Query 037448
Match_columns 118
No_of_seqs 107 out of 1149
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 12:22:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037448.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037448hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03201 GST_C_DHAR GST_C famil 99.8 6.2E-19 1.4E-23 112.2 11.2 106 1-113 14-120 (121)
2 cd03184 GST_C_Omega GST_C fami 99.8 6.6E-19 1.4E-23 112.1 9.8 108 2-114 17-124 (124)
3 cd03190 GST_C_ECM4_like GST_C 99.8 4.7E-18 1E-22 110.8 11.0 112 2-117 20-132 (142)
4 KOG0406 Glutathione S-transfer 99.8 4E-18 8.7E-23 118.1 10.7 111 3-116 113-224 (231)
5 cd03185 GST_C_Tau GST_C family 99.8 1E-17 2.2E-22 106.3 11.8 106 3-113 20-125 (126)
6 cd03198 GST_C_CLIC GST_C famil 99.8 7.6E-18 1.7E-22 108.7 11.1 110 1-112 11-133 (134)
7 TIGR00862 O-ClC intracellular 99.7 4.2E-16 9.1E-21 109.3 11.8 112 2-115 106-232 (236)
8 cd03203 GST_C_Lambda GST_C fam 99.7 1E-15 2.2E-20 97.1 9.0 86 22-111 33-119 (120)
9 cd03186 GST_C_SspA GST_N famil 99.6 7E-15 1.5E-19 91.0 9.8 87 3-100 20-106 (107)
10 cd03188 GST_C_Beta GST_C famil 99.6 5.7E-15 1.2E-19 91.9 8.4 74 16-100 40-113 (114)
11 PF00043 GST_C: Glutathione S- 99.6 9.8E-15 2.1E-19 88.3 9.1 73 14-95 23-95 (95)
12 cd03209 GST_C_Mu GST_C family, 99.6 1.9E-14 4.2E-19 91.1 8.9 78 17-104 33-110 (121)
13 cd03210 GST_C_Pi GST_C family, 99.6 2.5E-14 5.5E-19 91.2 8.3 91 6-103 22-112 (126)
14 cd03196 GST_C_5 GST_C family, 99.6 3.5E-14 7.6E-19 89.4 8.5 77 16-100 38-114 (115)
15 cd03207 GST_C_8 GST_C family, 99.5 5.6E-14 1.2E-18 86.3 8.7 76 14-101 25-100 (103)
16 PLN02817 glutathione dehydroge 99.5 1.3E-13 2.7E-18 98.3 11.0 89 21-114 173-262 (265)
17 cd03187 GST_C_Phi GST_C family 99.5 6.6E-14 1.4E-18 87.6 8.3 78 14-100 40-117 (118)
18 PRK09481 sspA stringent starva 99.5 2E-13 4.3E-18 94.0 10.9 85 13-106 121-205 (211)
19 cd03191 GST_C_Zeta GST_C famil 99.5 1.8E-13 3.9E-18 86.4 9.5 75 20-103 45-119 (121)
20 PF13410 GST_C_2: Glutathione 99.5 1.2E-13 2.5E-18 79.3 7.5 68 15-90 2-69 (69)
21 cd03178 GST_C_Ure2p_like GST_C 99.5 7.7E-14 1.7E-18 86.9 7.1 78 14-101 35-112 (113)
22 cd03183 GST_C_Theta GST_C fami 99.5 2E-13 4.3E-18 86.7 9.0 80 13-101 39-120 (126)
23 PLN02378 glutathione S-transfe 99.5 3.6E-13 7.8E-18 93.0 10.1 90 20-113 119-209 (213)
24 cd03182 GST_C_GTT2_like GST_C 99.5 2.7E-13 5.8E-18 84.9 8.1 74 14-97 44-117 (117)
25 cd03208 GST_C_Alpha GST_C fami 99.5 3.7E-13 8E-18 87.3 8.9 72 23-102 43-114 (137)
26 cd03204 GST_C_GDAP1 GST_C fami 99.5 4.3E-13 9.4E-18 84.1 8.8 81 13-97 23-111 (111)
27 cd03180 GST_C_2 GST_C family, 99.5 4.5E-13 9.7E-18 82.8 8.3 71 16-97 40-110 (110)
28 TIGR01262 maiA maleylacetoacet 99.5 4.9E-13 1.1E-17 91.5 9.2 75 20-103 130-204 (210)
29 cd03177 GST_C_Delta_Epsilon GS 99.5 3.9E-13 8.5E-18 84.6 7.6 76 16-101 35-110 (118)
30 cd03181 GST_C_EFB1gamma GST_C 99.5 4E-13 8.7E-18 84.7 7.6 83 14-104 35-117 (123)
31 PRK10542 glutathionine S-trans 99.4 5.8E-13 1.3E-17 90.6 8.3 73 18-101 123-195 (201)
32 PTZ00057 glutathione s-transfe 99.4 5.7E-13 1.2E-17 91.4 7.6 75 20-102 124-198 (205)
33 cd03189 GST_C_GTT1_like GST_C 99.4 9E-13 1.9E-17 82.8 7.8 68 17-95 52-119 (119)
34 PLN02473 glutathione S-transfe 99.4 6.2E-13 1.3E-17 91.4 7.5 78 16-101 132-209 (214)
35 cd03206 GST_C_7 GST_C family, 99.4 1.1E-12 2.4E-17 80.3 7.3 71 16-97 30-100 (100)
36 PRK11752 putative S-transferas 99.4 1.5E-12 3.2E-17 92.7 8.1 82 17-102 176-257 (264)
37 PRK13972 GSH-dependent disulfi 99.4 1.7E-12 3.7E-17 89.5 8.2 75 16-101 129-203 (215)
38 PLN02395 glutathione S-transfe 99.4 2.6E-12 5.5E-17 88.3 7.9 79 16-102 131-209 (215)
39 PRK10357 putative glutathione 99.3 5.9E-12 1.3E-16 85.8 8.3 78 17-103 123-200 (202)
40 cd03202 GST_C_etherase_LigE GS 99.3 6.7E-12 1.4E-16 80.0 7.7 69 17-94 56-124 (124)
41 cd00299 GST_C_family Glutathio 99.3 1.8E-11 3.9E-16 73.8 7.8 70 14-91 31-100 (100)
42 cd03179 GST_C_1 GST_C family, 99.3 1.2E-11 2.6E-16 75.8 6.9 69 13-92 37-105 (105)
43 cd03193 GST_C_Metaxin GST_C fa 99.3 6.8E-12 1.5E-16 75.1 5.4 71 17-92 17-88 (88)
44 cd03192 GST_C_Sigma_like GST_C 99.3 2.2E-11 4.8E-16 74.8 7.5 71 14-91 34-104 (104)
45 PF14497 GST_C_3: Glutathione 99.3 2.7E-11 5.8E-16 74.1 7.3 68 16-93 32-99 (99)
46 KOG2903 Predicted glutathione 99.3 3.6E-12 7.7E-17 89.4 3.4 107 5-115 189-300 (319)
47 cd03195 GST_C_4 GST_C family, 99.3 3.7E-11 7.9E-16 75.5 7.7 72 17-101 40-111 (114)
48 cd03194 GST_C_3 GST_C family, 99.2 4.8E-11 1E-15 75.0 7.8 72 19-101 41-112 (114)
49 COG0435 ECM4 Predicted glutath 99.2 6.9E-12 1.5E-16 88.6 3.7 103 5-114 191-297 (324)
50 COG0625 Gst Glutathione S-tran 99.2 1.9E-10 4.1E-15 79.0 8.9 74 14-98 126-199 (211)
51 PRK10387 glutaredoxin 2; Provi 99.1 6.6E-11 1.4E-15 81.0 5.3 67 19-98 142-208 (210)
52 PRK15113 glutathione S-transfe 99.1 2.6E-10 5.7E-15 78.6 7.4 75 18-105 136-210 (214)
53 cd03200 GST_C_JTV1 GST_C famil 99.1 3.2E-10 7E-15 69.3 6.6 57 23-93 39-95 (96)
54 KOG4420 Uncharacterized conser 99.1 1.9E-09 4.1E-14 75.9 10.4 94 13-108 199-292 (325)
55 KOG1422 Intracellular Cl- chan 99.1 1.3E-09 2.9E-14 74.3 8.2 107 2-112 106-214 (221)
56 cd03205 GST_C_6 GST_C family, 99.0 1.4E-09 3E-14 66.3 7.2 67 14-91 32-98 (98)
57 cd03197 GST_C_mPGES2 GST_C fam 99.0 1.4E-09 3E-14 71.3 6.6 64 22-93 82-145 (149)
58 cd03211 GST_C_Metaxin2 GST_C f 99.0 1.1E-09 2.3E-14 70.1 5.8 71 17-92 55-126 (126)
59 cd03212 GST_C_Metaxin1_3 GST_C 99.0 1.1E-09 2.4E-14 71.0 5.4 73 16-93 61-134 (137)
60 KOG0867 Glutathione S-transfer 98.9 7.5E-09 1.6E-13 72.3 7.5 81 13-101 127-207 (226)
61 KOG1695 Glutathione S-transfer 98.9 1.1E-08 2.4E-13 70.4 7.3 76 20-102 124-199 (206)
62 KOG0868 Glutathione S-transfer 98.9 8E-09 1.7E-13 69.2 6.3 72 23-103 136-207 (217)
63 TIGR02182 GRXB Glutaredoxin, G 98.9 2.8E-09 6E-14 73.4 4.1 66 19-98 141-207 (209)
64 PLN02907 glutamate-tRNA ligase 98.7 4.6E-08 9.9E-13 78.2 6.7 66 23-96 94-159 (722)
65 KOG4244 Failed axon connection 98.2 9.8E-07 2.1E-11 62.4 3.0 67 20-93 204-272 (281)
66 PF14834 GST_C_4: Glutathione 97.8 0.00014 3E-09 45.6 6.2 69 20-101 44-112 (117)
67 KOG3029 Glutathione S-transfer 97.6 0.00028 6.1E-09 50.8 6.2 63 23-93 292-354 (370)
68 PF04399 Glutaredoxin2_C: Glut 97.5 0.0005 1.1E-08 44.3 6.1 66 19-97 59-124 (132)
69 KOG3027 Mitochondrial outer me 97.4 0.00022 4.9E-09 49.1 3.9 73 16-93 174-247 (257)
70 cd03199 GST_C_GRX2 GST_C famil 97.3 0.0017 3.6E-08 41.7 6.7 66 19-97 60-125 (128)
71 KOG3028 Translocase of outer m 97.0 0.003 6.6E-08 45.9 6.1 73 16-93 160-233 (313)
72 PF11801 Tom37_C: Tom37 C-term 91.0 0.95 2.1E-05 30.3 5.6 37 24-61 113-150 (168)
73 KOG1147 Glutamyl-tRNA syntheta 87.6 0.47 1E-05 37.5 2.4 58 24-89 93-150 (712)
74 COG2999 GrxB Glutaredoxin 2 [P 84.7 3.3 7.2E-05 28.3 5.0 64 20-97 143-207 (215)
75 KOG1668 Elongation factor 1 be 71.9 4.7 0.0001 28.5 2.8 59 25-98 10-68 (231)
76 cd06891 PX_Vps17p The phosphoi 46.7 21 0.00046 23.3 2.4 28 81-112 111-138 (140)
77 cd08200 catalase_peroxidase_2 37.6 57 0.0012 24.1 3.7 37 23-61 73-109 (297)
78 PF12972 NAGLU_C: Alpha-N-acet 37.6 65 0.0014 23.2 4.0 34 4-37 112-145 (267)
79 PF10414 CysG_dimeriser: Siroh 31.6 90 0.0019 16.7 3.1 18 94-111 14-31 (60)
80 PHA02975 hypothetical protein; 26.1 1.3E+02 0.0029 17.1 3.1 27 2-28 5-31 (69)
81 PHA00728 hypothetical protein 25.8 1.9E+02 0.0041 18.5 4.2 17 20-36 13-29 (151)
82 PF12575 DUF3753: Protein of u 25.3 1.4E+02 0.003 17.2 3.1 28 2-29 5-32 (72)
83 PRK15371 effector protein YopJ 24.8 1.2E+02 0.0026 22.3 3.5 39 19-62 23-61 (287)
84 PHA02776 E7 protein; Provision 23.8 26 0.00056 21.6 -0.0 14 45-58 1-14 (101)
85 PF03421 YopJ: YopJ Serine/Thr 23.5 1.5E+02 0.0033 20.0 3.6 36 22-62 2-37 (177)
86 PF00392 GntR: Bacterial regul 22.5 1.4E+02 0.0031 16.0 2.9 28 27-58 5-33 (64)
87 PHA02650 hypothetical protein; 22.4 1.6E+02 0.0036 17.2 3.1 27 2-28 5-31 (81)
88 PHA02844 putative transmembran 22.3 1.7E+02 0.0036 17.0 3.1 27 2-28 5-31 (75)
89 KOG4095 Uncharacterized conser 22.1 1.4E+02 0.0031 19.8 3.1 26 16-44 10-35 (165)
90 cd07993 LPLAT_DHAPAT-like Lyso 21.7 1.8E+02 0.0038 19.6 3.8 20 42-61 22-42 (205)
91 PHA02819 hypothetical protein; 21.4 1.8E+02 0.0039 16.7 3.2 29 2-30 5-33 (71)
92 PF03791 KNOX2: KNOX2 domain ; 21.1 1.5E+02 0.0033 15.9 4.2 31 5-36 18-48 (52)
93 PRK15061 catalase/hydroperoxid 21.0 1.2E+02 0.0026 25.3 3.1 37 23-61 498-534 (726)
94 PHA02692 hypothetical protein; 20.3 1.9E+02 0.0041 16.6 3.2 27 2-28 5-31 (70)
95 PF07862 Nif11: Nitrogen fixat 20.2 1.4E+02 0.0031 15.1 3.6 30 83-112 5-37 (49)
No 1
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.81 E-value=6.2e-19 Score=112.19 Aligned_cols=106 Identities=15% Similarity=0.247 Sum_probs=85.6
Q ss_pred ChhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHH-hccccccCCC
Q 037448 1 WFSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEK-INEVKLLDEV 79 (118)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~-~~~~~~~~~~ 79 (118)
+++.+++++.+.++. ++..+++.+.+..||..|++ +++||+||++|+||++++|.+.++..... ..++.+ .+
T Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~l~~~l~~Le~~L~~---~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~--~~ 86 (121)
T cd03201 14 IFSTFVGFLKSKDSN--DGTEQALLDELEALEDHLKE---NGPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSV--PE 86 (121)
T ss_pred HHHHHHHHHHCCcHH--HHHHHHHHHHHHHHHHHHhc---CCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCC--cc
Confidence 478999999886654 55677899999999999984 37899999999999999998876653211 123322 37
Q ss_pred CCchHHHHHHHHhcchhhhhcCCChHHHHHHHhh
Q 037448 80 KTPGLLKWAERFCADAAVKDVMPETDKLAKLRAS 113 (118)
Q Consensus 80 ~~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 113 (118)
.+|+|.+|++||.++|+|+.+.+..+++++.+.+
T Consensus 87 ~~P~l~~w~~rl~~rps~~~t~~~~~~~~~~~~~ 120 (121)
T cd03201 87 SLTSVKSYMKALFSRESFVKTKAEKEDVIAGWAP 120 (121)
T ss_pred cchHHHHHHHHHHCCchhhhcCCCHHHHHHHhcc
Confidence 8999999999999999999999999988887765
No 2
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.80 E-value=6.6e-19 Score=112.13 Aligned_cols=108 Identities=25% Similarity=0.366 Sum_probs=87.2
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCC
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKT 81 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (118)
++++++.+.+ +++.++..+++.+.++.+|+.|++. +++|++|+++|+||+++++++.++.......+. .++.+++
T Consensus 17 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~le~~L~~~--~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (124)
T cd03184 17 VSAFYKLLGA--PSDREEKKAELRSALENLEEELTKR--GTPFFGGDSPGMVDYMIWPWFERLEALKLLLGY-EFPLDRF 91 (124)
T ss_pred hHHHHHHHhc--cccchhhHHHHHHHHHHHHHHHHhc--CCCCcCCCCccHHHHHhhHHHHHHHHHHhhccc-cCCcccC
Confidence 5677777766 4466678889999999999999842 379999999999999999998877654322121 1224789
Q ss_pred chHHHHHHHHhcchhhhhcCCChHHHHHHHhhC
Q 037448 82 PGLLKWAERFCADAAVKDVMPETDKLAKLRASA 114 (118)
Q Consensus 82 P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~ 114 (118)
|+|.+|+++|.++|+++.+.++.+.++++++++
T Consensus 92 p~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~ 124 (124)
T cd03184 92 PKLKKWMDAMKEDPAVQAFYTDTEIHAEFLKSY 124 (124)
T ss_pred hHHHHHHHHhccChHHHHHhCCHHHHHHHHhcC
Confidence 999999999999999999999999999998864
No 3
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.78 E-value=4.7e-18 Score=110.77 Aligned_cols=112 Identities=19% Similarity=0.196 Sum_probs=88.0
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHH-HhccccccCCCC
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTE-KINEVKLLDEVK 80 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~-~~~~~~~~~~~~ 80 (118)
.+.++.++.+.+++..+...+++.+.|+.||+.|+ +++|++|+++|+|||++++.+.++.... ..........++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~----~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~ 95 (142)
T cd03190 20 NNGVYKAGFATTQEAYDEAVDELFEALDRLEELLS----DRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRD 95 (142)
T ss_pred hhHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHc----cCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhh
Confidence 45566676666777777888899999999999998 6899999999999999999887654321 110101111258
Q ss_pred CchHHHHHHHHhcchhhhhcCCChHHHHHHHhhCCCC
Q 037448 81 TPGLLKWAERFCADAAVKDVMPETDKLAKLRASAPPS 117 (118)
Q Consensus 81 ~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~~ 117 (118)
||+|.+|++||.++|+++++....+.+.+|++++.+.
