BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037450
(224 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 60.8 bits (146), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
S DCAICL+ + G+ PC H FHKRC+D WL ++ +CP CR+++
Sbjct: 198 SISDCAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 246
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 149 IAMDLRMA--INNKSNVTRLPEK-------RIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE I E+ C IC + +A+ PC H F
Sbjct: 596 LAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFF 655
Query: 200 HKRCIDFWLEKSRSCPLCRNDLPAS 224
HK C+ WL+KS +CP+CR P +
Sbjct: 656 HKPCVSIWLQKSGTCPVCRRHFPPA 680
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 149 IAMDLRMA--INNKSNVTRLPEK-------RIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE I E+ C IC + +A+ PC H F
Sbjct: 597 LAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFF 656
Query: 200 HKRCIDFWLEKSRSCPLCRNDLPAS 224
HK C+ WL+KS +CP+CR P +
Sbjct: 657 HKPCVSIWLQKSGTCPVCRRHFPPA 681
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 149 IAMDLRMA--INNKSNVTRLPEK-------RIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE I E+ C IC + +A+ PC H F
Sbjct: 597 LAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFF 656
Query: 200 HKRCIDFWLEKSRSCPLCRNDLPAS 224
HK C+ WL+KS +CP+CR P +
Sbjct: 657 HKPCVSIWLQKSGTCPVCRRHFPPA 681
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 168 EKRIESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKSRSCPLCRNDLPAS 224
EK +ES ++CAICL G VV + P C H++H CID WL+ +CP CR DLP S
Sbjct: 122 EKSLES-RECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLPES 178
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 60.5 bits (145), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 149 IAMDLRMA--INNKSNVTRLPEK-------RIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE I E+ C IC + +A+ PC H F
Sbjct: 596 LAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFF 655
Query: 200 HKRCIDFWLEKSRSCPLCRNDLPAS 224
HK C+ WL+KS +CP+CR P +
Sbjct: 656 HKPCVSIWLQKSGTCPVCRRHFPPA 680
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C V QL PC+H FH +C+D WL+ +R
Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 334 TCPICRAD 341
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 169 KRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222
K+ +E +C IC + +V+G PC H FH C+ WL++ SCP+CR++LP
Sbjct: 222 KKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELP 275
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C V QL PC+H FH +C+D WL+ +R
Sbjct: 331 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 390
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 391 TCPICRAD 398
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
S DCAICL+ + G+ PC H FH++C+D WL + +CP CR+++
Sbjct: 286 STSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 140 SNRFRKFVPIAMDLRMAINNKSNVTRLPEKRIESEKDCAICLDGIVVGQLASCTP-CDHV 198
S+RF K +P + + S TR E DC +C DG GQ P C HV
Sbjct: 85 SSRFVKKLP-----QFKFSEPSTYTRY-------ESDCVVCFDGFRQGQWCRNLPGCGHV 132
Query: 199 FHKRCIDFWLEKSRSCPLCR 218
FH++C+D WL K+ +CP+CR
Sbjct: 133 FHRKCVDTWLLKASTCPICR 152
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 58.5 bits (140), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 177 CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
CAICL+ + G+ PC H FHKRC+D WL ++ +CP CR+++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C QL PC+H FH +C+D WL+ +R
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANR 415
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 416 TCPICRAD 423
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 111 MFPQSVRIYTLTKLVVCVLDYF--KRLRTNPSNRFRKFVPIAMDLRMAINN-KSNVTRLP 167
+F SV + +T V ++ +RLR N + RK + D + AI + +
Sbjct: 211 IFFVSVSFFIITAATVGYFIFYSARRLR-NARAQSRKQRQLKADAKKAIGRLQLRTQKQG 269
Query: 168 EKRIESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
+K I + D CA+C++ L C+HVFHK C+D WL + R+CP+C+ D+
Sbjct: 270 DKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTCVDPWLLEHRTCPMCKCDI 324
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 168 EKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCR 218
+K E E C++CL+ + VG++ PC H FH CID WL + +CP+C+
Sbjct: 202 KKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCK 252
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 15/136 (11%)
