Query 037445
Match_columns 349
No_of_seqs 214 out of 1571
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 21:13:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h87_A Kanadaptin; FHA domain 99.9 7.4E-24 2.5E-28 180.8 13.1 97 5-102 20-127 (130)
2 1uht_A Expressed protein; FHA 99.9 1.1E-23 3.8E-28 174.9 11.2 106 1-106 8-113 (118)
3 3gqs_A Adenylate cyclase-like 99.9 2.5E-22 8.5E-27 164.2 12.1 98 2-102 1-100 (106)
4 2xt9_B Putative signal transdu 99.9 4E-21 1.4E-25 159.3 14.7 94 2-100 8-101 (115)
5 1mzk_A Kinase associated prote 99.9 4.2E-21 1.4E-25 164.4 14.4 104 3-107 5-122 (139)
6 3va4_A Mediator of DNA damage 99.8 4E-21 1.4E-25 164.4 11.4 98 3-102 22-124 (132)
7 2kb3_A Oxoglutarate dehydrogen 99.8 1.4E-20 4.7E-25 163.1 13.6 94 2-100 43-136 (143)
8 2jpe_A Nuclear inhibitor of pr 99.8 6.7E-22 2.3E-26 169.3 4.1 99 3-102 32-133 (140)
9 3po8_A RV0020C protein, putati 99.8 1.2E-20 4.2E-25 152.4 10.9 91 2-99 2-92 (100)
10 1r21_A Antigen KI-67; beta san 99.8 1.6E-20 5.4E-25 158.1 10.9 94 3-100 10-104 (128)
11 3els_A PRE-mRNA leakage protei 99.8 3E-20 1E-24 163.5 12.2 95 4-98 30-146 (158)
12 2kfu_A RV1827 PThr 22; FHA dom 99.8 4.8E-20 1.7E-24 163.1 13.0 91 3-98 53-143 (162)
13 3hx1_A SLR1951 protein; P74513 99.8 1.2E-19 4.2E-24 154.5 12.8 101 3-108 8-118 (131)
14 2jqj_A DNA damage response pro 99.8 2.2E-19 7.4E-24 155.7 14.0 91 3-97 16-114 (151)
15 1lgp_A Cell cycle checkpoint p 99.8 7.5E-20 2.6E-24 151.2 8.8 93 2-97 1-96 (116)
16 3elv_A PRE-mRNA leakage protei 99.8 2.1E-19 7.3E-24 164.8 12.4 94 5-98 78-193 (205)
17 2pie_A E3 ubiquitin-protein li 99.8 4.9E-19 1.7E-23 151.3 11.4 89 7-97 10-103 (138)
18 1g3g_A Protien kinase SPK1; FH 99.8 3.9E-19 1.3E-23 156.5 10.5 93 3-97 31-135 (164)
19 1gxc_A CHK2, CDS1, serine/thre 99.8 2.2E-18 7.6E-23 149.2 14.0 97 4-105 29-139 (149)
20 3oun_A Putative uncharacterize 99.8 1.1E-18 3.6E-23 154.2 10.7 88 5-99 67-154 (157)
21 1dmz_A Protein (protein kinase 99.8 1.2E-18 4.1E-23 152.7 9.8 97 4-102 4-121 (158)
22 2csw_A Ubiquitin ligase protei 99.7 3.8E-18 1.3E-22 147.1 10.4 89 6-97 18-111 (145)
23 1g6g_A Protein kinase RAD53; b 99.7 1.3E-17 4.4E-22 140.5 12.8 93 4-98 4-108 (127)
24 1wln_A Afadin; beta sandwich, 99.7 7.4E-18 2.5E-22 140.7 9.8 90 5-97 11-106 (120)
25 1qu5_A Protein kinase SPK1; FH 99.7 3.2E-18 1.1E-22 153.7 5.7 93 6-100 30-143 (182)
26 2ff4_A Probable regulatory pro 99.7 8.3E-17 2.8E-21 156.9 11.0 87 8-99 290-376 (388)
27 4ejq_A Kinesin-like protein KI 99.6 6.2E-15 2.1E-19 128.7 12.9 90 6-98 39-137 (154)
28 3fm8_A Kinesin-like protein KI 99.6 5.5E-15 1.9E-19 125.6 10.4 88 5-98 26-117 (124)
29 4a0e_A YSCD, type III secretio 99.6 1.7E-14 5.7E-19 123.2 11.9 96 5-109 4-100 (123)
30 3huf_A DNA repair and telomere 99.5 2E-14 6.7E-19 139.5 10.6 93 5-99 1-107 (325)
31 3uv0_A Mutator 2, isoform B; F 99.3 2E-12 6.8E-17 107.0 7.8 73 19-97 14-93 (102)
32 3i6u_A CDS1, serine/threonine- 99.3 1.1E-11 3.9E-16 120.0 9.7 96 4-104 9-118 (419)
33 3kt9_A Aprataxin; FHA domain, 99.2 1.3E-10 4.6E-15 96.0 11.8 91 5-101 4-96 (102)
34 4egx_A Kinesin-like protein KI 99.0 6.4E-09 2.2E-13 93.5 12.6 94 6-105 69-172 (184)
35 1wv3_A Similar to DNA segregat 98.9 2.1E-09 7.3E-14 99.7 6.1 68 25-99 91-164 (238)
36 2brf_A Bifunctional polynucleo 98.8 1.1E-08 3.8E-13 85.7 9.1 88 3-96 7-97 (110)
37 1yj5_C 5' polynucleotide kinas 98.8 2.9E-08 9.9E-13 86.6 11.2 88 3-96 7-97 (143)
38 1ujx_A Polynucleotide kinase 3 98.6 2.2E-08 7.4E-13 85.0 5.1 90 4-99 15-109 (119)
39 1wv3_A Similar to DNA segregat 96.3 0.022 7.7E-07 52.5 10.5 51 7-62 3-54 (238)
40 3gqs_A Adenylate cyclase-like 91.3 0.68 2.3E-05 36.8 7.5 65 205-280 37-102 (106)
41 3po8_A RV0020C protein, putati 89.7 0.89 3.1E-05 35.7 6.8 63 204-278 33-95 (100)
42 1r21_A Antigen KI-67; beta san 88.9 0.62 2.1E-05 38.3 5.5 62 206-278 45-106 (128)
43 2xt9_B Putative signal transdu 88.1 1.2 4.2E-05 35.9 6.7 61 206-278 43-103 (115)
44 1wln_A Afadin; beta sandwich, 86.5 0.88 3E-05 37.1 5.0 57 205-267 49-105 (120)
45 2kb3_A Oxoglutarate dehydrogen 85.5 1.2 4E-05 37.9 5.5 56 211-278 83-138 (143)
46 1uht_A Expressed protein; FHA 84.2 1.3 4.6E-05 35.7 5.0 52 210-267 50-103 (118)
47 2kfu_A RV1827 PThr 22; FHA dom 83.5 1.8 6E-05 37.8 5.8 63 205-279 86-148 (162)
48 3oun_A Putative uncharacterize 82.4 2.8 9.5E-05 36.5 6.6 55 211-277 102-156 (157)
49 3fm8_A Kinesin-like protein KI 81.3 7 0.00024 32.5 8.4 57 204-267 58-115 (124)
50 2ff4_A Probable regulatory pro 78.7 3.4 0.00012 39.8 6.5 64 205-279 317-380 (388)
51 3v4y_B Nuclear inhibitor of pr 77.4 0.16 5.5E-06 38.4 -2.5 48 115-163 10-62 (62)
52 3va4_A Mediator of DNA damage 74.3 5 0.00017 33.5 5.6 60 209-279 60-125 (132)
53 1mzk_A Kinase associated prote 70.3 6.7 0.00023 32.6 5.4 60 208-278 46-117 (139)
54 3uv0_A Mutator 2, isoform B; F 69.8 7.5 0.00026 32.0 5.4 84 184-287 17-100 (102)
55 2jqj_A DNA damage response pro 68.7 7.8 0.00027 32.7 5.5 38 223-267 75-113 (151)
56 1g6g_A Protein kinase RAD53; b 64.2 12 0.00041 30.5 5.7 59 213-278 56-118 (127)
57 4ejq_A Kinesin-like protein KI 62.5 20 0.00068 30.5 7.0 58 204-267 74-135 (154)
58 2jpe_A Nuclear inhibitor of pr 60.8 3.4 0.00012 34.4 1.8 47 215-267 77-127 (140)
59 1lgp_A Cell cycle checkpoint p 58.6 9.4 0.00032 30.4 4.0 57 214-277 45-108 (116)
60 1g3g_A Protien kinase SPK1; FH 57.3 32 0.0011 29.4 7.4 60 213-279 84-147 (164)
61 2pie_A E3 ubiquitin-protein li 55.7 23 0.0008 29.2 6.1 49 213-267 51-102 (138)
62 1qu5_A Protein kinase SPK1; FH 49.7 22 0.00074 31.3 5.2 34 225-265 97-132 (182)
63 3hx1_A SLR1951 protein; P74513 48.5 31 0.001 28.5 5.7 35 226-267 67-106 (131)
64 1dmz_A Protein (protein kinase 45.7 18 0.0006 30.9 3.9 34 225-265 73-108 (158)
65 4egx_A Kinesin-like protein KI 43.5 43 0.0015 29.4 6.1 57 204-267 104-165 (184)
66 2csw_A Ubiquitin ligase protei 43.4 37 0.0013 28.2 5.5 48 214-267 60-110 (145)
67 4h87_A Kanadaptin; FHA domain 42.0 24 0.00082 29.2 4.0 41 221-267 79-121 (130)
68 1p9k_A ORF, hypothetical prote 40.2 8.8 0.0003 28.8 1.0 27 237-269 47-74 (79)
69 3els_A PRE-mRNA leakage protei 37.4 54 0.0018 28.0 5.6 60 214-279 91-157 (158)
70 3mml_A Allophanate hydrolase s 36.8 70 0.0024 30.9 6.9 40 66-105 78-120 (318)
71 1gxc_A CHK2, CDS1, serine/thre 34.9 51 0.0017 27.5 5.0 35 226-267 94-130 (149)
72 4a0e_A YSCD, type III secretio 31.5 1.3E+02 0.0045 25.1 6.9 66 204-282 35-100 (123)
73 2k6p_A Uncharacterized protein 27.2 52 0.0018 25.0 3.4 27 238-270 28-54 (92)
74 2q5w_D Molybdopterin convertin 26.9 47 0.0016 24.1 3.1 23 70-94 48-70 (77)
75 2k6p_A Uncharacterized protein 25.3 47 0.0016 25.2 2.9 26 70-97 27-52 (92)
76 3qrl_A Transcription initiatio 23.0 43 0.0015 28.8 2.4 21 204-224 77-97 (140)
77 3elv_A PRE-mRNA leakage protei 22.5 97 0.0033 28.0 4.8 48 226-279 154-204 (205)
78 2hj1_A Hypothetical protein; s 21.1 47 0.0016 26.6 2.2 28 64-94 55-82 (97)
79 1dm9_A Hypothetical 15.5 KD pr 20.2 69 0.0024 26.6 3.1 25 68-94 33-57 (133)
No 1
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.91 E-value=7.4e-24 Score=180.77 Aligned_cols=97 Identities=27% Similarity=0.419 Sum_probs=88.7
Q ss_pred cEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEE-----------ECCEEEEEeCCCCCceEE
Q 037445 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES-----------VSGKWTIQDLDSCNGTFL 73 (349)
Q Consensus 5 ~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~-----------~~g~~~L~DLgStNGTfV 73 (349)
.++|.|++++.....+.|..+..++|||+ ++|||+|+|+.|||+||.|++ .++.|+|+||+|+|||||
T Consensus 20 ~~~L~v~k~g~~~~~~~L~~~~~~~IGR~-~~~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~Dl~StNGT~v 98 (130)
T 4h87_A 20 PYSLETLKGGTILGTRSLKGTSYCLFGRL-SGCDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYDLGSTHGTFL 98 (130)
T ss_dssp CCEEEEEETTEEEEEEECTTCSEEEEESS-TTSSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEEECSCSSCEEE
T ss_pred CEEEEEEECCeeeeeEEeCCCceEEEcCC-cCCCEEeCCCCcchhcEEEEEecccCccceeccCCcceEeeCCCCCceEE
Confidence 47999999998888999987788999999 899999999999999999976 356799999999999999
Q ss_pred cCeecCCCCcEEecCCCEEEECCcceEEE
Q 037445 74 NSTTLPPNTPFDLRENDTIKLGDCTTISV 102 (349)
Q Consensus 74 NG~rI~~~~~v~L~~GD~I~LG~st~~~v 102 (349)
||++|.++.++.|++||+|+||.+++.|+
T Consensus 99 Ng~ri~~~~~~~L~~GD~I~~G~str~yv 127 (130)
T 4h87_A 99 NKTRIPPRTYCRVHVGHVVRFGGSTRLFI 127 (130)
T ss_dssp TTEECCTTCCEECCTTCEEEETTCSEEEE
T ss_pred CCEECCCCceeECCCCCEEEECCceEEEE
Confidence 99999998999999999999999988776
No 2
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.90 E-value=1.1e-23 Score=174.92 Aligned_cols=106 Identities=56% Similarity=0.997 Sum_probs=98.4
Q ss_pred CCCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCC
Q 037445 1 MEPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPP 80 (349)
Q Consensus 1 M~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~ 80 (349)
|.+|.+.|.++.|+..+..+.|..+..++|||+++.|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||++|.+
T Consensus 8 ~~~p~l~L~v~~g~~~g~~~~l~~~~~~~iGR~~~~~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng~~l~~ 87 (118)
T 1uht_A 8 MVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSNALDP 87 (118)
T ss_dssp CCSCEEEEEESSSTTTTCBCCBCTTCCEEEESSSTTCSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESSSBCCT
T ss_pred CCCCeEEEEEEeCCCCCcEEEECCCCEEEEcCCCCCCCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEECCEECCC
Confidence 56889999999999999999998667899999855899999999999999999999999999999999999999999998
Q ss_pred CCcEEecCCCEEEECCcceEEEEEEe
Q 037445 81 NTPFDLRENDTIKLGDCTTISVQMIT 106 (349)
Q Consensus 81 ~~~v~L~~GD~I~LG~st~~~v~f~~ 106 (349)
+.++.|++||.|+||...+.++.|..
T Consensus 88 ~~~~~L~~gd~i~lG~~~~~~~~~~~ 113 (118)
T 1uht_A 88 ETSVNLGDGDVIKLGEYTSILVNFVS 113 (118)
T ss_dssp TCEEECCTTEEEEETTTEEEEEEEEC
T ss_pred CCeEEcCCCCEEEECCeEEEEEEEec
Confidence 88999999999999999888887764
No 3
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.88 E-value=2.5e-22 Score=164.16 Aligned_cols=98 Identities=23% Similarity=0.337 Sum_probs=87.2
Q ss_pred CCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCC-CCCEEeCCCCCCcccEEEEEE-CCEEEEEeCCCCCceEEcCeecC
Q 037445 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVR-GNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLP 79 (349)
Q Consensus 2 ~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~-~cDIvL~DpsVSR~HA~I~~~-~g~~~L~DLgStNGTfVNG~rI~ 79 (349)
+|..|.|.|+.|+..|..|.|..+..++|||+ + .|||+|+|+.|||.||.|.+. ++.|+|+|++|+|||||||+++.