T Consensus 96 ~P~L~~w~~r~~~~P~~k~~~~~~~~~~~~~~~~~~~ 132 (142)
T cd03190 96 YPNLWNYLRRLYQNPGVAETTNFDHIKQHYYGSHFPL 132 (142)
T ss_pred CchHHHHHHHHhcCchHhhhcCHHHHHHHHHhhcCCC
Confidence 9999999999999999999998888899999998653
No 4
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=4e-18 Score=118.05 Aligned_cols=111 Identities=41% Similarity=0.616 Sum_probs=91.3
Q ss_pred hHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHH-HHHHhccccccCCCCC
Q 037448 3 SALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLR-VTEKINEVKLLDEVKT 81 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~-~~~~~~~~~~~~~~~~ 81 (118)
.+...++.++++++++...+++.+.|+.||+.|.+ +++||+|+++|++||+++|.+.++. ......+.+.++..++
T Consensus 113 ~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k---~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~~~~~~~~~~~~ 189 (231)
T KOG0406|consen 113 FVGRFVVAAKGGEEQEAAKEELREALKVLEEELGK---GKDFFGGETIGFVDIAIGPSFERWLAVLEKFGGVKFIIEEET 189 (231)
T ss_pred HHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhc---CCCCCCCCCcCHhhhhHHhhHHHHHHHHHHhcCcccCCCCCC
Confidence 34455555556678888899999999999999996 6899999999999999998775554 3344444555567899
Q ss_pred chHHHHHHHHhcchhhhhcCCChHHHHHHHhhCCC
Q 037448 82 PGLLKWAERFCADAAVKDVMPETDKLAKLRASAPP 116 (118)
Q Consensus 82 P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~~ 116 (118)
|+|.+|.+||.++++|++++++.++++++++.++.
T Consensus 190 P~L~~W~~~~~~~~~V~~~~p~~e~~~e~~~~~~~ 224 (231)
T KOG0406|consen 190 PKLIKWIKRMKEDEAVKAVLPDSEKVVEFMKKYRQ 224 (231)
T ss_pred ccHHHHHHHHhcChhHHhhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887654
No 5
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.77 E-value=1e-17 Score=106.30 Aligned_cols=106 Identities=49% Similarity=0.839 Sum_probs=83.2
Q ss_pred hHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCc
Q 037448 3 SALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTP 82 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P 82 (118)
++++.++.. .++..+...+.+.+.++.||+.|+ +++|++|+++|+|||++++.+.|+..+....+.+.++.+.+|
T Consensus 20 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~~~~~~p 94 (126)
T cd03185 20 PAGRKVLAA-KGEEREKAKEEALEALKVLEEELG----GKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLLDEEKTP 94 (126)
T ss_pred HHHHHHHcc-chHHHHHHHHHHHHHHHHHHHHhc----CCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCccccCcccCc
Confidence 445555544 344556677889999999999998 679999999999999999999887654333333322246799
Q ss_pred hHHHHHHHHhcchhhhhcCCChHHHHHHHhh
Q 037448 83 GLLKWAERFCADAAVKDVMPETDKLAKLRAS 113 (118)
Q Consensus 83 ~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~ 113 (118)
++.+|+++|.++|+++++.++.+.+.+++.+
T Consensus 95 ~l~~w~~~~~~~p~~~~~~~~~~~~~~~~~~ 125 (126)
T cd03185 95 LLAAWAERFLELEAVKEVLPDRDKLVEFAKA 125 (126)
T ss_pred hHHHHHHHHHhccHHHHhCCCHHHHHHHHHh
Confidence 9999999999999999999999988887754
No 6
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.77 E-value=7.6e-18 Score=108.70 Aligned_cols=110 Identities=13% Similarity=0.222 Sum_probs=87.2
Q ss_pred ChhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccC------------CCCCeecCCCCChhHHHHHHHHHHHHHHH
Q 037448 1 WFSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCS------------KGKPFFGGNQIGFLDIAFGSYLGWLRVTE 68 (118)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~------------~~~~~~~G~~~s~aDi~l~~~~~~~~~~~ 68 (118)
+||.|...+++++++..+...+.+.+.|+.||..|++.. ++++|++|+++|+||+.++|.+.++....
T Consensus 11 ~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~ 90 (134)
T cd03198 11 IFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVA 90 (134)
T ss_pred HHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 478898899887777677778889999999999998510 03789999999999999999987765321
Q ss_pred H-hccccccCCCCCchHHHHHHHHhcchhhhhcCCChHHHHHHHh
Q 037448 69 K-INEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKLAKLRA 112 (118)
Q Consensus 69 ~-~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 112 (118)
. ..+..+ .+++|+|.+|++||.++|+++++.+..+.+...++
T Consensus 91 ~~~~g~~i--~~~~P~L~aw~~ri~aRPsfk~t~~~~~~i~~~~~ 133 (134)
T cd03198 91 KKYRNFEI--PADLTGLWRYLKNAYQREEFTNTCPADQEIELAYK 133 (134)
T ss_pred HhhcCCCc--cccCHHHHHHHHHHHCCHHHHHHcCCHHHHHHHhc
Confidence 1 124332 37899999999999999999999988877776553
No 7
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.70 E-value=4.2e-16 Score=109.28 Aligned_cols=112 Identities=15% Similarity=0.260 Sum_probs=86.7
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccC--------------CCCCeecCCCCChhHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCS--------------KGKPFFGGNQIGFLDIAFGSYLGWLRVT 67 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~--------------~~~~~~~G~~~s~aDi~l~~~~~~~~~~ 67 (118)
++.+..++.+++++..++..+++.+.++.||+.|.+.. .+++||+|+++|+||++++|.+.++...
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~ 185 (236)
T TIGR00862 106 FAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVV 185 (236)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHH
Confidence 44555555554554555566678999999999997310 1479999999999999999999887754
Q ss_pred -HHhccccccCCCCCchHHHHHHHHhcchhhhhcCCChHHHHHHHhhCC
Q 037448 68 -EKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMPETDKLAKLRASAP 115 (118)
Q Consensus 68 -~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~~~~ 115 (118)
....++++ .+++|+|.+|+++|.++|+|+.++|+.+.++..+....
T Consensus 186 ~~~~~~~~i--~~~~p~l~~w~~~~~~~~sf~~t~p~~~~i~~~~~~~~ 232 (236)
T TIGR00862 186 AKKYRNFDI--PAEFTGVWRYLSNAYAREEFTNTCPDDKEIELAYADVA 232 (236)
T ss_pred HHHHhCcCc--cccCchHHHHHHHHhccchHHhhCCChHHHHHHHHHHh
Confidence 23345554 58899999999999999999999999999888877653
No 8
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.66 E-value=1e-15 Score=97.06 Aligned_cols=86 Identities=22% Similarity=0.413 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHH-HHhccccccCCCCCchHHHHHHHHhcchhhhhc
Q 037448 22 EQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVT-EKINEVKLLDEVKTPGLLKWAERFCADAAVKDV 100 (118)
Q Consensus 22 ~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~~ 100 (118)
+++.+.++.||+.|++. ++++|++| ++|+|||+++|.+.++... ....+.++ .+++|+|.+|+++|.++|+++++
T Consensus 33 ~~~~~~l~~Le~~L~~~-~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~~~~~~--~~~~P~l~~W~~~~~~rp~~~~~ 108 (120)
T cd03203 33 AEAAAALDYIENALSKF-DDGPFFLG-QFSLVDIAYVPFIERFQIFLSELFNYDI--TEGRPNLAAWIEEMNKIEAYTQT 108 (120)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCCcCC-CccHHHHHHHHHHHHHHHHHHHhcCccc--cccCcHHHHHHHHHhcchHHHhH
Confidence 34567888899988732 14789999 9999999999998776542 22234443 26899999999999999999999
Q ss_pred CCChHHHHHHH
Q 037448 101 MPETDKLAKLR 111 (118)
Q Consensus 101 ~~~~~~~~~~~ 111 (118)
.++.+++++++
T Consensus 109 ~~~~~~~~~~~ 119 (120)
T cd03203 109 KQDPQELLDLA 119 (120)
T ss_pred cCCHHHHHhhh
Confidence 99999998875
No 9
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.62 E-value=7e-15 Score=90.98 Aligned_cols=87 Identities=22% Similarity=0.320 Sum_probs=66.9
Q ss_pred hHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCc
Q 037448 3 SALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTP 82 (118)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P 82 (118)
|.+..+... .++..+...+.+.+.+..||+.|+ +++|++|+++|+|||++++.+.++.. .+.++ .+.+|
T Consensus 20 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~~~--~~~~p 88 (107)
T cd03186 20 PLVDTIEKG-RKKEAEKARKELRESLLALAPVFA----HKPYFMSEEFSLVDCALAPLLWRLPA----LGIEL--PKQAK 88 (107)
T ss_pred HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHc----CCCcccCCCCcHHHHHHHHHHHHHHH----cCCCC--cccch
Confidence 334444433 355566677889999999999998 68999999999999999998754431 23332 25799
Q ss_pred hHHHHHHHHhcchhhhhc
Q 037448 83 GLLKWAERFCADAAVKDV 100 (118)
Q Consensus 83 ~l~~w~~r~~~~p~v~~~ 100 (118)
+|.+|+++|.++|+++.+
T Consensus 89 ~l~~w~~~~~~rpa~~~~ 106 (107)
T cd03186 89 PLKDYMERVFARDSFQKS 106 (107)
T ss_pred HHHHHHHHHHCCHHHHHh
Confidence 999999999999999875
No 10
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.61 E-value=5.7e-15 Score=91.88 Aligned_cols=74 Identities=27% Similarity=0.387 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+.+.+.++.+|+.|+ +++|++|+++|+|||++++.+.++... +. +.+++|+|.+|+++|.++|
T Consensus 40 ~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~t~aDi~~~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 108 (114)
T cd03188 40 VKAAARERLAARLAYLDAQLA----GGPYLLGDRFSVADAYLFVVLRWAPGV----GL---DLSDWPNLAAYLARVAARP 108 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCCeeeCCCcchHHHHHHHHHHHHhhc----CC---ChhhChHHHHHHHHHHhCH
Confidence 345566778999999999998 678999999999999999988765421 22 2367999999999999999
Q ss_pred hhhhc
Q 037448 96 AVKDV 100 (118)
Q Consensus 96 ~v~~~ 100 (118)
+++++
T Consensus 109 ~~k~~ 113 (114)
T cd03188 109 AVQAA 113 (114)
T ss_pred HhHhh
Confidence 99875
No 11
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.60 E-value=9.8e-15 Score=88.30 Aligned_cols=73 Identities=32% Similarity=0.484 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+++.+.|..+|+.|+ +++|++|+++|+||+++++.+.|+..... ... .++||+|.+|++||.+
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~t~ADi~~~~~~~~~~~~~~----~~~-~~~~P~l~~w~~~~~~ 93 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLK----GGPYLVGDKLTIADIALFPMLDWLERLGP----DFL-FEKFPKLKKWYERMFA 93 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----TSSSSSBSS-CHHHHHHHHHHHHHHHHTT----TTT-HTTSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----CCCeeeccCCchhHHHHHHHHHHHHHhCC----Ccc-cccCHHHHHHHHHHHc
Confidence 33566677888999999999999 79999999999999999999988765432 111 2789999999999999
Q ss_pred ch
Q 037448 94 DA 95 (118)
Q Consensus 94 ~p 95 (118)
+|
T Consensus 94 ~P 95 (95)
T PF00043_consen 94 RP 95 (95)
T ss_dssp SH
T ss_pred CC
Confidence 87
No 12
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.58 E-value=1.9e-14 Score=91.11 Aligned_cols=78 Identities=26% Similarity=0.365 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAA 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~ 96 (118)
.+...+.+.+.+..||+.|+ +++|++|+++|+||+++++.+.|+.... ... .++||+|.+|++||.++|+
T Consensus 33 ~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~T~aDi~l~~~~~~~~~~~----~~~--~~~~P~l~~~~~rv~~~p~ 102 (121)
T cd03209 33 KPDYLAKLPDKLKLFSDFLG----DRPWFAGDKITYVDFLLYEALDQHRIFE----PDC--LDAFPNLKDFLERFEALPK 102 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCCcCCCCccHHHHHHHHHHHHHHHhC----ccc--cccChHHHHHHHHHHHCHH
Confidence 44456678899999999998 5789999999999999999887775421 122 2689999999999999999
Q ss_pred hhhcCCCh
Q 037448 97 VKDVMPET 104 (118)
Q Consensus 97 v~~~~~~~ 104 (118)
++++....