Query: 98 HLLRLDASGGMPIMFPQSVRIYTLTKLVVCVLDYF---------KRLRTNPSNRFRKFVP 148
HL L +SG Q+ +L + DYF ++L N NR+ P
Sbjct: 140 HLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYG--TP 197
Query: 149 IAMDLRMAINNKSNVTRLPEKRIESE-KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFW 207
A + N+T+ + SE CA+C+D G A PC H++HK C+ W
Sbjct: 198 PASKSAIEALPLVNITK---SNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPW 254
Query: 208 LEKSRSCPLCRNDLPA 223
LE SCP+CR++LP
Sbjct: 255 LELHNSCPVCRHELPT 270
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C QL PC+H FH +C+D WL+ +R
Sbjct: 372 TKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNR 431
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 432 TCPICRAD 439
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 149 IAMDLRMA--INNKSNVTRLPE-------KRIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE + E C IC V G++A+ PC H F
Sbjct: 493 LAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYF 552
Query: 200 HKRCIDFWLEKSRSCPLCR 218
HK C+ WL+KS +CP+CR
Sbjct: 553 HKPCVSIWLQKSGTCPVCR 571
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 149 IAMDLRMA--INNKSNVTRLPE-------KRIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+A+D+ +A +K ++ LPE + E C IC V G++A+ PC H F
Sbjct: 558 LAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYF 617
Query: 200 HKRCIDFWLEKSRSCPLCR 218
HK C+ WL+KS +CP+CR
Sbjct: 618 HKPCVSIWLQKSGTCPVCR 636
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 111 MFPQSVRIYTLTKLVVCVLDYF--KRLRTNPSNRFRKFVPIAMDLRMAINN-KSNVTRLP 167
+F SV + +T V ++ +RLR N + RK + D + AI + +
Sbjct: 208 IFFVSVSFFIITAATVGYFIFYSARRLR-NARAQSRKQRQLKADAKKAIGKLQLRTLKQG 266
Query: 168 EKRIESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
+K I + D CA+C++ L C+H+FHK C+D WL + R+CP+C+ D+
Sbjct: 267 DKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDI 321
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 94 DKGLHLLRLDASGGMPIMFPQSVRIYTLTKLVVCV----LDYFKRLRTNPSNRF-RKFVP 148
KG+++ + G M + + +Y T L + LD RL N F R+
Sbjct: 168 QKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQ 227
Query: 149 IAMDLRMAINN-KSNVTRLPEKRIE-SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDF 206
I D++ AI+ + V + ++ ++ +E +C +C D + C H FHK CID
Sbjct: 228 IKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDP 287
Query: 207 WLEKSRSCPLCRNDL 221
WL R+CP+C+ D+
Sbjct: 288 WLLAHRTCPMCKCDI 302
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 111 MFPQSVRIYTLTKLVVCVLDYF--KRLRTNPSNRFRKFVPIAMDLRMAINN-KSNVTRLP 167
+F SV + +T V ++ +RLR N + RK + D + AI + +
Sbjct: 208 IFFVSVSFFIITAATVGYFIFYSARRLR-NARAQSRKQRQLKADAKKAIGRLQLRTLKQG 266
Query: 168 EKRIESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
+K I + D CA+C++ L C+H+FHK C+D WL + R+CP+C+ D+
Sbjct: 267 DKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDI 321
>sp|Q803I8|SYVN1_DANRE E3 ubiquitin-protein ligase synoviolin OS=Danio rerio GN=syvn1 PE=2
SV=2
Length = 625
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 142 RFRKFVPIAMDLRMAINNKSNVT--RLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+F+K V A+ R AI N + + PE ++ C IC + +V G A PC+H+F
Sbjct: 254 QFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVTG--AKKLPCNHIF 311
Query: 200 HKRCIDFWLEKSRSCPLCRNDL 221
H C+ W ++ ++CP CR D+
Sbjct: 312 HSSCLRSWFQRQQTCPTCRMDV 333
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 118 IYTLTKLVVCVLDYFKRLR-TNPSNRFRKFVPIAMDLRMAINN-KSNVTRLPEKRIESEK 175
+ + L V Y +R R N +R ++ + A + AI+ + R +K ES+
Sbjct: 217 VLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAA--KKAISKLQVRTIRKGDKETESDF 274
Query: 176 D-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
D CA+C++G + PC H+FHK C+D WL R+CP+C+ ++
Sbjct: 275 DNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 321
>sp|Q9M0C3|ATL14_ARATH RING-H2 finger protein ATL14 OS=Arabidopsis thaliana GN=ATL14 PE=2
SV=1
Length = 176
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 176 DCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKSRSCPLCRN 219
DC +C+DG GQ P C HVFH++C+D WL K +CP+CR+
Sbjct: 114 DCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICRD 158
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 177 CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
CAICL+ + G+ PC H FHK+C+D WL + +CP CR+++