T Consensus 1 p~~~~~L~v~~G~~~g~~~~l~~~~~~~iGR~-~~~~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~vng~~i~ 79 (106)
T 3gqs_A 1 QPSRFLLKVLAGANIGAEFHLDSGKTYIVGSD-PQVADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIVEGRKIE 79 (106)
T ss_dssp --CEEEEEECC-CCTTCEEEECTTCEEEEESC-TTTCSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEETTEECS
T ss_pred CCceEEEEEEeCCCCcEEEEECCCCEEEEeEC-CCcCCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEECCEECC
Confidence 35678999999999999999997778999999 6 799999999999999999998 68899999999999999999998
Q ss_pred CCCcEEecCCCEEEECCcceEEE
Q 037445 80 PNTPFDLRENDTIKLGDCTTISV 102 (349)
Q Consensus 80 ~~~~v~L~~GD~I~LG~st~~~v 102 (349)
+ ++.|++||.|+||.+.+.|+
T Consensus 80 ~--~~~L~~Gd~i~~G~~~~~~~ 100 (106)
T 3gqs_A 80 H--QSTLSANQVVALGTTLFLLV 100 (106)
T ss_dssp S--EEECCTTCCEEETTEEEEEE
T ss_pred C--CeECCCCCEEEECCEEEEEE
Confidence 5 68999999999999854443
No 4
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.86 E-value=4e-21 Score=159.28 Aligned_cols=94 Identities=22% Similarity=0.425 Sum_probs=87.1
Q ss_pred CCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCC
Q 037445 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81 (349)
Q Consensus 2 ~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~ 81 (349)
++..+.|+|+.|+..+..|.|. ...++|||+ +.|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||+++.
T Consensus 8 p~~~~~L~v~~g~~~g~~~~l~-~~~~~IGR~-~~~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-- 83 (115)
T 2xt9_B 8 PSGSALLVVKRGPNAGSRFLLD-QPTTSAGRH-PDSDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVD-- 83 (115)
T ss_dssp CCSCEEEEEEESTTTTCEEEEC-SSEEEEESS-TTSSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEETTEECS--
T ss_pred CCCcEEEEEEeCCCCCeEEEEC-CCCEEECCC-CCCCEEeCCcccChhheEEEEECCEEEEEECCCCCCeEECCEEcc--
Confidence 4677899999999999999999 468999999 799999999999999999999999999999999999999999998
Q ss_pred CcEEecCCCEEEECCcceE
Q 037445 82 TPFDLRENDTIKLGDCTTI 100 (349)
Q Consensus 82 ~~v~L~~GD~I~LG~st~~ 100 (349)
++.|++||.|+||.+.+.
T Consensus 84 -~~~L~~gd~i~iG~~~l~ 101 (115)
T 2xt9_B 84 -SAVLANGDEVQIGKFRLV 101 (115)
T ss_dssp -EEEECTTCEEEETTEEEE
T ss_pred -eEECCCCCEEEECCEEEE
Confidence 589999999999997433
No 5
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.86 E-value=4.2e-21 Score=164.37 Aligned_cols=104 Identities=30% Similarity=0.519 Sum_probs=93.5
Q ss_pred CCcEEEEEEeCCCCCeEEEecCC----CeEEEcCCCCCCCEEeCCCCCCcccEEEEEECC--EEEEEeCCCCCceEEcCe
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPG----SKIRIGRIVRGNDVTIKDDGISSKHLIIESVSG--KWTIQDLDSCNGTFLNST 76 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g----~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g--~~~L~DLgStNGTfVNG~ 76 (349)
+..+.|.|+.|+..|..|.|..+ ..++|||+ +.|||+|+|+.|||.||.|.+..+ .|+|+|++|+|||||||+
T Consensus 5 ~~~~~L~v~~G~~~g~~~~l~~~~~~~~~~~IGR~-~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~ 83 (139)
T 1mzk_A 5 SSWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRV-SPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSH 83 (139)
T ss_dssp SEEEEEEECSSTTCSCEEEECTTCSTTCSEEEESS-SSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTE
T ss_pred CCeEEEEEEeCCCCCeEEEecCCCCccceEEeeCC-CCCCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCE
Confidence 45689999999999999999854 36999999 799999999999999999999874 799999999999999999
Q ss_pred ecCC--------CCcEEecCCCEEEECCcceEEEEEEeC
Q 037445 77 TLPP--------NTPFDLRENDTIKLGDCTTISVQMITM 107 (349)
Q Consensus 77 rI~~--------~~~v~L~~GD~I~LG~st~~~v~f~~~ 107 (349)
++.+ +.++.|++||+|+||.+.+.|+.+...
T Consensus 84 ~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~~~~~~~~~~ 122 (139)
T 1mzk_A 84 SISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQ 122 (139)
T ss_dssp ESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEEC
T ss_pred ECcCcccccccCCceEECCCCCEEEECCEEEEEEEcCCC
Confidence 9984 678999999999999998888766543
No 6
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.85 E-value=4e-21 Score=164.38 Aligned_cols=98 Identities=26% Similarity=0.305 Sum_probs=88.8
Q ss_pred CCcEEEEEEeCCC-CCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--CCEEEEEeCCCCCceEEcCee--
Q 037445 3 PPGMKLIMVRGPR-SGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTT-- 77 (349)
Q Consensus 3 PP~l~L~Vi~Gp~-~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~r-- 77 (349)
+|..+|+|+.|+. .|+.|.|. ...++|||+ ++|||+|+|+.|||.||.|.+. ++.|+|+|++|+|||||||++
T Consensus 22 ~p~g~L~v~~g~~~~g~~~~L~-~~~~~IGR~-~~~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~~i~ 99 (132)
T 3va4_A 22 EPIGQLRLFSGTHGPERDFPLY-LGKNVVGRS-PDCSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKPPRV 99 (132)
T ss_dssp CCSEEEEECCBTTBSCEEEEEC-SEEEEEESS-TTSSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTTTEE
T ss_pred CCcEEEEEEeCCCCCceEEEEC-CCCEEEccC-CCCCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCEEcc
Confidence 5778999999998 99999999 457899999 7999999999999999999997 578999999999999999998
Q ss_pred cCCCCcEEecCCCEEEECCcceEEE
Q 037445 78 LPPNTPFDLRENDTIKLGDCTTISV 102 (349)
Q Consensus 78 I~~~~~v~L~~GD~I~LG~st~~~v 102 (349)
+.++.++.|++||+|+||.+.+.|.
T Consensus 100 l~~~~~~~L~~GD~I~lG~~~l~f~ 124 (132)
T 3va4_A 100 LPPGVSHRLRDQELILFADFPCQYH 124 (132)
T ss_dssp ECTTCCEECCTTCEEEETTEEEEEE
T ss_pred cCCCCEEECCCCCEEEECCEEEEEE
Confidence 6777889999999999999855544
No 7
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.84 E-value=1.4e-20 Score=163.05 Aligned_cols=94 Identities=22% Similarity=0.406 Sum_probs=86.6
Q ss_pred CCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCC
Q 037445 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81 (349)
Q Consensus 2 ~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~ 81 (349)
++..+.|+|+.|+..|..|.|. ...++|||+ +.|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||++|.
T Consensus 43 p~~~~~L~v~~G~~~g~~~~L~-~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT~VNg~~i~-- 118 (143)
T 2kb3_A 43 PAGSALLVVKRGPNAGARFLLD-QPTTTAGRH-PESDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGTYVNREPRN-- 118 (143)
T ss_dssp SSSCEEEEEEESTTTTCEEEEC-SSEEEESSC-TTCSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCCEETTEECS--
T ss_pred CCccEEEEEEeCCCCCeEEEeC-CCCeeccCC-CCCCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCeEECCEEcc--
Confidence 3557899999999999999998 568999999 799999999999999999999999999999999999999999998
Q ss_pred CcEEecCCCEEEECCcceE
Q 037445 82 TPFDLRENDTIKLGDCTTI 100 (349)
Q Consensus 82 ~~v~L~~GD~I~LG~st~~ 100 (349)
.+.|++||.|+||...+.
T Consensus 119 -~~~L~~GD~I~iG~~~l~ 136 (143)
T 2kb3_A 119 -AQVMQTGDEIQIGKFRLV 136 (143)
T ss_dssp -EEECCTTEEEEETTEEEE
T ss_pred -eEECCCCCEEEECCEEEE
Confidence 589999999999997433
No 8
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.84 E-value=6.7e-22 Score=169.29 Aligned_cols=99 Identities=27% Similarity=0.404 Sum_probs=89.9
Q ss_pred CCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCC-CCEEeCCCCCCcccEEEEEEC--CEEEEEeCCCCCceEEcCeecC
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRG-NDVTIKDDGISSKHLIIESVS--GKWTIQDLDSCNGTFLNSTTLP 79 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~-cDIvL~DpsVSR~HA~I~~~~--g~~~L~DLgStNGTfVNG~rI~ 79 (349)
+..+.|.++.|+..+..+.|..+..++|||+ ++ |||+|+|+.|||.||.|.+.. +.|+|+|++|+|||||||++|.
T Consensus 32 ~~~~~L~v~~g~~~g~~~~l~~~~~~~IGR~-~~~~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg~~l~ 110 (140)
T 2jpe_A 32 PPGLHLDVVKGDKLIEKLIIDEKKYYLFGRN-PDLCDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLE 110 (140)
T ss_dssp CSSCBEEEESSSSEEEEECCSSCSBCCBSSC-TTTSSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEESSSCEEC
T ss_pred CcCEEEEEEcCCCcceEEEeCCCCeEEecCC-CccCCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEECCEECC
Confidence 3457899999999999999996566999999 67 999999999999999999987 8999999999999999999999
Q ss_pred CCCcEEecCCCEEEECCcceEEE
Q 037445 80 PNTPFDLRENDTIKLGDCTTISV 102 (349)
Q Consensus 80 ~~~~v~L~~GD~I~LG~st~~~v 102 (349)
++.++.|++||.|+||.+.+.|+
T Consensus 111 ~~~~~~L~~gd~i~~G~~~~~f~ 133 (140)
T 2jpe_A 111 PHKPQQIPIDSTVSFGASTRAYT 133 (140)
T ss_dssp SSSCCEECTTCCBBCSSCCCCBC
T ss_pred CCccEECCCCCEEEECCceEEEE
Confidence 88899999999999999865543
No 9
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.84 E-value=1.2e-20 Score=152.40 Aligned_cols=91 Identities=27% Similarity=0.435 Sum_probs=82.0
Q ss_pred CCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCC
Q 037445 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81 (349)
Q Consensus 2 ~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~ 81 (349)
.|+.+.|.+..|+ ++.+.|. ...++|||+ ++|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||+++.
T Consensus 2 ~~~~~~l~~~~g~--g~~~~l~-~~~~~IGR~-~~~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-- 75 (100)
T 3po8_A 2 AGTSVTLQLDDGS--GRTYQLR-EGSNIIGRG-QDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ-- 75 (100)
T ss_dssp -CEEEEEEECSSS--CCEEECC-SEEEEEESS-TTCSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTEECS--
T ss_pred CCcEEEEEEECCC--CcEEEEC-CCCEEEeCC-CCCCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCEECc--
Confidence 4677888887775 8899998 456999999 899999999999999999999999999999999999999999997
Q ss_pred CcEEecCCCEEEECCcce
Q 037445 82 TPFDLRENDTIKLGDCTT 99 (349)
Q Consensus 82 ~~v~L~~GD~I~LG~st~ 99 (349)
++.|++||.|+||...+
T Consensus 76 -~~~L~~gd~i~iG~~~~ 92 (100)
T 3po8_A 76 -EWQLADGDVIRLGHSEI 92 (100)
T ss_dssp -EEECCTTCEEEETTEEE
T ss_pred -eEECCCCCEEEECCEEE
Confidence 58999999999999743
No 10
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.83 E-value=1.6e-20 Score=158.13 Aligned_cols=94 Identities=22% Similarity=0.269 Sum_probs=85.5
Q ss_pred CCcEEEEEEe-CCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCC
Q 037445 3 PPGMKLIMVR-GPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPN 81 (349)
Q Consensus 3 PP~l~L~Vi~-Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~ 81 (349)
+++.+|+++. ++..+..|.|. ...++|||+ ++|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||+++..
T Consensus 10 ~~~~~L~v~~~~~~~g~~~~l~-~~~~~IGR~-~~~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~~i~~- 86 (128)
T 1r21_A 10 WPTRRLVTIKRSGVDGPHFPLS-LSTCLFGRG-IECDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDE- 86 (128)
T ss_dssp CCCEEEEEEEETTEEEEEEECC-SSEEEEESS-TTSSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTEECSS-
T ss_pred CCceEEEEEeCCCCCceEEEEC-CCCEEECCC-CCCCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCEECCC-
Confidence 5678999988 47789999998 467999999 7999999999999999999999999999999999999999999983
Q ss_pred CcEEecCCCEEEECCcceE
Q 037445 82 TPFDLRENDTIKLGDCTTI 100 (349)
Q Consensus 82 ~~v~L~~GD~I~LG~st~~ 100 (349)
++.|++||.|+||.+.+.
T Consensus 87 -~~~L~~Gd~i~iG~~~~~ 104 (128)
T 1r21_A 87 -PVRLKHGDVITIIDRSFR 104 (128)
T ss_dssp -CEECCTTEEEECSSCEEE
T ss_pred -cEEcCCCCEEEECCEEEE
Confidence 799999999999987443
No 11
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3e-20 Score=163.54 Aligned_cols=95 Identities=25% Similarity=0.371 Sum_probs=85.3
Q ss_pred CcEEEEEEeCCC----CCeEEEecCCCeEEEcCCC--------------CCCCEEeCCCCCCcccEEEEEECCE----EE
Q 037445 4 PGMKLIMVRGPR----SGETIEFKPGSKIRIGRIV--------------RGNDVTIKDDGISSKHLIIESVSGK----WT 61 (349)
Q Consensus 4 P~l~L~Vi~Gp~----~G~~~~L~~g~~~tIGR~~--------------~~cDIvL~DpsVSR~HA~I~~~~g~----~~ 61 (349)
+.|.|.|.+++. ..+.+.|..+..++|||++ ..|||+|+++.|||.||.|.+..+. |+
T Consensus 30 ~~~~l~v~k~g~~~~~~~~~~~L~~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~~~~~ 109 (158)
T 3els_A 30 TMYELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCY 109 (158)
T ss_dssp CCEEEEEEEGGGGGGCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTEEEEE
T ss_pred CceEEEEEeCCccCcccceEEEecCCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCeeEEE
Confidence 468899998765 6679999988899999983 2499999999999999999997655 99
Q ss_pred EEeCCCCCceEEcCeecCCCCcEEecCCCEEEECCcc
Q 037445 62 IQDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98 (349)
Q Consensus 62 L~DLgStNGTfVNG~rI~~~~~v~L~~GD~I~LG~st 98 (349)
|+|++|+|||||||++|.++.++.|++||+|+||.+.
T Consensus 110 l~Dl~StNGT~VNg~ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 110 VMDLDSSNGTCLNNVVIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEECSCSSCCEETTEECCTTCCEECCTTEEEESSSCG
T ss_pred EEeCCCCCccEECCEEcCCCceEEcCCCCEEEECCCC
Confidence 9999999999999999999889999999999999764
No 12
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.82 E-value=4.8e-20 Score=163.07 Aligned_cols=91 Identities=23% Similarity=0.436 Sum_probs=84.9
Q ss_pred CCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCCC
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNT 82 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~~ 82 (349)
+..+.|+|..|+..+..|.|. ...++|||+ +.|||+|+|+.|||+||.|.+.++.|+|+|++|+|||||||++|.