T Consensus 103 vk~~~~~~ 110 (121)
T cd03209 103 ISAYMKSD 110 (121)
T ss_pred HHHHHhcc
Confidence 99986443
No 13
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.56 E-value=2.5e-14 Score=91.24 Aligned_cols=91 Identities=25% Similarity=0.232 Sum_probs=68.1
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHH
Q 037448 6 RDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLL 85 (118)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 85 (118)
..++....++..+...+.+.+.+..||+.|+++ ++++|++|+++|+||+++++.+.|+.... + .. .+++|+|.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~~~l~G~~~T~ADi~l~~~~~~~~~~~---~-~~--~~~~P~l~ 94 (126)
T cd03210 22 VRMIYQNYEAGKDDYIKDLPEQLKPFEKLLSKN-NGKGFIVGDKISFADYNLFDLLDIHLVLA---P-GC--LDAFPLLK 94 (126)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCeeeCCCccHHHHHHHHHHHHHHHhC---h-Hh--hhcChHHH
Confidence 333444334455566777889999999999742 02589999999999999999887765321 1 12 26899999
Q ss_pred HHHHHHhcchhhhhcCCC
Q 037448 86 KWAERFCADAAVKDVMPE 103 (118)
Q Consensus 86 ~w~~r~~~~p~v~~~~~~ 103 (118)
+|++||.++|+++++...
T Consensus 95 ~~~~rv~~~p~v~~~~~~ 112 (126)
T cd03210 95 AFVERLSARPKLKAYLES 112 (126)
T ss_pred HHHHHHHhCcHHHHHHhC
Confidence 999999999999987643
No 14
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=3.5e-14 Score=89.43 Aligned_cols=77 Identities=17% Similarity=0.251 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.+..||+.|+ +++|++|+++|+||+++++.+.++.... ..+ ++.+++|+|.+|+++|.++|
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~----~~~yl~Gd~~tlADi~l~~~l~~~~~~~-~~~---~~~~~~P~L~~w~~r~~~rp 109 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQ----QHSYLLGDKPSLADWAIFPFVRQFAHVD-PKW---FDQSPYPRLRRWLNGFLASP 109 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHc----cCCccCCCCccHHHHHHHHHHHHHHHhh-hcc---cCcccCHHHHHHHHHHHcCh
Confidence 355677889999999999998 5789999999999999998876654321 111 22378999999999999999
Q ss_pred hhhhc
Q 037448 96 AVKDV 100 (118)
Q Consensus 96 ~v~~~ 100 (118)
+++++
T Consensus 110 a~~~~ 114 (115)
T cd03196 110 LFSKI 114 (115)
T ss_pred HHHhh
Confidence 99875
No 15
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.55 E-value=5.6e-14 Score=86.34 Aligned_cols=76 Identities=25% Similarity=0.360 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+++.+.++.||+.|+ +++|++|+++|+|||++++.+.|.... + . .+.+|+|++|+++|.+
T Consensus 25 ~~~~~~~~~~~~~~l~~le~~l~----~~~~l~g~~~t~aDi~~~~~~~~~~~~----~--~--~~~~p~l~~w~~~~~~ 92 (103)
T cd03207 25 EPARMAGFGSYDDVLAALEQALA----KGPYLLGERFTAADVLVGSPLGWGLQF----G--L--LPERPAFDAYIARITD 92 (103)
T ss_pred cchhhhhhhhHHHHHHHHHHHHc----cCCcccCCccCHHHHHHHHHHHHHHHc----C--C--CCCChHHHHHHHHHHc
Confidence 33455567889999999999998 678999999999999999988776421 2 2 2679999999999999
Q ss_pred chhhhhcC
Q 037448 94 DAAVKDVM 101 (118)
Q Consensus 94 ~p~v~~~~ 101 (118)
+|+++.+.
T Consensus 93 ~p~~~~~~ 100 (103)
T cd03207 93 RPAFQRAA 100 (103)
T ss_pred CHHHHHHh
Confidence 99999875
No 16
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.53 E-value=1.3e-13 Score=98.33 Aligned_cols=89 Identities=13% Similarity=0.219 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHH-HHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 21 IEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVT-EKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 21 ~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
.+++.+.+..||+.|++ +++|++|+++|+||++++|.+.++... ....++++ .+.+|+|.+|+++|.++|+++.
T Consensus 173 ~~~l~~~l~~LE~~L~~---~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i--~~~~P~L~~w~~ri~~rps~~~ 247 (265)
T PLN02817 173 EQALLDELTSFDDYIKE---NGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSV--PDSLPFVKSYMKNIFSMESFVK 247 (265)
T ss_pred HHHHHHHHHHHHHHHhc---CCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--cccCHHHHHHHHHHhcchhHhh
Confidence 35677889999999984 479999999999999999998776532 11223333 3789999999999999999999
Q ss_pred cCCChHHHHHHHhhC
Q 037448 100 VMPETDKLAKLRASA 114 (118)
Q Consensus 100 ~~~~~~~~~~~~~~~ 114 (118)
+.+..+.+++.|+.+
T Consensus 248 ~~~~~~~~~~~~~~~ 262 (265)
T PLN02817 248 TRALPEDVIAGWRPK 262 (265)
T ss_pred cCCCHHHHHHHhHhh
Confidence 999888888777653
No 17
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.53 E-value=6.6e-14 Score=87.63 Aligned_cols=78 Identities=26% Similarity=0.344 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+.+.+.++.||+.|+ +++|++|+++|+|||++++++.++... ..... .+++|+|.+|.++|.+
T Consensus 40 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~l~~~~~~~~~~---~~~~~--~~~~p~l~~~~~~~~~ 110 (118)
T cd03187 40 EAVVEENEEKLKKVLDVYEARLS----KSKYLAGDSFTLADLSHLPYLQYLMAT---PFAKL--FDSRPHVKAWWEDISA 110 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc----cCcccCCCCccHHHHHHHHHHHHHHHc---cchhh--hhcCchHHHHHHHHHh
Confidence 44455567788999999999998 679999999999999999988766421 11111 3679999999999999
Q ss_pred chhhhhc
Q 037448 94 DAAVKDV 100 (118)
Q Consensus 94 ~p~v~~~ 100 (118)
+|+++++
T Consensus 111 ~p~~~~~ 117 (118)
T cd03187 111 RPAWKKV 117 (118)
T ss_pred CHHHHhh
Confidence 9999875
No 18
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.52 E-value=2e-13 Score=93.97 Aligned_cols=85 Identities=22% Similarity=0.302 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHh
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
+++..+...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++... +.++. .+.+|+|.+|++||.
T Consensus 121 ~~~~~~~~~~~l~~~l~~le~~L~----~~~~l~G~~~t~AD~~l~~~~~~~~~~----~~~~~-~~~~p~l~~w~~~~~ 191 (211)
T PRK09481 121 SASEADAARKQLREELLAIAPVFG----EKPYFMSEEFSLVDCYLAPLLWRLPVL----GIELS-GPGAKELKGYMTRVF 191 (211)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhc----cCCcccCCCccHHHHHHHHHHHHHHhc----CCCCC-CCCChhHHHHHHHHh
Confidence 344555566778899999999998 689999999999999999887655422 33332 257999999999999
Q ss_pred cchhhhhcCCChHH
Q 037448 93 ADAAVKDVMPETDK 106 (118)
Q Consensus 93 ~~p~v~~~~~~~~~ 106 (118)
++|++++++.+.+.
T Consensus 192 ~rp~~~~~~~~~~~ 205 (211)
T PRK09481 192 ERDSFLASLTEAER 205 (211)
T ss_pred ccHHHHHHcCHHHH
Confidence 99999998876544
No 19
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.52 E-value=1.8e-13 Score=86.37 Aligned_cols=75 Identities=16% Similarity=0.117 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
..+.+.+.+..+|+.|+++ +++|++|+++|+|||++++.+.|+... +.+ .+.+|+|.+|+++|.++|++++
T Consensus 45 ~~~~~~~~l~~le~~L~~~--~~~~l~G~~~t~ADi~~~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~~~ 115 (121)
T cd03191 45 YRHWIARGFAALEKLLAQT--AGKFCFGDEPTLADICLVPQVYNARRF----GVD---LSPYPTIARINEACLELPAFQA 115 (121)
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCeecCCcCCHHHHHHHHHHHHHHHh----CCC---cccCcHHHHHHHHHHhChhHHH
Confidence 4466889999999999742 247999999999999999988765432 222 2689999999999999999999
Q ss_pred cCCC
Q 037448 100 VMPE 103 (118)
Q Consensus 100 ~~~~ 103 (118)
+.+.
T Consensus 116 ~~~~ 119 (121)
T cd03191 116 AHPD 119 (121)
T ss_pred hCcC
Confidence 8754
No 20
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.51 E-value=1.2e-13 Score=79.27 Aligned_cols=68 Identities=34% Similarity=0.457 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHH
Q 037448 15 EAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAER 90 (118)
Q Consensus 15 ~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r 90 (118)
...++..+++.+.++.||+.|+ +++|++|+++|+||+++++.+.++..... +..+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~----~~~fl~G~~~s~aD~~l~~~l~~~~~~~~--~~~~--~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLA----DGPFLFGDRPSLADIALAPFLWRLRFVGP--DFDL--LEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----TSSBTTBSS--HHHHHHHHHHHHHHHCTH--TCCH--HTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----hCCCCCCCCCCHHHHHHHHHHHHHHHhCc--CcCc--cccCHHHHHHHhC
Confidence 3566778889999999999999 57799999999999999999988765532 2222 3789999999987
No 21
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.51 E-value=7.7e-14 Score=86.86 Aligned_cols=78 Identities=18% Similarity=0.322 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+.+.+.++.+|+.|+ +++|++|+++|+|||++++.+.+.... +.+. .+++|++.+|.++|.+
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~ 104 (113)
T cd03178 35 PYAIERYTNEAKRLYGVLDKRLA----GRDYLAGDEYSIADIAIFPWVRRLEWI----GIDD--LDDFPNVKRWLDRIAA 104 (113)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc----cCCcccCCCCCeeeeeHHHHHHHHHhc----cccc--hhhchHHHHHHHHHhh
Confidence 44455567888999999999998 678999999999999999888765432 2221 3689999999999999
Q ss_pred chhhhhcC
Q 037448 94 DAAVKDVM 101 (118)
Q Consensus 94 ~p~v~~~~ 101 (118)
+|+++++.
T Consensus 105 ~p~~~~~~ 112 (113)
T cd03178 105 RPAVQRGL 112 (113)
T ss_pred CHHHHHhc
Confidence 99999864
No 22
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.51 E-value=2e-13 Score=86.72 Aligned_cols=80 Identities=28% Similarity=0.380 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHh
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
.++..+...+++.+.++.+|+.+.+ +++|++|+++|+||+++++.+.++... +.+. .+++|+|.+|+++|.
T Consensus 39 ~~~~~~~~~~~~~~~l~~le~~l~~---~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~ 109 (126)
T cd03183 39 SPEKVKKAEENLEESLDLLENYFLK---DKPFLAGDEISIADLSAVCEIMQPEAA----GYDV--FEGRPKLAAWRKRVK 109 (126)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCCCCHHHHHHHHHHHHHHhc----CCcc--cccCchHHHHHHHHH
Confidence 3445566677899999999997542 478999999999999999887655321 3222 378999999999999
Q ss_pred c--chhhhhcC
Q 037448 93 A--DAAVKDVM 101 (118)
Q Consensus 93 ~--~p~v~~~~ 101 (118)
+ +|+++++.
T Consensus 110 ~~~~p~~~~~~ 120 (126)
T cd03183 110 EAGNPLFDEAH 120 (126)
T ss_pred HhcchhHHHHH
Confidence 9 89998753
No 23
>PLN02378 glutathione S-transferase DHAR1
Probab=99.49 E-value=3.6e-13 Score=92.98 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHH-hccccccCCCCCchHHHHHHHHhcchhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEK-INEVKLLDEVKTPGLLKWAERFCADAAVK 98 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~r~~~~p~v~ 98 (118)
..+.+.+.+..+|+.|+.. +++|++||++|+||++++|.+.++..... ..++++ .+.||+|.+|+++|.++|+++
T Consensus 119 ~~~~~~~~l~~le~~L~~~--~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~--~~~~p~l~~w~~~~~~rpa~~ 194 (213)
T PLN02378 119 SEHALLVELEALENHLKSH--DGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSV--PESFPHVHNYMKTLFSLDSFE 194 (213)
T ss_pred HHHHHHHHHHHHHHHHhcC--CCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCc--hhHhHHHHHHHHHHhcCCCee
Confidence 3456778899999999843 47899999999999999999877653211 122222 368999999999999999999
Q ss_pred hcCCChHHHHHHHhh
Q 037448 99 DVMPETDKLAKLRAS 113 (118)
Q Consensus 99 ~~~~~~~~~~~~~~~ 113 (118)
++.+.....+..+..