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 141 NRFRKFVPIAMDLRMAINNKSNVTRLP-----EKRIESEKDCAICLDGIVVGQLASCTPC 195
N+F P D K + LP E+ + S +C +C D +G+ PC
Sbjct: 195 NQFENTGPPPAD-------KEKIQALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPC 247
Query: 196 DHVFHKRCIDFWLEKSRSCPLCRNDL 221
+H+FH CI WLE+ SCP+CR L
Sbjct: 248 NHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q2TA44|RN148_BOVIN RING finger protein 148 OS=Bos taurus GN=RNF148 PE=2 SV=1
Length = 303
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 95 KGLHLLRLDASG------------GMPIMFPQSVRIYT-LTKLVVCVLDYFKRLRTNPSN 141
KG+ LL L G MP + + ++T LT V + Y P+
Sbjct: 159 KGMELLHLIQKGVYVKIIIEVGRMHMPWLSHYIMSLFTFLTATVAYLFLYCAWRPRGPNF 218
Query: 142 RFRKFVPIAMDLRMAINN-KSNVTRLPEKRIESEKD-CAICLDGIVVGQLASCTPCDHVF 199
R+ + D+R AI + V + +K +E ++D C +C D + C H+F
Sbjct: 219 STRRQRQLKADVRKAIGKLQLRVLQEGDKELEPDEDNCVVCFDIYKPQDVVRILTCKHIF 278
Query: 200 HKRCIDFWLEKSRSCPLCRNDL 221
HK CID WL R+CP+C+ D+
Sbjct: 279 HKACIDPWLLAHRTCPMCKCDI 300
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 154 RMAINNKSNVTRLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRS 213
+ + + VT PE+ + K C +CL G+ PC+H+FH CI WL K+ S
Sbjct: 57 KKVVESLPKVTVTPEQADAALK-CPVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNS 115
Query: 214 CPLCRNDLP 222
CPLCR++LP
Sbjct: 116 CPLCRHELP 124
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C+ QL PC+H FH +C+D WL+ +R
Sbjct: 442 TKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 501
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 502 TCPICRAD 509
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 159 NKSNVTRLPEKRI-----ESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
K+++ +LP R +SE+ C +C+ QL PC+H FH +C+D WL+ +R
Sbjct: 439 TKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR 498
Query: 213 SCPLCRND 220
+CP+CR D
Sbjct: 499 TCPICRAD 506
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 111 MFPQSVRIYTLTKLVVCVLDYF--KRLRTNPSNRFRKFVPIAMDLRMAINN-KSNVTRLP 167
+F SV + +T V ++ +RLR N + RK + D + AI + +
Sbjct: 208 IFFVSVSFFIITAATVGYFIFYSARRLR-NARAQSRKQRQLKADAKKAIGRLQLRTLKQG 266
Query: 168 EKRIESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
++ I + D CA+C++ L C+H+FHK C+D WL + R+CP+C+ D+
Sbjct: 267 DREIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDI 321
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 55.5 bits (132), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 177 CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
CAICL+ + G+ PC H FH++C+D WL + +CP CR+++
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 337
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 150 AMDLRMAINNKSNVTRLPEKRIESEK---DCAICL---DGIVVGQLASCTPCDHVFHKRC 203
++LR+ IN+ K + EK +CAICL DG V +L T C HVFH+ C
Sbjct: 81 GLELRI-INSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRL--LTTCYHVFHQEC 137
Query: 204 IDFWLEKSRSCPLCRNDL 221
ID W E R+CP+CR DL
Sbjct: 138 IDLWFESHRTCPVCRRDL 155
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 154 RMAINNKSNVTRLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRS 213
+ + + VT PE+ + K C +CL G+ PC+H+FH CI WL K+ S
Sbjct: 57 KKVVESLPKVTVTPEQADAALK-CPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTNS 115
Query: 214 CPLCRNDLP 222
CPLCR++LP
Sbjct: 116 CPLCRHELP 124
>sp|Q9UKV5|AMFR_HUMAN E3 ubiquitin-protein ligase AMFR OS=Homo sapiens GN=AMFR PE=1 SV=2
Length = 643
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 167 PEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
PE+ + DCAIC D + Q A PC H+FH C+ WLE+ SCP CR L
Sbjct: 331 PEELAVNNDDCAICWDSM---QAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 149 IAMDLRMAINNKSNVTRLPEKRI-----ESEKDCAICLDGIVVGQLASCTPCDHVFHKRC 203
I M++ + +K + LP I + +C++C + GQ PC H FH+ C
Sbjct: 37 IDMEIEVPEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEEC 96
Query: 204 IDFWLEKSRSCPLCRNDL 221
I WL+K+ SCPLCR +L
Sbjct: 97 ILLWLKKTNSCPLCRYEL 114
>sp|Q9R049|AMFR_MOUSE E3 ubiquitin-protein ligase AMFR OS=Mus musculus GN=Amfr PE=1 SV=2
Length = 643
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 167 PEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
PE+ + DCAIC D + Q A PC H+FH C+ WLE+ SCP CR L
Sbjct: 331 PEELAVNNDDCAICWDSM---QAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSL 382
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 141 NRFRKFVPIAMDLRMAINNKSNVTRLP-----EKRIESEKDCAICLDGIVVGQLASCTPC 195
