BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037449
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2
Length = 106
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/89 (78%), Positives = 79/89 (88%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MAPKQPNTGLFVGLNKG+IVTKKEL PR +DRKGKTSKR HFVR +IREVAGF PYEKRI
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKK 89
TELLKVGKDKRALKV + K+G + +K++
Sbjct: 61 TELLKVGKDKRALKVRQEKVGHSQESKEE 89
>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A
PE=2 SV=1
Length = 113
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/84 (82%), Positives = 76/84 (90%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
TGLFVGLNKG++VT++EL PR RKGKTSKR F+R +IREVAG APYEKRITELLKVG
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG 67
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
KDKRALKVAKRKLGTHKRAK+KRE
Sbjct: 68 KDKRALKVAKRKLGTHKRAKRKRE 91
>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B
PE=2 SV=1
Length = 112
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 78/91 (85%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
M Q TGLFVGLNKG++VT++EL PR RKGKTSKR F+R +I+EVAG APYEKRI
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
TELLKVGKDKRALKVAKRKLGTHKRAK+KRE
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKRE 91
>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C
PE=3 SV=1
Length = 108
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 76/84 (90%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
TGLFVGLNKG++VTK+E PR +RKGKTSKR F+R +I+EVAG APYEKRITELLKVG
Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
KDKRALKVAKRKLGTHKRAK+KRE
Sbjct: 64 KDKRALKVAKRKLGTHKRAKRKRE 87
>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3
SV=1
Length = 101
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 66/82 (80%)
Query: 10 LFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
+ VGLNKG+ VTKK PR + RKG S+RV VR V+REVAG+APYE+R+ ELLKVGKD
Sbjct: 4 IAVGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKD 63
Query: 70 KRALKVAKRKLGTHKRAKKKRE 91
KRALK+ KRKLGTH R KKKRE
Sbjct: 64 KRALKMCKRKLGTHMRGKKKRE 85
>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36a PE=3 SV=2
Length = 99
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MAP GL VGLNKG ++TK++L R + RKG+ SKR FVR+++REVAGFAPYE+R+
Sbjct: 1 MAP-----GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRV 55
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
EL++ +DKRA K+AK++LGT KRAK K E
Sbjct: 56 MELIRNSQDKRARKLAKKRLGTLKRAKGKIE 86
>sp|Q98TF6|RL36_CHICK 60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1
Length = 105
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKGY VTK +PR R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MAIRYP---MAVGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3
SV=1
Length = 105
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRIGTHIRAKRKRE 88
>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1
Length = 105
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRIGTHIRAKRKRE 88
>sp|Q8UW19|RL36_LAPHA 60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3
SV=1
Length = 105
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MAIRYP---MAVGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q5RAZ9|RL36_PONAB 60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3
Length = 105
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR + R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q9Y3U8|RL36_HUMAN 60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3
Length = 105
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR + R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36b PE=3 SV=1
Length = 99
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%), Gaps = 5/91 (5%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MAP GL VGLNKG +TK++L R + RKG SKR FVR+++REVAGFAPYE+R+
Sbjct: 1 MAP-----GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRV 55
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
EL++ +DKRA K+AK++LGT KRAK K E
Sbjct: 56 MELIRNSQDKRARKLAKKRLGTLKRAKGKIE 86