T Consensus 53 ~~~~~L~v~~G~~~g~~~~L~-~~~~~IGR~-~~~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VNg~~i~--- 127 (162)
T 2kfu_A 53 PGSALLVVKRGPNAGSRFLLD-QAITSAGRH-PDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD--- 127 (162)
T ss_dssp SSCCEEEEEESTTCSCEEETT-SSEEEEESC-SSSSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEETTBCCS---
T ss_pred CccEEEEEEeCCCCCeEEEEC-CCCEEECCC-CCCCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEECCEEcc---
Confidence 446789999999999999998 568999999 799999999999999999999999999999999999999999998
Q ss_pred cEEecCCCEEEECCcc
Q 037445 83 PFDLRENDTIKLGDCT 98 (349)
Q Consensus 83 ~v~L~~GD~I~LG~st 98 (349)
.+.|++||.|+||...
T Consensus 128 ~~~L~~GD~I~iG~~~ 143 (162)
T 2kfu_A 128 SAVLANGDEVQIGKFR 143 (162)
T ss_dssp EEECCSSCEEEETTEE
T ss_pred eEECCCCCEEEECCEE
Confidence 5899999999999973
No 13
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.81 E-value=1.2e-19 Score=154.52 Aligned_cols=101 Identities=19% Similarity=0.283 Sum_probs=85.9
Q ss_pred CCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE---CC--EEEEEeC-----CCCCceE
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV---SG--KWTIQDL-----DSCNGTF 72 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~---~g--~~~L~DL-----gStNGTf 72 (349)
|+...+.++.++..+..|.|. +..++|||+ +.|||+|+++.|||.||.|.+. ++ .|+|+|+ +|+||||
T Consensus 8 p~~~~~lvv~~~~~~~~~~l~-~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~ 85 (131)
T 3hx1_A 8 PLQEHILIILDDAGRREVLLT-ETFYTIGRS-PRADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLM 85 (131)
T ss_dssp -CCEEEEEEEETTEEEEEEEC-SSEEEEESS-TTSSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEE
T ss_pred CCcceEEEEECCCCcEEEEEC-CCCEEECCC-CCCCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceE
Confidence 556677777877778899998 567999999 7899999999999999999986 23 4999999 7999999
Q ss_pred EcCeecCCCCcEEecCCCEEEECCcceEEEEEEeCC
Q 037445 73 LNSTTLPPNTPFDLRENDTIKLGDCTTISVQMITMD 108 (349)
Q Consensus 73 VNG~rI~~~~~v~L~~GD~I~LG~st~~~v~f~~~d 108 (349)
|||++|.+ +.|++||+|+||...+.++.+...+
T Consensus 86 vNg~~i~~---~~L~~GD~I~iG~~~~~~~~~~~~d 118 (131)
T 3hx1_A 86 INGKKVQE---HIIQTGDEIVMGPQVSVRYEYRRRD 118 (131)
T ss_dssp ETTEEESE---EECCTTCEEECSTTCEEEEEEECC-
T ss_pred ECCEEeEe---EECCCCCEEEECCEEEEEEEEecCC
Confidence 99999984 9999999999999988777666443
No 14
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.81 E-value=2.2e-19 Score=155.67 Aligned_cols=91 Identities=26% Similarity=0.347 Sum_probs=81.7
Q ss_pred CCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEE--------ECCEEEEEeCCCCCceEEc
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIES--------VSGKWTIQDLDSCNGTFLN 74 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~--------~~g~~~L~DLgStNGTfVN 74 (349)
+++.+|.++. +..+..+.|..+..++|||+ +.|||+|+++.|||.||.|.+ .++.|+|+|+ |+||||||
T Consensus 16 ~~~~~L~~~~-~~~g~~~~l~~~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT~VN 92 (151)
T 2jqj_A 16 TCLGHLVNLI-PGKEQKVEITNRNVTTIGRS-RSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGTFIN 92 (151)
T ss_dssp CEEEEEEEEE-TTEEEEEEEECCSCEEEESS-TTSSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEET
T ss_pred CceEEEEEec-CCCceEEEEcCCCeEEeCCC-CCCCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCeEEC
Confidence 4666788775 44688999986577999999 799999999999999999999 7788999999 99999999
Q ss_pred CeecCCCCcEEecCCCEEEECCc
Q 037445 75 STTLPPNTPFDLRENDTIKLGDC 97 (349)
Q Consensus 75 G~rI~~~~~v~L~~GD~I~LG~s 97 (349)
|++|.++ ++.|.+||+|.||.+
T Consensus 93 g~~i~~~-~~~L~~GD~I~lG~~ 114 (151)
T 2jqj_A 93 GNRLVKK-DYILKNGDRIVFGKS 114 (151)
T ss_dssp TEECCSS-CEEECSSEEEEETTT
T ss_pred CEEcCCC-ceECCCCCEEEECCC
Confidence 9999977 899999999999995
No 15
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.80 E-value=7.5e-20 Score=151.19 Aligned_cols=93 Identities=25% Similarity=0.316 Sum_probs=83.1
Q ss_pred CCCcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCC-CCCcccEEEEEE--CCEEEEEeCCCCCceEEcCeec
Q 037445 2 EPPGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDD-GISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTL 78 (349)
Q Consensus 2 ~PP~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~Dp-sVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~rI 78 (349)
+.|..+|..+.+...+..+.|. +..++|||+ +.|||+|+++ .|||.||.|.+. ++.|+|+| +|+|||||||++|
T Consensus 1 M~~wg~L~~~~~~~~~~~~~l~-~~~~~iGR~-~~~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l 77 (116)
T 1lgp_A 1 MQPWGRLLRLGAEEGEPHVLLR-KREWTIGRR-RGCDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKV 77 (116)
T ss_dssp CCCCEEECCTTCCSSSCCEEEC-SSEEEEESS-TTSSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCC
T ss_pred CCCEEEEEEeCCCCCccEEEEC-CCCEEECCC-CCCCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEc
Confidence 0467788888776777889998 578999999 7999999875 999999999997 78899999 9999999999999
Q ss_pred CCCCcEEecCCCEEEECCc
Q 037445 79 PPNTPFDLRENDTIKLGDC 97 (349)
Q Consensus 79 ~~~~~v~L~~GD~I~LG~s 97 (349)
.++.++.|++||.|.||..
T Consensus 78 ~~~~~~~L~~GD~i~~G~~ 96 (116)
T 1lgp_A 78 VKKQTCPLQTGDVIYLVYR 96 (116)
T ss_dssp CCSSCCCCCTTCEEEEECC
T ss_pred CCCCcEECCCCCEEEEecc
Confidence 9888999999999999986
No 16
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.80 E-value=2.1e-19 Score=164.84 Aligned_cols=94 Identities=27% Similarity=0.376 Sum_probs=83.0
Q ss_pred cEEEEEEeCCC----CCeEEEecCCCeEEEcCCC--------------CCCCEEeCCCCCCcccEEEEEECC----EEEE
Q 037445 5 GMKLIMVRGPR----SGETIEFKPGSKIRIGRIV--------------RGNDVTIKDDGISSKHLIIESVSG----KWTI 62 (349)
Q Consensus 5 ~l~L~Vi~Gp~----~G~~~~L~~g~~~tIGR~~--------------~~cDIvL~DpsVSR~HA~I~~~~g----~~~L 62 (349)
.|.|.|++++. ....+.|..+..|+|||++ ..|||+|+|+.|||+||.|.+... .|+|
T Consensus 78 ~~~L~v~k~g~k~~~~i~~~~L~~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~~~~~l 157 (205)
T 3elv_A 78 MYELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYV 157 (205)
T ss_dssp CEEEEEEEGGGCTTCCSEEEECSSCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTEEEEEE
T ss_pred ceEEEEEeCCCcccccceEEEecCCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCceeEEE
Confidence 48899998654 5678999878899999983 249999999999999999998642 4999
Q ss_pred EeCCCCCceEEcCeecCCCCcEEecCCCEEEECCcc
Q 037445 63 QDLDSCNGTFLNSTTLPPNTPFDLRENDTIKLGDCT 98 (349)
Q Consensus 63 ~DLgStNGTfVNG~rI~~~~~v~L~~GD~I~LG~st 98 (349)
+||+|+|||||||++|.+..++.|++||+|+||.+.
T Consensus 158 ~DLgStNGTfVNG~rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 158 MDLDSSNGTCLNNVVIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EECSCSSCCEETTEECCBTSCEECCTTCEEESSSSG
T ss_pred EeCCCCCCCeECCEECCCCceeECCCCCEEEECCCC
Confidence 999999999999999998888999999999999774
No 17
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.79 E-value=4.9e-19 Score=151.35 Aligned_cols=89 Identities=28% Similarity=0.454 Sum_probs=77.4
Q ss_pred EEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCC----CCcccEEEEE-ECCEEEEEeCCCCCceEEcCeecCCC
Q 037445 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG----ISSKHLIIES-VSGKWTIQDLDSCNGTFLNSTTLPPN 81 (349)
Q Consensus 7 ~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~Dps----VSR~HA~I~~-~~g~~~L~DLgStNGTfVNG~rI~~~ 81 (349)
|..+..|+..+ .+.|..+..++|||+ +.|||+|+++. |||.||.|.+ .++.|+|+|++|+|||||||++|.++
T Consensus 10 w~l~~~G~~~~-~~~l~~~~~~~IGR~-~~~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~l~~~ 87 (138)
T 2pie_A 10 WCLRRVGMSAG-WLLLEDGCEVTVGRG-FGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPL 87 (138)
T ss_dssp EEEEETTCSSC-BEEECTTCCEEEESS-SSSSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSSCEEETTEECCTT
T ss_pred EEEEEeCCCCC-EEEecCCCeEEECCC-CCCCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECCCCCCeEECCEEcCCC
Confidence 44444566554 677765678999999 79999999998 9999999999 57789999999999999999999998
Q ss_pred CcEEecCCCEEEECCc
Q 037445 82 TPFDLRENDTIKLGDC 97 (349)
Q Consensus 82 ~~v~L~~GD~I~LG~s 97 (349)
.++.|++||+|+||..
T Consensus 88 ~~~~L~~GD~I~lG~~ 103 (138)
T 2pie_A 88 RVYSIHQGDYIQLGVP 103 (138)
T ss_dssp CCEECCTTCEEEESCC
T ss_pred CcEECCCCCEEEECCC
Confidence 8999999999999983
No 18
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.78 E-value=3.9e-19 Score=156.51 Aligned_cols=93 Identities=24% Similarity=0.274 Sum_probs=84.9
Q ss_pred CCcEEEEEEeCCCCCeEEEecCC----------CeEEEcCCCCCCCEEeCCC-CCCcccEEEEEE-CCEEEEEeCCCCCc
Q 037445 3 PPGMKLIMVRGPRSGETIEFKPG----------SKIRIGRIVRGNDVTIKDD-GISSKHLIIESV-SGKWTIQDLDSCNG 70 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~~g----------~~~tIGR~~~~cDIvL~Dp-sVSR~HA~I~~~-~g~~~L~DLgStNG 70 (349)
+..++|.++.|+..+..+.|..+ ..++|||+ +.|||+|+|+ .|||.||.|.+. ++.|+|+|+ |+||
T Consensus 31 ~~~~~L~v~~G~~~g~~~~l~~~~v~~~~~~~~~~~~IGR~-~~~di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl-S~NG 108 (164)
T 1g3g_A 31 NIVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRN-PACDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNG 108 (164)
T ss_dssp SCCEEEECSSSSSCCEEECCCHHHHHHCSSSCCEEEEEESS-SSSSEECCCCTTTTSSCEEEEECSTTCEEEEEC-CSSC
T ss_pred CccEEEEEecCCCCCeEEEeccccccccccccCCcEEECCC-CCCCEEeCCcCCcChhHEEEEECCCCCEEEEEC-CCCC
Confidence 45689999999999999999832 37899999 7899999998 699999999994 889999999 9999
Q ss_pred eEEcCeecCCCCcEEecCCCEEEECCc
Q 037445 71 TFLNSTTLPPNTPFDLRENDTIKLGDC 97 (349)
Q Consensus 71 TfVNG~rI~~~~~v~L~~GD~I~LG~s 97 (349)
|||||++|.++.++.|.+||.|.||.+
T Consensus 109 T~vNg~~i~~~~~~~L~~GD~I~iG~~ 135 (164)
T 1g3g_A 109 TWLNGQKVEKNSNQLLSQGDEITVGVG 135 (164)
T ss_dssp EEETTEEECTTEEEECCTTCEEEESCS
T ss_pred eEECCEEcCCCCceEcCCCCEEEECCC
Confidence 999999999888899999999999996
No 19
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.78 E-value=2.2e-18 Score=149.18 Aligned_cols=97 Identities=23% Similarity=0.233 Sum_probs=82.0
Q ss_pred CcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCC---------CCcccEEEEEECC-----EEEEEeCCCCC
Q 037445 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG---------ISSKHLIIESVSG-----KWTIQDLDSCN 69 (349)
Q Consensus 4 P~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~Dps---------VSR~HA~I~~~~g-----~~~L~DLgStN 69 (349)
+..+|..+.+.. ..+.|. +..++|||+ +.|||+|+++. |||.||.|.+..+ .|+|+|+ |+|
T Consensus 29 ~w~~L~~~~~~~--~~i~L~-~~~~~IGR~-~~~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~~~i~D~-StN 103 (149)
T 1gxc_A 29 PWARLWALQDGF--ANLECV-NDNYWFGRD-KSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDH-SGN 103 (149)
T ss_dssp CCEEEEECSTTC--CCEEEC-SSEEEEESS-TTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEEC-CSS
T ss_pred eeEEEEEcCCCC--ceEEEC-CCCEEecCC-CCCCEEECCccccccccCCcCchhheEEEEECCCCceeEEEEEEC-CCC
Confidence 455777776543 348887 568999999 79999999985 9999999999876 8999997 999
Q ss_pred ceEEcCeecCCCCcEEecCCCEEEECCcceEEEEEE
Q 037445 70 GTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQMI 105 (349)
Q Consensus 70 GTfVNG~rI~~~~~v~L~~GD~I~LG~st~~~v~f~ 105 (349)
||||||++|.++..+.|++||+|.||......+.|.
