQA 348
K L+ +P + +TE K R +V EE KT E++A
Sbjct: 150 KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
>sp|B7GXW0|SYK_ACIB3 Lysine--tRNA ligase OS=Acinetobacter baumannii (strain AB307-0294)
GN=lysS PE=3 SV=1
Length = 509
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 34/161 (21%)
Query: 207 TKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVD 266
T K + DLQE D K +IES E++ ++V G + + +F ++ + + Q+ VD
Sbjct: 45 TFKREHYAADLQEQFKDQSKEQIESAEHVY-VKVAGRVMLNRGSFMVIQDMTGRIQLYVD 103
Query: 267 --GKEKTNVTLIAGARVTRSRMNALNLGFDCGETAATESKITRKGRG-----------RK 313
G K + I G D G+ A E I R G+G
Sbjct: 104 RKGLPKDTLETIKG--------------LDLGDIIAAEGYIGRSGKGDLYVHLEGFELLT 149
Query: 314 KKLQEMPPQSSSEVETEGKER------LVPEEVSKTCEVQA 348
K L+ +P + +TE K R +V EE KT E++A
Sbjct: 150 KSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRA 190
>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap
PE=1 SV=2
Length = 845
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 28 IRIGRIVR-----GNDVTIKDDGISSKHLII--ESVSGKWTIQDLDSCNGTFLNSTTLPP 80
I+IGR V N+ T +S H ++ + + K+ +QD S NGTF+NS L
Sbjct: 28 IKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTSKFYLQDTKSSNGTFINSQRLSR 87
Query: 81 NT----PFDLRENDTIKLG 95
+ P ++ D I+ G
Sbjct: 88 GSEESPPCEILSGDIIQFG 106
>sp|A0QNG6|FHAB_MYCS2 FHA domain-containing protein FhaB OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=fhaB PE=1 SV=1
Length = 155
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 25 GSKIRIGR----IVRGNDVTI--KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN 74
G++I +G I R +D T+ DD S++H + +W ++DL S NGT+L+
Sbjct: 73 GTRITLGNQPVLIGRADDSTLVLTDDYASTRHARLSPRGSEWYVEDLGSTNGTYLD 128
>sp|P44596|HAP1_HAEIN Adhesion and penetration protein autotransporter OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=hap PE=3 SV=2
Length = 1409
Score = 33.9 bits (76), Expect = 1.9, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 133 VRATSGRKKAEAEPVETLGLEGGQIEDQSRINKKGRGRNKNLQEMPPQSVEVQVESKENL 192
VRA + EA+ VE Q ++ + K R R L + P S + + + E
Sbjct: 1005 VRAEQAEQTLEAKQVE-------QTAEKQKSKAKARSRRAVLSDTP--SAQSLLNALEAK 1055
Query: 193 ELEEGGEIESESKITKKGRGR---SKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKE 249
++E+ E ++ TKKGR + S + P D ++K+ + LEV+ Q K+
Sbjct: 1056 QVEQTTETQTSKPKTKKGRSKRALSAAFSDTPFDLSQLKVFEVK----LEVINAQPQVKK 1111
Query: 250 NFRPGKETSKK 260
+ +E K+
Sbjct: 1112 EPQDQEEQGKQ 1122
>sp|P71589|FHAB_MYCTU FHA domain-containing protein FhaB OS=Mycobacterium tuberculosis
GN=fhaB PE=1 SV=1
Length = 155
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 35 RGNDVTI--KDDGISSKHLIIESVSGKWTIQDLDSCNGTFLN------STTLPPNTP 83
R +D T+ DD S++H + +W ++DL S NGT+L+ + +P TP
Sbjct: 87 RADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTP 143
>sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133
OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1
Length = 1505
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98
I DL+S NGTFL + P F+LR D I G T
Sbjct: 1447 IIDLESTNGTFLKGEKIEPAKYFELRPKDKITFGTST 1483
>sp|O81360|ABA2_PRUAR Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1
Length = 661
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 34 VRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNS-----TTLPPNTPFDLRE 88
V G + I +S H I G + + DL S +GT++ +PPN P R
Sbjct: 568 VSGISIAIPKPQVSEMHARISYKDGAFYLTDLRSEHGTWIADIEGKRYRVPPNFPARFRP 627
Query: 89 NDTIKLGDCTTISVQMITMDSQDESVAK 116
+D I++G ++ ++ M S SV K
Sbjct: 628 SDAIEIGS-QKVAFRVKVMKSSPGSVEK 654
>sp|Q03944|VPS64_YEAST Vacuolar protein sorting-associated protein 64 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1
SV=1
Length = 604
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 46 ISSKH--LIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLG 95
+S H L + SGK I+DL S NGTF+N + N +L+ DT+ LG
Sbjct: 223 LSRNHACLSCDPTSGKIYIRDLKSSNGTFVNGVKIRQND-VELKVGDTVDLG 273
>sp|B1ZIK6|GATB_METPB Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
13946 / BJ001) GN=gatB PE=3 SV=1
Length = 490
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 170 RNKNLQEMPPQSVEVQVESKENLELEEGGEIESESKITKKGRGRSKDLQEMPLDGGKVKI 229
+N N Q++E + + + LE+GG+I+ E+++ G+G ++ ++ + +
Sbjct: 229 KNVNSIRFIGQAIETEARRQIAI-LEDGGKIDQETRLFDPGKGETRSMRSKE-EAHDYRY 286
Query: 230 ESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVD-GKEKTNVTLIAGARVTRSRMNA 288
+ +L PLE VDG + P +KK + D G + ++ R + A
Sbjct: 287 FPDPDLLPLEFDQAYVDGLASGLPELPDAKKARFIKDFGLSAYDAGVLVAERASADYFEA 346
Query: 289 LNLGFDCGETAA 300
+ G D G+ AA
Sbjct: 347 VARGRD-GKAAA 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,112,550
Number of Sequences: 539616
Number of extensions: 5522671
Number of successful extensions: 15437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 15264
Number of HSP's gapped (non-prelim): 405
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)