>sp|Q3T171|RL36_BOVIN 60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3
Length = 105
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR + R+G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MALRYP---MAVGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1
Length = 110
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 61/82 (74%)
Query: 10 LFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
L VGL KG+ VTK E +PR + RKG SK FVR +IREV GFAP+E+R ELLKV KD
Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKD 66
Query: 70 KRALKVAKRKLGTHKRAKKKRE 91
KRALK K++LGTH R K+KR+
Sbjct: 67 KRALKFIKKRLGTHLRGKRKRD 88
>sp|P39032|RL36_RAT 60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2
Length = 105
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR + R+G+ +K FVR +IREV FAPYE+R
Sbjct: 1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q6Q415|RL36_DANRE 60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=3 SV=1
Length = 105
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 62/82 (75%)
Query: 10 LFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
+ VGLNKG+ VTK +P+ + R+G+ +K F R +IREV GFAPYE+R ELLKV KD
Sbjct: 7 MAVGLNKGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKD 66
Query: 70 KRALKVAKRKLGTHKRAKKKRE 91
KRALK K+++GTH RAK+KRE
Sbjct: 67 KRALKFIKKRVGTHIRAKRKRE 88
>sp|Q9HFR7|RL36_TRIHM 60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3
SV=1
Length = 105
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 1 MAPKQP-NTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKR 59
MA + P TGL VGLNKG+ T + ++PR + KG SKR FVR V++EVAG APYE+R
Sbjct: 1 MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERR 60
Query: 60 ITELLKVGKDKRALKVAKRKLGTHKRAKKK-REIYRI 95
+ ELL+ KDKRA K+AK++LGT RAK+K E+ R+
Sbjct: 61 VIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRV 97
>sp|P47964|RL36_MOUSE 60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2
Length = 105
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGLNKG+ VTK +PR + R+ + + FVR +IREV GFAPYE+R
Sbjct: 1 MALRYP---MAVGLNKGHKVTKNVSKPRHSRRRSRLTNHTKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV K KRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKSKRALKFIKKRVGTHIRAKRKRE 88
>sp|Q90YT2|RL36_ICTPU 60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3
SV=1
Length = 105
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 1 MAPKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRI 60
MA + P + VGL KG+ VTK +P+ + R G+ +K FVR +IREV GFAPYE+R
Sbjct: 1 MAIRYP---MAVGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRA 57
Query: 61 TELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK K+++GTH RAK+KRE
Sbjct: 58 MELLKVSKDKRALKFIKKRVGTHIRAKRKRE 88
>sp|P49181|RL36_CAEEL 60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36
PE=1 SV=3
Length = 104
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 61/83 (73%)
Query: 9 GLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGK 68
GL VGLNKG+ T+ ++ R KG SK+ VR ++RE+ GFAPYE+R+ E+L++ K
Sbjct: 8 GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISK 67
Query: 69 DKRALKVAKRKLGTHKRAKKKRE 91
DKRALK KR++GTH+RAK KRE
Sbjct: 68 DKRALKFLKRRIGTHRRAKGKRE 90
>sp|Q24F59|RL36_TETTS 60S ribosomal protein L36 OS=Tetrahymena thermophila (strain
SB210) GN=RPL36 PE=1 SV=1
Length = 104
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 6/90 (6%)
Query: 9 GLFVGLNKGYIVTK--KELQPRSA-DRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLK 65
G VG+NKG+I T+ K+LQ SA RKGK KRV VR VIREV GFAPYEKRI EL+K
Sbjct: 4 GQAVGINKGFITTQLEKKLQKHSAVQRKGKLGKRVALVRQVIREVTGFAPYEKRIIELIK 63
Query: 66 VG--KD-KRALKVAKRKLGTHKRAKKKREI 92
G KD K+A K+A+++LGTH+RAK K+ +
Sbjct: 64 AGSAKDSKKATKIARKRLGTHRRAKVKKAL 93
>sp|Q55AQ9|RL36_DICDI 60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36
PE=3 SV=1
Length = 105
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
+G+ G NKG+ V K+ + S +K +KRV +R VIRE++GF+PYE+R++ELLK G
Sbjct: 12 SGIIKGFNKGHAVAKRTVT--STFKKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSG 69
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
DKRALKVAK++LG+ + KKKR+
Sbjct: 70 LDKRALKVAKKRLGSIQAGKKKRD 93