T Consensus 104 GT~VNg~~i~~~~~~~L~~GD~I~lG~~~~~~f~f~ 139 (149)
T 1gxc_A 104 GTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFF 139 (149)
T ss_dssp CEEETTEECCTTCEEECCTTEEEEESSTTCEEEEEE
T ss_pred CeEECCEECCCCCeEECCCCCEEEECCCCCeEEEEE
Confidence 999999999998899999999999999754444454
No 20
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.77 E-value=1.1e-18 Score=154.21 Aligned_cols=88 Identities=30% Similarity=0.462 Sum_probs=77.5
Q ss_pred cEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCCCcE
Q 037445 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPF 84 (349)
Q Consensus 5 ~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~~~v 84 (349)
.+.|++..+ .+..|.|. ...++|||+ ++|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||++|. .+
T Consensus 67 ~l~L~v~~g--~g~~~~L~-~~~~~IGR~-~~~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~~i~---~~ 139 (157)
T 3oun_A 67 SVTLQLDDG--SGRTYQLR-EGSNIIGRG-QDAQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ---EW 139 (157)
T ss_dssp CCEEEETTT--TCCEEECC-SEEEEEESS-TTCSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECS---EE
T ss_pred EEEEEEcCC--CCeEEEEC-CCcEEEEeC-CCCCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCEECc---eE
Confidence 344444444 58899998 456999999 899999999999999999999999999999999999999999997 59
Q ss_pred EecCCCEEEECCcce
Q 037445 85 DLRENDTIKLGDCTT 99 (349)
Q Consensus 85 ~L~~GD~I~LG~st~ 99 (349)
.|++||+|+||.+.+
T Consensus 140 ~L~~GD~I~lG~~~l 154 (157)
T 3oun_A 140 QLADGDVIRLGHSEI 154 (157)
T ss_dssp ECCTTCEEEETTEEE
T ss_pred ECCCCCEEEECCEEE
Confidence 999999999999743
No 21
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.76 E-value=1.2e-18 Score=152.69 Aligned_cols=97 Identities=22% Similarity=0.242 Sum_probs=85.5
Q ss_pred CcEEEEEEeCCCCCeEEEecCC-CeEEEcCCCCCCCEEeCCCCCCcccEEEEEEC---------------CEEEEEeCCC
Q 037445 4 PGMKLIMVRGPRSGETIEFKPG-SKIRIGRIVRGNDVTIKDDGISSKHLIIESVS---------------GKWTIQDLDS 67 (349)
Q Consensus 4 P~l~L~Vi~Gp~~G~~~~L~~g-~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~---------------g~~~L~DLgS 67 (349)
..+.|..+.+...+..+.|..+ ..++|||+ +.|||+|+|+.|||.||.|.+.. +.|+|+|+ |
T Consensus 4 ~~l~L~p~~~~~~~~~i~L~~~~~~~~IGR~-~~~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~Dl-S 81 (158)
T 1dmz_A 4 RFLTLKPLPDSIIQESLEIQQGVNPFFIGRS-EDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT-G 81 (158)
T ss_dssp CCEEEEECTTSSCCCCEEETTSCSCEEEESS-TTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC-S
T ss_pred eEEEEEeCCCCccceEEEEcCCCceEEECCC-CCCCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEEC-C
Confidence 4567888888878889999853 35999999 79999999999999999999976 78999999 9
Q ss_pred CCceEEcCeecCCCCcEEecCCCEEEE-----CCcceEEE
Q 037445 68 CNGTFLNSTTLPPNTPFDLRENDTIKL-----GDCTTISV 102 (349)
Q Consensus 68 tNGTfVNG~rI~~~~~v~L~~GD~I~L-----G~st~~~v 102 (349)
+|||||||++|.++.++.|++||+|+| |...+.|.
T Consensus 82 tNGT~VNg~ri~~~~~~~L~~GD~I~l~~d~~G~~~l~f~ 121 (158)
T 1dmz_A 82 TNVSYLNNNRMIQGTKFLLQDGDEIKIIWDKNNKFVIGFK 121 (158)
T ss_dssp TTCCEETTEECCSSEEEECCSSCCEESCCCTTTTCCCCEE
T ss_pred cCCeEECCEEcCCCceEEcCCCCEEEEeecCCCCEEEEEE
Confidence 999999999999888899999999999 88755443
No 22
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.75 E-value=3.8e-18 Score=147.10 Aligned_cols=89 Identities=29% Similarity=0.459 Sum_probs=77.1
Q ss_pred EEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCC----CCcccEEEEEE-CCEEEEEeCCCCCceEEcCeecCC
Q 037445 6 MKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDG----ISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPP 80 (349)
Q Consensus 6 l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~Dps----VSR~HA~I~~~-~g~~~L~DLgStNGTfVNG~rI~~ 80 (349)
|.|+ ..|+..+ .+.|..+..++|||+ +.|||+|+++. |||.||.|.+. ++.|+|+|++|+|||||||++|.+
T Consensus 18 w~L~-~~G~~~~-~~~l~~~~~~~IGR~-~~~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~i~~ 94 (145)
T 2csw_A 18 WCLR-RVGMSAG-WLLLEDGCEVTVGRG-FGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEP 94 (145)
T ss_dssp EEEC-CTTCSCC-BEECCTTCCEEEESS-TTSSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSCSSCEEESSCBCCB
T ss_pred EEEE-EeCCCCC-eEEeCCCCcEEECCC-CCCCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECCCCCCeEECCEECCC
Confidence 3444 5566554 566655678999999 79999999998 99999999994 778999999999999999999998
Q ss_pred CCcEEecCCCEEEECCc
Q 037445 81 NTPFDLRENDTIKLGDC 97 (349)
Q Consensus 81 ~~~v~L~~GD~I~LG~s 97 (349)
+.++.|++||+|+||..
T Consensus 95 ~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 95 LRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp TCCEECCSSCCEEESCC
T ss_pred CccEECCCCCEEEECCC
Confidence 88999999999999983
No 23
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.74 E-value=1.3e-17 Score=140.53 Aligned_cols=93 Identities=24% Similarity=0.277 Sum_probs=80.5
Q ss_pred CcEEEEEEeCCCCCeEEEecC----------CCeEEEcCCCCCCCEEeCCC-CCCcccEEEEE-ECCEEEEEeCCCCCce
Q 037445 4 PGMKLIMVRGPRSGETIEFKP----------GSKIRIGRIVRGNDVTIKDD-GISSKHLIIES-VSGKWTIQDLDSCNGT 71 (349)
Q Consensus 4 P~l~L~Vi~Gp~~G~~~~L~~----------g~~~tIGR~~~~cDIvL~Dp-sVSR~HA~I~~-~~g~~~L~DLgStNGT 71 (349)
..++|....+......+.... +..++|||+ +.|||+|+|+ .|||.||.|.+ .++.|+|+|+ |+|||
T Consensus 4 ~~~~L~~~~~~~p~~~l~~~~~~i~~~~~~~~~~~~IGR~-~~~di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT 81 (127)
T 1g6g_A 4 IVCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRN-PACDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGT 81 (127)
T ss_dssp EEEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESS-TTSSEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCC
T ss_pred eEEEEEECCCCCCceEeeccccceeeeeecCCCCEEECCC-CCCCEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCe
Confidence 456788888877766665551 237999999 7899999998 69999999999 4888999999 99999
Q ss_pred EEcCeecCCCCcEEecCCCEEEECCcc
Q 037445 72 FLNSTTLPPNTPFDLRENDTIKLGDCT 98 (349)
Q Consensus 72 fVNG~rI~~~~~v~L~~GD~I~LG~st 98 (349)
||||++|.++.++.|++||.|+||.+.
T Consensus 82 ~vNg~~l~~~~~~~L~~Gd~I~lG~~~ 108 (127)
T 1g6g_A 82 WLNGQKVEKNSNQLLSQGDEITVGVGV 108 (127)
T ss_dssp EETTEECCTTCCEECCTTCEEEECTTS
T ss_pred EECCEEcCCCCeEEcCCCCEEEECCCc
Confidence 999999999889999999999999874
No 24
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.73 E-value=7.4e-18 Score=140.74 Aligned_cols=90 Identities=13% Similarity=0.194 Sum_probs=78.1
Q ss_pred cEEEEEEeCC-CC----CeEEEecCCCeEEEcCC-CCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeec
Q 037445 5 GMKLIMVRGP-RS----GETIEFKPGSKIRIGRI-VRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTL 78 (349)
Q Consensus 5 ~l~L~Vi~Gp-~~----G~~~~L~~g~~~tIGR~-~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI 78 (349)
..+|.++.++ .. +..|.|.. ..++|||. .+.|||+|+++.||+.||.|.+.++.|+|+|++|+|||||||++|
T Consensus 11 ~p~Lv~l~~d~~~s~~~~~~~~L~~-~~~~IGr~r~~~~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~~i 89 (120)
T 1wln_A 11 LPYLVELSPDGSDSRDKPKLYRLQL-SVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRI 89 (120)
T ss_dssp CCEEEEECSSSCCCSSCCCEEECCS-EEEECSSSCCSTTCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSCBC
T ss_pred cCEEEEeCCChhhccCccEEEEECC-CCEEECCCCCCCCcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCEEc
Confidence 3477787763 22 78899984 56899963 269999999999999999999999999999999999999999999
Q ss_pred CCCCcEEecCCCEEEECCc
Q 037445 79 PPNTPFDLRENDTIKLGDC 97 (349)
Q Consensus 79 ~~~~~v~L~~GD~I~LG~s 97 (349)
. .++.|++||.|.||..
T Consensus 90 ~--~~~~L~~GD~I~iG~~ 106 (120)
T 1wln_A 90 S--ETTMLQSGMRLQFGTS 106 (120)
T ss_dssp S--SCEEECTTCEEEETTT
T ss_pred C--CCEECCCCCEEEECCc
Confidence 8 3789999999999994
No 25
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.72 E-value=3.2e-18 Score=153.72 Aligned_cols=93 Identities=23% Similarity=0.290 Sum_probs=79.7
Q ss_pred EEEEEEeCCCCCeEEEecCC-CeEEEcCCCCCCCEEeCCCCCCcccEEEEEEC---------------CEEEEEeCCCCC
Q 037445 6 MKLIMVRGPRSGETIEFKPG-SKIRIGRIVRGNDVTIKDDGISSKHLIIESVS---------------GKWTIQDLDSCN 69 (349)
Q Consensus 6 l~L~Vi~Gp~~G~~~~L~~g-~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~---------------g~~~L~DLgStN 69 (349)
+.|....+...+..+.|..+ ..++|||+ +.|||+|+|+.|||.||.|.+.. +.|+|+|+ |+|
T Consensus 30 l~L~~~~~~~~~~~i~L~~~~~~~~IGR~-~~~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~~~~l~Dl-StN 107 (182)
T 1qu5_A 30 LTLKPLPDSIIQESLEIQQGVNPFFIGRS-EDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT-GTN 107 (182)
T ss_dssp EEECCCTTSSSCSCCCBTTCCSSEEESSS-TTSSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCCEEEECCC-SSS
T ss_pred EEEEeCCCCCcceEEEEcCCCceEEECCC-CCCCEEECCCCcChHHeEEEEecCccccccccccccccceEEEEEC-CcC
Confidence 44444455556678888753 35999999 79999999999999999999987 89999999 999
Q ss_pred ceEEcCeecCCCCcEEecCCCEEEE-----CCcceE
Q 037445 70 GTFLNSTTLPPNTPFDLRENDTIKL-----GDCTTI 100 (349)
Q Consensus 70 GTfVNG~rI~~~~~v~L~~GD~I~L-----G~st~~ 100 (349)
||||||++|.++.++.|++||+|+| |...+.
T Consensus 108 GT~VNg~ri~~~~~~~L~~GD~I~l~~d~~G~~~l~ 143 (182)
T 1qu5_A 108 VSYLNNNRMIQGTKFLLQDGDEIKIIWDKNNKFVIG 143 (182)
T ss_dssp CCEETTEECCSSEEEECCTTBCCEEEEEGGGTEEEE
T ss_pred CeEECCEEcCCCcceEcCCCCEEEEEEcCCCCEEEE
Confidence 9999999999888899999999999 887433
No 26
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.68 E-value=8.3e-17 Score=156.90 Aligned_cols=87 Identities=24% Similarity=0.445 Sum_probs=76.9
Q ss_pred EEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCCCcEEec
Q 037445 8 LIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTPFDLR 87 (349)
Q Consensus 8 L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~~~v~L~ 87 (349)
+.++.+ ..|..|.|. +..++|||+ ++|||+|+|+.|||.||.|.+.++.|+|+|++|+|||||||++|. .++.|+
T Consensus 290 ~~l~~~-~~g~~~~l~-~~~~~iGR~-~~~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~--~~~~L~ 364 (388)
T 2ff4_A 290 AYLHDI-ASGRGYPLQ-AAATRIGRL-HDNDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIR--SAVTLN 364 (388)
T ss_dssp CEEEET-TTCCEEECC-SSEEEEESS-TTSSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECS--SEEEEC
T ss_pred EEEEEC-CCCcEEEEC-CCCEEEecC-CCCeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCEECC--CceECC
Confidence 344443 467899998 468999999 799999999999999999999999999999999999999999995 479999
Q ss_pred CCCEEEECCcce
Q 037445 88 ENDTIKLGDCTT 99 (349)
Q Consensus 88 ~GD~I~LG~st~ 99 (349)
+||.|+||.+.+
T Consensus 365 ~gd~i~~G~~~~ 376 (388)
T 2ff4_A 365 DGDHIRICDHEF 376 (388)
T ss_dssp TTCEEEETTEEE
T ss_pred CCCEEEECCEEE
Confidence 999999999743
No 27
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.60 E-value=6.2e-15 Score=128.72 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=72.5
Q ss_pred EEEEEEeCC--CCCe-EEEecCCCeEEEcCCC--CCCCEEeCCCCCCcccEEEEEECC----EEEEEeCCCCCceEEcCe
Q 037445 6 MKLIMVRGP--RSGE-TIEFKPGSKIRIGRIV--RGNDVTIKDDGISSKHLIIESVSG----KWTIQDLDSCNGTFLNST 76 (349)
Q Consensus 6 l~L~Vi~Gp--~~G~-~~~L~~g~~~tIGR~~--~~cDIvL~DpsVSR~HA~I~~~~g----~~~L~DLgStNGTfVNG~ 76 (349)
.+|+-++.+ ..+. .+.|. ...++|||.. ..|||+|+++.||+.||.|.+.++ .|++.|++|+|||||||+
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~-~g~t~IGR~~~~~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~VNG~ 117 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIK-DGITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGK 117 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECC-SEEEEEECSSCSSCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEETTE
T ss_pred ceEEEecCCcccCceEEEEeC-CCCEEEcCCCCCCCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEECCE
Confidence 355555543 2343 34555 4578999973 279999999999999999999864 589999999999999999
Q ss_pred ecCCCCcEEecCCCEEEECCcc
Q 037445 77 TLPPNTPFDLRENDTIKLGDCT 98 (349)
Q Consensus 77 rI~~~~~v~L~~GD~I~LG~st 98 (349)
+|.. ++.|++||.|.||.+.
T Consensus 118 ~i~~--~~~L~~GD~I~~G~~~ 137 (154)
T 4ejq_A 118 KVTE--PSILRSGNRIIMGKSH 137 (154)
T ss_dssp ECCS--CEECCTTCEEEETTTE
T ss_pred EcCC--ceECCCCCEEEECCcE
Confidence 9964 7899999999999874
No 28
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.58 E-value=5.5e-15 Score=125.63 Aligned_cols=88 Identities=22% Similarity=0.337 Sum_probs=72.4
Q ss_pred cEEEEEEeCCC--CC-eEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE-CCEEEEEeCCCCCceEEcCeecCC
Q 037445 5 GMKLIMVRGPR--SG-ETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV-SGKWTIQDLDSCNGTFLNSTTLPP 80 (349)
Q Consensus 5 ~l~L~Vi~Gp~--~G-~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~-~g~~~L~DLgStNGTfVNG~rI~~ 80 (349)
..+|..++++. .+ ..+.|.. ..+|||+ ++|||+|+++.||+.||.|.+. ++.|+|+|++ +|||||||++|..