N+F P D K + LP E+ + S +C +C D +G+ PC
Sbjct: 198 NQFENTGPPPAD-------KEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPC 250
Query: 196 DHVFHKRCIDFWLEKSRSCPLCRNDL 221
+H+FH CI WLE+ SCP+CR L
Sbjct: 251 NHLFHDGCIVPWLEQHDSCPVCRKSL 276
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 168 EKRIESEKD-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
+K ES+ D CA+C++G + PC H+FHK C+D WL R+CP+C+ ++
Sbjct: 268 DKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNI 322
>sp|Q86TM6|SYVN1_HUMAN E3 ubiquitin-protein ligase synoviolin OS=Homo sapiens GN=SYVN1
PE=1 SV=2
Length = 617
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 142 RFRKFVPIAMDLRMAINNKSNVT--RLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+F+K V A+ R AI N + + PE+ + C IC + +V G A PC+H+F
Sbjct: 254 QFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTG--AKRLPCNHIF 311
Query: 200 HKRCIDFWLEKSRSCPLCRNDL 221
H C+ W ++ ++CP CR D+
Sbjct: 312 HTSCLRSWFQRQQTCPTCRMDV 333
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 141 NRFRKFVPIAMDLRMAINNKSNVTRLP-----EKRIESEKDCAICLDGIVVGQLASCTPC 195
N+F P D K + LP E+ + S +C +C + +G+ PC
Sbjct: 197 NQFENTGPPPAD-------KEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPC 249
Query: 196 DHVFHKRCIDFWLEKSRSCPLCRNDL 221
+H+FH CI WLE+ SCP+CR L
Sbjct: 250 NHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 159 NKSNVTRLPEKRIESE------KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR 212
+KS + LP ++ + CA+C+D G PC HVFH+ C+ WLE
Sbjct: 192 SKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHN 251
Query: 213 SCPLCRNDLP 222
SCP+CR +LP
Sbjct: 252 SCPVCRFELP 261
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 118 IYTLTKLVVCVLDYFKRLR-TNPSNRFRKFVPIAMDLRMAINN-KSNVTRLPEKRIESEK 175
I + L V Y +R R N +R ++ + A + AI+ + R ++ ES+
Sbjct: 207 ILMIISLAWLVFYYIQRFRYANARDRNQRRLGDAA--KKAISQLQVRTIRKGDQETESDF 264
Query: 176 D-CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
D CA+C++G + PC H+FHK C+D WL R+CP+C+ ++
Sbjct: 265 DNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLVDHRTCPMCKMNI 311
>sp|Q9DBY1|SYVN1_MOUSE E3 ubiquitin-protein ligase synoviolin OS=Mus musculus GN=Syvn1
PE=1 SV=3
Length = 612
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 142 RFRKFVPIAMDLRMAINNKSNVT--RLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVF 199
+F+K V A+ R AI N + + PE+ + C IC + +V G A PC+H+F
Sbjct: 254 QFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVTG--AKRLPCNHIF 311
Query: 200 HKRCIDFWLEKSRSCPLCRNDL 221
H C+ W ++ ++CP CR D+
Sbjct: 312 HTSCLRSWFQRQQTCPTCRMDV 333
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 159 NKSNVTRLPEK--RIESEKD-----CAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS 211
K + ++P K + EKD CAIC++ PC H FHK CID WL +
Sbjct: 278 TKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEH 337
Query: 212 RSCPLCRNDL 221
R+CP+C+ D+
Sbjct: 338 RTCPMCKLDV 347
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 168 EKRIE-SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
EK I+ ++CA+C++ L PC H+FH+ CID WL + R+CP+C+ D+
Sbjct: 254 EKGIDIDAENCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDV 308
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 165 RLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
++ E+ + S +C +C + VG+ PC+H+FH CI WLE+ +CP+CR L
Sbjct: 216 QITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 165 RLPEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221
++ E+ + S +C +C + VG+ PC+H+FH CI WLE+ +CP+CR L
Sbjct: 215 QITEEHVGSGLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 176 DCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKSRSCPLCRN 219
+CA+CL +V G A P C+H FH CID W + +CPLCRN
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRN 163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,235,303
Number of Sequences: 539616
Number of extensions: 3180254
Number of successful extensions: 9418
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 8925
Number of HSP's gapped (non-prelim): 683
length of query: 224
length of database: 191,569,459
effective HSP length: 113
effective length of query: 111
effective length of database: 130,592,851
effective search space: 14495806461
effective search space used: 14495806461
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)