Query 037450
Match_columns 224
No_of_seqs 196 out of 1614
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 21:22:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037450.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037450hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.7 2.2E-17 7.6E-22 120.5 5.2 72 152-223 11-89 (91)
2 1x4j_A Ring finger protein 38; 99.7 5E-17 1.7E-21 114.1 4.0 53 172-224 21-73 (75)
3 1iym_A EL5; ring-H2 finger, ub 99.6 5.5E-16 1.9E-20 102.1 3.8 51 172-222 3-54 (55)
4 2kiz_A E3 ubiquitin-protein li 99.6 2.4E-15 8E-20 103.6 5.3 52 172-223 12-63 (69)
5 2ep4_A Ring finger protein 24; 99.6 3.1E-15 1.1E-19 104.4 4.9 51 172-222 13-63 (74)
6 2ect_A Ring finger protein 126 99.5 3.6E-15 1.2E-19 105.1 4.5 52 172-223 13-64 (78)
7 2ecm_A Ring finger and CHY zin 99.5 1.1E-14 3.6E-19 95.8 4.5 50 173-222 4-54 (55)
8 2ecl_A Ring-box protein 2; RNF 99.5 7.5E-15 2.6E-19 104.8 3.8 51 172-222 13-75 (81)
9 2ea6_A Ring finger protein 4; 99.5 2.9E-14 9.9E-19 97.6 4.7 53 172-224 13-69 (69)
10 3ng2_A RNF4, snurf, ring finge 99.5 2.2E-14 7.6E-19 98.9 3.3 52 172-223 8-63 (71)
11 2xeu_A Ring finger protein 4; 99.4 3.1E-14 1.1E-18 96.0 3.1 51 173-223 2-56 (64)
12 1v87_A Deltex protein 2; ring- 99.4 4.5E-14 1.5E-18 106.4 4.1 51 172-222 23-93 (114)
13 1chc_A Equine herpes virus-1 r 99.4 1.1E-13 3.8E-18 94.8 4.2 49 172-222 3-51 (68)
14 3dpl_R Ring-box protein 1; ubi 99.4 1.1E-13 3.9E-18 103.8 4.6 50 172-221 35-99 (106)
15 2ct2_A Tripartite motif protei 99.4 2.7E-13 9.3E-18 97.1 5.1 52 171-222 12-67 (88)
16 2djb_A Polycomb group ring fin 99.4 2.9E-13 1E-17 94.0 4.9 49 172-223 13-62 (72)
17 2d8t_A Dactylidin, ring finger 99.4 1.5E-13 5E-18 95.3 3.2 48 172-222 13-60 (71)
18 2ecn_A Ring finger protein 141 99.4 1.2E-13 3.9E-18 95.3 1.3 48 172-223 13-60 (70)
19 2d8s_A Cellular modulator of i 99.3 4.3E-13 1.5E-17 95.8 3.7 51 172-223 13-70 (80)
20 4ayc_A E3 ubiquitin-protein li 99.3 3.1E-13 1E-17 105.6 3.0 49 172-223 51-99 (138)
21 2ecy_A TNF receptor-associated 99.3 5.4E-13 1.8E-17 91.0 3.8 49 172-223 13-62 (66)
22 2ysl_A Tripartite motif-contai 99.3 1.1E-12 3.6E-17 91.0 5.1 49 172-223 18-69 (73)
23 2yur_A Retinoblastoma-binding 99.3 8.4E-13 2.9E-17 92.3 4.4 48 172-222 13-63 (74)
24 2csy_A Zinc finger protein 183 99.3 1.2E-12 4.1E-17 92.8 5.0 48 172-222 13-60 (81)
25 1t1h_A Gspef-atpub14, armadill 99.3 1.6E-12 5.6E-17 91.3 4.5 49 172-223 6-55 (78)
26 2ecw_A Tripartite motif-contai 99.3 2.3E-12 7.9E-17 91.3 5.1 50 171-223 16-71 (85)
27 4a0k_B E3 ubiquitin-protein li 99.3 3.1E-13 1E-17 103.2 0.2 50 172-221 46-110 (117)
28 3lrq_A E3 ubiquitin-protein li 99.3 1E-12 3.5E-17 97.2 2.8 48 172-222 20-69 (100)
29 2ecv_A Tripartite motif-contai 99.3 3.5E-12 1.2E-16 90.4 4.2 49 172-223 17-71 (85)
30 4ap4_A E3 ubiquitin ligase RNF 99.3 2.2E-12 7.5E-17 98.7 3.4 52 172-223 5-60 (133)
31 2egp_A Tripartite motif-contai 99.3 9.9E-13 3.4E-17 92.4 1.3 49 172-223 10-65 (79)
32 2y43_A E3 ubiquitin-protein li 99.2 3.5E-12 1.2E-16 93.8 3.4 48 172-222 20-68 (99)
33 2ckl_A Polycomb group ring fin 99.2 5.5E-12 1.9E-16 94.2 4.4 49 172-223 13-62 (108)
34 2ysj_A Tripartite motif-contai 99.2 8.5E-12 2.9E-16 84.1 4.8 43 172-217 18-63 (63)
35 3fl2_A E3 ubiquitin-protein li 99.2 4.4E-12 1.5E-16 97.0 3.5 49 172-223 50-99 (124)
36 1g25_A CDK-activating kinase a 99.2 7E-12 2.4E-16 85.2 4.1 51 173-223 2-55 (65)
37 3ztg_A E3 ubiquitin-protein li 99.2 1.4E-11 4.7E-16 89.2 4.7 47 172-221 11-60 (92)
38 4ap4_A E3 ubiquitin ligase RNF 99.2 7.5E-12 2.6E-16 95.6 3.2 52 172-223 70-125 (133)
39 2ecj_A Tripartite motif-contai 99.2 1.2E-11 4.1E-16 81.7 3.6 43 172-217 13-58 (58)
40 2ct0_A Non-SMC element 1 homol 99.2 1.7E-11 5.7E-16 86.2 4.2 49 172-222 13-63 (74)
41 1jm7_A BRCA1, breast cancer ty 99.2 1.1E-11 3.8E-16 92.6 3.2 49 172-223 19-70 (112)
42 1rmd_A RAG1; V(D)J recombinati 99.1 1.4E-11 4.9E-16 93.0 3.2 48 172-222 21-69 (116)
43 1z6u_A NP95-like ring finger p 99.1 2E-11 6.7E-16 96.9 3.9 49 172-223 76-125 (150)
44 2ckl_B Ubiquitin ligase protei 99.1 1.6E-11 5.5E-16 98.3 3.0 49 172-222 52-101 (165)
45 3hct_A TNF receptor-associated 99.1 2.2E-11 7.6E-16 92.4 3.0 49 172-223 16-65 (118)
46 2kr4_A Ubiquitin conjugation f 99.1 5.4E-11 1.8E-15 85.5 4.3 49 172-223 12-60 (85)
47 3l11_A E3 ubiquitin-protein li 99.1 1.2E-11 4.2E-16 93.2 -0.1 48 172-222 13-61 (115)
48 1wgm_A Ubiquitin conjugation f 99.1 1E-10 3.5E-15 86.4 4.8 49 172-223 20-69 (98)
49 2kre_A Ubiquitin conjugation f 99.1 1E-10 3.5E-15 86.7 4.5 49 172-223 27-75 (100)
50 2y1n_A E3 ubiquitin-protein li 99.1 8.1E-11 2.8E-15 106.3 4.5 47 173-222 331-378 (389)
51 2vje_A E3 ubiquitin-protein li 99.0 1.5E-10 5.3E-15 78.7 3.3 48 172-222 6-56 (64)
52 3knv_A TNF receptor-associated 99.0 1.1E-10 3.7E-15 91.7 2.9 47 172-221 29-76 (141)
53 1bor_A Transcription factor PM 99.0 8.7E-11 3E-15 77.7 1.1 45 172-222 4-48 (56)
54 1e4u_A Transcriptional repress 98.9 3.2E-10 1.1E-14 80.4 3.1 51 172-223 9-62 (78)
55 1jm7_B BARD1, BRCA1-associated 98.9 1.3E-10 4.4E-15 88.0 0.6 46 172-222 20-66 (117)
56 2vje_B MDM4 protein; proto-onc 98.9 4.8E-10 1.6E-14 76.0 3.0 48 172-222 5-55 (63)
57 4ic3_A E3 ubiquitin-protein li 98.9 2.1E-10 7.1E-15 80.2 1.2 44 172-222 22-66 (74)
58 2c2l_A CHIP, carboxy terminus 98.9 8.8E-10 3E-14 94.0 4.1 49 172-223 206-255 (281)
59 3hcs_A TNF receptor-associated 98.8 9.4E-10 3.2E-14 88.3 3.0 49 172-223 16-65 (170)
60 2yu4_A E3 SUMO-protein ligase 98.8 1.4E-09 4.8E-14 79.4 2.8 46 172-220 5-59 (94)
61 3k1l_B Fancl; UBC, ring, RWD, 98.8 1.5E-09 5.1E-14 96.2 1.7 52 172-223 306-373 (381)
62 2ecg_A Baculoviral IAP repeat- 98.7 2.1E-09 7.2E-14 75.1 1.7 45 172-223 23-68 (75)
63 2f42_A STIP1 homology and U-bo 98.7 5.7E-09 1.9E-13 85.0 3.6 49 172-223 104-153 (179)
64 1wim_A KIAA0161 protein; ring 98.7 9.3E-09 3.2E-13 74.7 3.4 50 173-222 4-65 (94)