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~--~t~IGR~-~~~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG~~V~~ 101 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKE--HTLIGSA-NSQDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNGSSVSS 101 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCS--EEEEESS-TTCSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETTEECCS
T ss_pred ccEEEEeCCCCccCceEEEECCC--CeEECCC-CCCCEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECCEEcCC
Confidence 34667776642 22 3555653 5899999 7999999999999999999994 7889999995 7999999999984
Q ss_pred CCcEEecCCCEEEECCcc
Q 037445 81 NTPFDLRENDTIKLGDCT 98 (349)
Q Consensus 81 ~~~v~L~~GD~I~LG~st 98 (349)
++.|++||.|.||...
T Consensus 102 --~~~L~~GD~I~lG~~~ 117 (124)
T 3fm8_A 102 --PIQLHHGDRILWGNNH 117 (124)
T ss_dssp --CEEECTTCEEEETTTE
T ss_pred --cEECCCCCEEEECCCe
Confidence 7999999999999864
No 29
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.57 E-value=1.7e-14 Score=123.15 Aligned_cols=96 Identities=16% Similarity=0.235 Sum_probs=86.4
Q ss_pred cEEEEEEeCCCCCeEEEecCCCeEEEcCCCC-CCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCceEEcCeecCCCCc
Q 037445 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVR-GNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNGTFLNSTTLPPNTP 83 (349)
Q Consensus 5 ~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~-~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNGTfVNG~rI~~~~~ 83 (349)
.|.|+|++|+..|..+.|. ...++||++ + .|||+|.|+.||+.||.|...+++|+|. +|.||||+||+++.. .
T Consensus 4 ~~klrvlsG~~~G~~l~L~-~~~~~IGs~-~~~~DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vdG~~v~~--~ 77 (123)
T 4a0e_A 4 SWVCRFYQGKHRGVEVELP-HGRCVFGSD-PLQSDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQEGLPVPL--G 77 (123)
T ss_dssp CEEEEECSGGGTTCEEEEC-SEEEEEESC-TTTCSEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEETTEECCT--T
T ss_pred eEEEEEecCCCCCcEEEcC-CCcEEECCC-CCCCCEEEeCCCccceeEEEEECCCeEEEE--eccCCEEECCEEccc--c
Confidence 5899999999999999999 568999999 7 9999999999999999999999999998 699999999999885 3
Q ss_pred EEecCCCEEEECCcceEEEEEEeCCC
Q 037445 84 FDLRENDTIKLGDCTTISVQMITMDS 109 (349)
Q Consensus 84 v~L~~GD~I~LG~st~~~v~f~~~d~ 109 (349)
..|.+|+.|.+|.. .+.|...++
T Consensus 78 ~~L~~g~~l~lG~~---~l~~~~~~~ 100 (123)
T 4a0e_A 78 TLLRAGSCLEVGFL---LWTFVAVGQ 100 (123)
T ss_dssp CBCCTTSCEEETTE---EEEEEETTS
T ss_pred cccCCCCEEEEccE---EEEEEcCCC
Confidence 49999999999998 555655444
No 30
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.53 E-value=2e-14 Score=139.46 Aligned_cols=93 Identities=20% Similarity=0.292 Sum_probs=73.5
Q ss_pred cEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCC---CEEeCCCCCCcccEEEEEEC-----------CEEEEEeCCCCCc
Q 037445 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGN---DVTIKDDGISSKHLIIESVS-----------GKWTIQDLDSCNG 70 (349)
Q Consensus 5 ~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~c---DIvL~DpsVSR~HA~I~~~~-----------g~~~L~DLgStNG 70 (349)
+|.|....+...|+.+.|.++. |+|||. ..+ +|.++|++|||+||.|.+.. ..++|+||+|+||
T Consensus 1 MWiL~~~~d~~~Gkr~~L~pg~-YlIGR~-~~~~~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLgSknG 78 (325)
T 3huf_A 1 MWIIEAEGDILKGKSRILFPGT-YIVGRN-VSDDSSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLDTKFG 78 (325)
T ss_dssp CEEEEESTTTTTTCCEEECSEE-EEEESS-CCCBTTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECSCSSC
T ss_pred CcEEeccCccCCCeEEEecCCe-EEECCC-CCccCceeecCCCCccccceEEEEecccccccccCCcceEEEEECCCCCC
Confidence 4666653223578899998776 999998 443 36899999999999999862 3799999999999
Q ss_pred eEEcCeecCCCCcEEecCCCEEEECCcce
Q 037445 71 TFLNSTTLPPNTPFDLRENDTIKLGDCTT 99 (349)
Q Consensus 71 TfVNG~rI~~~~~v~L~~GD~I~LG~st~ 99 (349)
|||||++|....+....+||.|+||....
T Consensus 79 TfVNGerI~~~~~~L~~dgd~I~fG~~~~ 107 (325)
T 3huf_A 79 TKVNEKVVGQNGDSYKEKDLKIQLGKCPF 107 (325)
T ss_dssp EEETTEECCTTCEEECSSEEEEEETTCSS
T ss_pred EEECCEECCCceeeecCCCCEEEecCCcc
Confidence 99999999864443445899999998733
No 31
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.34 E-value=2e-12 Score=106.97 Aligned_cols=73 Identities=21% Similarity=0.353 Sum_probs=63.6
Q ss_pred EEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEECCEEEEEeCCCCCc-eEEcCeecCCCCcEEecCCCE------
Q 037445 19 TIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVSGKWTIQDLDSCNG-TFLNSTTLPPNTPFDLRENDT------ 91 (349)
Q Consensus 19 ~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~g~~~L~DLgStNG-TfVNG~rI~~~~~v~L~~GD~------ 91 (349)
.+.|.....|+|||+ ++|+++|++++||+.||.|.....+.|+.. |+|| +||||+++. ++.|..||.
T Consensus 14 ~v~l~~~~~~rIGR~-~~~~l~LddpsVs~~HAti~~~~~G~~~l~--S~nGtVFVNGqrv~---~~~I~~gDtI~g~v~ 87 (102)
T 3uv0_A 14 AILLKADTIYRIGRQ-KGLEISIADESMELAHATACILRRGVVRLA--ALVGKIFVNDQEET---VVDIGMENAVAGKVK 87 (102)
T ss_dssp CEECCTTCCEEEESS-TTSTEECCCTTSCTTCEEEEEEETTEEEEE--ESSSCEEETTEEES---EEEECGGGCBTTEEE
T ss_pred cEEeecCcEEEEcCC-CCCcEEECCcccccceEEEEecCCceEEEE--eccCcEEECCEEee---eEEccCCcccccEEE
Confidence 466777889999999 899999999999999999998765555533 9999 599999993 799999999
Q ss_pred EEECCc
Q 037445 92 IKLGDC 97 (349)
Q Consensus 92 I~LG~s 97 (349)
++||..
T Consensus 88 lrFGnv 93 (102)
T 3uv0_A 88 LRFGNV 93 (102)
T ss_dssp EEETTE
T ss_pred EEecCE
Confidence 899986
No 32
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.26 E-value=1.1e-11 Score=119.96 Aligned_cols=96 Identities=22% Similarity=0.234 Sum_probs=78.6
Q ss_pred CcEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCC---------CcccEEEEEE--CC---EEEEEeCCCCC
Q 037445 4 PGMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGI---------SSKHLIIESV--SG---KWTIQDLDSCN 69 (349)
Q Consensus 4 P~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsV---------SR~HA~I~~~--~g---~~~L~DLgStN 69 (349)
|...|.++..... .+.|. ...++|||+ ..||++++|+.| ||.||.|.+. .. .|+|+| .|+|
T Consensus 9 ~~g~l~~~~~~~~--~~~l~-~~~~~iGR~-~~~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~i~D-~S~n 83 (419)
T 3i6u_A 9 PWARLWALQDGFA--NLECV-NDNYWFGRD-KSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED-HSGN 83 (419)
T ss_dssp CSEEEEECSSSSC--CEEEC-SSEEEEESS-TTSSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCEEEE-CCSS
T ss_pred CceEeeecCCCCC--ceEec-CCCEEecCC-CccCEEECCcccccccccccccccceEEEEEcCCCCceEEEEEE-CCcC
Confidence 5667777665433 67777 578999999 899999999876 9999999764 22 399999 7999
Q ss_pred ceEEcCeecCCCCcEEecCCCEEEECCcceEEEEE
Q 037445 70 GTFLNSTTLPPNTPFDLRENDTIKLGDCTTISVQM 104 (349)
Q Consensus 70 GTfVNG~rI~~~~~v~L~~GD~I~LG~st~~~v~f 104 (349)
|||||+..+..+....|.+||.|.||.+....+.+
T Consensus 84 Gt~vn~~~~~~~~~~~l~~~d~i~~~~~~~~~~~~ 118 (419)
T 3i6u_A 84 GTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVF 118 (419)
T ss_dssp CEEETTEECCTTCEEECCTTEEEEESSTTCEEEEE
T ss_pred CceECcccccCCCcccCCCCCEeeeeccccceEEE
Confidence 99999999999889999999999999986544434
No 33
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.20 E-value=1.3e-10 Score=96.03 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=76.2
Q ss_pred cEEEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--CCEEEEEeCCCCCceEEcCeecCCCC
Q 037445 5 GMKLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTLPPNT 82 (349)
Q Consensus 5 ~l~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~rI~~~~ 82 (349)
.++|+-.++. ...+.|..+..++|||+ +.+.| .|..+||.|+.|..+ .+.+.|.+++ +|++||||+++.++.
T Consensus 4 ~c~L~~~~~~--~~~I~L~~g~~v~iGR~-p~t~I--~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng~~l~k~~ 77 (102)
T 3kt9_A 4 VCWLVRQDSR--HQRIRLPHLEAVVIGRG-PETKI--TDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDSVVIGKDQ 77 (102)
T ss_dssp EEEEEETTST--TCEEECCBTCEEEECSS-TTTCC--CCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETTEECCBTC
T ss_pred eEEEEecCCC--CCcEEcCCCCcEEeccC-Ccccc--ccCcccCcceEEEEecCCCEEEEEECc-CCCCeECCEEcCCCC
Confidence 4566666643 45899988988999999 67755 699999999999998 4578999995 899999999999999
Q ss_pred cEEecCCCEEEECCcceEE
Q 037445 83 PFDLRENDTIKLGDCTTIS 101 (349)
Q Consensus 83 ~v~L~~GD~I~LG~st~~~ 101 (349)
.+.|++||.|.|-.....|
T Consensus 78 ~~~L~~GD~l~Ll~~~~~~ 96 (102)
T 3kt9_A 78 EVKLQPGQVLHMVNELYPY 96 (102)
T ss_dssp EEEECTTCCEEEETTEEEE
T ss_pred eEEeCCCCEEEEccCCceE
Confidence 9999999999998764333
No 34
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.95 E-value=6.4e-09 Score=93.46 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=71.0
Q ss_pred EEEEEEeCC--CCCe-EEEecCCCeEEEcCCC--CCCCEEeCCCCCCcccEEEEEEC-----CEEEEEeCCCCCceEEcC
Q 037445 6 MKLIMVRGP--RSGE-TIEFKPGSKIRIGRIV--RGNDVTIKDDGISSKHLIIESVS-----GKWTIQDLDSCNGTFLNS 75 (349)
Q Consensus 6 l~L~Vi~Gp--~~G~-~~~L~~g~~~tIGR~~--~~cDIvL~DpsVSR~HA~I~~~~-----g~~~L~DLgStNGTfVNG 75 (349)
.+|+-++.+ ..+. .|.|.. ...+|||.. ..|||+|..+.|++.||.|.... +-++|.+. +.+.|||||
T Consensus 69 PhLvnLn~Dp~ls~~l~y~L~~-g~t~VGr~~~~~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~VNG 146 (184)
T 4egx_A 69 PHLVNLNEDPLMSECLLYYIKD-GITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTYVNG 146 (184)
T ss_dssp CEEEECCCCTTCSSCSEEECCS-EEEEEECSSSSSCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEEETT
T ss_pred ceEEeccCCcccCceEEEEECC-CcCcCCCCCcCCCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEEEcC
Confidence 355555543 2333 566664 468999963 35899999999999999999864 35778886 557899999
Q ss_pred eecCCCCcEEecCCCEEEECCcceEEEEEE
Q 037445 76 TTLPPNTPFDLRENDTIKLGDCTTISVQMI 105 (349)
Q Consensus 76 ~rI~~~~~v~L~~GD~I~LG~st~~~v~f~ 105 (349)
.+|.. ++.|++||.|.||.+. +|+|.
T Consensus 147 ~~I~~--~~~L~~GDrI~lG~~h--~Frfn 172 (184)
T 4egx_A 147 KKVTE--PSILRSGNRIIMGKSH--VFRFN 172 (184)
T ss_dssp EECCS--CEECCTTCEEEETTTE--EEEEE
T ss_pred EEccc--cEEcCCCCEEEECCCC--EEEEC
Confidence 99974 8999999999999874 34453
No 35
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.86 E-value=2.1e-09 Score=99.69 Aligned_cols=68 Identities=16% Similarity=0.102 Sum_probs=58.0
Q ss_pred CCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--C--CEEEEEeCCCCCce-EEcCeecCCCCcEEec-CCCEEEECCcc
Q 037445 25 GSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--S--GKWTIQDLDSCNGT-FLNSTTLPPNTPFDLR-ENDTIKLGDCT 98 (349)
Q Consensus 25 g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~--g~~~L~DLgStNGT-fVNG~rI~~~~~v~L~-~GD~I~LG~st 98 (349)
+..++|||+ +.|||+|+++ + ||.+... . +.|+|+|++|+||| ||||+++.. ...|+ .||.|.||+..
T Consensus 91 ~~~itIG~~-~~~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~~i~~--~~~L~~~GD~I~ig~~~ 163 (238)
T 1wv3_A 91 QDTMTIGPN-AYDDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYELQEQ--LTNKAYIGDHIYVEGIW 163 (238)
T ss_dssp CSEEEEESS-TTSSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTEECCS--SEEEEETTCEEEETTEE
T ss_pred CceEEEeCC-CCCeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCEEecc--ceeccCCcCEEEECCEE
Confidence 348999999 8999999988 3 6877666 2 58999999999996 999999974 67899 99999999874
Q ss_pred e
Q 037445 99 T 99 (349)
Q Consensus 99 ~ 99 (349)
+
T Consensus 164 ~ 164 (238)
T 1wv3_A 164 L 164 (238)
T ss_dssp E
T ss_pred E
Confidence 3
No 36
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=98.83 E-value=1.1e-08 Score=85.66 Aligned_cols=88 Identities=19% Similarity=0.210 Sum_probs=69.4
Q ss_pred CCcEEEEEEeCCCCCeEEEec-CCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--CCEEEEEeCCCCCceEEcCeecC
Q 037445 3 PPGMKLIMVRGPRSGETIEFK-PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTLP 79 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~-~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~rI~ 79 (349)
|-.++|+-.++... .+.|. ....++|||+ +.. .|.|..+||.|+.|..+ ++.+.|.++ ++|++++||.++.