T Consensus 195 ~~~~~~~~~~~~~~~ 209 (213)
T PLN02378 195 KTKTEEKYVISGWAP 209 (213)
T ss_pred cccCChHHHHHHHHh
Confidence 998777666554443
No 24
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.48 E-value=2.7e-13 Score=84.86 Aligned_cols=74 Identities=19% Similarity=0.375 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..++..+++.+.++.||+.|+ +++|++||++|+|||++++.+.|+... +.++ .+.+|+|.+|+++|.+
T Consensus 44 ~~~~~~~~~~l~~~l~~le~~L~----~~~~l~gd~~t~aDi~l~~~~~~~~~~----~~~~--~~~~p~l~~w~~~~~~ 113 (117)
T cd03182 44 PEWGERSKARAADFLAYLDTRLA----GSPYVAGDRFTIADITAFVGLDFAKVV----KLRV--PEELTHLRAWYDRMAA 113 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCcccCCCCCHHHHHHHHHhHHHHhc----CCCC--ccccHHHHHHHHHHHh
Confidence 44456677889999999999998 578999999999999999998776432 3332 3689999999999999
Q ss_pred chhh
Q 037448 94 DAAV 97 (118)
Q Consensus 94 ~p~v 97 (118)
+|+|
T Consensus 114 ~p~~ 117 (117)
T cd03182 114 RPSA 117 (117)
T ss_pred ccCC
Confidence 9975
No 25
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.48 E-value=3.7e-13 Score=87.25 Aligned_cols=72 Identities=17% Similarity=0.210 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhhcCC
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMP 102 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~~~~ 102 (118)
.+.+.+..||+.|+.+ +++|++|+++|+||+++++.+.|+.... ... .+.||+|.+|++||.++|++++++.
T Consensus 43 ~~~~~l~~lE~~L~~~--~~~~l~G~~~T~ADi~l~~~l~~~~~~~----~~~--l~~~P~l~~~~~rv~~~P~vk~~~~ 114 (137)
T cd03208 43 AKNRYFPVFEKVLKSH--GQDFLVGNKLSRADIHLLEAILMVEELD----PSL--LSDFPLLQAFKTRISNLPTIKKFLQ 114 (137)
T ss_pred HHHHHHHHHHHHHHhC--CCCeeeCCCCCHHHHHHHHHHHHHHHhc----hhh--hccChHHHHHHHHHHcCHHHHHHHh
Confidence 4578999999999743 4689999999999999999887765321 111 3689999999999999999998753
No 26
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.48 E-value=4.3e-13 Score=84.09 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccC------CCCCeecCCCCChhHHHHHHHHHHHHHHHHhcccccc--CCCCCchH
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCS------KGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLL--DEVKTPGL 84 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~------~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~--~~~~~P~l 84 (118)
+.+..+...+++.+.++.||+.|+++. ++++|++|+++|+|||++++.+.|+..+ +.+.- ....||+|
T Consensus 23 ~~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~----~~~~~~~~~~~~P~l 98 (111)
T cd03204 23 NVEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFL----GLSRRYWGNGKRPNL 98 (111)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHc----CccccccccccChHH
Confidence 344556677888999999999998421 1126999999999999999998877532 22210 02579999
Q ss_pred HHHHHHHhcchhh
Q 037448 85 LKWAERFCADAAV 97 (118)
Q Consensus 85 ~~w~~r~~~~p~v 97 (118)
.+|++||.++|++
T Consensus 99 ~~w~~rv~aRpsf 111 (111)
T cd03204 99 EAYFERVLQRESF 111 (111)
T ss_pred HHHHHHHHcCCCC
Confidence 9999999999975
No 27
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.47 E-value=4.5e-13 Score=82.77 Aligned_cols=71 Identities=21% Similarity=0.435 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.|+.+|+.|+ +++|++|+++|+||+++++++...... +. +.+++|+|.+|.++|.++|
T Consensus 40 ~~~~~~~~~~~~l~~lE~~L~----~~~~l~g~~~t~aDi~~~~~~~~~~~~----~~---~~~~~p~l~~~~~~~~~~p 108 (110)
T cd03180 40 AIAASLAAWAKLMAILDAQLA----GRPYLAGDRFTLADIPLGCSAYRWFEL----PI---ERPPLPHLERWYARLRARP 108 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCcccCCCCCHHHHHHHHHHHHHHHc----cc---ccccCchHHHHHHHHHhCC
Confidence 345567789999999999998 678999999999999999887322111 21 2478999999999999998
Q ss_pred hh
Q 037448 96 AV 97 (118)
Q Consensus 96 ~v 97 (118)
++
T Consensus 109 ~~ 110 (110)
T cd03180 109 AF 110 (110)
T ss_pred CC
Confidence 75
No 28
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.47 E-value=4.9e-13 Score=91.55 Aligned_cols=75 Identities=17% Similarity=0.113 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
..+.+.+.++.+|+.|+++ +++|++|+++|+||+++++++.|+..+ +.. .++||+|++|+++|.++|++++
T Consensus 130 ~~~~~~~~l~~le~~L~~~--~~~~l~G~~~T~ADi~~~~~l~~~~~~----~~~---~~~~p~l~~~~~~~~~rp~~~~ 200 (210)
T TIGR01262 130 YQHWISKGFAALEALLQPH--AGAFCVGDTPTLADLCLVPQVYNAERF----GVD---LTPYPTLRRIAAALAALPAFQR 200 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC--CCCEeeCCCCCHHHHHHHHHHHHHHHc----CCC---cccchHHHHHHHHHhcCHHHHH
Confidence 4556889999999999853 367999999999999999988765422 222 3689999999999999999999
Q ss_pred cCCC
Q 037448 100 VMPE 103 (118)
Q Consensus 100 ~~~~ 103 (118)
+..+
T Consensus 201 ~~~~ 204 (210)
T TIGR01262 201 AHPE 204 (210)
T ss_pred hCcc
Confidence 8754
No 29
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.46 E-value=3.9e-13 Score=84.57 Aligned_cols=76 Identities=21% Similarity=0.343 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.++.||+.|+ +++|++|+++|+||+++++++.|+... .+.+ ...+|+|.+|+++|.++|
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~aDi~l~~~~~~~~~~---~~~~---~~~~p~l~~w~~~~~~~p 104 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLE----GSDYVAGDQLTIADLSLVATVSTLEAL---LPLD---LSKYPNVRAWLERLKALP 104 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHc----cCCeeCCCCcCHHHHHHHHHHHHHHHh---cCCC---hhhCchHHHHHHHHHccc
Confidence 344567788999999999998 578999999999999999998877531 1222 357999999999999999
Q ss_pred hhhhcC
Q 037448 96 AVKDVM 101 (118)
Q Consensus 96 ~v~~~~ 101 (118)
++++..
T Consensus 105 ~~~~~~ 110 (118)
T cd03177 105 PYEEAN 110 (118)
T ss_pred chHHHH
Confidence 999864
No 30
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.45 E-value=4e-13 Score=84.75 Aligned_cols=83 Identities=22% Similarity=0.316 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.|+.... .+... .+.+|++.+|.+++.+
T Consensus 35 ~~~~~~~~~~~~~~l~~le~~l~----~~~~l~G~~~siaDi~l~~~~~~~~~~~--~~~~~--~~~~p~l~~w~~~~~~ 106 (123)
T cd03181 35 KKSVEAALEELDRVLGVLEERLL----KRTYLVGERLTLADIFVAGALLLGFTYV--FDKEW--RAKYPNVTRWFNTVVN 106 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----cCceeccCCccHHHHHHHHHHHHHHHHH--cCHHH--HHhChHHHHHHHHHHc
Confidence 34555667788999999999998 6789999999999999999887763321 11111 2579999999999999
Q ss_pred chhhhhcCCCh
Q 037448 94 DAAVKDVMPET 104 (118)
Q Consensus 94 ~p~v~~~~~~~ 104 (118)
+|+++++..+.
T Consensus 107 ~p~~~~~~~~~ 117 (123)
T cd03181 107 QPIFKAVFGEV 117 (123)
T ss_pred CHHHHHHcCCC
Confidence 99999987543
No 31
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.44 E-value=5.8e-13 Score=90.60 Aligned_cols=73 Identities=14% Similarity=0.245 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhh
Q 037448 18 KAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAV 97 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v 97 (118)
+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.|+... +.+ .+.+|+|.+|+++|.++|++
T Consensus 123 ~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~ADi~l~~~~~~~~~~----~~~---~~~~p~l~~w~~~~~~~p~~ 191 (201)
T PRK10542 123 PTVRAQLEKKFQYVDEALA----DEQWICGQRFTIADAYLFTVLRWAYAV----KLN---LEGLEHIAAYMQRVAERPAV 191 (201)
T ss_pred HHHHHHHHHHHHHHHHHhc----CCCeeeCCCCcHHhHHHHHHHHHhhcc----CCC---cccchHHHHHHHHHHcCHHH
Confidence 3456678899999999998 678999999999999999887765322 222 36799999999999999999
Q ss_pred hhcC
Q 037448 98 KDVM 101 (118)
Q Consensus 98 ~~~~ 101 (118)
++++
T Consensus 192 k~~~ 195 (201)
T PRK10542 192 AAAL 195 (201)
T ss_pred HHHH
Confidence 9875
No 32
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.43 E-value=5.7e-13 Score=91.40 Aligned_cols=75 Identities=16% Similarity=0.129 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
..+.+.+.+..+|+.|+++ +++|++|+++|+||+++++++.++... .+.. .++||+|.+|.+||.++|++++
T Consensus 124 ~~~~~~~~l~~le~~L~~~--~~~~l~Gd~~T~AD~~l~~~~~~~~~~---~~~~---l~~~P~l~~~~~r~~~~P~~k~ 195 (205)
T PTZ00057 124 LNEELPKWSGYFENILKKN--HCNYFVGDNLTYADLAVFNLYDDIETK---YPNS---LKNFPLLKAHNEFISNLPNIKN 195 (205)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCeeeCCcccHHHHHHHHHHHHHHHh---Chhh---hccChhHHHHHHHHHhChHHHH
Confidence 4567889999999999853 458999999999999999887765421 1222 3789999999999999999999
Q ss_pred cCC
Q 037448 100 VMP 102 (118)
Q Consensus 100 ~~~ 102 (118)
++.
T Consensus 196 y~~ 198 (205)
T PTZ00057 196 YIS 198 (205)
T ss_pred HHH
Confidence 863
No 33
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.43 E-value=9e-13 Score=82.77 Aligned_cols=68 Identities=24% Similarity=0.201 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
.+...+++.+.++.||+.|+ +++|++|+++|+|||++++.+.|+... +. +.+.+|+|.+|+++|.++|
T Consensus 52 ~~~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~l~~~~~~~~~~----~~---~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 52 AGFINPELKKHLDFLEDRLA----KKGYFVGDKLTAADIMMSFPLEAALAR----GP---LLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHhHHHHHHHHHHHHHHc----cCCCCCCCCCCHHHHHHHHHHHHHHHc----Cc---ccccCchHHHHHHHHhcCC
Confidence 33456678999999999998 678999999999999999888776422 21 1378999999999999876
No 34
>PLN02473 glutathione S-transferase
Probab=99.42 E-value=6.2e-13 Score=91.41 Aligned_cols=78 Identities=17% Similarity=0.301 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.++.+|+.|+ +++|++|+++|+||+++++.+.|+....... .. .+++|+|.+|++||.++|
T Consensus 132 ~~~~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~~~~~~~~~~~~~~~~--~~--~~~~P~l~~w~~~~~~~p 203 (214)
T PLN02473 132 LVEELKVKFDKVLDVYENRLA----TNRYLGGDEFTLADLTHMPGMRYIMNETSLS--GL--VTSRENLNRWWNEISARP 203 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----cCCcccCCCCCHHHHHHHHHHHHHHhccccH--HH--HhcCHHHHHHHHHHhcCh
Confidence 344456678889999999998 5789999999999999999887654221111 11 268999999999999999
Q ss_pred hhhhcC
Q 037448 96 AVKDVM 101 (118)
Q Consensus 96 ~v~~~~ 101 (118)
+++++.
T Consensus 204 ~~~~~~ 209 (214)
T PLN02473 204 AWKKLM 209 (214)
T ss_pred hhHHHH
Confidence 999875
No 35
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.41 E-value=1.1e-12 Score=80.32 Aligned_cols=71 Identities=25% Similarity=0.425 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..++..+++.+.++.+|+.|+ +++|++|+++|+||+.+++++.+... .+. +.+++|+|.+|.++|.++|
T Consensus 30 ~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~t~aDi~~~~~~~~~~~----~~~---~~~~~p~l~~~~~~~~~~p 98 (100)
T cd03206 30 DKETAIARAHRLLRLLEEHLA----GRDWLAGDRPTIADVAVYPYVALAPE----GGV---DLEDYPAIRRWLARIEALP 98 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHc----cCCccCCCCCCHHHHHHHHHHHHHhc----cCC---ChhhCcHHHHHHHHHHhCc
Confidence 445667889999999999998 57899999999999999988754321 121 2368999999999999998
Q ss_pred hh
Q 037448 96 AV 97 (118)
Q Consensus 96 ~v 97 (118)
++
T Consensus 99 ~~ 100 (100)
T cd03206 99 GF 100 (100)
T ss_pred CC
Confidence 74
No 36
>PRK11752 putative S-transferase; Provisional
Probab=99.40 E-value=1.5e-12 Score=92.75 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAA 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~ 96 (118)
.+...+++.+.|+.+|+.|+ +++||+|+++|+|||++++++.++...........++.+.||+|.+|+++|.++|+
T Consensus 176 ~~~~~~~~~~~L~~le~~L~----~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rPs 251 (264)
T PRK11752 176 INRFTMEAKRQLDVLDKQLA----EHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERPA 251 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhc----cCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhCHH
Confidence 34445667889999999998 57899999999999999988766532110111111224789999999999999999
Q ss_pred hhhcCC
Q 037448 97 VKDVMP 102 (118)
Q Consensus 97 v~~~~~ 102 (118)
++++..