65 2ea5_A Cell growth regulator w 98.6 1.6E-08 5.5E-13 69.5 3.7 44 172-222 13-57 (68)
66 1vyx_A ORF K3, K3RING; zinc-bi 98.6 1.6E-08 5.4E-13 68.0 3.4 49 172-223 4-59 (60)
67 2yho_A E3 ubiquitin-protein li 98.6 6.7E-09 2.3E-13 73.5 1.2 44 172-222 16-60 (79)
68 2bay_A PRE-mRNA splicing facto 98.5 5.6E-08 1.9E-12 65.5 2.4 47 174-223 3-50 (61)
69 3htk_C E3 SUMO-protein ligase 98.4 7.1E-08 2.4E-12 82.7 2.9 49 172-222 179-231 (267)
70 3t6p_A Baculoviral IAP repeat- 98.4 3.6E-08 1.2E-12 87.9 1.0 44 172-222 293-337 (345)
71 3vk6_A E3 ubiquitin-protein li 98.1 1.5E-06 5.2E-11 63.7 3.7 45 176-222 3-48 (101)
72 3nw0_A Non-structural maintena 97.8 1.3E-05 4.6E-10 67.8 3.7 48 173-222 179-228 (238)
73 2jun_A Midline-1; B-BOX, TRIM, 95.3 0.011 3.7E-07 42.6 3.0 36 173-208 2-38 (101)
74 2ko5_A Ring finger protein Z; 94.7 0.019 6.5E-07 41.4 2.8 54 166-224 20-74 (99)
75 2lri_C Autoimmune regulator; Z 94.6 0.02 6.8E-07 38.6 2.7 47 172-221 10-60 (66)
76 1wil_A KIAA1045 protein; ring 92.4 0.099 3.4E-06 36.9 3.2 38 169-207 10-47 (89)
77 2l5u_A Chromodomain-helicase-D 90.3 0.14 4.7E-06 33.7 2.0 45 172-219 9-57 (61)
78 1f62_A Transcription factor WS 89.3 0.15 5.2E-06 32.0 1.6 44 176-219 2-49 (51)
79 1mm2_A MI2-beta; PHD, zinc fin 88.8 0.068 2.3E-06 35.2 -0.3 47 172-221 7-57 (61)
80 1fp0_A KAP-1 corepressor; PHD 88.2 0.16 5.4E-06 36.2 1.2 51 167-220 18-72 (88)
81 2k16_A Transcription initiatio 87.5 0.11 3.7E-06 35.5 -0.0 50 172-221 16-69 (75)
82 1we9_A PHD finger family prote 86.6 0.099 3.4E-06 34.5 -0.6 49 172-220 4-58 (64)
83 2lv9_A Histone-lysine N-methyl 85.5 0.22 7.6E-06 35.9 0.8 48 172-220 26-76 (98)
84 3m62_A Ubiquitin conjugation f 85.0 0.62 2.1E-05 46.4 3.9 49 172-223 889-938 (968)
85 2yql_A PHD finger protein 21A; 84.0 0.08 2.7E-06 34.2 -2.0 45 172-219 7-55 (56)
86 2ysm_A Myeloid/lymphoid or mix 83.5 0.26 8.9E-06 36.1 0.4 47 172-218 5-55 (111)
87 2yt5_A Metal-response element- 81.7 0.25 8.4E-06 32.7 -0.3 52 172-223 4-64 (66)
88 1wep_A PHF8; structural genomi 80.8 1.1 3.7E-05 30.7 2.8 49 172-221 10-64 (79)
89 1z60_A TFIIH basal transcripti 80.6 0.46 1.6E-05 31.2 0.7 43 175-217 16-58 (59)
90 1xwh_A Autoimmune regulator; P 80.3 0.16 5.4E-06 33.9 -1.7 46 172-220 6-55 (66)
91 2puy_A PHD finger protein 21A; 79.3 0.18 6E-06 32.9 -1.7 45 173-220 4-52 (60)
92 2lbm_A Transcriptional regulat 79.2 2.2 7.5E-05 32.9 4.3 46 172-220 61-117 (142)
93 3v43_A Histone acetyltransfera 79.0 2.6 8.8E-05 30.8 4.5 46 173-218 4-62 (112)
94 2l43_A N-teminal domain from h 76.6 0.46 1.6E-05 33.6 -0.2 50 171-220 22-75 (88)
95 1wem_A Death associated transc 76.0 0.61 2.1E-05 31.7 0.2 48 173-221 15-71 (76)
96 2e6r_A Jumonji/ARID domain-con 75.5 0.21 7.1E-06 35.7 -2.3 48 172-219 14-65 (92)
97 3v43_A Histone acetyltransfera 75.5 0.68 2.3E-05 34.0 0.4 47 173-219 60-111 (112)
98 3shb_A E3 ubiquitin-protein li 73.2 0.52 1.8E-05 32.5 -0.7 44 176-219 28-76 (77)
99 2kgg_A Histone demethylase jar 72.9 3.2 0.00011 25.9 3.1 43 176-218 4-52 (52)
100 1wen_A Inhibitor of growth fam 71.3 2 6.8E-05 29.0 2.0 46 172-221 14-66 (71)
101 2e6s_A E3 ubiquitin-protein li 71.1 0.83 2.8E-05 31.4 -0.0 45 175-219 27-76 (77)
102 1wew_A DNA-binding family prot 71.1 1 3.4E-05 30.9 0.4 49 172-221 14-73 (78)
103 1weu_A Inhibitor of growth fam 68.7 1.9 6.6E-05 30.6 1.5 46 172-221 34-86 (91)
104 2ku3_A Bromodomain-containing 68.6 1.1 3.8E-05 30.3 0.2 48 172-219 14-65 (71)
105 3asl_A E3 ubiquitin-protein li 68.0 1.1 3.7E-05 30.2 -0.0 45 176-220 20-69 (70)
106 3o70_A PHD finger protein 13; 67.9 0.74 2.5E-05 30.9 -0.9 47 172-219 17-66 (68)
107 3ql9_A Transcriptional regulat 65.8 5.5 0.00019 30.1 3.6 45 172-219 55-110 (129)
108 3ask_A E3 ubiquitin-protein li 62.7 1.6 5.6E-05 36.2 0.1 47 174-220 174-225 (226)
109 2kwj_A Zinc finger protein DPF 61.1 4.6 0.00016 29.5 2.4 33 175-207 2-41 (114)
110 2rsd_A E3 SUMO-protein ligase 60.7 0.53 1.8E-05 31.5 -2.7 46 173-219 9-64 (68)
111 3i2d_A E3 SUMO-protein ligase 59.0 8.1 0.00028 34.3 4.0 48 172-222 247-299 (371)
112 2cs3_A Protein C14ORF4, MY039 57.2 8.1 0.00028 26.9 2.8 39 172-210 13-52 (93)
113 1wee_A PHD finger family prote 57.1 0.93 3.2E-05 30.5 -1.9 49 172-221 14-67 (72)
114 2ysm_A Myeloid/lymphoid or mix 56.6 1.3 4.4E-05 32.2 -1.4 45 175-219 55-103 (111)
115 3c6w_A P28ING5, inhibitor of g 56.1 1.7 5.7E-05 28.2 -0.7 44 172-219 7-57 (59)
116 4fo9_A E3 SUMO-protein ligase 55.9 9.9 0.00034 33.6 3.9 48 172-222 213-265 (360)
117 4gne_A Histone-lysine N-methyl 55.0 6.3 0.00022 28.7 2.2 44 172-220 13-62 (107)
118 2vpb_A Hpygo1, pygopus homolog 54.9 8.9 0.00031 25.2 2.7 33 172-204 6-40 (65)
119 2kvh_A Zinc finger and BTB dom 54.1 2.4 8.3E-05 21.2 -0.2 15 20-34 1-15 (27)
120 1z2q_A LM5-1; membrane protein 53.8 11 0.00037 25.9 3.1 36 172-207 19-55 (84)
121 2m0e_A Zinc finger and BTB dom 53.7 4.8 0.00016 19.9 1.0 14 21-34 1-14 (29)
122 2kwj_A Zinc finger protein DPF 52.9 1.1 3.9E-05 32.9 -2.2 46 175-220 59-108 (114)
123 2vnf_A ING 4, P29ING4, inhibit 52.6 2 6.7E-05 27.9 -0.9 43 173-219 9-58 (60)
124 1wev_A Riken cDNA 1110020M19; 52.3 1.2 4E-05 31.4 -2.2 49 172-220 14-72 (88)
125 1p7a_A BF3, BKLF, kruppel-like 52.2 4.7 0.00016 21.8 0.9 17 19-35 8-24 (37)
126 1iml_A CRIP, cysteine rich int 50.7 7.6 0.00026 25.5 1.9 46 172-221 25-71 (76)
127 1fv5_A First zinc finger of U- 50.6 3.1 0.00011 23.9 -0.1 17 18-34 4-20 (36)
128 2cu8_A Cysteine-rich protein 2 50.4 11 0.00037 24.8 2.6 38 175-222 10-47 (76)
129 3o7a_A PHD finger protein 13 v 50.2 2 7E-05 26.9 -1.1 41 179-219 8-51 (52)
130 2g6q_A Inhibitor of growth pro 47.9 2.7 9.3E-05 27.5 -0.7 47 172-220 9-60 (62)
131 2xb1_A Pygopus homolog 2, B-ce 47.0 10 0.00034 27.4 2.1 48 174-221 3-62 (105)
132 2kvf_A Zinc finger and BTB dom 45.7 3.9 0.00013 20.4 -0.2 15 20-34 1-15 (28)
133 2elr_A Zinc finger protein 406 45.1 7.1 0.00024 20.7 0.9 17 19-35 6-22 (36)