T Consensus 7 ~~~c~L~~~~~~~~--~I~Lp~~~g~~viGR~-p~t--~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~vng~~l~ 80 (110)
T 2brf_A 7 PGRLWLESPPGEAP--PIFLPSDGQALVLGRG-PLT--QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPSTTGTQELK 80 (110)
T ss_dssp -CEEEEECSTTSSC--CEECCSTTCCEEECSB-TTT--TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEEC-CBCC
T ss_pred CcEEEEEeCCCCCC--cEEeccCCCCEEEcCC-CCc--ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcEECCEEcC
Confidence 33457766665533 78884 3457899999 544 46899999999999986 468889999 5699999999999
Q ss_pred CCCcEEecCCCEEEECC
Q 037445 80 PNTPFDLRENDTIKLGD 96 (349)
Q Consensus 80 ~~~~v~L~~GD~I~LG~ 96 (349)
++..+.|++||.|.|=.
T Consensus 81 k~~~~~L~~GD~leLl~ 97 (110)
T 2brf_A 81 PGLEGSLGVGDTLYLVN 97 (110)
T ss_dssp TTCEEEEETTCEEEEET
T ss_pred CCCEEEecCCCEEEEcc
Confidence 99999999999999833
No 37
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.81 E-value=2.9e-08 Score=86.59 Aligned_cols=88 Identities=18% Similarity=0.175 Sum_probs=71.8
Q ss_pred CCcEEEEEEeCCCCCeEEEec-CCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--CCEEEEEeCCCCCceEEcCeecC
Q 037445 3 PPGMKLIMVRGPRSGETIEFK-PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTLP 79 (349)
Q Consensus 3 PP~l~L~Vi~Gp~~G~~~~L~-~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~rI~ 79 (349)
+..++|+-+.+... .+.|. ....++|||+ +.. .|.|..+||.|+.|..+ .+.+.|.++ ++|++||||.++.
T Consensus 7 ~~~c~L~p~d~~~~--~I~Lp~~~g~vvIGRg-Pet--~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~vng~~L~ 80 (143)
T 1yj5_C 7 RGRLWLQSPTGGPP--PIFLPSDGQALVLGRG-PLT--QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGVHELK 80 (143)
T ss_dssp CEEEEEECCTTSCC--CEECCTTTCEEEECSB-TTT--TBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEETTEECC
T ss_pred CCeEEEEecCCCCC--cEEeccCCCCEEEcCC-Ccc--ccccccccceeEEEEEecCCCeEEEEEc-ccCCcEECCEEec
Confidence 45667877776543 67784 3568999999 544 57899999999999986 467889999 5699999999999
Q ss_pred CCCcEEecCCCEEEECC
Q 037445 80 PNTPFDLRENDTIKLGD 96 (349)
Q Consensus 80 ~~~~v~L~~GD~I~LG~ 96 (349)
++..+.|++||.|.|=.
T Consensus 81 k~~~~~L~~GD~LeLl~ 97 (143)
T 1yj5_C 81 PGLSGSLSLGDVLYLVN 97 (143)
T ss_dssp TTCEEEECTTCEEESSS
T ss_pred CCCEEEecCCCEEEEec
Confidence 99999999999998633
No 38
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.64 E-value=2.2e-08 Score=85.01 Aligned_cols=90 Identities=19% Similarity=0.183 Sum_probs=71.1
Q ss_pred CcEEEEEEeCCCCCeEEEec-CCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEE--CCEEEEEeCCCCCceEEcCeecCC
Q 037445 4 PGMKLIMVRGPRSGETIEFK-PGSKIRIGRIVRGNDVTIKDDGISSKHLIIESV--SGKWTIQDLDSCNGTFLNSTTLPP 80 (349)
Q Consensus 4 P~l~L~Vi~Gp~~G~~~~L~-~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~--~g~~~L~DLgStNGTfVNG~rI~~ 80 (349)
..++|.-.++... .+.|. ....++|||+ +.. .|.|..+||+|+.|..+ .+.+.|.++ ++|+++|||.++.+
T Consensus 15 ~~c~L~~~~~~~~--~I~Lp~~~g~~viGRg-p~t--~I~DkrcSR~qv~L~ad~~~~~v~vk~l-G~NP~~vng~~l~k 88 (119)
T 1ujx_A 15 GRLWLQSPTGGPP--PIFLPSDGQALVLGRG-PLT--QVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTVGVQELKP 88 (119)
T ss_dssp CCEEEECCSSSCC--CCCCCTTSCCEEESBB-TTT--TBCCTTSCTTSEEEEEETTTTEEEEEEC-SSSCCBSSSSBCCT
T ss_pred ceEEEEeCCCCCC--cEEeccCCCCEEEcCC-CCc--ccccccccceeEEEEEecCCCEEEEEEc-ccCCcEECCEEecC
Confidence 4567777666533 56674 3457899999 544 56899999999999986 468889999 55999999999999
Q ss_pred CCcEEecCCCEEEE--CCcce
Q 037445 81 NTPFDLRENDTIKL--GDCTT 99 (349)
Q Consensus 81 ~~~v~L~~GD~I~L--G~st~ 99 (349)
+..+.|++||.|.| |.+.+
T Consensus 89 ~~~~~L~~GD~l~Ll~g~y~~ 109 (119)
T 1ujx_A 89 GLSGSLSLGDVLYLVNGLYPL 109 (119)
T ss_dssp TCEEEEETTCCCBCBTTBSCC
T ss_pred CCEEEecCCCEEEEecCCeEE
Confidence 99999999999985 54433
No 39
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=96.33 E-value=0.022 Score=52.47 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=38.1
Q ss_pred EEEEEeCCCCCeEEEecCCCeEEEcCCCCCCCEEeCCCCCCcccEEEEEEC-CEEEE
Q 037445 7 KLIMVRGPRSGETIEFKPGSKIRIGRIVRGNDVTIKDDGISSKHLIIESVS-GKWTI 62 (349)
Q Consensus 7 ~L~Vi~Gp~~G~~~~L~~g~~~tIGR~~~~cDIvL~DpsVSR~HA~I~~~~-g~~~L 62 (349)
.|.+..+. .-..+.|.....++||.. ..|+|.|++. ..|+.|.+.+ +.|.|
T Consensus 3 ~l~i~y~~-~~~~~~L~~~~~~tiG~~-~~~~itl~~~---~~~i~l~~~~~~~~~v 54 (238)
T 1wv3_A 3 KLIIKYNK-QLKMLNLRDGKTYTISED-ERADITLKSL---GEVIHLEQNNQGTWQA 54 (238)
T ss_dssp EEEEEETT-EEEEEECCTTCCEEEESC-TTSSEECTTC---CCCEEEEECTTSCEEE
T ss_pred EEEEEECC-EEEEEecCCCcEEEECCC-ccceEEecCC---CccEEEEEccCCeEEE
Confidence 35555533 334566665678999999 8999999877 7889999877 67776
No 40
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=91.34 E-value=0.68 Score=36.84 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=49.6
Q ss_pred eEEEecCCcceeeEEeeec-CCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEeeee
Q 037445 205 KITKKGRGRSKDLQEMPLD-GGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGAR 280 (349)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (349)
.|......-+..-..|-++ ++.|+|..-.+.....|||+.|.....|++||+ |++.+ .+|.|..+
T Consensus 37 di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~vng~~i~~~~~L~~Gd~------i~~G~-----~~~~~~~~ 102 (106)
T 3gqs_A 37 DIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIVEGRKIEHQSTLSANQV------VALGT-----TLFLLVDY 102 (106)
T ss_dssp SEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEETTEECSSEEECCTTCC------EEETT-----EEEEEEEE
T ss_pred CEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEECCEECCCCeECCCCCE------EEECC-----EEEEEEcc
Confidence 3333344445556667777 788999987777778899999998889999999 99998 77777544
No 41
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=89.70 E-value=0.89 Score=35.68 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=47.2
Q ss_pred eeEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEee
Q 037445 204 SKITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAG 278 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (349)
..|......-+..-..|-++++.|+|..-.+.....|||..++ +..|++||. |.+.. .+|+|-
T Consensus 33 ~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-~~~L~~gd~------i~iG~-----~~~~~~ 95 (100)
T 3po8_A 33 AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ-EWQLADGDV------IRLGH-----SEIIVR 95 (100)
T ss_dssp CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTEECS-EEECCTTCE------EEETT-----EEEEEE
T ss_pred CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCEECc-eEECCCCCE------EEECC-----EEEEEE
Confidence 3344444445555666778899999998777777899999998 788999999 99988 555553
No 42
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=88.88 E-value=0.62 Score=38.29 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=47.8
Q ss_pred EEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEee
Q 037445 206 ITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAG 278 (349)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (349)
|.+....-+..-..|-++++.|+|..-.+.....|||..|.....|++||+ |.+.+ .+|+|.
T Consensus 45 i~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~~i~~~~~L~~Gd~------i~iG~-----~~~~~~ 106 (128)
T 1r21_A 45 IRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRLKHGDV------ITIID-----RSFRYE 106 (128)
T ss_dssp EECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTEECSSCEECCTTEE------EECSS-----CEEEEE
T ss_pred EEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCEECCCcEEcCCCCE------EEECC-----EEEEEE
Confidence 333344445555667778899999988777778999999998789999999 99987 566664
No 43
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=88.11 E-value=1.2 Score=35.91 Aligned_cols=61 Identities=25% Similarity=0.258 Sum_probs=46.5
Q ss_pred EEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEee
Q 037445 206 ITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAG 278 (349)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (349)
|.+....-+..-.+|-++++.|+|..-.+..-..|||..|. ...|++||. |.+.. .+|.|.
T Consensus 43 i~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~-~~~L~~gd~------i~iG~-----~~l~~~ 103 (115)
T 2xt9_B 43 IFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVD-SAVLANGDE------VQIGK-----FRLVFL 103 (115)
T ss_dssp EECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEETTEECS-EEEECTTCE------EEETT-----EEEEEE
T ss_pred EEeCCcccChhheEEEEECCEEEEEECCCCCCeEECCEEcc-eEECCCCCE------EEECC-----EEEEEE
Confidence 33333444555566677899999998877777889999998 789999999 99987 666664
No 44
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=86.54 E-value=0.88 Score=37.10 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=45.4
Q ss_pred eEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecC
Q 037445 205 KITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (349)
.|.+.+.+-+..-.+|-++++.|+|....+.....|||+.|.....|++||. |.+..
T Consensus 49 di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~~i~~~~~L~~GD~------I~iG~ 105 (120)
T 1wln_A 49 SIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRISETTMLQSGMR------LQFGT 105 (120)
T ss_dssp CCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSCBCSSCEEECTTCE------EEETT
T ss_pred cEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCEEcCCCEECCCCCE------EEECC
Confidence 3444445555555666678999999998888889999999998779999999 88876
No 45
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=85.53 E-value=1.2 Score=37.91 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=43.9
Q ss_pred CCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEee
Q 037445 211 RGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAG 278 (349)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (349)
..-+..-..|-++++.|+|..-.+..-..|||..|. ...|++||+ |++.. .+|+|.
T Consensus 83 ~~VSr~Ha~I~~~~~~~~l~DlgS~NGT~VNg~~i~-~~~L~~GD~------I~iG~-----~~l~f~ 138 (143)
T 2kb3_A 83 VTVSRRHAEFRINEGEFEVVDVGSLNGTYVNREPRN-AQVMQTGDE------IQIGK-----FRLVFL 138 (143)
T ss_dssp SSCCSSSEEEEEETTEEEEEESCCSSCCEETTEECS-EEECCTTEE------EEETT-----EEEEEE
T ss_pred CCcChhhEEEEEECCEEEEEECCCcCCeEECCEEcc-eEECCCCCE------EEECC-----EEEEEE
Confidence 334444556666899999998777777789999998 689999999 99988 666664
No 46
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=84.15 E-value=1.3 Score=35.67 Aligned_cols=52 Identities=15% Similarity=0.150 Sum_probs=41.3
Q ss_pred cCCcceeeEEeeecCCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecC
Q 037445 210 GRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 267 (349)
...-+..-.+|-++++.|+|....+..-..|||+.+.. ...|++||+ |.+..
T Consensus 50 d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng~~l~~~~~~~L~~gd~------i~lG~ 103 (118)
T 1uht_A 50 DAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSNALDPETSVNLGDGDV------IKLGE 103 (118)
T ss_dssp SSSSCTTCEEEEECSSSEEEECCCCSSCCEESSSBCCTTCEEECCTTEE------EEETT
T ss_pred CCCCchHHeEEEEECCEEEEEECCCCCCeEECCEECCCCCeEEcCCCCE------EEECC
Confidence 33344455566678899999988777778899999986 678999999 99988
No 47
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=83.54 E-value=1.8 Score=37.77 Aligned_cols=63 Identities=21% Similarity=0.187 Sum_probs=48.4
Q ss_pred eEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEeee
Q 037445 205 KITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGA 279 (349)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (349)
.|.+....-+..-..|-++++.|+|..-.+..-..|||+.|. ...|++||+ |++.. ..|+|..
T Consensus 86 di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VNg~~i~-~~~L~~GD~------I~iG~-----~~l~f~~ 148 (162)
T 2kfu_A 86 DIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVD-SAVLANGDE------VQIGK-----FRLVFLT 148 (162)
T ss_dssp SEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEETTBCCS-EEECCSSCE------EEETT-----EEEEEEC
T ss_pred CEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEECCEEcc-eEECCCCCE------EEECC-----EEEEEEe
Confidence 344444444555667777899999998877778899999998 689999999 99988 6666653
No 48
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=82.40 E-value=2.8 Score=36.54 Aligned_cols=55 Identities=16% Similarity=0.213 Sum_probs=43.4
Q ss_pred CCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEe
Q 037445 211 RGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIA 277 (349)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (349)
..-+..-++|-++++.|+|..-.+.....|||+.|. +..|++||+ |.+.. .+|+|
T Consensus 102 ~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~~i~-~~~L~~GD~------I~lG~-----~~l~f 156 (157)
T 3oun_A 102 TGVSRRHLEIRWDGQVALLADLNSTNGTTVNNAPVQ-EWQLADGDV------IRLGH-----SEIIV 156 (157)
T ss_dssp TTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECS-EEECCTTCE------EEETT-----EEEEE
T ss_pred CCcChhHEEEEEECCEEEEEECCCCCCeEECCEECc-eEECCCCCE------EEECC-----EEEEE
Confidence 344444556667889999998877778899999997 788999999 99988 66665
No 49
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=81.26 E-value=7 Score=32.51 Aligned_cols=57 Identities=16% Similarity=0.174 Sum_probs=43.7
Q ss_pred eeEEEecCCcceeeEEeee-cCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecC
Q 037445 204 SKITKKGRGRSKDLQEMPL-DGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (349)
..|.+.+.+-+.--..|-+ .++.|+|..-. .-...|||+.|.+...|++||. |.+..
T Consensus 58 ~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG~~V~~~~~L~~GD~------I~lG~ 115 (124)
T 3fm8_A 58 QDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNGSSVSSPIQLHHGDR------ILWGN 115 (124)
T ss_dssp CSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETTEECCSCEEECTTCE------EEETT
T ss_pred CCEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECCEEcCCcEECCCCCE------EEECC
Confidence 5566666666555555655 47888888765 4579999999999999999999 88875
No 50
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=78.68 E-value=3.4 Score=39.75 Aligned_cols=64 Identities=9% Similarity=0.087 Sum_probs=49.2
Q ss_pred eEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEeee
Q 037445 205 KITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGA 279 (349)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (349)
.|......-+..-..|-++++.|+|..-.+.....|||..|.....|++||+ |.+.+ .+++|..