T Consensus 252 ~k~~~~ 257 (264)
T PRK11752 252 VKRGRI 257 (264)
T ss_pred HHHHHh
Confidence 998764
No 37
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.40 E-value=1.7e-12 Score=89.48 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.+..||+.|+ +++|++|+++|+|||++++.+.+... .+. +.++||+|.+|++||.++|
T Consensus 129 ~~~~~~~~~~~~l~~le~~L~----~~~~l~Gd~~t~ADi~l~~~~~~~~~----~~~---~~~~~P~l~~w~~r~~~rp 197 (215)
T PRK13972 129 AIERYQVETQRLYHVLNKRLE----NSPWLGGENYSIADIACWPWVNAWTR----QRI---DLAMYPAVKNWHERIRSRP 197 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----cCccccCCCCCHHHHHHHHHHHHHhh----cCC---cchhCHHHHHHHHHHHhCH
Confidence 344456678889999999998 67899999999999999886632211 122 2378999999999999999
Q ss_pred hhhhcC
Q 037448 96 AVKDVM 101 (118)
Q Consensus 96 ~v~~~~ 101 (118)
+++++.
T Consensus 198 ~~~~~~ 203 (215)
T PRK13972 198 ATGQAL 203 (215)
T ss_pred HHHHHH
Confidence 998865
No 38
>PLN02395 glutathione S-transferase
Probab=99.37 E-value=2.6e-12 Score=88.33 Aligned_cols=79 Identities=20% Similarity=0.317 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcch
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADA 95 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p 95 (118)
..+...+++.+.++.||+.|+ +++|++|+++|+||+++++++.++.. ....... .+.+|+|.+|+++|.++|
T Consensus 131 ~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~s~ADi~l~~~~~~~~~--~~~~~~~--~~~~p~L~~w~~~~~~rp 202 (215)
T PLN02395 131 VIKESEEKLAKVLDVYEARLS----KSKYLAGDFVSLADLAHLPFTEYLVG--PIGKAYL--IKDRKHVSAWWDDISSRP 202 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----CCccccCCCcCHHHHHHHHHHHHHhc--ccchhhh--hccCchHHHHHHHHHcCh
Confidence 344556778899999999998 57899999999999999988765521 1111111 367999999999999999
Q ss_pred hhhhcCC
Q 037448 96 AVKDVMP 102 (118)
Q Consensus 96 ~v~~~~~ 102 (118)
++++++.
T Consensus 203 ~~k~~~~ 209 (215)
T PLN02395 203 AWKEVLA 209 (215)
T ss_pred HHHHHHH
Confidence 9998753
No 39
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.35 E-value=5.9e-12 Score=85.83 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAA 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~ 96 (118)
.+...+.+.+.++.||+.|+ +++ ++|+++|+||+++++.+.|+.... . +... ..++|+|.+|++||.++|+
T Consensus 123 ~~~~~~~l~~~l~~le~~L~----~~~-l~Gd~~t~ADi~l~~~l~~~~~~~-~-~~~~--~~~~p~l~~~~~~i~~rp~ 193 (202)
T PRK10357 123 LLRQREKINRSLDALEGYLV----DGT-LKTDTVNLATIAIACAVGYLNFRR-V-APGW--CVDRPHLVKLVENLFQRES 193 (202)
T ss_pred HHHHHHHHHHHHHHHHHhhc----cCc-ccCCCcCHHHHHHHHHHHHHHhcc-c-Ccch--hhcChHHHHHHHHHhcChh
Confidence 34556778899999999998 566 999999999999999887764321 1 1111 2579999999999999999
Q ss_pred hhhcCCC
Q 037448 97 VKDVMPE 103 (118)
Q Consensus 97 v~~~~~~ 103 (118)
++++.|+
T Consensus 194 ~~~~~~~ 200 (202)
T PRK10357 194 FARTEPP 200 (202)
T ss_pred hhhcCCC
Confidence 9998865
No 40
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.34 E-value=6.7e-12 Score=80.01 Aligned_cols=69 Identities=23% Similarity=0.417 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcc
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCAD 94 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~ 94 (118)
.+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.|.... .+.++ .+.+|+|.+|++||.++
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~----~~~fl~Gd~~t~AD~~l~~~l~~~~~~---~~~~~--~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLK----GQPFLGGAAPNYADYIVFGGFQWARIV---SPFPL--LEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHc----CCCccCCCCCchhHHHHHHHHHHHHHc---Ccccc--cccCChHHHHHHHHhcC
Confidence 34567778899999999998 688999999999999999888776432 13332 36899999999999863
No 41
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.30 E-value=1.8e-11 Score=73.78 Aligned_cols=70 Identities=29% Similarity=0.499 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHH
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERF 91 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~ 91 (118)
++..+...+++.+.++.||+.|+ +++|++|+++|+||+++++++.|+.......+ + .+.+|++.+|.++|
T Consensus 31 ~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~~--~--~~~~p~l~~~~~~~ 100 (100)
T cd00299 31 EAALEEAREELAAALAALEKLLA----GRPYLAGDRFSLADIALAPVLARLDLLGPLLG--L--LDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc----cCCCCCCCCcCHHHHHHHHHHHHHHHhhhhhh--h--hccCccHHHHHHhC
Confidence 45566678889999999999998 57899999999999999999988765432111 1 36799999999985
No 42
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.30 E-value=1.2e-11 Score=75.77 Aligned_cols=69 Identities=23% Similarity=0.329 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHh
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
+++..+...+++.+.++.||..|+ +++|++|+++|+|||++++.+.|+... +.+ ..++|+|.+|.+++.
T Consensus 37 ~~~~~~~~~~~~~~~l~~le~~L~----~~~~l~g~~~slaDi~~~~~~~~~~~~----~~~---~~~~p~l~~~~~~~~ 105 (105)
T cd03179 37 DAEVLAFLRERGHAALAVLEAHLA----GRDFLVGDALTIADIALAAYTHVADEG----GFD---LADYPAIRAWLARIE 105 (105)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHc----cCccccCCCCCHHHHHHHHHHHhcccc----CCC---hHhCccHHHHHHhhC
Confidence 455566678889999999999997 678999999999999999988775421 222 367999999999873
No 43
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.29 E-value=6.8e-12 Score=75.14 Aligned_cols=71 Identities=23% Similarity=0.223 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccc-cCCCCCchHHHHHHHHh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKL-LDEVKTPGLLKWAERFC 92 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~-~~~~~~P~l~~w~~r~~ 92 (118)
..+..+++.+.++.+|+.|+ +++|++|+++|+||+++++.+.++.... ...... .+.+.+|+|.+|++||.
T Consensus 17 ~~~~~~~~~~~l~~le~~L~----~~~yl~Gd~~t~aDi~l~~~l~~~~~~~-~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 17 TREIYSLAKKDLKALSDLLG----DKKFFFGDKPTSLDATVFGHLASILYAP-LPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCCccCCCCCCHHHHHHHHHHHHHHhcC-CCChHHHHHHHhCcHHHHHHHHhC
Confidence 33567788899999999998 6789999999999999999887764320 100000 01257999999999974
No 44
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.28 E-value=2.2e-11 Score=74.76 Aligned_cols=71 Identities=23% Similarity=0.266 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHH
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERF 91 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~ 91 (118)
++..+...+.+.+.+..||+.|..+ +++|++|+++|+||+++++++.|+.... .... .+.+|+|.+|.+++
T Consensus 34 ~~~~~~~~~~~~~~l~~le~~l~~~--~~~~~~G~~~s~aDi~l~~~~~~~~~~~---~~~~--~~~~p~l~~~~~~~ 104 (104)
T cd03192 34 EKKKEFLKEAIPKYLKKLEKILKEN--GGGYLVGDKLTWADLVVFDVLDYLLYLD---PKLL--LKKYPKLKALRERV 104 (104)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHc--CCCeeeCCCccHHHHHHHHHHHHHHhhC---chhh--HHhChhHHHHHHhC
Confidence 3445556777889999999999831 2789999999999999999987764331 1111 36799999999885
No 45
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.27 E-value=2.7e-11 Score=74.09 Aligned_cols=68 Identities=28% Similarity=0.431 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
..+...+++.+.+..+|+.|+++ +++||+|++||+||+++++.+..+. .. . + .++||+|.+|++||.+
T Consensus 32 ~~~~~~~~~~~~l~~l~~~L~~~--~~~~l~G~~~T~AD~~v~~~l~~~~-----~~-~-~-~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 32 SGDFSREELPKALKILEKHLAER--GGDFLVGDKPTLADIAVFGFLASLR-----WA-D-F-PKDYPNLVRWYERIEE 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--SSSSSSSSS--HHHHHHHHHHHHHH-----CC-H-H-TTTCHHHHHHHHHHHT
T ss_pred hHHhhHHHHHHHHHHHHHHHHcC--CCeeecCCCCCHHHHHHHHHHHHHh-----hc-c-c-ccccHHHHHHHHhhcC
Confidence 34456778899999999999965 3449999999999999998763222 11 1 2 2589999999999974
No 46
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=3.6e-12 Score=89.38 Aligned_cols=107 Identities=21% Similarity=0.230 Sum_probs=85.0
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHH-HHh--ccccccCCCCC
Q 037448 5 LRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVT-EKI--NEVKLLDEVKT 81 (118)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~-~~~--~~~~~~~~~~~ 81 (118)
.|++.+|+.++..+..++++.++|+.+|..|+++ -+.|++|+++|-|||.|++.+.+++.. ..+ ++...+ .++|
T Consensus 189 VYk~GFA~~~e~Ye~~V~~lfe~LDr~E~vL~~~--~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~i-r~~Y 265 (319)
T KOG2903|consen 189 VYKCGFAEKQEAYEEEVNQLFEALDRCEDVLGKN--RKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTI-RDEY 265 (319)
T ss_pred eeeeccccccchHHHHHHHHHHHHHHHHHHHhcc--cceEeeccccchhheeeeeeEEeehhhhheeeecchhhh-hccC
Confidence 4778899899999999999999999999999963 345899999999999999999888743 222 233333 5789
Q ss_pred chHHHHHHHHhc-chhhhhcCCChHHH-HHHHhhCC
Q 037448 82 PGLLKWAERFCA-DAAVKDVMPETDKL-AKLRASAP 115 (118)
Q Consensus 82 P~l~~w~~r~~~-~p~v~~~~~~~~~~-~~~~~~~~ 115 (118)
|+|..|.+++-+ .|++..+. +-..+ ..++++..
T Consensus 266 p~l~~~lk~iY~~~~~~~~Tt-d~~hIk~~Y~~S~~ 300 (319)
T KOG2903|consen 266 PNLHNWLKNIYWNIPGFSSTT-DFNHIKLHYYRSHP 300 (319)
T ss_pred cHHHHHHHHHHhhccchhhcc-chhHHhhhhccccC
Confidence 999999999998 89999886 55554 45566554
No 47
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.26 E-value=3.7e-11 Score=75.46 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAA 96 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~ 96 (118)
.+...+.+.+.+..+|..|+. +++|++| ++|+||+++++.+.|+... +.++ . |++.+|.+||.++|+
T Consensus 40 ~~~~~~~~~~~~~~le~~l~~---~~~~l~G-~fSiAD~~l~~~~~~~~~~----g~~l---~--p~l~ay~~r~~~rPa 106 (114)
T cd03195 40 SEAAQAAAEKLIAVAEALLPP---GAANLFG-EWCIADTDLALMLNRLVLN----GDPV---P--ERLRDYARRQWQRPS 106 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHhc---CCCcccC-CccHHHHHHHHHHHHHHHc----CCCC---C--HHHHHHHHHHHCCHH
Confidence 344567778888999999862 4589999 5999999999998877543 4332 2 999999999999999
Q ss_pred hhhcC
Q 037448 97 VKDVM 101 (118)
Q Consensus 97 v~~~~ 101 (118)
|++..
T Consensus 107 ~~~~~ 111 (114)
T cd03195 107 VQAWL 111 (114)
T ss_pred HHHHH
Confidence 99864
No 48
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.25 E-value=4.8e-11 Score=75.01 Aligned_cols=72 Identities=15% Similarity=0.352 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhh
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVK 98 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~ 98 (118)
...+.+.+.+..+|..+++.. +++|++|| +|+||+++++++.|+... +.+ ..|+|.+|++||.++|+++
T Consensus 41 ~~~~~~~~~~~~le~~l~~~~-~~~yl~Gd-~T~ADi~l~~~~~~~~~~----~~~-----~~P~l~~~~~rv~~rPsv~ 109 (114)
T cd03194 41 AVQADIARIEAIWAECLARFQ-GGPFLFGD-FSIADAFFAPVVTRFRTY----GLP-----LSPAAQAYVDALLAHPAMQ 109 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CCCCCCCC-CcHHHHHHHHHHHHHHHc----CCC-----CCHHHHHHHHHHHCCHHHH
Confidence 344556666667776664321 46899999 999999999888776421 222 2399999999999999999
Q ss_pred hcC
Q 037448 99 DVM 101 (118)
Q Consensus 99 ~~~ 101 (118)
+++
T Consensus 110 ~~~ 112 (114)
T cd03194 110 EWI 112 (114)
T ss_pred HHH
Confidence 864
No 49
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=6.9e-12 Score=88.62 Aligned_cols=103 Identities=18% Similarity=0.233 Sum_probs=83.3
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHH-Hh--ccccccCCCCC
Q 037448 5 LRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTE-KI--NEVKLLDEVKT 81 (118)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~-~~--~~~~~~~~~~~ 81 (118)
.|++.+|+.++..+++.+++.+.|+.||..|+ ++.|++||++|-||+-|++.+-+|+..- .+ |+..-+ .+|
T Consensus 191 VYk~GFA~tq~aYeea~~~lF~~Ld~lE~~L~----~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI--~dy 264 (324)
T COG0435 191 VYKAGFATTQEAYEEAVKKLFEALDKLEQILS----ERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRI--RDY 264 (324)
T ss_pred eeeecccchHHHHHHHHHHHHHHHHHHHHHhh----cCeeeccccchHhhhhhhheeEeecceEEeeeecccchh--hcC
Confidence 46788899999999999999999999999999 6899999999999999999998887431 11 233222 569
Q ss_pred chHHHHHHHHhcchhhhhcCCChHHHH-HHHhhC
Q 037448 82 PGLLKWAERFCADAAVKDVMPETDKLA-KLRASA 114 (118)
Q Consensus 82 P~l~~w~~r~~~~p~v~~~~~~~~~~~-~~~~~~ 114 (118)
|+|..|...+.+.|+|..+. +.+.+. .+++|.