134 2yw8_A RUN and FYVE domain-con 44.9 12 0.00041 25.6 2.2 35 172-206 17-52 (82)
135 1weo_A Cellulose synthase, cat 44.8 25 0.00085 24.8 3.8 49 173-221 15-68 (93)
136 2kvg_A Zinc finger and BTB dom 44.5 3.2 0.00011 20.9 -0.7 14 21-34 2-15 (27)
137 2lvu_A Zinc finger and BTB dom 50.3 4.7 0.00016 19.8 0.0 13 22-34 2-14 (26)
138 1joc_A EEA1, early endosomal a 44.1 12 0.00041 27.8 2.3 35 172-206 67-102 (125)
139 2jvx_A NF-kappa-B essential mo 43.9 4.3 0.00015 22.4 -0.2 11 212-222 4-14 (28)
140 1ard_A Yeast transcription fac 43.8 7.5 0.00026 19.2 0.8 14 22-35 2-15 (29)
141 2gmg_A Hypothetical protein PF 43.6 4.5 0.00015 29.5 -0.2 26 190-220 68-93 (105)
142 1vfy_A Phosphatidylinositol-3- 43.2 14 0.00048 24.6 2.3 32 174-205 11-43 (73)
143 3t7l_A Zinc finger FYVE domain 43.1 13 0.00046 25.8 2.3 36 172-207 18-54 (90)
144 2co8_A NEDD9 interacting prote 42.6 17 0.00058 24.3 2.7 41 172-222 13-53 (82)
145 2k1p_A Zinc finger RAN-binding 42.4 8.2 0.00028 21.9 0.8 12 18-29 2-13 (33)
146 2lvr_A Zinc finger and BTB dom 47.5 5.6 0.00019 20.0 0.0 14 21-34 2-15 (30)
147 2jne_A Hypothetical protein YF 41.3 8 0.00027 27.8 0.8 42 173-222 31-72 (101)
148 1wfk_A Zinc finger, FYVE domai 41.0 14 0.00048 25.7 2.1 35 172-206 7-42 (88)
149 2elx_A Zinc finger protein 406 40.9 5.3 0.00018 21.1 -0.2 16 20-35 5-20 (35)
150 2elq_A Zinc finger protein 406 40.6 5.3 0.00018 21.4 -0.2 17 19-35 6-22 (36)
151 1zbd_B Rabphilin-3A; G protein 40.4 13 0.00044 28.1 1.9 34 172-205 53-88 (134)
152 2d8v_A Zinc finger FYVE domain 40.3 13 0.00046 24.7 1.7 32 172-207 6-38 (67)
153 2dj7_A Actin-binding LIM prote 39.8 21 0.00073 23.8 2.8 41 172-222 13-53 (80)
154 1zfd_A SWI5; DNA binding motif 39.4 10 0.00035 19.5 0.9 15 20-34 1-17 (32)
155 1x4u_A Zinc finger, FYVE domai 38.7 16 0.00056 24.9 2.1 35 172-206 12-47 (84)
156 1znf_A 31ST zinc finger from X 38.5 8.7 0.0003 18.7 0.5 13 22-34 1-13 (27)
157 2els_A Zinc finger protein 406 37.7 6.5 0.00022 21.0 -0.1 16 19-34 6-21 (36)
158 3fyb_A Protein of unknown func 37.6 13 0.00045 26.7 1.5 12 198-209 41-52 (104)
159 2o35_A Hypothetical protein DU 37.4 13 0.00045 26.8 1.5 12 198-209 42-53 (105)
160 1klr_A Zinc finger Y-chromosom 37.4 12 0.0004 18.5 0.9 13 22-34 2-14 (30)
161 2elp_A Zinc finger protein 406 37.3 6.4 0.00022 21.2 -0.2 16 20-35 7-22 (37)
162 2elt_A Zinc finger protein 406 37.3 6.5 0.00022 20.9 -0.1 17 19-35 6-22 (36)
163 2eou_A Zinc finger protein 473 36.8 12 0.00042 21.0 1.1 17 19-35 9-25 (44)
164 1dvp_A HRS, hepatocyte growth 36.3 14 0.00049 29.8 1.7 35 172-206 159-194 (220)
165 1srk_A Zinc finger protein ZFP 36.3 6.8 0.00023 20.7 -0.2 16 20-35 5-20 (35)
166 1x63_A Skeletal muscle LIM-pro 36.2 34 0.0012 22.5 3.4 39 175-222 16-54 (82)
167 2en7_A Zinc finger protein 268 35.7 13 0.00045 20.7 1.0 18 19-36 9-26 (44)
168 2elo_A Zinc finger protein 406 35.3 7.8 0.00027 20.8 -0.0 17 19-35 6-22 (37)
169 1y02_A CARP2, FYVE-ring finger 35.3 3.5 0.00012 30.8 -2.0 46 172-217 17-63 (120)
170 2eos_A B-cell lymphoma 6 prote 35.1 12 0.0004 20.8 0.8 18 19-36 8-25 (42)
171 2elm_A Zinc finger protein 406 35.1 6 0.0002 21.6 -0.6 16 20-35 7-22 (37)
172 3mjh_B Early endosome antigen 34.7 8.1 0.00028 22.3 -0.0 9 213-221 7-15 (34)
173 1wyh_A SLIM 2, skeletal muscle 34.4 29 0.001 22.1 2.8 27 176-203 7-33 (72)
174 1paa_A Yeast transcription fac 34.4 13 0.00043 18.5 0.7 13 22-34 2-14 (30)
175 1x4l_A Skeletal muscle LIM-pro 34.2 17 0.00057 23.5 1.5 10 176-185 7-16 (72)
176 2yti_A Zinc finger protein 347 34.1 14 0.00047 21.0 1.0 19 19-37 9-27 (46)
177 2kfq_A FP1; protein, de novo p 34.1 16 0.00054 19.0 1.2 14 22-35 2-15 (32)
178 2zet_C Melanophilin; complex, 33.6 19 0.00065 27.8 1.9 32 173-204 67-100 (153)
179 2d8x_A Protein pinch; LIM doma 33.5 23 0.00079 22.6 2.1 13 173-185 30-42 (70)
180 3zyq_A Hepatocyte growth facto 33.3 18 0.00061 29.5 1.8 36 172-207 162-198 (226)
181 3kv5_D JMJC domain-containing 33.1 6.8 0.00023 36.0 -0.8 46 173-219 36-87 (488)
182 2m0d_A Zinc finger and BTB dom 33.1 9 0.00031 19.0 -0.0 14 21-34 2-15 (30)
183 2enf_A Zinc finger protein 347 33.0 13 0.00046 21.0 0.8 19 19-37 9-27 (46)
184 2yte_A Zinc finger protein 473 32.6 14 0.00049 20.2 0.9 18 19-36 7-24 (42)
185 2en2_A B-cell lymphoma 6 prote 32.4 9 0.00031 21.2 -0.1 18 19-36 8-25 (42)
186 2lvt_A Zinc finger and BTB dom 38.1 9.7 0.00033 18.9 0.0 13 22-34 2-14 (29)
187 1x4k_A Skeletal muscle LIM-pro 31.8 38 0.0013 21.6 3.0 10 176-185 7-16 (72)
188 3f6q_B LIM and senescent cell 31.6 21 0.00072 22.7 1.7 39 174-221 11-49 (72)
189 1a7i_A QCRP2 (LIM1); LIM domai 31.5 10 0.00034 25.3 0.0 12 173-184 33-44 (81)
190 2ytb_A Zinc finger protein 32; 31.5 16 0.00053 20.1 0.9 17 19-35 8-24 (42)
191 2emz_A ZFP-95, zinc finger pro 31.3 17 0.00057 20.6 1.0 17 19-35 9-25 (46)
192 2elv_A Zinc finger protein 406 31.2 9.2 0.00032 20.4 -0.2 16 20-35 7-22 (36)
193 2eov_A Zinc finger protein 484 30.2 16 0.00055 20.6 0.8 18 19-36 9-26 (46)
194 2ep1_A Zinc finger protein 484 29.7 18 0.00061 20.3 1.0 19 19-37 9-27 (46)
195 2eq1_A Zinc finger protein 347 29.6 19 0.00065 20.3 1.1 19 19-37 9-27 (46)
196 1rim_A E6APC2 peptide; E6-bind 29.6 19 0.00066 18.8 1.0 13 22-34 2-14 (33)
197 2ytn_A Zinc finger protein 347 29.5 18 0.0006 20.5 0.9 19 19-37 9-27 (46)
198 2emg_A Zinc finger protein 484 29.3 18 0.0006 20.4 0.9 18 19-36 9-26 (46)
199 2elz_A Zinc finger protein 224 29.3 17 0.00058 20.6 0.8 18 19-36 9-26 (46)
200 2eom_A ZFP-95, zinc finger pro 29.2 19 0.00065 20.4 1.0 17 19-35 9-25 (46)
201 2el5_A Zinc finger protein 268 29.2 11 0.00036 20.9 -0.2 18 19-36 7-24 (42)
202 2eq2_A Zinc finger protein 347 29.2 19 0.00063 20.3 1.0 19 19-37 9-27 (46)
203 2yth_A Zinc finger protein 224 29.1 17 0.00059 20.6 0.8 19 19-37 9-27 (46)
204 1zfo_A LAsp-1; LIM domain, zin 29.0 23 0.00078 19.5 1.3 28 174-203 3-30 (31)
205 2ytr_A Zinc finger protein 347 28.9 20 0.00067 20.2 1.0 18 19-36 9-26 (46)