T Consensus 317 di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~~i~~~~~L~~gd~------i~~G~-----~~~~~~~ 380 (388)
T 2ff4_A 317 DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHERIRSAVTLNDGDH------IRICD-----HEFTFQI 380 (388)
T ss_dssp SEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTEECSSEEEECTTCE------EEETT-----EEEEEEC
T ss_pred eEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCEECCCceECCCCCE------EEECC-----EEEEEEe
Confidence 3333444445555677779999999987666677899999988899999999 99988 7777643
No 51
>3v4y_B Nuclear inhibitor of protein phosphatase 1; PP1, Ser/Thr phosphatase, NIPP1, IDP, hydrolase; HET: GOL 15P; 2.10A {Homo sapiens}
Probab=77.41 E-value=0.16 Score=38.42 Aligned_cols=48 Identities=8% Similarity=0.019 Sum_probs=28.3
Q ss_pred cCCCCCCcccCCCCCCCccccc----c-ccccccCCcccccCcCCCccchhhhc
Q 037445 115 AKPKRNPRRQANVPGTSSVRAT----S-GRKKAEAEPVETLGLEGGQIEDQSRI 163 (349)
Q Consensus 115 ~~lt~~~~~~~~~~~~spV~as----s-~RKk~kaepve~lg~e~g~~e~e~~~ 163 (349)
..++.++++..++....++.++ + .++|++.. ...|..+..+|+|||+|
T Consensus 10 DnLTEfNTAhNrRIs~l~i~~~~~~~~~~kRKRk~~-~V~F~eeeeIINPEDVD 62 (62)
T 3v4y_B 10 DNLTEFNTAHNKRISTLTIEEGNLDIQRPKRKRKNS-RVTFSEDDEIINPEDVD 62 (62)
T ss_dssp HHHHHHHHHHHTCCCSCCCCC--------------C-CCEECSCCEESCCCC--
T ss_pred chhhhhhhhhcceeeeeeecCCcccccccccccccC-ccccCCcccccCcccCC
Confidence 3566677777777777666444 1 12222222 57999999999999986
No 52
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=74.31 E-value=5 Score=33.52 Aligned_cols=60 Identities=7% Similarity=-0.028 Sum_probs=42.1
Q ss_pred ecCCcceeeEEeeec--CCceEEeeccCCceeEEeeEEe----ccccccCCCCcccceeeEEecCceeeeEEEEeee
Q 037445 209 KGRGRSKDLQEMPLD--GGKVKIESEENLEPLEVLGVQV----DGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGA 279 (349)
Q Consensus 209 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (349)
....-+..-++|-++ ++.|+|..-.+.....|||..| .....|++||+ |++.+ ++|.|-.
T Consensus 60 ~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~~i~l~~~~~~~L~~GD~------I~lG~-----~~l~f~~ 125 (132)
T 3va4_A 60 PFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKPPRVLPPGVSHRLRDQEL------ILFAD-----FPCQYHR 125 (132)
T ss_dssp CCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTTTEEECTTCCEECCTTCE------EEETT-----EEEEEEE
T ss_pred CCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCEEcccCCCCEEECCCCCE------EEECC-----EEEEEEE
Confidence 333344445566665 6889998877766778888875 24467999999 99998 7776643
No 53
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=70.26 E-value=6.7 Score=32.64 Aligned_cols=60 Identities=10% Similarity=0.028 Sum_probs=44.3
Q ss_pred EecCCcceeeEEeeecCC--ceEEeeccCCceeEEeeEEecc----------ccccCCCCcccceeeEEecCceeeeEEE
Q 037445 208 KKGRGRSKDLQEMPLDGG--KVKIESEENLEPLEVLGVQVDG----------KENFRPGKETSKKCQVQVDGKEKTNVTL 275 (349)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (349)
+....-+..-.+|-++++ .|+|..-.+..-..|||+.+.. ...|++||+ |.+.. .+|
T Consensus 46 l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~vNg~~i~~~~~~~~~~~~~~~L~~GD~------I~iG~-----~~~ 114 (139)
T 1mzk_A 46 LKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDI------ITLGT-----TTK 114 (139)
T ss_dssp CCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEESSCCCTTTCCCCCCEECCTTEE------EECSS-----SCE
T ss_pred eCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEECCEECcCcccccccCCceEECCCCCE------EEECC-----EEE
Confidence 333344555566666664 6999988777778999999985 688999999 99987 555
Q ss_pred Eee
Q 037445 276 IAG 278 (349)
Q Consensus 276 ~~~ 278 (349)
+|.
T Consensus 115 ~~~ 117 (139)
T 1mzk_A 115 VYV 117 (139)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 54
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=69.77 E-value=7.5 Score=31.99 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=52.0
Q ss_pred eeeccccceeeccCccccceeeEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeE
Q 037445 184 VQVESKENLELEEGGEIESESKITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQV 263 (349)
Q Consensus 184 ~~~~~~e~~~~~eg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (349)
+....+=.|+...+ ..+.+..--=++.-++|-+...++++-.+-|+ -+-|||.-| |-..+.+||.
T Consensus 17 l~~~~~~rIGR~~~------~~l~LddpsVs~~HAti~~~~~G~~~l~S~nG-tVFVNGqrv-~~~~I~~gDt------- 81 (102)
T 3uv0_A 17 LKADTIYRIGRQKG------LEISIADESMELAHATACILRRGVVRLAALVG-KIFVNDQEE-TVVDIGMENA------- 81 (102)
T ss_dssp CCTTCCEEEESSTT------STEECCCTTSCTTCEEEEEEETTEEEEEESSS-CEEETTEEE-SEEEECGGGC-------
T ss_pred eecCcEEEEcCCCC------CcEEECCcccccceEEEEecCCceEEEEeccC-cEEECCEEe-eeEEccCCcc-------
Confidence 33444455666766 44444444445555666444444444443333 388999999 9999999999
Q ss_pred EecCceeeeEEEEeeeeecccccc
Q 037445 264 QVDGKEKTNVTLIAGARVTRSRMN 287 (349)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~ 287 (349)
+||+ |.|+||-=-..-|+|
T Consensus 82 -I~g~----v~lrFGnvea~l~~~ 100 (102)
T 3uv0_A 82 -VAGK----VKLRFGNVEARLEFG 100 (102)
T ss_dssp -BTTE----EEEEETTEEEEEEEC
T ss_pred -cccE----EEEEecCEEEEEEec
Confidence 7885 888887544444443
No 55
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=68.69 E-value=7.8 Score=32.68 Aligned_cols=38 Identities=5% Similarity=0.071 Sum_probs=33.1
Q ss_pred cCCceEEeeccCCceeEEeeEEecc-ccccCCCCcccceeeEEecC
Q 037445 223 DGGKVKIESEENLEPLEVLGVQVDG-KENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (349)
+++.|+|..- +..-..|||+.|.. ...|++||+ |.+..
T Consensus 75 ~~~~~~l~Dl-S~NGT~VNg~~i~~~~~~L~~GD~------I~lG~ 113 (151)
T 2jqj_A 75 QRNLINVIDK-SRNGTFINGNRLVKKDYILKNGDR------IVFGK 113 (151)
T ss_dssp EEEEEEEEEC-CSSCEEETTEECCSSCEEECSSEE------EEETT
T ss_pred cCCEEEEEEC-CCCCeEECCEEcCCCceECCCCCE------EEECC
Confidence 5788999888 88888999999987 588999999 88877
No 56
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=64.15 E-value=12 Score=30.50 Aligned_cols=59 Identities=15% Similarity=0.181 Sum_probs=42.8
Q ss_pred cceeeEEeee-cCCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecCce-eeeEEEEee
Q 037445 213 RSKDLQEMPL-DGGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDGKE-KTNVTLIAG 278 (349)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 278 (349)
-+..-..|-+ .++.|+|... +.....|||..+.. ...|++||+ |.+.... ...++++|-
T Consensus 56 vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~~l~~~~~~~L~~Gd~------I~lG~~~~~~~i~f~~~ 118 (127)
T 1g6g_A 56 LSNKHFQILLGEDGNLLLNDI-STNGTWLNGQKVEKNSNQLLSQGDE------ITVGVGVESDILSLVIF 118 (127)
T ss_dssp SCSSCEEEEECTTSCEEEEEC-CSSCCEETTEECCTTCCEECCTTCE------EEECTTSGGGCEEEEEE
T ss_pred CChhHeEEEECCCCcEEEEEC-CcCCeEECCEEcCCCCeEEcCCCCE------EEECCCccCceEEEEEE
Confidence 3444455666 4788999988 88888999999986 578999999 8887643 334555553
No 57
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=62.51 E-value=20 Score=30.50 Aligned_cols=58 Identities=16% Similarity=0.072 Sum_probs=40.5
Q ss_pred eeEEEecCCcceeeEEeeecCC----ceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecC
Q 037445 204 SKITKKGRGRSKDLQEMPLDGG----KVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (349)
..|.+.+-+-+.--..|-+++. .+++..-.+.-...|||..|.....|++||. |.+..
T Consensus 74 ~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~VNG~~i~~~~~L~~GD~------I~~G~ 135 (154)
T 4ejq_A 74 QDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNR------IIMGK 135 (154)
T ss_dssp CSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEEETTEECCSCEECCTTCE------EEETT
T ss_pred CCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceEECCEEcCCceECCCCCE------EEECC
Confidence 4466666555444444545443 3566555566679999999999899999999 88865
No 58
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=60.84 E-value=3.4 Score=34.44 Aligned_cols=47 Identities=4% Similarity=-0.002 Sum_probs=36.2
Q ss_pred eeeEEeeecC--CceEEeeccCCceeEEeeEEec--cccccCCCCcccceeeEEecC
Q 037445 215 KDLQEMPLDG--GKVKIESEENLEPLEVLGVQVD--GKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 215 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (349)
.--.+|-+++ +.|+|..-.+..-..|||..|. ....|++||+ |.+..
T Consensus 77 r~Ha~i~~~~~~~~~~l~Dl~S~NGT~vNg~~l~~~~~~~L~~gd~------i~~G~ 127 (140)
T 2jpe_A 77 RVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDST------VSFGA 127 (140)
T ss_dssp TTSBEEEEBSSSCCEEEECCSCSSCEESSSCEECSSSCCEECTTCC------BBCSS
T ss_pred hhheEEEEECCCCcEEEEECCCCCCeEECCEECCCCccEECCCCCE------EEECC
Confidence 3334555665 8899998666667789999998 6788999999 88876
No 59
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=58.62 E-value=9.4 Score=30.41 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=40.5
Q ss_pred ceeeEEeeec--CCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecCce---eeeEEEEe
Q 037445 214 SKDLQEMPLD--GGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDGKE---KTNVTLIA 277 (349)
Q Consensus 214 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 277 (349)
+..-..|-++ ++.|+|.. .+.....|||..|.. ...|++||+ |.+.... ..+++++|
T Consensus 45 Sr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~~l~~~~~~~L~~GD~------i~~G~~~~~~~~~~~f~f 108 (116)
T 1lgp_A 45 SGDHCRIVVDEKSGQVTLED-TSTSGTVINKLKVVKKQTCPLQTGDV------IYLVYRKNEPEHNVAYLY 108 (116)
T ss_dssp CTTCEEEEECTTTCCEEEEE-CSSSCCCCCCCCCCCSSCCCCCTTCE------EEEECCSSCGGGCEEEEC
T ss_pred ChhHeEEEEECCCCeEEEEE-CCcCCcEECCEEcCCCCcEECCCCCE------EEEeccCCCCCceEEEEE
Confidence 3344455554 78899988 777788999999985 578999999 8887621 11566665
No 60
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=57.32 E-value=32 Score=29.37 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=44.0
Q ss_pred cceeeEEeeec-CCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecCce-eeeEEEEeee
Q 037445 213 RSKDLQEMPLD-GGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDGKE-KTNVTLIAGA 279 (349)
Q Consensus 213 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 279 (349)
-+..-..|-++ ++.|+|... +..-..|||..|.. ...|++||+ |.+.... .+.++++|..
T Consensus 84 vSr~Ha~I~~~~~g~~~l~Dl-S~NGT~vNg~~i~~~~~~~L~~GD~------I~iG~~~~~~~~~f~~~~ 147 (164)
T 1g3g_A 84 LSNKHFQILLGEDGNLLLNDI-STNGTWLNGQKVEKNSNQLLSQGDE------ITVGVGVESDILSLVIFI 147 (164)
T ss_dssp TTSSCEEEEECSTTCEEEEEC-CSSCEEETTEEECTTEEEECCTTCE------EEESCSSTTSCEEEEEEE
T ss_pred cChhHEEEEECCCCCEEEEEC-CCCCeEECCEEcCCCCceEcCCCCE------EEECCCCCCCcEEEEEEe
Confidence 44555566664 888999988 88888999999987 588999999 8887632 2345555543
No 61
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=55.73 E-value=23 Score=29.21 Aligned_cols=49 Identities=12% Similarity=0.128 Sum_probs=38.4
Q ss_pred cceeeEEeee-cCCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecC
Q 037445 213 RSKDLQEMPL-DGGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 267 (349)
-+.--..|-+ +++.|+|....+..-..|||..|.. ...|++||+ |.+..
T Consensus 51 VSr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~l~~~~~~~L~~GD~------I~lG~ 102 (138)
T 2pie_A 51 ISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDY------IQLGV 102 (138)
T ss_dssp SCSSCEEEEECTTSCEEEEECSCSSCEEETTEECCTTCCEECCTTCE------EEESC
T ss_pred CChhHeEEEEcCCCcEEEEECCCCCCeEECCEEcCCCCcEECCCCCE------EEECC
Confidence 3444455666 5788999987777778999999987 588999999 88866
No 62
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=49.70 E-value=22 Score=31.27 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=28.2
Q ss_pred CceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEe
Q 037445 225 GKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQV 265 (349)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (349)
+.|+|..- +..-..|||..|.. ...|++||+ |.+
T Consensus 97 ~~~~l~Dl-StNGT~VNg~ri~~~~~~~L~~GD~------I~l 132 (182)
T 1qu5_A 97 DDIWYCHT-GTNVSYLNNNRMIQGTKFLLQDGDE------IKI 132 (182)
T ss_dssp CEEEECCC-SSSCCEETTEECCSSEEEECCTTBC------CEE
T ss_pred ceEEEEEC-CcCCeEECCEEcCCCcceEcCCCCE------EEE
Confidence 67888876 66677899999987 578999999 777
No 63
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=48.47 E-value=31 Score=28.46 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=29.0
Q ss_pred ceEEeec-----cCCceeEEeeEEeccccccCCCCcccceeeEEecC
Q 037445 226 KVKIESE-----ENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 226 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (349)
.|+|..- .+.....|||+.|.. ..|++||+ |.+..