T Consensus 265 pnL~~yLr~LYq~pg~~~T~-df~hIK~hYyrSh 297 (324)
T COG0435 265 PNLWGYLRDLYQLPGFAETV-DFDHIKLHYYRSH 297 (324)
T ss_pred chHHHHHHHHhcCccccccc-chhHhhhhheecc
Confidence 99999999999999999986 555543 445543
No 50
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.19 E-value=1.9e-10 Score=79.01 Aligned_cols=74 Identities=28% Similarity=0.429 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++..+...+.+.+.+..+|+.|+ +++|++|+++|+||+.+++.+.|+... +.. .+.+|++.+|++||.+
T Consensus 126 ~~~~~~~~~~~~~~l~~le~~L~----~~~~l~G~~~tiAD~~~~~~~~~~~~~----~~~---~~~~p~l~~w~~r~~~ 194 (211)
T COG0625 126 EAALEAARAEIRALLALLEALLA----DGPYLAGDRFTIADIALAPLLWRLALL----GEE---LADYPALKAWYERVLA 194 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cCCcccCCCCCHHHHHHHHHHHHhhhc----Ccc---cccChHHHHHHHHHHc
Confidence 44556677888999999999999 689999999999999999988765322 211 2679999999999999
Q ss_pred chhhh
Q 037448 94 DAAVK 98 (118)
Q Consensus 94 ~p~v~ 98 (118)
+|++.
T Consensus 195 rp~~~ 199 (211)
T COG0625 195 RPAFR 199 (211)
T ss_pred CCchh
Confidence 99954
No 51
>PRK10387 glutaredoxin 2; Provisional
Probab=99.15 E-value=6.6e-11 Score=80.98 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhh
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVK 98 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~ 98 (118)
+..+++.+.|+.+|+.|+ + +|++|+++|+||+++++.+.|+... .+ + +.+|+|.+|++||.++|++.
T Consensus 142 ~~~~~~~~~l~~le~~L~----~-~~l~G~~~s~ADi~l~~~l~~~~~~---~~---~--~~~p~l~~w~~r~~~r~~~~ 208 (210)
T PRK10387 142 GLIKEINADLRALDPLIV----K-PNAVNGELSTDDIHLFPILRNLTLV---KG---I--EWPPRVADYRDNMSKKTQVP 208 (210)
T ss_pred HHHHHHHHHHHHHHHHhc----C-ccccCCCCCHHHHHHHHHHhcceee---cC---C--CCCHHHHHHHHHHHHHhCCC
Confidence 456678899999999987 5 8999999999999999988776432 12 1 24699999999999999864
No 52
>PRK15113 glutathione S-transferase; Provisional
Probab=99.12 E-value=2.6e-10 Score=78.59 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhh
Q 037448 18 KAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAV 97 (118)
Q Consensus 18 ~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v 97 (118)
+...+.+.+.+..+|+.|++ +++|++|+ +|+||+++++.+.|+... +..+ .|+|.+|++||.++|++
T Consensus 136 ~~~~~~~~~~l~~le~~L~~---~~~~l~G~-~TlADi~l~~~l~~~~~~----~~~~-----~p~l~~~~~r~~~rp~~ 202 (214)
T PRK15113 136 EAGKAAAEKLFAVAERLLAP---GQPNLFGE-WCIADTDLALMLNRLVLH----GDEV-----PERLADYATFQWQRASV 202 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhc---CCCEeeCC-ccHHHHHHHHHHHHHHHc----CCCC-----CHHHHHHHHHHhcCHHH
Confidence 44566788999999999984 35799996 999999999988765421 2221 29999999999999999
Q ss_pred hhcCCChH
Q 037448 98 KDVMPETD 105 (118)
Q Consensus 98 ~~~~~~~~ 105 (118)
+++..+.+
T Consensus 203 ~~~~~~~~ 210 (214)
T PRK15113 203 QRWLALSA 210 (214)
T ss_pred HHHHHHhh
Confidence 98764433
No 53
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.11 E-value=3.2e-10 Score=69.27 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
++.+.+..+|+.|+ +++|++|+++|+|||++++.+.+. +. +.+.+|+|.+|++||.+
T Consensus 39 ~~~~~l~~le~~L~----~~~fl~Gd~~tiADi~l~~~l~~~-------~~---~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 39 EKAAVLRALNSALG----RSPWLVGSEFTVADIVSWCALLQT-------GL---ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHc----CCCccCCCCCCHHHHHHHHHHHHc-------cc---ccccChHHHHHHHHHHh
Confidence 44568888999998 678999999999999999776431 21 13679999999999975
No 54
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.09 E-value=1.9e-09 Score=75.86 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=70.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHh
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
+.....+..+++...|+++|+.|..+....+|++|+.+|+||+++.+++.++..+.-- + ......+.|||.+|++|++
T Consensus 199 d~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e-~-~yw~~gsrpnle~Yf~rvr 276 (325)
T KOG4420|consen 199 DVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE-K-KYWEDGSRPNLESYFERVR 276 (325)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH-H-HhcccCCCccHHHHHHHHH
Confidence 3344556677788889999999985432368999999999999999999888654211 1 1122357999999999999
Q ss_pred cchhhhhcCCChHHHH
Q 037448 93 ADAAVKDVMPETDKLA 108 (118)
Q Consensus 93 ~~p~v~~~~~~~~~~~ 108 (118)
++++++++.++.-..+
T Consensus 277 rR~sf~kvlg~~fnil 292 (325)
T KOG4420|consen 277 RRFSFRKVLGDIFNIL 292 (325)
T ss_pred hhhHHHHhhhhHHHHH
Confidence 9999999887654443
No 55
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.05 E-value=1.3e-09 Score=74.31 Aligned_cols=107 Identities=15% Similarity=0.271 Sum_probs=80.2
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCeecCCCCChhHHHHHHHHHHHHHHHHh-ccccccCCC
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVK-CSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKI-NEVKLLDEV 79 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~-~~~~~~~~~ 79 (118)
|..|...+..+.+..-+...+.+.+.+..|+..|+. + +++|+.||++|+||+.+.|=+..+.....+ .++++ ++
T Consensus 106 F~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~--~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~I--P~ 181 (221)
T KOG1422|consen 106 FAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPS--RRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEI--PA 181 (221)
T ss_pred HHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCcc--CCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCC--ch
Confidence 334444434434434444556778888999999985 3 689999999999999999988766654333 35554 68
Q ss_pred CCchHHHHHHHHhcchhhhhcCCChHHHHHHHh
Q 037448 80 KTPGLLKWAERFCADAAVKDVMPETDKLAKLRA 112 (118)
Q Consensus 80 ~~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 112 (118)
.++.+.+|++.+.++.++..+.+..+.+...|.
T Consensus 182 ~lt~V~rYl~~~ya~d~F~~tcp~d~ei~~~y~ 214 (221)
T KOG1422|consen 182 SLTGVWRYLKNAYARDEFTNTCPADQEIILAYA 214 (221)
T ss_pred hhhHHHHHHHHHHhHHHhhcCCchHHHHHHhhh
Confidence 999999999999999999999987777655443
No 56
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.04 E-value=1.4e-09 Score=66.29 Aligned_cols=67 Identities=22% Similarity=0.399 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHH
Q 037448 14 AEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERF 91 (118)
Q Consensus 14 ~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~ 91 (118)
++..+...+++.+.+..+|+.|+ +++| +++|+|||++++.+.|+.... .+... .+++|+|.+|++||
T Consensus 32 ~~~~~~~~~~~~~~l~~le~~L~----~~~~---d~~TlADi~l~~~l~~~~~~~--~~~~~--~~~~p~l~~w~~rm 98 (98)
T cd03205 32 QPWLERQRGKIERALDALEAELA----KLPL---DPLDLADIAVACALGYLDFRH--PDLDW--RAAHPALAAWYARF 98 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhh----hCCC---CCCCHHHHHHHHHHHHHHhHc--cCcch--hhhChHHHHHHHhC
Confidence 34455567788999999999998 5777 999999999999988775321 12211 36899999999986
No 57
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.01 E-value=1.4e-09 Score=71.27 Aligned_cols=64 Identities=28% Similarity=0.343 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 22 EQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 22 ~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
+.+.+.++..-+.+.+ +++|++|+++|+|||++++.+..+... .+.. |..++|+|.+|++||.+
T Consensus 82 ~~L~~a~~~w~~~~~~---~~~FlaGd~ptIADisvyg~l~s~e~~---~~~~--Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 82 EWLYDALNTWVAALGK---DRQFHGGSKPNLADLAVYGVLRSVEGH---PAFK--DMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHhcC---CCCccCCCCCCHHHHHHHHHHHHHHHh---cccc--chhhCcCHHHHHHHHHH
Confidence 3344444443333443 578999999999999999887544332 2330 34689999999999986
No 58
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.00 E-value=1.1e-09 Score=70.09 Aligned_cols=71 Identities=23% Similarity=0.170 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHH-hccccccCCCCCchHHHHHHHHh
Q 037448 17 KKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEK-INEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 17 ~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
.++..+.+.+.++.|+..|+ +++||+||++|.+|+++++.+.++..... ....... ..+||+|.+|++||.
T Consensus 55 ~ee~~~~~~~~l~aLs~~Lg----~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~-~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 55 LDQVIEEVDQCCQALSQRLG----TQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEK-VKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHH-HHhCcHHHHHHHhcC
Confidence 34556777889999999999 68999999999999999998766542200 0011111 368999999999973
No 59
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.98 E-value=1.1e-09 Score=71.03 Aligned_cols=73 Identities=22% Similarity=0.240 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHH-hccccccCCCCCchHHHHHHHHhc
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEK-INEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
..++..+++.+.++.||+.|+ +++||+||++|.+|+.+++.+..+..... ...... ...++|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~----~~~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~-~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLG----ESQFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQN-HLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHC----CCCcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHH-HHHHCcHHHHHHHHHHH
Confidence 455567778889999999998 68999999999999999988754432110 001111 13689999999999975
No 60
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=7.5e-09 Score=72.28 Aligned_cols=81 Identities=22% Similarity=0.275 Sum_probs=64.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHh
Q 037448 13 GAEAKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFC 92 (118)
Q Consensus 13 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~ 92 (118)
+....+...+++.+.++.+|..|. ++.|+.|+++|+||+.+.+.+..+.. ... .. .+..++|++.+|++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~e~~l~----~~~yl~g~~~tlADl~~~~~~~~~~~-~~~-~~--~~~~~~p~v~~W~~~~~ 198 (226)
T KOG0867|consen 127 NPTAVKELEAKLRKALDNLERFLK----TQVYLAGDQLTLADLSLASTLSQFQG-KFA-TE--KDFEKYPKVARWYERIQ 198 (226)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHc----cCCcccCCcccHHHHHHhhHHHHHhH-hhh-hh--hhhhhChHHHHHHHHHH
Confidence 344556677889999999999999 68999999999999999998876632 111 11 22479999999999999
Q ss_pred cchhhhhcC
Q 037448 93 ADAAVKDVM 101 (118)
Q Consensus 93 ~~p~v~~~~ 101 (118)
++|+.++..
T Consensus 199 ~~P~~~e~~ 207 (226)
T KOG0867|consen 199 KRPAYEEAN 207 (226)
T ss_pred hCccHHHHH
Confidence 999987754
No 61
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=1.1e-08 Score=70.42 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
........+..+++.|+++ ++.|++||++|+||++++..+..+... ...+. .+.+|+|.++.+|+.++|.+++
T Consensus 124 ~~Pa~~~~~~~~~~~L~~~--~sgflvGd~lT~aDl~i~e~l~~l~~~---~~~~~--~~~~P~L~a~~~kv~~~p~ik~ 196 (206)
T KOG1695|consen 124 YLPAKPKYFKILEKILKKN--KSGFLVGDKLTWADLVIAEHLDTLEEL---LDPSA--LDHFPKLKAFKERVSSIPNIKK 196 (206)
T ss_pred hccchHHHHHHHHHHHHhC--CCCeeecCcccHHHHHHHHHHHHHHHh---cCchh--hccChHHHHHHHHHhcCchHHH
Confidence 3445678899999999865 668999999999999999876544331 11122 3678999999999999999998
Q ss_pred cCC
Q 037448 100 VMP 102 (118)
Q Consensus 100 ~~~ 102 (118)
++.
T Consensus 197 ~i~ 199 (206)
T KOG1695|consen 197 YLE 199 (206)
T ss_pred HHh
Confidence 753
No 62
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=8e-09 Score=69.16 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhhcCC
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKDVMP 102 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~~~~ 102 (118)
-+-++|..||+.|+.+ .|.|-+||++|+||+++.|.+.-...+ .+ |...||.+.+-.+++.+.|+++.+.|
T Consensus 136 ~ItkGF~ALEklL~~~--aGkycvGDevtiADl~L~pqv~nA~rf----~v---dl~PYPti~ri~e~l~elpaFq~ahP 206 (217)
T KOG0868|consen 136 FITKGFTALEKLLKSH--AGKYCVGDEVTIADLCLPPQVYNANRF----HV---DLTPYPTITRINEELAELPAFQAAHP 206 (217)
T ss_pred HHHHhHHHHHHHHHHc--cCCcccCceeehhhhccchhhhhhhhc----cc---cCCcCchHHHHHHHHHhCHHHHhcCC
Confidence 3679999999999987 689999999999999999987543322 22 34889999999999999999999887
Q ss_pred C
Q 037448 103 E 103 (118)
Q Consensus 103 ~ 103 (118)
+
T Consensus 207 ~ 207 (217)
T KOG0868|consen 207 D 207 (217)
T ss_pred C
Confidence 5
No 63
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.86 E-value=2.8e-09 Score=73.42 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCc-hHHHHHHHHhcchhh
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTP-GLLKWAERFCADAAV 97 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~w~~r~~~~p~v 97 (118)
+..+.+.+.++.+|+.|+ +++|++| ++|+||+++++.+.|+... .+ ..+| +|.+|++||.+++.+
T Consensus 141 ~~~~~~~~~l~~le~~L~----~~~~l~g-~~TiADi~l~~~l~~~~~~---~~------~~~p~~l~~w~~Ri~ar~~~ 206 (209)
T TIGR02182 141 GLLEEINADLEELDKLID----GPNAVNG-ELSEDDILVFPLLRNLTLV---AG------INWPSRVADYLDNMSKKSKV 206 (209)
T ss_pred HHHHHHHHHHHHHHHHHh----CccccCC-CCCHHHHHHHHHhcCeeee---cC------CCCChHHHHHHHHHHHHhCC
Confidence 456678889999999998 6889855 6999999999887665321 11 1367 999999999998876
Q ss_pred h
Q 037448 98 K 98 (118)
Q Consensus 98 ~ 98 (118)
.