206 3a1b_A DNA (cytosine-5)-methyl 28.7 33 0.0011 26.7 2.5 36 172-210 77-114 (159)
207 2jny_A Uncharacterized BCR; st 28.3 9.7 0.00033 25.4 -0.5 17 205-221 4-20 (67)
208 2eon_A ZFP-95, zinc finger pro 28.3 18 0.00062 20.5 0.8 18 19-36 9-26 (46)
209 2eop_A Zinc finger protein 268 28.2 19 0.00065 20.2 0.9 18 19-36 9-26 (46)
210 2jmi_A Protein YNG1, ING1 homo 28.1 10 0.00034 26.8 -0.5 46 172-219 24-75 (90)
211 2emk_A Zinc finger protein 28 28.1 18 0.00062 20.5 0.8 19 19-37 9-27 (46)
212 2eoj_A Zinc finger protein 268 28.1 12 0.00042 20.9 -0.0 19 19-37 9-27 (44)
213 2eoh_A Zinc finger protein 28 27.9 21 0.0007 20.2 1.0 17 19-35 9-25 (46)
214 2ept_A Zinc finger protein 32; 27.8 11 0.00039 20.7 -0.2 16 20-35 8-23 (41)
215 2epx_A Zinc finger protein 28 27.6 19 0.00065 20.3 0.8 19 19-37 9-27 (47)
216 3mpx_A FYVE, rhogef and PH dom 27.6 13 0.00044 32.8 0.0 50 172-221 373-430 (434)
217 2enh_A Zinc finger protein 28 27.5 20 0.00068 20.3 0.9 18 19-36 9-26 (46)
218 2en9_A Zinc finger protein 28 27.5 20 0.00067 20.3 0.9 18 19-36 9-26 (46)
219 1x68_A FHL5 protein; four-and- 27.5 37 0.0013 22.0 2.4 28 175-203 6-35 (76)
220 2eoq_A Zinc finger protein 224 27.4 21 0.00073 20.1 1.0 18 19-36 9-26 (46)
221 2epc_A Zinc finger protein 32; 27.4 12 0.0004 20.7 -0.2 17 19-35 8-24 (42)
222 2yrm_A B-cell lymphoma 6 prote 27.2 19 0.00066 20.1 0.8 17 19-35 7-23 (43)
223 2yu5_A Zinc finger protein 473 26.8 13 0.00043 20.9 -0.1 18 19-36 9-26 (44)
224 2em6_A Zinc finger protein 224 26.8 20 0.00067 20.3 0.8 18 19-36 9-26 (46)
225 1sp2_A SP1F2; zinc finger, tra 26.8 22 0.00077 17.9 0.9 13 22-34 2-16 (31)
226 2lk0_A RNA-binding protein 5; 26.7 13 0.00044 20.9 -0.1 11 19-29 2-12 (32)
227 2em0_A Zinc finger protein 224 26.5 22 0.00077 20.0 1.0 19 19-37 9-27 (46)
228 2eq4_A Zinc finger protein 224 26.4 21 0.00073 20.0 0.9 18 19-36 9-26 (46)
229 3pwf_A Rubrerythrin; non heme 26.3 32 0.0011 26.8 2.1 26 188-220 137-162 (170)
230 2kdx_A HYPA, hydrogenase/ureas 26.0 26 0.00088 25.5 1.4 27 188-220 72-99 (119)
231 1njq_A Superman protein; zinc- 25.9 14 0.00047 20.1 -0.1 16 20-35 4-19 (39)
232 2epz_A Zinc finger protein 28 25.7 22 0.00077 20.0 0.9 19 19-37 9-27 (46)
233 2ytq_A Zinc finger protein 268 25.5 21 0.00073 20.1 0.8 18 19-36 9-26 (46)
234 2ytt_A Zinc finger protein 473 25.4 24 0.00081 19.9 1.0 18 19-36 9-26 (46)
235 2eoy_A Zinc finger protein 473 25.4 13 0.00046 21.0 -0.2 18 19-36 9-26 (46)
236 2epw_A Zinc finger protein 268 25.3 14 0.00047 20.9 -0.2 19 19-37 9-27 (46)
237 2epv_A Zinc finger protein 268 25.3 14 0.00047 20.8 -0.2 18 19-36 9-26 (44)
238 2m0f_A Zinc finger and BTB dom 25.2 15 0.0005 17.9 -0.0 13 22-34 2-14 (29)
239 1x62_A C-terminal LIM domain p 25.2 30 0.001 22.8 1.5 38 173-221 14-51 (79)
240 2cor_A Pinch protein; LIM doma 25.0 38 0.0013 22.3 2.1 38 174-222 15-52 (79)
241 2lcq_A Putative toxin VAPC6; P 25.0 20 0.00067 27.5 0.6 26 190-221 133-158 (165)
242 2pv0_B DNA (cytosine-5)-methyl 24.9 42 0.0014 29.9 2.8 45 172-219 91-147 (386)
243 1rik_A E6APC1 peptide; E6-bind 24.9 14 0.00049 18.1 -0.1 13 22-34 2-14 (29)
244 2eps_A POZ-, at HOOK-, and zin 24.8 26 0.00089 20.7 1.1 15 19-33 38-52 (54)
245 2ytm_A Zinc finger protein 28 24.6 24 0.00081 20.0 0.8 17 19-35 9-25 (46)
246 2emb_A Zinc finger protein 473 24.5 15 0.00051 20.5 -0.1 17 20-36 10-26 (44)
247 2ely_A Zinc finger protein 224 24.4 24 0.0008 19.9 0.8 17 19-35 9-25 (46)
248 2emy_A Zinc finger protein 268 24.3 15 0.0005 20.8 -0.2 19 19-37 9-27 (46)
249 2d8y_A Eplin protein; LIM doma 24.2 67 0.0023 21.6 3.3 10 176-185 17-26 (91)
250 2eq3_A Zinc finger protein 347 23.9 16 0.00054 20.6 -0.1 19 19-37 9-27 (46)
251 2emj_A Zinc finger protein 28 23.8 15 0.00053 20.8 -0.1 17 20-36 10-26 (46)
252 2ytp_A Zinc finger protein 484 23.8 15 0.00052 20.8 -0.2 18 19-36 9-26 (46)
253 3iuf_A Zinc finger protein UBI 23.8 16 0.00054 21.3 -0.1 17 19-35 4-20 (48)
254 2en3_A ZFP-95, zinc finger pro 23.4 16 0.00054 20.7 -0.2 17 19-35 9-25 (46)
255 2emi_A Zinc finger protein 484 23.4 16 0.00053 20.7 -0.2 17 19-35 9-25 (46)
256 2d8z_A Four and A half LIM dom 23.3 51 0.0017 20.8 2.4 12 173-184 30-41 (70)
257 2em2_A Zinc finger protein 28 23.3 16 0.00054 20.7 -0.2 18 19-36 9-26 (46)
258 2jmo_A Parkin; IBR, E3 ligase, 23.0 6.7 0.00023 26.8 -2.2 20 194-215 55-74 (80)
259 2emx_A Zinc finger protein 268 22.8 16 0.00056 20.4 -0.2 16 20-35 8-23 (44)
260 2eow_A Zinc finger protein 347 22.8 17 0.00057 20.5 -0.1 18 19-36 9-26 (46)
261 2yto_A Zinc finger protein 484 22.6 17 0.00057 20.6 -0.2 18 19-36 9-26 (46)
262 2yts_A Zinc finger protein 484 22.5 17 0.00057 20.5 -0.2 19 19-37 9-27 (46)
263 2ytf_A Zinc finger protein 268 22.5 17 0.00058 20.5 -0.2 18 19-36 9-26 (46)
264 2ytk_A Zinc finger protein 347 22.2 17 0.00059 20.5 -0.2 17 20-36 10-26 (46)
265 2emh_A Zinc finger protein 484 22.2 18 0.00061 20.4 -0.1 18 19-36 9-26 (46)
266 2em9_A Zinc finger protein 224 22.1 17 0.00059 20.4 -0.2 18 19-36 9-26 (46)
267 2kpi_A Uncharacterized protein 22.0 8.8 0.0003 24.5 -1.6 16 206-221 5-20 (56)
268 1yui_A GAGA-factor; complex (D 22.0 18 0.00062 21.5 -0.1 17 19-35 21-37 (54)
269 4gzn_C ZFP-57, zinc finger pro 21.9 18 0.00062 22.8 -0.1 16 20-35 2-17 (60)
270 2ytj_A Zinc finger protein 484 21.9 18 0.0006 20.5 -0.2 18 20-37 10-27 (46)
271 2eof_A Zinc finger protein 268 21.9 18 0.00062 20.0 -0.1 18 19-36 9-26 (44)
272 2yrj_A Zinc finger protein 473 21.9 17 0.0006 20.4 -0.2 19 19-37 9-27 (46)
273 2em3_A Zinc finger protein 28 21.9 18 0.0006 20.4 -0.2 19 19-37 9-27 (46)
274 2eor_A Zinc finger protein 224 21.7 19 0.00064 20.3 -0.1 17 19-35 9-25 (46)
275 2en8_A Zinc finger protein 224 21.4 19 0.00065 20.2 -0.1 17 20-36 10-26 (46)
276 2dar_A PDZ and LIM domain prot 21.4 44 0.0015 22.5 1.8 39 173-222 24-62 (90)
277 1wd2_A Ariadne-1 protein homol 21.3 11 0.00037 24.4 -1.3 38 174-211 6-48 (60)