T Consensus 67 ~~~l~Dl~~~~~~S~NGT~vNg~~i~~-~~L~~GD~------I~iG~ 106 (131)
T 3hx1_A 67 AYRIIDGDEDGQSSVNGLMINGKKVQE-HIIQTGDE------IVMGP 106 (131)
T ss_dssp CEEEEESCTTSCCCSSCEEETTEEESE-EECCTTCE------EECST
T ss_pred EEEEEECCCCCCCCCCceEECCEEeEe-EECCCCCE------EEECC
Confidence 4888875 456667889999986 88999999 99987
No 64
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=45.72 E-value=18 Score=30.89 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=28.5
Q ss_pred CceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEe
Q 037445 225 GKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQV 265 (349)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (349)
+.|+|..- +..-..|||+.|.. ...|++||+ |.+
T Consensus 73 ~~~~l~Dl-StNGT~VNg~ri~~~~~~~L~~GD~------I~l 108 (158)
T 1dmz_A 73 DDIWYCHT-GTNVSYLNNNRMIQGTKFLLQDGDE------IKI 108 (158)
T ss_dssp EEEEEEEC-STTCCEETTEECCSSEEEECCSSCC------EES
T ss_pred ccEEEEEC-CcCCeEECCEEcCCCceEEcCCCCE------EEE
Confidence 67888776 66777999999987 578999999 888
No 65
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=43.55 E-value=43 Score=29.44 Aligned_cols=57 Identities=18% Similarity=0.133 Sum_probs=38.7
Q ss_pred eeEEEecCCc--ceeeEEeeecC---CceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecC
Q 037445 204 SKITKKGRGR--SKDLQEMPLDG---GKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 204 ~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (349)
..|.+.|-|- --|.++.--++ +.|.+... ..-.+.|||..|.....|+.||. |.+..
T Consensus 104 ~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~VNG~~I~~~~~L~~GDr------I~lG~ 165 (184)
T 4egx_A 104 QDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTYVNGKKVTEPSILRSGNR------IIMGK 165 (184)
T ss_dssp CSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEEETTEECCSCEECCTTCE------EEETT
T ss_pred CeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEEEcCEEccccEEcCCCCE------EEECC
Confidence 4566666554 33555544433 23555544 34579999999999999999999 87765
No 66
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=43.39 E-value=37 Score=28.24 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=36.8
Q ss_pred ceeeEEeee-cCCceEEeeccCCceeEEeeEEecc--ccccCCCCcccceeeEEecC
Q 037445 214 SKDLQEMPL-DGGKVKIESEENLEPLEVLGVQVDG--KENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 214 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 267 (349)
+..-.+|-+ +++.|+|..-.+..-..|||..|.. ...|++||+ |.+..
T Consensus 60 Sr~Ha~i~~~~~g~~~l~Dl~S~NGT~vNg~~i~~~~~~~L~~GD~------I~iG~ 110 (145)
T 2csw_A 60 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDY------IQLGV 110 (145)
T ss_dssp CTTCEEEEECTTSCEEEEBSSCSSCEEESSCBCCBTCCEECCSSCC------EEESC
T ss_pred ChhHeEEEEcCCCeEEEEECCCCCCeEECCEECCCCccEECCCCCE------EEECC
Confidence 344455666 4778999986666677899999987 578999999 88866
No 67
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=42.02 E-value=24 Score=29.17 Aligned_cols=41 Identities=10% Similarity=0.086 Sum_probs=29.8
Q ss_pred eecCCceEEeeccCCceeEEeeEEecccc--ccCCCCcccceeeEEecC
Q 037445 221 PLDGGKVKIESEENLEPLEVLGVQVDGKE--NFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 267 (349)
-..++.|+|..-.+..-..|||+.|.... .|++||+ |.+.+
T Consensus 79 ~~~~~~~~l~Dl~StNGT~vNg~ri~~~~~~~L~~GD~------I~~G~ 121 (130)
T 4h87_A 79 DSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHV------VRFGG 121 (130)
T ss_dssp ----CCEEEEECSCSSCEEETTEECCTTCCEECCTTCE------EEETT
T ss_pred eccCCcceEeeCCCCCceEECCEECCCCceeECCCCCE------EEECC
Confidence 35677888888666666788999997653 6999999 88876
No 68
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=40.22 E-value=8.8 Score=28.85 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=20.3
Q ss_pred eeEEeeEEe-ccccccCCCCcccceeeEEecCce
Q 037445 237 PLEVLGVQV-DGKENFRPGKETSKKCQVQVDGKE 269 (349)
Q Consensus 237 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 269 (349)
.|.|||..+ +....+.+||. |+|+|+.
T Consensus 47 ~V~VNG~~v~~~~~~v~~gd~------I~v~~~~ 74 (79)
T 1p9k_A 47 QVKVDGAVETRKRCKIVAGQT------VSFAGHS 74 (79)
T ss_dssp HHEETTBCCCCSSCCCCSSEE------EEETTEE
T ss_pred EEEECCEEecCCCCCCCCCCE------EEECCEE
Confidence 467788776 56667888887 9999954
No 69
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=37.36 E-value=54 Score=28.04 Aligned_cols=60 Identities=15% Similarity=0.140 Sum_probs=40.4
Q ss_pred ceeeEEeeecCCc----eEEeeccCCceeEEeeEEeccc--cccCCCCcccceeeEEecCce-eeeEEEEeee
Q 037445 214 SKDLQEMPLDGGK----VKIESEENLEPLEVLGVQVDGK--ENFRPGKETSKKCQVQVDGKE-KTNVTLIAGA 279 (349)
Q Consensus 214 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 279 (349)
+..-+.|-++++. |+|..-.+..-..|||..|... ..|++||+ |.+..-. .....|+|.+
T Consensus 91 Sr~HA~I~~~~~~~~~~~~l~Dl~StNGT~VNg~ri~~~~~~~L~~GD~------I~~G~s~~~~~~elvF~~ 157 (158)
T 3els_A 91 SKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPGARYIELRSGDV------LTLSEFEEDNDYELIFMN 157 (158)
T ss_dssp CSSCEEEEEEEETTEEEEEEEECSCSSCCEETTEECCTTCCEECCTTEE------EESSSCGGGCCEEEEEEE
T ss_pred CcccEEEEEEccCCeeEEEEEeCCCCCccEECCEEcCCCceEEcCCCCE------EEECCCCCCCCEEEEEEe
Confidence 3333444445444 8888766666678999999873 67999999 8887533 2357777753
No 70
>3mml_A Allophanate hydrolase subunit 2; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=36.80 E-value=70 Score=30.87 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=32.5
Q ss_pred CCCCceEEcCeecCCCCcEEecCCCEEEECCc---ceEEEEEE
Q 037445 66 DSCNGTFLNSTTLPPNTPFDLRENDTIKLGDC---TTISVQMI 105 (349)
Q Consensus 66 gStNGTfVNG~rI~~~~~v~L~~GD~I~LG~s---t~~~v~f~ 105 (349)
|..-...|||+++.....+.++.||+++||.. .+.|+-+.
T Consensus 78 GA~~~~~ldg~~v~~~~~~~v~~G~~L~~g~~~~G~R~YLAV~ 120 (318)
T 3mml_A 78 GADTDPAVNGIPFGTNSIHHVHDGQVISLGAPHSGLRSYLAVR 120 (318)
T ss_dssp ESCCCCEETTEECCTTSCEEECTTCEEECCCCSSCSEEEEEET
T ss_pred CCCCcceECCEEcCCCeEEEECCCCEEEeCCCCCccEEEEEEc
Confidence 34456789999999999999999999999976 56676554
No 71
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=34.91 E-value=51 Score=27.53 Aligned_cols=35 Identities=14% Similarity=0.019 Sum_probs=28.0
Q ss_pred ceEEeeccCCceeEEeeEEec--cccccCCCCcccceeeEEecC
Q 037445 226 KVKIESEENLEPLEVLGVQVD--GKENFRPGKETSKKCQVQVDG 267 (349)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (349)
.|+|..- +.--..|||..|. ....|++||+ |.+..
T Consensus 94 ~~~i~D~-StNGT~VNg~~i~~~~~~~L~~GD~------I~lG~ 130 (149)
T 1gxc_A 94 IAYIEDH-SGNGTFVNTELVGKGKRRPLNNNSE------IALSL 130 (149)
T ss_dssp EEEEEEC-CSSCEEETTEECCTTCEEECCTTEE------EEESS
T ss_pred EEEEEEC-CCCCeEECCEECCCCCeEECCCCCE------EEECC
Confidence 6888773 5556689999998 5788999999 88876
No 72
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=31.47 E-value=1.3e+02 Score=25.10 Aligned_cols=66 Identities=17% Similarity=0.093 Sum_probs=46.8
Q ss_pred eeEEEecCCcceeeEEeeecCCceEEeeccCCceeEEeeEEeccccccCCCCcccceeeEEecCceeeeEEEEeeeeec
Q 037445 204 SKITKKGRGRSKDLQEMPLDGGKVKIESEENLEPLEVLGVQVDGKENFRPGKETSKKCQVQVDGKEKTNVTLIAGARVT 282 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (349)
+-+-+.-.+-.---.+|-++.+.|.+..++| +..+||+.+--...|+||.. ++|.+ ++|.|+.-.+
T Consensus 35 ~DLvL~D~~Vs~~H~~L~~~~~g~~L~~s~n--gt~vdG~~v~~~~~L~~g~~------l~lG~-----~~l~~~~~~~ 100 (123)
T 4a0e_A 35 SDIVLSDSEIAPVHLVLMVDEEGIRLTDSAE--PLLQEGLPVPLGTLLRAGSC------LEVGF-----LLWTFVAVGQ 100 (123)
T ss_dssp CSEECCCTTSCSSCEEEEEETTEEEEEEESS--CCEETTEECCTTCBCCTTSC------EEETT-----EEEEEEETTS
T ss_pred CCEEEeCCCccceeEEEEECCCeEEEEeccC--CEEECCEEcccccccCCCCE------EEEcc-----EEEEEEcCCC
Confidence 4444444444444455666888999975444 45689998876668999999 99999 9999876443
No 73
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=27.19 E-value=52 Score=24.99 Aligned_cols=27 Identities=7% Similarity=0.155 Sum_probs=22.0
Q ss_pred eEEeeEEeccccccCCCCcccceeeEEecCcee
Q 037445 238 LEVLGVQVDGKENFRPGKETSKKCQVQVDGKEK 270 (349)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (349)
|.|||..+.....+.+||. |.|+..+.
T Consensus 28 V~VNg~~~~~~~~v~~gd~------I~v~~~~~ 54 (92)
T 2k6p_A 28 VWLNGSCAKASKEVKAGDT------ISLHYLKG 54 (92)
T ss_dssp CEETTEECCTTCBCCTTCE------EEECCSSC
T ss_pred EEECCEEcCCCCCcCCCCE------EEEEeCCc
Confidence 8899998887888999998 77776544
No 74
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=26.91 E-value=47 Score=24.09 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=18.6
Q ss_pred ceEEcCeecCCCCcEEecCCCEEEE
Q 037445 70 GTFLNSTTLPPNTPFDLRENDTIKL 94 (349)
Q Consensus 70 GTfVNG~rI~~~~~v~L~~GD~I~L 94 (349)
-..|||+.+.. ...|++||.|.|
T Consensus 48 ~v~vNg~~v~~--~~~L~~gD~V~i 70 (77)
T 2q5w_D 48 QVAVNEEFVQK--SDFIQPNDTVAL 70 (77)
T ss_dssp EEEETTEEECT--TSEECTTCEEEE
T ss_pred EEEECCEECCC--CCCcCCCCEEEE
Confidence 47788888775 479999999877
No 75
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=25.26 E-value=47 Score=25.25 Aligned_cols=26 Identities=23% Similarity=0.336 Sum_probs=20.3
Q ss_pred ceEEcCeecCCCCcEEecCCCEEEECCc
Q 037445 70 GTFLNSTTLPPNTPFDLRENDTIKLGDC 97 (349)
Q Consensus 70 GTfVNG~rI~~~~~v~L~~GD~I~LG~s 97 (349)
..+|||+.+.+ ...|..||.|.|-..
T Consensus 27 ~V~VNg~~~~~--~~~v~~gd~I~v~~~ 52 (92)
T 2k6p_A 27 AVWLNGSCAKA--SKEVKAGDTISLHYL 52 (92)
T ss_dssp CCEETTEECCT--TCBCCTTCEEEECCS
T ss_pred cEEECCEEcCC--CCCcCCCCEEEEEeC
Confidence 48999998754 567899999988543
No 76
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=22.97 E-value=43 Score=28.81 Aligned_cols=21 Identities=19% Similarity=0.018 Sum_probs=19.4
Q ss_pred eeEEEecCCcceeeEEeeecC
Q 037445 204 SKITKKGRGRSKDLQEMPLDG 224 (349)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~ 224 (349)
|.++++|||.+...+.|...+
T Consensus 77 F~v~e~GWGeF~i~I~i~f~~ 97 (140)
T 3qrl_A 77 FRIEEQGWGGFPLDISVFLLE 97 (140)
T ss_dssp CCEEEEESSCCCEEEEEEEGG
T ss_pred cEEEEEEeeeEEEEEEEEEec
Confidence 899999999999999999865
No 77
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=22.46 E-value=97 Score=28.01 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=35.0
Q ss_pred ceEEeeccCCceeEEeeEEeccc--cccCCCCcccceeeEEecCce-eeeEEEEeee
Q 037445 226 KVKIESEENLEPLEVLGVQVDGK--ENFRPGKETSKKCQVQVDGKE-KTNVTLIAGA 279 (349)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 279 (349)
.|+|..-.+..-..|||+.|... ..|++||+ |.+..-. ...+.|+|-+
T Consensus 154 ~~~l~DLgStNGTfVNG~rI~~~~~~~L~~GD~------I~fG~s~r~~~~el~f~~ 204 (205)
T 3elv_A 154 KCYVMDLDSSNGTCLNNVVIPGARYIELRSGDV------LTLSEFEEDNDYELIFMN 204 (205)
T ss_dssp EEEEEECSCSSCCEETTEECCBTSCEECCTTCE------EESSSSGGGCSEEEEEEE
T ss_pred eEEEEeCCCCCCCeECCEECCCCceeECCCCCE------EEECCCCCCCCeEEEEEe
Confidence 48887766666678999999876 47999999 8887644 2346776643
No 78
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=21.14 E-value=47 Score=26.57 Aligned_cols=28 Identities=32% Similarity=0.298 Sum_probs=0.0
Q ss_pred eCCCCCceEEcCeecCCCCcEEecCCCEEEE
Q 037445 64 DLDSCNGTFLNSTTLPPNTPFDLRENDTIKL 94 (349)
Q Consensus 64 DLgStNGTfVNG~rI~~~~~v~L~~GD~I~L 94 (349)
|+ +.+-+.|||+.+.. ...|++||.|.|
T Consensus 55 dl-~~~~V~Vng~~v~~--d~~L~dGDRVEI 82 (97)
T 2hj1_A 55 DL-STNKIGIFSRPIKL--TDVLKEGDRIEI 82 (97)
T ss_dssp CT-TTSEEEEEECSCCT--TCBCCTTCEEEE
T ss_pred cc-cccEEEEcCEECCC--CccCCCCCEEEE
No 79
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=20.22 E-value=69 Score=26.56 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=0.0
Q ss_pred CCceEEcCeecCCCCcEEecCCCEEEE
Q 037445 68 CNGTFLNSTTLPPNTPFDLRENDTIKL 94 (349)
Q Consensus 68 tNGTfVNG~rI~~~~~v~L~~GD~I~L 94 (349)
...++|||+.+.+ ...|..||.|.|
T Consensus 33 ~G~V~VNG~~vk~--s~~V~~GD~I~I 57 (133)
T 1dm9_A 33 GGKVHYNGQRSKP--SKIVELNATLTL 57 (133)
T ss_dssp TTCEEETTEECCT--TCBCCTTCEEEE
T ss_pred CCcEEECCEEcCC--CCEeCCCCEEEE
Done!