T Consensus 207 ~ 207 (209)
T TIGR02182 207 P 207 (209)
T ss_pred C
Confidence 3
No 64
>PLN02907 glutamate-tRNA ligase
Probab=98.69 E-value=4.6e-08 Score=78.15 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchh
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAA 96 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~ 96 (118)
++.+.++.||+.|+ +++||+|+++|+||+++++.+..+.. . ...... ...||+|.+|+++|.++|+
T Consensus 94 ~l~~~L~~LE~~L~----~rtYLvGd~lTLADIaL~~~L~~~~~-~-~~~~~~--~~~yPnL~RW~erI~arPs 159 (722)
T PLN02907 94 EFENACEYVDGYLA----SRTFLVGYSLTIADIAIWSGLAGSGQ-R-WESLRK--SKKYQNLVRWFNSISAEYS 159 (722)
T ss_pred HHHHHHHHHHHHhc----cCCeecCCCCCHHHHHHHHHHHhhhh-h-hhcccc--cccCHHHHHHHHHHHhCCC
Confidence 34567888999998 67899999999999999987644310 0 011111 3689999999999999999
No 65
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=98.22 E-value=9.8e-07 Score=62.42 Aligned_cols=67 Identities=27% Similarity=0.275 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhc-cc-cccCCCCCchHHHHHHHHhc
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKIN-EV-KLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~-~~-~~~~~~~~P~l~~w~~r~~~ 93 (118)
..+.+++-|..++..|+ +++||.||++|-+|+.++..+..+.. .+. .. +++ .+++|+|..|++|+++
T Consensus 204 i~ell~rDlr~i~~~Lg----~KkflfGdkit~~DatvFgqLa~v~Y--P~~~~i~d~l-e~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 204 IDELLHRDLRAISDYLG----DKKFLFGDKITPADATVFGQLAQVYY--PFRSHISDLL-EGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHhC----CCccccCCCCCcceeeehhhhhheec--cCCCcHHHHH-hhhchHHHHHHHHHHH
Confidence 55667899999999999 78999999999999999988754432 111 11 333 4789999999999998
No 66
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.76 E-value=0.00014 Score=45.58 Aligned_cols=69 Identities=19% Similarity=0.196 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVKD 99 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~~ 99 (118)
..+.+.+.+...+..|.. +++|++| +.|+||..+.+++.++... |. +--+.+..|.++.-++|+|++
T Consensus 44 a~~~a~kL~~~a~~ll~~---g~~~LFG-ewsIAD~dlA~ml~Rl~~~----gd-----~vP~~l~~Ya~~qwqrpsVQ~ 110 (117)
T PF14834_consen 44 AQAAAQKLIAVAERLLAD---GGPNLFG-EWSIADADLALMLNRLVTY----GD-----PVPERLADYAERQWQRPSVQR 110 (117)
T ss_dssp HHHHHHHHHHHHHHHTTT-----SSTTS-S--HHHHHHHHHHHHHHTT----T---------HHHHHHHHHHHT-HHHHH
T ss_pred HHHHHHHHHHHHHHHhcc---CCCCccc-cchHHHHHHHHHHHHHHHc----CC-----CCCHHHHHHHHHHHCCHHHHH
Confidence 344556666777777775 6889888 6999999999998776432 22 235689999999999999987
Q ss_pred cC
Q 037448 100 VM 101 (118)
Q Consensus 100 ~~ 101 (118)
.+
T Consensus 111 Wl 112 (117)
T PF14834_consen 111 WL 112 (117)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 67
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=97.57 E-value=0.00028 Score=50.78 Aligned_cols=63 Identities=21% Similarity=0.329 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhc
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCA 93 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~ 93 (118)
.+.++++.--..|++ +.+|++|++|++||+.++..+.-+.....+. +++ .-..+..|+-||..
T Consensus 292 ~lydA~d~Wvaalgk---nr~flGG~kPnLaDLsvfGvl~sm~gc~afk--d~~---q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 292 HLYDAADQWVAALGK---NRPFLGGKKPNLADLSVFGVLRSMEGCQAFK--DCL---QNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHHHHHHhCC---CCCccCCCCCchhhhhhhhhhhHhhhhhHHH--HHH---hcchHHHHHHHHHH
Confidence 344444444444554 7999999999999999999886554433222 222 35689999999876
No 68
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.49 E-value=0.0005 Score=44.34 Aligned_cols=66 Identities=18% Similarity=0.194 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhh
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAV 97 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v 97 (118)
+...++...|..||..+. .... .+.++|+-||.++|.+.-+ ....|+. =-|++.+|+++|.+...|
T Consensus 59 ~~i~~l~~~L~~Le~ll~----~~~~-~n~~LS~dDi~lFp~LR~L---tivkgi~-----~P~~V~~Y~~~~s~~t~V 124 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLA----SPNA-VNGELSIDDIILFPILRSL---TIVKGIQ-----WPPKVRAYMDRMSKATGV 124 (132)
T ss_dssp HHHHHHHHHHHHHHHH-S----CTTB-TTSS--HHHHHHHHHHHHH---CTCTTS--------HHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHhc----cccc-cCCCCCHHHHHHHHHHhhh---hhccCCc-----CCHHHHHHHHHHHHHcCC
Confidence 456677788888888877 2333 3449999999999987543 2223432 257899999999986655
No 69
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.41 E-value=0.00022 Score=49.12 Aligned_cols=73 Identities=23% Similarity=0.227 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhcccccc-CCCCCchHHHHHHHHhc
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLL-DEVKTPGLLKWAERFCA 93 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~-~~~~~P~l~~w~~r~~~ 93 (118)
..++..+++.+.++.|+..|+ ..+||.|++|+=+|..++..+--+.+.. ..+..+- ..++|++|-+++.|+.+
T Consensus 174 ~~DqVie~vdkc~~aLsa~L~----~q~yf~g~~P~elDAlvFGHlytilTt~-Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 174 TMDQVIEQVDKCCRALSAQLG----SQPYFTGDQPTELDALVFGHLYTILTTR-LPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred cHHHHHHHHHHHHHHHHHHhc----CCCccCCCCccHHHHHHHhhhHHhhhhc-CCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 456677888889999999998 6899999999999999987663332211 1111110 03789999999999887
No 70
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.28 E-value=0.0017 Score=41.69 Aligned_cols=66 Identities=21% Similarity=0.184 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhh
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAV 97 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v 97 (118)
+..+++...|..++..+.. .. ..+.++|+-||.++|.+.-+.. ..|.. =-|++..|+++|.+...|
T Consensus 60 ~~i~~l~~~L~~l~~ll~~----~~-~~n~~ls~DDi~lFp~LR~Lt~---vkgi~-----~P~~V~~Y~~~~s~~t~V 125 (128)
T cd03199 60 QYIAALNALLEELDPLILS----SE-AVNGQLSTDDIILFPILRNLTL---VKGLV-----FPPKVKAYLERMSALTKV 125 (128)
T ss_pred HHHHHHHHHHHHHHHHHcC----cc-ccCCcCCHHHHHHHHHHhhhhh---hcCCC-----CCHHHHHHHHHHHHHhCC
Confidence 3455666777777777752 22 3456899999999998864432 23432 246899999999986544
No 71
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.95 E-value=0.003 Score=45.91 Aligned_cols=73 Identities=23% Similarity=0.251 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccC-CCCCchHHHHHHHHhc
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLD-EVKTPGLLKWAERFCA 93 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~-~~~~P~l~~w~~r~~~ 93 (118)
..++......+++..|++.|+ .+.||+||++|-.|..++..+..+..++. .+..+.. ...+|||.++.++++.
T Consensus 160 ~e~~i~~~Aska~~~LS~~Lg----s~kffFgd~psslDa~lfs~la~~~~~~L-p~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 160 REDQIYKDASKALNLLSTLLG----SKKFFFGDKPSSLDALLFSYLAILLQVAL-PNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred hHHHHHHHHHHHHHHHHHHhc----CceEeeCCCCchHHHHHHHHHHHHHhccC-CchhHHHHHHhcchHHHHHHHHHH
Confidence 344456667889999999998 68999999999999999987754322211 1111100 1349999999999886
No 72
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=90.98 E-value=0.95 Score=30.31 Aligned_cols=37 Identities=30% Similarity=0.368 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhhccCCCCCeecCCC-CChhHHHHHHHH
Q 037448 24 LIEVLVLLEDAFVKCSKGKPFFGGNQ-IGFLDIAFGSYL 61 (118)
Q Consensus 24 ~~~~l~~le~~L~~~~~~~~~~~G~~-~s~aDi~l~~~~ 61 (118)
..+.+..|++.|+... +..|+.|+. +|-+|+.++..+
T Consensus 113 a~~~l~~L~~~L~~~~-~~~~~f~~~~psslD~L~~ayL 150 (168)
T PF11801_consen 113 AMECLSLLEELLGEWE-EARYFFGDSKPSSLDCLAFAYL 150 (168)
T ss_pred HHHHHHHHHHHHhhcc-ccccccCCCCCCHHHHHHHHHH
Confidence 4578888999998310 127888877 999999999655
No 73
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=87.64 E-value=0.47 Score=37.54 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHH
Q 037448 24 LIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAE 89 (118)
Q Consensus 24 ~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~ 89 (118)
+...+..++..|. -..|++|.++|+||++++..+.-- .. .+..+-....+-++.+|+.
T Consensus 93 ~s~~~~~ld~~l~----~~t~lvg~sls~Ad~aiw~~l~~n-~~---~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 93 ISSSLSELDKFLV----LRTFLVGNSLSIADFAIWGALHSN-GM---RQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred HHHHHHHHHhhhh----HHHHhhccchhHHHHHHHHHHhcc-cc---hHHHHHhhCCchhhhhhcC
Confidence 4456666777766 467999999999999999776311 00 0000100235667788877
No 74
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=84.73 E-value=3.3 Score=28.33 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCc-hHHHHHHHHhcchhh
Q 037448 20 AIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTP-GLLKWAERFCADAAV 97 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~w~~r~~~~p~v 97 (118)
..+++...++.+++.+.. .+ -....+++=||.++|++.-+. ...|. ++| ++..|+.+|.+...|
T Consensus 143 ~~~~i~~dl~~l~~Li~~---~s--~~n~~l~~ddi~vFplLRnlt---~v~gi------~wps~v~dy~~~msektqV 207 (215)
T COG2999 143 YLKRIQADLRALDKLIVG---PS--AVNGELSEDDILVFPLLRNLT---LVAGI------QWPSRVADYRDNMSEKTQV 207 (215)
T ss_pred HHHHHHHHHHHHHHHhcC---cc--hhccccchhhhhhhHHhccce---ecccC------CCcHHHHHHHHHHHHhhCc
Confidence 345566777778887763 12 234569999999999886442 22233 233 699999999986554
No 75
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=71.87 E-value=4.7 Score=28.47 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHHHHHHHHHhccccccCCCCCchHHHHHHHHhcchhhh
Q 037448 25 IEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLGWLRVTEKINEVKLLDEVKTPGLLKWAERFCADAAVK 98 (118)
Q Consensus 25 ~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~~~~~~~~~~~~P~l~~w~~r~~~~p~v~ 98 (118)
..+++.++..|. +..|..|.+++=.|+.++..+. .-+. ...+++..+|+..+...-...
T Consensus 10 ~~glk~l~~sLA----~ks~~~g~~~s~edv~vf~al~---------~ep~--s~~~v~~~~w~~~l~a~~~~~ 68 (231)
T KOG1668|consen 10 PAGLKKLNKSLA----EKSYIEGYQLSKEDVVVFAALG---------VEPQ--SARLVNAERWYSKLEALLRLL 68 (231)
T ss_pred hhhhhhhhHhhh----cccCCCCCCcccccceeehhcc---------cCcc--hhhhhHHHHHHHHHHHHHHHH
Confidence 467888999999 6889999999999999885431 1111 357889999998887765554
No 76
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=46.66 E-value=21 Score=23.25 Aligned_cols=28 Identities=21% Similarity=0.525 Sum_probs=18.5
Q ss_pred CchHHHHHHHHhcchhhhhcCCChHHHHHHHh
Q 037448 81 TPGLLKWAERFCADAAVKDVMPETDKLAKLRA 112 (118)
Q Consensus 81 ~P~l~~w~~r~~~~p~v~~~~~~~~~~~~~~~ 112 (118)
--.|++|++|+..+|... ..+.+..|+.
T Consensus 111 r~~LqrfL~RV~~hP~L~----~d~~l~~FLE 138 (140)
T cd06891 111 KANLQRWFNRVCSDPILI----RDEELRFFIE 138 (140)
T ss_pred HHHHHHHHHHHhCChhhc----cCHHHHHHhc
Confidence 346899999999999543 3344444443
No 77
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=37.65 E-value=57 Score=24.07 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHH
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYL 61 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~ 61 (118)
++.+.+..||..-.+. +..-..|.++|+||+....-.
T Consensus 73 ~L~~~~~~Le~ik~~~--~~~~~~~~~vS~ADLivLaG~ 109 (297)
T cd08200 73 ELAKVLAVLEGIQKEF--NESQSGGKKVSLADLIVLGGC 109 (297)
T ss_pred HHHHHHHHHHHHHHHh--cccccCCccccHHHHHHHHhH
Confidence 3666777777665432 111235668999999766443
No 78
>PF12972 NAGLU_C: Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; InterPro: IPR024732 Alpha-N-acetylglucosaminidase is a lysosomal enzyme required for the stepwise degradation of heparan sulphate []. Mutations on the alpha-N-acetylglucosaminidase (NAGLU) gene can lead to Mucopolysaccharidosis type IIIB (MPS IIIB, or Sanfilippo syndrome type B) characterised by neurological dysfunction but relatively mild somatic manifestations []. The structure shows that the enzyme is composed of three domains. This C-terminal domain has an all alpha helical fold [].; PDB: 2VC9_A 2VCC_A 2VCB_A 2VCA_A 4A4A_A.
Probab=37.56 E-value=65 Score=23.19 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=26.0
Q ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 037448 4 ALRDIGSANGAEAKKAAIEQLIEVLVLLEDAFVK 37 (118)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~ 37 (118)
.+...+.+++.+..+...+++.+.+..+|..|+.