278 1v6g_A Actin binding LIM prote 21.3 62 0.0021 21.1 2.6 25 176-203 17-41 (81)
279 2yu8_A Zinc finger protein 347 21.3 18 0.00063 20.4 -0.2 17 20-36 10-26 (46)
280 2ema_A Zinc finger protein 347 21.2 18 0.00062 20.4 -0.2 18 19-36 9-26 (46)
281 3uk3_C Zinc finger protein 217 21.1 28 0.00096 20.4 0.7 16 20-35 2-17 (57)
282 1nyp_A Pinch protein; LIM doma 21.1 53 0.0018 20.5 2.1 25 176-203 7-31 (66)
283 2emf_A Zinc finger protein 484 21.1 18 0.00062 20.4 -0.2 18 19-36 9-26 (46)
284 2eq0_A Zinc finger protein 347 20.9 20 0.00067 20.2 -0.1 19 19-37 9-27 (46)
285 2eoo_A ZFP-95, zinc finger pro 20.9 19 0.00064 20.4 -0.2 17 19-35 9-25 (46)
286 2ene_A Zinc finger protein 347 20.8 19 0.00066 20.3 -0.2 17 19-35 9-25 (46)
287 2em4_A Zinc finger protein 28 20.8 19 0.00066 20.3 -0.2 18 19-36 9-26 (46)
288 2jrp_A Putative cytoplasmic pr 20.7 41 0.0014 23.2 1.5 39 175-221 3-41 (81)
289 2enc_A Zinc finger protein 224 20.7 19 0.00066 20.3 -0.2 18 19-36 9-26 (46)
290 2ri7_A Nucleosome-remodeling f 20.7 13 0.00043 28.8 -1.3 32 188-219 22-58 (174)
291 2eoe_A Zinc finger protein 347 20.7 20 0.00069 20.1 -0.1 19 19-37 9-27 (46)
292 2eml_A Zinc finger protein 28 20.6 19 0.00066 20.2 -0.2 19 19-37 9-27 (46)
293 1x64_A Alpha-actinin-2 associa 20.5 69 0.0023 21.4 2.7 40 172-222 23-62 (89)
294 2epu_A Zinc finger protein 32; 20.5 16 0.00054 20.6 -0.6 18 19-36 9-26 (45)
295 2l3k_A Rhombotin-2, linker, LI 20.4 54 0.0018 23.6 2.3 37 172-209 34-70 (123)
296 2eoz_A Zinc finger protein 473 20.4 16 0.00054 20.7 -0.6 19 19-37 9-27 (46)
297 2ep2_A Zinc finger protein 484 20.3 20 0.00068 20.2 -0.2 19 19-37 9-27 (46)
298 2ep3_A Zinc finger protein 484 20.1 20 0.00069 20.2 -0.2 18 19-36 9-26 (46)
299 2el4_A Zinc finger protein 268 20.1 20 0.0007 20.1 -0.1 18 20-37 10-27 (46)
300 1m3v_A FLIN4, fusion of the LI 20.0 88 0.003 22.3 3.4 51 172-223 30-81 (122)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.68 E-value=2.2e-17 Score=120.50 Aligned_cols=72 Identities=38% Similarity=0.799 Sum_probs=63.0
Q ss_pred hhccccCChhhhhcCCcccc-------cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 152 DLRMAINNKSNVTRLPEKRI-------ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 152 ~~~~~~~~k~~i~~lp~~~~-------~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.....+++++.++.+|...+ ..+..|+||+++|+.++.++.+||+|.||..||+.|++.+.+||+||.++++
T Consensus 11 ~~~~~~~s~~~i~~lp~~~~~~~~~~~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 11 MVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCCCCCCHHHHHTSCEEECCTTCSSSSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CcCCCCCCHHHHHhCCCeeecccccccCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 34566888999999987655 3567899999999988889999999999999999999999999999999875
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=5e-17 Score=114.12 Aligned_cols=53 Identities=38% Similarity=0.938 Sum_probs=48.8
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPAS 224 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~~ 224 (224)
.++..|+||+++++.++.++.+||+|.||..||..|++.+.+||+||.++.++
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 56778999999999888889999999999999999999999999999998753
No 3
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.59 E-value=5.5e-16 Score=102.08 Aligned_cols=51 Identities=39% Similarity=0.974 Sum_probs=46.8
Q ss_pred cCccccceeccccccCCeeEEcC-CCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp-C~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
+++.+|+||+++++.++.+..++ |+|.||.+||.+|++.+.+||+||.+++
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45678999999999888888898 9999999999999999999999999875
No 4
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.57 E-value=2.4e-15 Score=103.63 Aligned_cols=52 Identities=40% Similarity=0.990 Sum_probs=47.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
..+..|+||++.+..++.++.+||+|.||..||..|+..+.+||+||..+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 5677899999999888888999999999999999999999999999998864
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=3.1e-15 Score=104.41 Aligned_cols=51 Identities=33% Similarity=0.838 Sum_probs=47.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
..+..|+||++.+..+..+..+||+|.||..||..|++.+.+||+||.++.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVL 63 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCS
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccc
Confidence 567789999999988888888999999999999999999999999999875
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.54 E-value=3.6e-15 Score=105.13 Aligned_cols=52 Identities=38% Similarity=0.968 Sum_probs=47.7
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
..+..|+||++.|..++.++.++|+|.||..||..|++.+.+||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 5678999999999888888889999999999999999999999999998864
No 7
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.51 E-value=1.1e-14 Score=95.77 Aligned_cols=50 Identities=32% Similarity=0.812 Sum_probs=44.3
Q ss_pred CccccceeccccccC-CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 173 SEKDCAICLDGIVVG-QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~-~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+..|+||++.+..+ +.++.++|+|.||.+||..|++.+.+||+||.+++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 467899999999653 35788999999999999999999999999999886
No 8
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=7.5e-15 Score=104.83 Aligned_cols=51 Identities=29% Similarity=0.778 Sum_probs=41.7
Q ss_pred cCccccceecccccc-----------CCeeEEcC-CCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVV-----------GQLASCTP-CDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~-----------~~~~~~lp-C~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|+||++.|+. ++.++.++ |+|.||.+||++|++.+.+||+||.++.