>sp|O14455|RL36B_YEAST 60S ribosomal protein L36-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36B PE=1 SV=3
Length = 100
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
TG+ +GLNKG VT+ P+ + +KG S R FVR+++RE+AG +PYE+R+ +L++
Sbjct: 5 TGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
+KRA KVAK++LG+ RAK K E
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVE 88
>sp|P0C6E6|RL36X_HUMAN Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5
SV=1
Length = 105
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 10 LFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKD 69
+ VGLNKG+ +TK +PR + G+ +K VR +I+EV GF PYE+ ELLKV KD
Sbjct: 7 MVVGLNKGHKLTKNLSKPRHSRSLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKD 66
Query: 70 KRALKVAKRKLGTHKRAKKKRE 91
K+ALK K+++GTH K+KRE
Sbjct: 67 KQALKFIKKRVGTHIHTKRKRE 88
>sp|P05745|RL36A_YEAST 60S ribosomal protein L36-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36A PE=1 SV=3
Length = 100
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
TG+ +GLNKG VT P+ + +KG S R FVR+++RE+AG +PYE+R+ +L++
Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
+KRA KVAK++LG+ RAK K E
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVE 88
>sp|P49630|RL36_DROME 60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36
PE=3 SV=1
Length = 115
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 10/92 (10%)
Query: 10 LFVGLNKGYIVTKKELQPRSADRKGK----------TSKRVHFVRTVIREVAGFAPYEKR 59
L +GLNKG+ +K + D+K K ++ F+R ++REV G APYEKR
Sbjct: 7 LAIGLNKGHKTSKIRNVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKR 66
Query: 60 ITELLKVGKDKRALKVAKRKLGTHKRAKKKRE 91
ELLKV KDKRALK KR+LGTH RAK+KRE
Sbjct: 67 TMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 98
>sp|P47834|RL36_CANAX 60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1
Length = 99
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 64/84 (76%)
Query: 8 TGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVG 67
+G+ G+NKG T KE+ P+ + RKG +S+R FVR++++EVAG APYE+R+ EL++
Sbjct: 4 SGIAAGVNKGRKTTAKEVAPKISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNA 63
Query: 68 KDKRALKVAKRKLGTHKRAKKKRE 91
+KRA K+AK++LGTHKRA +K E
Sbjct: 64 GEKRAKKLAKKRLGTHKRALRKVE 87
>sp|Q8SRP1|RL36_ENCCU 60S ribosomal protein L36 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL36 PE=1 SV=1
Length = 107
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 33 KGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRA 86
+ +T + V E++G +P EK+ LL+ + +A K+ +++LG+HKRA
Sbjct: 40 RAETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRA 93
>sp|P53863|JJJ1_YEAST J protein JJJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JJJ1 PE=1 SV=1
Length = 590
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 21 TKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKL 80
TK+E+ R + K + R + +TV R V +KR+ E K+ +++R LK +RK
Sbjct: 223 TKREVNRR--NEKARQQARNEYNKTVKRFVVFIKKLDKRMKEGAKIAEEQRKLKEQQRKN 280
Query: 81 GTHKRAK 87
+ R K
Sbjct: 281 ELNNRRK 287
>sp|A7HNQ1|RLMN_FERNB Probable dual-specificity RNA methyltransferase RlmN
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=rlmN PE=3 SV=1
Length = 348
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 2 APKQPNTGLFVGLNKGYIVTKKELQPRSADRKGKTSKRVHFVRTVIREVAGFAPYEKRIT 61
AP + V +NK Y V +E+ + + + T RV F +IRE F +++
Sbjct: 217 APNNYKRDIIVPMNKKYSV--EEIIQSAKEYQKITKNRVTFEYILIREFNDFVDDAEKLA 274
Query: 62 ELLK 65
ELLK
Sbjct: 275 ELLK 278
>sp|Q8TUZ5|ARGD_METKA Acetylornithine aminotransferase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=argD PE=3
SV=1
Length = 389
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 23 KELQPRSADRKGKTSKRV-HFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKL 80
+E P +A+RKGK + R+ V+ EV G + + ++VG D+RA VA+ L
Sbjct: 294 EENLPEAAERKGKLAMRILSEAEDVVEEVRG-----RGLMMGVEVGDDERAKDVAREML 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,756,759
Number of Sequences: 539616
Number of extensions: 1142439
Number of successful extensions: 3715
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3678
Number of HSP's gapped (non-prelim): 43
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)