T Consensus 112 ~~~~ay~~~d~~~~~~~~~~~l~ll~dlD~lL~t 145 (267)
T PF12972_consen 112 QLVDAYNSKDIEAFKALSARFLELLDDLDRLLAT 145 (267)
T ss_dssp HHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 4455666767777777888889999999999985
No 79
>PF10414 CysG_dimeriser: Sirohaem synthase dimerisation region; InterPro: IPR019478 Bacterial sulphur metabolism depends on the iron-containing porphinoid sirohaem. CysG is a multi-functional enzyme with S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase, dehydrogenase and ferrochelatase activities. CysG synthesizes sirohaem from uroporphyrinogen III via reactions which encompass two branchpoint intermediates in tetrapyrrole biosynthesis, diverting flux first from protoporphyrin IX biosynthesis and then from cobalamin (vitamin B12) biosynthesis. CysG is a dimer. Its dimerisation region is 74 residues long, and acts to hold the two structurally similar protomers held together asymmetrically through a number of salt-bridges across complementary residues within the dimerisation region []. CysG dimerisation produces a series of active sites, accounting for CysG's multi-functionality, catalysing four diverse reactions: Two SAM-dependent methylations NAD+-dependent tetrapyrrole dehydrogenation Metal chelation ; GO: 0006779 porphyrin-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1PJT_A 1PJS_A 1PJQ_A.
Probab=31.65 E-value=90 Score=16.74 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=7.3
Q ss_pred chhhhhcCCChHHHHHHH
Q 037448 94 DAAVKDVMPETDKLAKLR 111 (118)
Q Consensus 94 ~p~v~~~~~~~~~~~~~~ 111 (118)
++.|+..+++...-..||
T Consensus 14 R~~Vk~~l~~~~~RR~FW 31 (60)
T PF10414_consen 14 RERVKQRLPDFAERRRFW 31 (60)
T ss_dssp HHHHHHH-SSHHHHHHHH
T ss_pred HHHHHHHCCCchHHHHHH
Confidence 344444444444433333
No 80
>PHA02975 hypothetical protein; Provisional
Probab=26.10 E-value=1.3e+02 Score=17.08 Aligned_cols=27 Identities=15% Similarity=0.221 Sum_probs=17.4
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVL 28 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l 28 (118)
+.+.++++.++++++.++..+-++..|
T Consensus 5 YaaiFGvFmsS~DdDF~nFI~vVksVL 31 (69)
T PHA02975 5 FTGTYGVFLESNDSDFEDFIDTIMHVL 31 (69)
T ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHH
Confidence 456777888878777765555444433
No 81
>PHA00728 hypothetical protein
Probab=25.77 E-value=1.9e+02 Score=18.54 Aligned_cols=17 Identities=29% Similarity=0.212 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHhh
Q 037448 20 AIEQLIEVLVLLEDAFV 36 (118)
Q Consensus 20 ~~~~~~~~l~~le~~L~ 36 (118)
..+++++.+..||..+.
T Consensus 13 eneelkkkla~leal~n 29 (151)
T PHA00728 13 ENEELKKKLAELEALMN 29 (151)
T ss_pred hHHHHHHHHHHHHHHHc
Confidence 34456666666666654
No 82
>PF12575 DUF3753: Protein of unknown function (DUF3753); InterPro: IPR009175 This group represents an uncharacterised conserved protein belonging to poxvirus family I2.
Probab=25.26 E-value=1.4e+02 Score=17.23 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=18.8
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLV 29 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 29 (118)
..+.++++.+.++++.++..+.++..|.
T Consensus 5 yaaifGvFmss~ddDf~~Fi~vVksVlt 32 (72)
T PF12575_consen 5 YAAIFGVFMSSSDDDFNNFINVVKSVLT 32 (72)
T ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHHHc
Confidence 3466777878788887766666555544
No 83
>PRK15371 effector protein YopJ; Provisional
Probab=24.81 E-value=1.2e+02 Score=22.31 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHH
Q 037448 19 AAIEQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLG 62 (118)
Q Consensus 19 ~~~~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~ 62 (118)
...+++...+..||..++ +|.++ -..++..|+-..|.+.
T Consensus 23 ~~~~~L~~~i~~le~~~~----~G~~~-~~~~~~~Di~~lp~lv 61 (287)
T PRK15371 23 ISNEELKNIITQLEDDIA----DGSWI-HKNYARTDLEVMPALV 61 (287)
T ss_pred hhHHHHHHHHHHHHHHHH----cCCCC-CchhHHhhHHhhHHHH
Confidence 356778999999999998 56665 5678999999998774
No 84
>PHA02776 E7 protein; Provisional
Probab=23.79 E-value=26 Score=21.58 Aligned_cols=14 Identities=21% Similarity=0.380 Sum_probs=11.8
Q ss_pred ecCCCCChhHHHHH
Q 037448 45 FGGNQIGFLDIAFG 58 (118)
Q Consensus 45 ~~G~~~s~aDi~l~ 58 (118)
+.|+++|+-||++-
T Consensus 1 M~G~~pTl~DIvL~ 14 (101)
T PHA02776 1 MHGKHPTLKDIVLD 14 (101)
T ss_pred CCCCCCcHhHeeee
Confidence 46899999999983
No 85
>PF03421 YopJ: YopJ Serine/Threonine acetyltransferase; InterPro: IPR005083 The infection of mammalian host cells by Yersinia sp. causes a rapid induction of the mitogen-activated protein kinase (MAPK; including the ERK, JNK and p38 pathways) and nuclear factor kappaB (NF-kappaB) signalling pathways that would typically result in cytokine production and initiation of the innate immune response. However, these pathways are rapidly inhibited promoting apoptosis. YopJ has been shown to block phosphorylation of active site residues []. It has also been shown that YopJ acetyltransferase is activated by eukaryotic host cell inositol hexakisphosphate []. Serine and threonine acetylation is yet another complication to the control of signalling pathways and may be a may be a widespread mode of biochemical regulation of endogenous processes in eukaryotic cells. It has been shown that YopJ is a serine/threonine acetyltransferase []. It acetylates the serine and threonine residues in the phosphorylation sites of MAPK kinases and nuclear factor kappaB, preventing their activation by phosphorylation and the inhibition of these signalling pathways []. This entry contains YopJ and related proteins.
Probab=23.48 E-value=1.5e+02 Score=19.96 Aligned_cols=36 Identities=28% Similarity=0.219 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHHH
Q 037448 22 EQLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYLG 62 (118)
Q Consensus 22 ~~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~~ 62 (118)
+.+..+...++..++ ++.++ ...++-.|+.+.|.+.
T Consensus 2 ~~L~~y~~~~~~~~~----~g~~~-~~~~~~~D~~~lp~lv 37 (177)
T PF03421_consen 2 ESLKEYIERLEDDIK----NGSWP-NESYAELDIKMLPALV 37 (177)
T ss_pred hHHHHHHHHHHHHHH----hCCCC-CcchhhhhHHHHHHHH
Confidence 346778888888888 56666 7789999999998874
No 86
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=22.49 E-value=1.4e+02 Score=15.96 Aligned_cols=28 Identities=14% Similarity=0.175 Sum_probs=17.4
Q ss_pred HHHHHHHHhhccCCCCCeecCCCC-ChhHHHHH
Q 037448 27 VLVLLEDAFVKCSKGKPFFGGNQI-GFLDIAFG 58 (118)
Q Consensus 27 ~l~~le~~L~~~~~~~~~~~G~~~-s~aDi~l~ 58 (118)
..+.|.+.+. .+.|-.|+.+ |..+++--
T Consensus 5 i~~~l~~~I~----~g~~~~g~~lps~~~la~~ 33 (64)
T PF00392_consen 5 IYDQLRQAIL----SGRLPPGDRLPSERELAER 33 (64)
T ss_dssp HHHHHHHHHH----TTSS-TTSBE--HHHHHHH
T ss_pred HHHHHHHHHH----cCCCCCCCEeCCHHHHHHH
Confidence 3445555566 5778888888 88887654
No 87
>PHA02650 hypothetical protein; Provisional
Probab=22.41 E-value=1.6e+02 Score=17.25 Aligned_cols=27 Identities=15% Similarity=0.190 Sum_probs=18.1
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVL 28 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l 28 (118)
+.+.++++.++++++.++..+-++..|
T Consensus 5 YaaiFGVFmsS~DdDFnnFI~VVkSVL 31 (81)
T PHA02650 5 YAAIFGVFMSSTDDDFNNFIDVVKSVL 31 (81)
T ss_pred HHHHHhhhcCCcHHHHHHHHHHHHHHH
Confidence 456777888878878766666554444
No 88
>PHA02844 putative transmembrane protein; Provisional
Probab=22.25 E-value=1.7e+02 Score=16.98 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=17.9
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVL 28 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l 28 (118)
+.+.++++.++++++.++..+-++..|
T Consensus 5 YaaiFGVFmsS~DdDFnnFI~vVksVL 31 (75)
T PHA02844 5 YTAIFGVFLSSENEDFNNFIDVVKSVL 31 (75)
T ss_pred HHHHHhhhcCCchHHHHHHHHHHHHHH
Confidence 456777888878877766665554444
No 89
>KOG4095 consensus Uncharacterized conserved protein (tumor-specific protein BCL7 in humans) [General function prediction only]
Probab=22.13 E-value=1.4e+02 Score=19.80 Aligned_cols=26 Identities=15% Similarity=0.225 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCe
Q 037448 16 AKKAAIEQLIEVLVLLEDAFVKCSKGKPF 44 (118)
Q Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~~~~~~~ 44 (118)
.+-.+++.+++.|+.||+.-.. ++.|
T Consensus 10 TRsRAKDDIKkVMaaiEKVRrW---EKKw 35 (165)
T KOG4095|consen 10 TRSRAKDDIKKVMAAIEKVRRW---EKKW 35 (165)
T ss_pred hhhhhHHHHHHHHHHHHHHHHH---hhhe
Confidence 3444678899999999998765 5667
No 90
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as dihydroxyacetone phosphate acyltransferase (DHAPAT, also known as 1 glycerol-3-phosphate O-acyltransferase 1) and similar proteins.
Probab=21.72 E-value=1.8e+02 Score=19.65 Aligned_cols=20 Identities=20% Similarity=0.423 Sum_probs=16.3
Q ss_pred CCe-ecCCCCChhHHHHHHHH
Q 037448 42 KPF-FGGNQIGFLDIAFGSYL 61 (118)
Q Consensus 42 ~~~-~~G~~~s~aDi~l~~~~ 61 (118)
+++ ++.++.|+.|+.+...+
T Consensus 22 ~~~i~v~NH~S~lD~~~l~~~ 42 (205)
T cd07993 22 HPVVLLPTHRSYLDFLLLSFI 42 (205)
T ss_pred CCEEEEecCcchhHHHHHHHH
Confidence 555 78899999999888654
No 91
>PHA02819 hypothetical protein; Provisional
Probab=21.36 E-value=1.8e+02 Score=16.69 Aligned_cols=29 Identities=17% Similarity=0.126 Sum_probs=19.7
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVLVL 30 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 30 (118)
+.+.++++.++++++.++..+-++..|..
T Consensus 5 YaaiFGvFmsS~DdDFnnFI~VVksVLtd 33 (71)
T PHA02819 5 YSAIFGVFMSSSDDDFNNFINVVKSVLNN 33 (71)
T ss_pred HHHHHHhhhCCchhHHHHHHHHHHHHHcC
Confidence 35667788887888887666665555543
No 92
>PF03791 KNOX2: KNOX2 domain ; InterPro: IPR005541 The MEINOX region is comprised of two domains, KNOX1 and KNOX2. KNOX1 plays a role in suppressing target gene expression. KNOX2, essential for function, is thought to be necessary for homo-dimerization [].; GO: 0003677 DNA binding, 0005634 nucleus
Probab=21.12 E-value=1.5e+02 Score=15.86 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=17.7
Q ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhh
Q 037448 5 LRDIGSANGAEAKKAAIEQLIEVLVLLEDAFV 36 (118)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~ 36 (118)
+..++.. -+++..+..++....+..+|.+|.
T Consensus 18 Yc~~L~k-ykeeL~~p~~EA~~f~~~ie~qL~ 48 (52)
T PF03791_consen 18 YCDMLVK-YKEELQRPFQEAMEFCREIEQQLS 48 (52)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444433 445555555666666777777765
No 93
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=20.95 E-value=1.2e+02 Score=25.32 Aligned_cols=37 Identities=24% Similarity=0.287 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCeecCCCCChhHHHHHHHH
Q 037448 23 QLIEVLVLLEDAFVKCSKGKPFFGGNQIGFLDIAFGSYL 61 (118)
Q Consensus 23 ~~~~~l~~le~~L~~~~~~~~~~~G~~~s~aDi~l~~~~ 61 (118)
.+...++.||..-++. +..--.|.++|+||+....-.
T Consensus 498 ~L~~vl~~LE~Ik~~f--~~~~~~~~~vS~ADLivLaG~ 534 (726)
T PRK15061 498 QLAKVLAVLEGIQAEF--NAAQSGGKKVSLADLIVLGGN 534 (726)
T ss_pred HHHHHHHHHHHHHHHH--hhccCCCCceeHHHHHHHHHH
Confidence 5666777777765432 122234567999999765443
No 94
>PHA02692 hypothetical protein; Provisional
Probab=20.28 E-value=1.9e+02 Score=16.56 Aligned_cols=27 Identities=11% Similarity=0.095 Sum_probs=17.1
Q ss_pred hhHHHHHhhcCCHHHHHHHHHHHHHHH
Q 037448 2 FSALRDIGSANGAEAKKAAIEQLIEVL 28 (118)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l 28 (118)
+.+.++++.++++++.++..+-++..|
T Consensus 5 yaaifGVFmss~DdDF~~Fi~vVksVL 31 (70)
T PHA02692 5 YAGVFGSFLSNSDEDFEEFLNIVRTVM 31 (70)
T ss_pred HHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 346677887877777765555544443
No 95
>PF07862 Nif11: Nitrogen fixation protein of unknown function; InterPro: IPR012903 This domain is found in the cyanobacteria, and the nitrogen-fixing proteobacterium Azotobacter vinelandii and may be involved in nitrogen fixation, but no role has been assigned [].
Probab=20.23 E-value=1.4e+02 Score=15.14 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=21.2
Q ss_pred hHHHHHHHHhcchhhhh---cCCChHHHHHHHh
Q 037448 83 GLLKWAERFCADAAVKD---VMPETDKLAKLRA 112 (118)
Q Consensus 83 ~l~~w~~r~~~~p~v~~---~~~~~~~~~~~~~ 112 (118)
.+.++++++...|.++. ...+.+.++.+.+
T Consensus 5 ~l~~Fl~~~~~d~~l~~~l~~~~~~~e~~~lA~ 37 (49)
T PF07862_consen 5 SLKAFLEKVKSDPELREQLKACQNPEEVVALAR 37 (49)
T ss_pred HHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHH
Confidence 57788888888888875 2346777776654
Done!