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCC
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcc
Confidence 346668888888753 34466665 9999999999999999999999999875
No 9
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=2.9e-14 Score=97.60 Aligned_cols=53 Identities=32% Similarity=0.744 Sum_probs=45.9
Q ss_pred cCccccceeccccccC----CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCCC
Q 037450 172 ESEKDCAICLDGIVVG----QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPAS 224 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~----~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~~ 224 (224)
.+...|+||++.+... ..+..++|+|.||..||..|++.+.+||+||.++..+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~r 69 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 69 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCcC
Confidence 5678899999998643 3457899999999999999999999999999998753
No 10
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.46 E-value=2.2e-14 Score=98.94 Aligned_cols=52 Identities=33% Similarity=0.758 Sum_probs=45.2
Q ss_pred cCccccceeccccccC----CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVG----QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~----~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+... +.++.++|+|.||..||..|++.+.+||+||.++..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 5677899999998642 445789999999999999999999999999998864
No 11
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.44 E-value=3.1e-14 Score=96.00 Aligned_cols=51 Identities=33% Similarity=0.763 Sum_probs=44.2
Q ss_pred CccccceeccccccC----CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 173 SEKDCAICLDGIVVG----QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 173 ~~~~C~ICle~~~~~----~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
++..|+||++.++.. +.+..++|+|.||.+||..|++.+.+||+||.++..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 467899999999642 345788999999999999999999999999999864
No 12
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.44 E-value=4.5e-14 Score=106.39 Aligned_cols=51 Identities=31% Similarity=0.731 Sum_probs=41.6
Q ss_pred cCccccceeccccccCC---------------eeEEcCCCCcccHHHHHHHH-----hcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQ---------------LASCTPCDHVFHKRCIDFWL-----EKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~---------------~~~~lpC~H~FH~~CI~~Wl-----~~~~~CP~CR~~l~ 222 (224)
..+..|+||++.|..+. .++.++|+|.||..||..|+ ..+.+||+||..+.
T Consensus 23 ~~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 23 APEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 34568999999996543 34478999999999999999 45679999999874
No 13
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.41 E-value=1.1e-13 Score=94.79 Aligned_cols=49 Identities=31% Similarity=0.824 Sum_probs=43.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
..+..|+||++.++ +.++.+||+|.||..||..|++.+.+||+||.++.
T Consensus 3 ~~~~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 3 TVAERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCCCeeCCcccc--CCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 35678999999985 33578999999999999999999999999999875
No 14
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.41 E-value=1.1e-13 Score=103.84 Aligned_cols=50 Identities=32% Similarity=0.681 Sum_probs=43.2
Q ss_pred cCccccceeccccccCC---------------eeEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQ---------------LASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~---------------~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
.++..|+||++.|+..- .++.++|+|.||..||++||..+.+||+||.++
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcc
Confidence 46788999999997431 256789999999999999999999999999985
No 15
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.7e-13 Score=97.13 Aligned_cols=52 Identities=25% Similarity=0.658 Sum_probs=45.1
Q ss_pred ccCccccceeccccccCCe-eEEcCCCCcccHHHHHHHHhcC---CCCCCcccCCC
Q 037450 171 IESEKDCAICLDGIVVGQL-ASCTPCDHVFHKRCIDFWLEKS---RSCPLCRNDLP 222 (224)
Q Consensus 171 ~~~~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~~Wl~~~---~~CP~CR~~l~ 222 (224)
..+...|+||++.|..++. ++.++|+|.||..||..|++.+ ..||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 3667899999999976553 7889999999999999999986 68999999874
No 16
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.9e-13 Score=93.99 Aligned_cols=49 Identities=29% Similarity=0.496 Sum_probs=42.5
Q ss_pred cCccccceeccccccCCeeEEc-CCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT-PCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l-pC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+.. ++.+ +|+|.||..||..|++.+..||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 13 TPYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CGGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred CCCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 667899999999852 4454 999999999999999999999999998853
No 17
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.5e-13 Score=95.29 Aligned_cols=48 Identities=35% Similarity=0.747 Sum_probs=42.8
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|+||++.+. .++.++|+|.||..||..|+..+.+||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~---~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 13 LTVPECAICLQTCV---HPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIP 60 (71)
T ss_dssp SSCCBCSSSSSBCS---SEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCC
T ss_pred CCCCCCccCCcccC---CCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhC
Confidence 55778999999984 4577899999999999999999999999999875
No 18
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.2e-13 Score=95.31 Aligned_cols=48 Identities=40% Similarity=1.059 Sum_probs=43.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+...|+||++.+.. +.+||+|.||..||..|+..+.+||+||.++..
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccC
Confidence 567889999999853 779999999999999999999999999998864
No 19
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=4.3e-13 Score=95.75 Aligned_cols=51 Identities=29% Similarity=0.673 Sum_probs=43.3
Q ss_pred cCccccceeccccccCCeeEEcCCC-----CcccHHHHHHHHhcCC--CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCD-----HVFHKRCIDFWLEKSR--SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~-----H~FH~~CI~~Wl~~~~--~CP~CR~~l~~ 223 (224)
.++..|.||+++++.++.. .+||+ |.||.+||+.|+..+. +||+||.++..
T Consensus 13 ~~~~~C~IC~~~~~~~~~l-~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 70 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCE-ECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCC
T ss_pred CCCCCCeEcCccccCCCee-EeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeec
Confidence 4567899999999766654 69997 9999999999998774 89999998753
No 20
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.34 E-value=3.1e-13 Score=105.58 Aligned_cols=49 Identities=35% Similarity=0.880 Sum_probs=43.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.|. .++.+||||.||..||..|+..+.+||+||.++..
T Consensus 51 ~~~~~C~iC~~~~~---~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 51 ENELQCIICSEYFI---EAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HHHSBCTTTCSBCS---SEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred cccCCCcccCcccC---CceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 45678999999984 56789999999999999999999999999998853
No 21
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=5.4e-13 Score=91.03 Aligned_cols=49 Identities=24% Similarity=0.546 Sum_probs=41.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh-cCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE-KSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~-~~~~CP~CR~~l~~ 223 (224)
.+...|+||++.+. .+..++|+|.||..||..|+. ....||+||.++..
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLC---SPKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEES---SCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhc---CeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 56788999999985 345589999999999999995 56689999999864
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.1e-12 Score=90.97 Aligned_cols=49 Identities=33% Similarity=0.626 Sum_probs=42.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+. .+..++|+|.||..||..|++ ....||+||.++..
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccC---CeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 66789999999984 467789999999999999997 45589999999864
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.33 E-value=8.4e-13 Score=92.27 Aligned_cols=48 Identities=31% Similarity=0.611 Sum_probs=41.7
Q ss_pred cCccccceeccccccCCeeEEcC-CCCcccHHHHHHHHhcC--CCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKS--RSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp-C~H~FH~~CI~~Wl~~~--~~CP~CR~~l~ 222 (224)
.++..|+||++.|. .++.++ |+|.||..||..|++.+ ..||+||.++.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 66789999999995 456799 99999999999999876 58999999753
No 24
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.2e-12 Score=92.81 Aligned_cols=48 Identities=23% Similarity=0.459 Sum_probs=42.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.....|+||++.+. .+..++|+|.||..||..|++....||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQ---NPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCC---SEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhc---CeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 55778999999984 4567999999999999999999999999999874
No 25
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.30 E-value=1.6e-12 Score=91.29 Aligned_cols=49 Identities=18% Similarity=0.426 Sum_probs=42.9
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-CCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-SRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-~~~CP~CR~~l~~ 223 (224)
.++..|+||++.|+ .++.++|||.||..||..|+.. +.+||+||.++..
T Consensus 6 ~~~~~C~IC~~~~~---~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 6 PEYFRCPISLELMK---DPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCCCS---SEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred cccCCCCCcccccc---CCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 56789999999994 5677899999999999999987 6789999998753
No 26
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.29 E-value=2.3e-12 Score=91.29 Aligned_cols=50 Identities=34% Similarity=0.787 Sum_probs=43.0
Q ss_pred ccCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc------CCCCCCcccCCCC
Q 037450 171 IESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK------SRSCPLCRNDLPA 223 (224)
Q Consensus 171 ~~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~------~~~CP~CR~~l~~ 223 (224)
..++..|+||++.+. .+..++|+|.||..||..|+.. ...||+||..+..
T Consensus 16 ~~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 16 IKEEVTCPICLELLK---EPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCTTTSCTTTCSCCS---SCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred CccCCCCcCCChhhC---cceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 366789999999984 3467999999999999999988 6689999998863
No 27
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.29 E-value=3.1e-13 Score=103.18 Aligned_cols=50 Identities=32% Similarity=0.709 Sum_probs=1.7
Q ss_pred cCccccceeccccccC-------------C--eeEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVG-------------Q--LASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~-------------~--~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
..+..|+||++.|+.. + .+..++|+|.||..||++||+.+.+||+||.++
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~ 110 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 110 (117)
T ss_dssp CCC--------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCee
Confidence 4568899999999642 1 233468999999999999999999999999985
No 28
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.28 E-value=1e-12 Score=97.18 Aligned_cols=48 Identities=29% Similarity=0.670 Sum_probs=42.5
Q ss_pred cCccccceeccccccCCeeEE-cCCCCcccHHHHHHHHhcC-CCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASC-TPCDHVFHKRCIDFWLEKS-RSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~-lpC~H~FH~~CI~~Wl~~~-~~CP~CR~~l~ 222 (224)
.++..|+||++.+. .++. ++|+|.||..||..|+..+ .+||+||.++.
T Consensus 20 ~~~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 20 AEVFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HHHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 66788999999994 4566 9999999999999999988 69999999875
No 29
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=3.5e-12 Score=90.36 Aligned_cols=49 Identities=31% Similarity=0.691 Sum_probs=42.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc------CCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK------SRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~------~~~CP~CR~~l~~ 223 (224)
.+...|+||++.+. .+..++|+|.||..||..|+.. ...||+||..+..
T Consensus 17 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLT---QPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCS---SCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccC---CceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 66789999999985 3567899999999999999987 7799999998753
No 30
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.25 E-value=2.2e-12 Score=98.66 Aligned_cols=52 Identities=33% Similarity=0.758 Sum_probs=44.9
Q ss_pred cCccccceeccccccC----CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVG----QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~----~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.|+.. ..++.++|||.||.+||..|++.+.+||+||..+..
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 4567899999999643 445889999999999999999999999999998864
No 31
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.25 E-value=9.9e-13 Score=92.39 Aligned_cols=49 Identities=27% Similarity=0.613 Sum_probs=42.2
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-------CCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-------SRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-------~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+. .++.++|+|.||..||..|+.. ...||+||..+..
T Consensus 10 ~~~~~C~IC~~~~~---~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLT---EPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECS---SCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccC---CeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 56789999999985 3566899999999999999987 5689999998753
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.23 E-value=3.5e-12 Score=93.78 Aligned_cols=48 Identities=25% Similarity=0.618 Sum_probs=42.0
Q ss_pred cCccccceeccccccCCeeEEc-CCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT-PCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l-pC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+...|+||++.+. .+..+ +|+|.||..||..|+..+.+||+||..+.
T Consensus 20 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 20 DDLLRCGICFEYFN---IAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVT 68 (99)
T ss_dssp HHHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccCChhhC---CcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCC
Confidence 55778999999995 35555 89999999999999999999999999875
No 33
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.23 E-value=5.5e-12 Score=94.20 Aligned_cols=49 Identities=31% Similarity=0.640 Sum_probs=42.7
Q ss_pred cCccccceeccccccCCeeEEc-CCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT-PCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l-pC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+. .+..+ +|+|.||..||..|+..+..||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CCcCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 66789999999995 34555 999999999999999999999999998753
No 34
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=8.5e-12 Score=84.14 Aligned_cols=43 Identities=37% Similarity=0.681 Sum_probs=37.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cCCCCCCc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KSRSCPLC 217 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~~~CP~C 217 (224)
.++..|+||++.++ .++.++|+|.||..||..|++ ....||+|
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhC---CeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 67789999999985 467789999999999999998 45589998
No 35
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.22 E-value=4.4e-12 Score=96.99 Aligned_cols=49 Identities=33% Similarity=0.618 Sum_probs=42.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l~~ 223 (224)
.++..|+||++.+. .++.+||+|.||..||..|+..+. .||+||..+..
T Consensus 50 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVF---RPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCS---SEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHc---CcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 56778999999994 567789999999999999998655 89999998854
No 36
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.22 E-value=7e-12 Score=85.17 Aligned_cols=51 Identities=22% Similarity=0.585 Sum_probs=40.7
Q ss_pred Cccccceecc-ccccCCee-EEcCCCCcccHHHHHHHHhcC-CCCCCcccCCCC
Q 037450 173 SEKDCAICLD-GIVVGQLA-SCTPCDHVFHKRCIDFWLEKS-RSCPLCRNDLPA 223 (224)
Q Consensus 173 ~~~~C~ICle-~~~~~~~~-~~lpC~H~FH~~CI~~Wl~~~-~~CP~CR~~l~~ 223 (224)
++..|+||++ .+...... ..++|||.||..||+.|+... ..||+||..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 4568999999 77654432 468999999999999997654 579999998853
No 37
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.19 E-value=1.4e-11 Score=89.21 Aligned_cols=47 Identities=32% Similarity=0.636 Sum_probs=41.2
Q ss_pred cCccccceeccccccCCeeEEcC-CCCcccHHHHHHHHhcC--CCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKS--RSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp-C~H~FH~~CI~~Wl~~~--~~CP~CR~~l 221 (224)
.++..|+||++.|. .++.+| |+|.||..||..|+..+ ..||+||..+
T Consensus 11 ~~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEECS---SCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhhc---CceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 66789999999994 567899 99999999999999754 4899999986
No 38
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.18 E-value=7.5e-12 Score=95.65 Aligned_cols=52 Identities=33% Similarity=0.758 Sum_probs=45.1
Q ss_pred cCccccceeccccccC----CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVG----QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~----~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+...|+||++.++.. ..++.++|+|.||..||++|++.+.+||+||.++..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCCh
Confidence 5678899999998642 334788999999999999999999999999999864
No 39
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.2e-11 Score=81.71 Aligned_cols=43 Identities=35% Similarity=0.903 Sum_probs=36.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cCCCCCCc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KSRSCPLC 217 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~~~CP~C 217 (224)
.+...|+||++.++. ++.++|+|.||..||..|+. .+.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 567889999999953 46689999999999999954 56689998
No 40
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=1.7e-11 Score=86.20 Aligned_cols=49 Identities=31% Similarity=0.786 Sum_probs=42.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC--CCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS--RSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~--~~CP~CR~~l~ 222 (224)
+....|+||.+.+..++ +...|+|.||..||.+|++.+ .+||+||.+.+
T Consensus 13 ~~i~~C~IC~~~i~~g~--~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQ--SCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp SSSCBCSSSCCBCSSSE--ECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred CCCCcCcchhhHcccCC--ccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 45678999999997554 444899999999999999988 79999999865
No 41
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.16 E-value=1.1e-11 Score=92.57 Aligned_cols=49 Identities=39% Similarity=0.849 Sum_probs=41.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC---CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR---SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~---~CP~CR~~l~~ 223 (224)
.+...|+||++.+. .+..++|+|.||..||..|+..+. .||+||..+..
T Consensus 19 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 19 QKILECPICLELIK---EPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHTSCSSSCCCCS---SCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred cCCCCCcccChhhc---CeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 45678999999984 345689999999999999998764 89999998753
No 42
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=99.15 E-value=1.4e-11 Score=92.98 Aligned_cols=48 Identities=29% Similarity=0.525 Sum_probs=42.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-CCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-SRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-~~~CP~CR~~l~ 222 (224)
.++..|+||++.+. .+..++|+|.||..||..|+.. ..+||+||.++.
T Consensus 21 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 21 VKSISCQICEHILA---DPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCF 69 (116)
T ss_dssp HHHTBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred cCCCCCCCCCcHhc---CcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCC
Confidence 55788999999984 4567999999999999999997 678999999875
No 43
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.14 E-value=2e-11 Score=96.86 Aligned_cols=49 Identities=31% Similarity=0.573 Sum_probs=42.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l~~ 223 (224)
.+...|+||++.+. .+..++|+|.||..||..|+.... .||+||..+..
T Consensus 76 ~~~~~C~IC~~~~~---~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 76 EQSFMCVCCQELVY---QPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHHTBCTTTSSBCS---SEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred ccCCEeecCChhhc---CCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 55788999999984 566799999999999999999765 89999998864
No 44
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.13 E-value=1.6e-11 Score=98.31 Aligned_cols=49 Identities=37% Similarity=0.695 Sum_probs=41.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-CCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-SRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-~~~CP~CR~~l~ 222 (224)
.....|+||++.+. +.+..++|+|.||..||..|+.. +..||+||..+.
T Consensus 52 ~~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 52 HSELMCPICLDMLK--NTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHHBCTTTSSBCS--SEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCCcccChHhh--CcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 56779999999995 33333499999999999999997 678999999874
No 45
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.11 E-value=2.2e-11 Score=92.40 Aligned_cols=49 Identities=37% Similarity=0.634 Sum_probs=42.7
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l~~ 223 (224)
.++..|+||++.+. .+..++|+|.||..||..|+..+. +||+||.++..
T Consensus 16 ~~~~~C~IC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALR---EAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhc---CeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 66789999999984 457789999999999999998876 99999998753
No 46
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.10 E-value=5.4e-11 Score=85.52 Aligned_cols=49 Identities=18% Similarity=0.078 Sum_probs=44.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+...|+||++.| ..++.++|||+|+..||..|+..+.+||+||.++..
T Consensus 12 p~~~~CpI~~~~m---~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLM---TDPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBC---SSEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred chheECcccCchh---cCCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 5678999999999 567889999999999999999988899999998753
No 47
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.07 E-value=1.2e-11 Score=93.21 Aligned_cols=48 Identities=38% Similarity=0.806 Sum_probs=41.4
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-CCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-SRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-~~~CP~CR~~l~ 222 (224)
.++..|+||++.+. .++.++|+|.||..||..|+.. ...||+||..+.
T Consensus 13 ~~~~~C~iC~~~~~---~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 13 LSECQCGICMEILV---EPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHHHBCTTTCSBCS---SCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCCCccCCcccC---ceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 55778999999984 4677899999999999999987 568999999864
No 48
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.07 E-value=1e-10 Score=86.36 Aligned_cols=49 Identities=16% Similarity=0.055 Sum_probs=44.3
Q ss_pred cCccccceeccccccCCeeEEcCCC-CcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCD-HVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~-H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.| ..++.++|+ |.|+..||..|+..+.+||+||.++..
T Consensus 20 p~~~~CpI~~~~m---~dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLM---CDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBC---SSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cHhcCCcCccccc---cCCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 5678999999999 567889999 999999999999988899999998864
No 49
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.06 E-value=1e-10 Score=86.67 Aligned_cols=49 Identities=16% Similarity=0.096 Sum_probs=44.4
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+...|+||++.| ..++.++|||+|+..||..|+..+.+||+||.+++.
T Consensus 27 p~~~~CpI~~~~m---~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLM---TDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBC---SSEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcc---cCCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 5688999999999 567889999999999999999988899999998864
No 50
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=99.06 E-value=8.1e-11 Score=106.28 Aligned_cols=47 Identities=28% Similarity=0.816 Sum_probs=41.5
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHh-cCCCCCCcccCCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE-KSRSCPLCRNDLP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~-~~~~CP~CR~~l~ 222 (224)
....|+||++.+ ..++.+||+|.||..||..|+. .+.+||+||.++.
T Consensus 331 ~~~~C~ICle~~---~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~ 378 (389)
T 2y1n_A 331 TFQLCKICAEND---KDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIK 378 (389)
T ss_dssp SSSBCTTTSSSB---CCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCcCC---CCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccC
Confidence 347899999988 4578899999999999999999 6789999999875
No 51
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.01 E-value=1.5e-10 Score=78.74 Aligned_cols=48 Identities=19% Similarity=0.480 Sum_probs=40.4
Q ss_pred cCccccceeccccccCCeeEEc--CCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|.||++... .+..+ ||||. |+.+|+..|.+.+..||+||.++.
T Consensus 6 ~~~~~C~IC~~~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 6 NAIEPCVICQGRPK---NGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGGSCCTTTSSSCS---CEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CCcCCCCcCCCCCC---CEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 45678999999874 33444 99999 899999999999999999999874
No 52
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=91.70 Aligned_cols=47 Identities=19% Similarity=0.454 Sum_probs=41.4
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l 221 (224)
.++..|+||++.+. .++.++|||.||..||..|+.... +||+||.++
T Consensus 29 ~~~~~C~IC~~~~~---~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 29 EAKYLCSACRNVLR---RPFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred CcCcCCCCCChhhc---CcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 67889999999994 457789999999999999998775 899999975
No 53
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.98 E-value=8.7e-11 Score=77.73 Aligned_cols=45 Identities=22% Similarity=0.547 Sum_probs=38.4
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+...|+||++.+. .++.+||+|.||..||..| ...||+||..+.
T Consensus 4 ~~~~~C~IC~~~~~---~p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAK---CPKLLPCLHTLCSGCLEAS---GMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCB---CCSCSTTSCCSBTTTCSSS---SSSCSSCCSSSS
T ss_pred ccCCCceEeCCccC---CeEEcCCCCcccHHHHccC---CCCCCcCCcEee
Confidence 45678999999995 4578999999999999884 568999999875
No 54
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.95 E-value=3.2e-10 Score=80.35 Aligned_cols=51 Identities=22% Similarity=0.617 Sum_probs=39.9
Q ss_pred cCccccceeccccccCCeeEEcC--CCCcccHHHHHHHHhc-CCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP--CDHVFHKRCIDFWLEK-SRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp--C~H~FH~~CI~~Wl~~-~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+...+ +..+| |||.||..|+..++.. ...||.||..+..
T Consensus 9 ~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 56788999999885433 23444 9999999999998754 4589999998753
No 55
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.93 E-value=1.3e-10 Score=88.01 Aligned_cols=46 Identities=24% Similarity=0.637 Sum_probs=40.2
Q ss_pred cCccccceeccccccCCeeEEc-CCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT-PCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l-pC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+...|+||++.|. .+..+ +|||.||..||..|+. ..||+||..+.
T Consensus 20 ~~~~~C~IC~~~~~---~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 20 EKLLRCSRCTNILR---EPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HHTTSCSSSCSCCS---SCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred hhCCCCCCCChHhh---CccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 56789999999994 45667 8999999999999998 78999999874
No 56
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.92 E-value=4.8e-10 Score=76.02 Aligned_cols=48 Identities=19% Similarity=0.438 Sum_probs=39.8
Q ss_pred cCccccceeccccccCCeeEEc--CCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
+....|.||++... ....+ ||||. |+.+|+..|.+.+..||+||.++.
T Consensus 5 ~~~~~C~IC~~~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRPR---DGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSBS---CEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcCC---CeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 44668999999763 23344 99998 999999999998889999999875
No 57
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.92 E-value=2.1e-10 Score=80.17 Aligned_cols=44 Identities=32% Similarity=0.742 Sum_probs=38.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|+||++.+ ..+..+||+|. ||..|+..| ..||+||..+.
T Consensus 22 ~~~~~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~ 66 (74)
T 4ic3_A 22 QEEKLCKICMDRN---IAIVFVPCGHLVTCKQCAEAV----DKCPMCYTVIT 66 (74)
T ss_dssp HHHTBCTTTSSSB---CCEEEETTCCBCCCHHHHTTC----SBCTTTCCBCS
T ss_pred ccCCCCCCCCCCC---CCEEEcCCCChhHHHHhhhcC----ccCCCcCcCcc
Confidence 5567899999987 45678899999 999999998 78999999875
No 58
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.88 E-value=8.8e-10 Score=94.02 Aligned_cols=49 Identities=16% Similarity=0.218 Sum_probs=42.9
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l~~ 223 (224)
.....|+||++.| ..++++||||+||..||..|+..+. +||+||.+++.
T Consensus 206 ~~~~~c~i~~~~~---~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 206 PDYLCGKISFELM---REPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp CSTTBCTTTCSBC---SSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CcccCCcCcCCHh---cCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 5688999999999 5678899999999999999998754 59999998863
No 59
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.85 E-value=9.4e-10 Score=88.28 Aligned_cols=49 Identities=37% Similarity=0.634 Sum_probs=42.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~l~~ 223 (224)
.+...|+||++.+. .+..++|+|+||..||..|+..+. +||+||..+..
T Consensus 16 ~~~~~C~IC~~~~~---~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALR---EAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCS---SEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhc---CcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 66789999999994 456789999999999999998755 99999998753
No 60
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=1.4e-09 Score=79.40 Aligned_cols=46 Identities=22% Similarity=0.486 Sum_probs=39.2
Q ss_pred cCccccceeccccccCCeeEEcC-CCCcccHHHHHHHHhcC------CCCCC--cccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEKS------RSCPL--CRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp-C~H~FH~~CI~~Wl~~~------~~CP~--CR~~ 220 (224)
..+..|+||++.| ..++.++ |||+|+..||..|+..+ .+||+ |+..
T Consensus 5 ~~~~~CPI~~~~~---~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEM---KKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBC---SSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchh---cCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4567899999999 4577886 99999999999999864 48999 9865
No 61
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.77 E-value=1.5e-09 Score=96.20 Aligned_cols=52 Identities=25% Similarity=0.678 Sum_probs=40.8
Q ss_pred cCccccceecccccc-CCeeE----EcCCCCcccHHHHHHHHhcC-----------CCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVV-GQLAS----CTPCDHVFHKRCIDFWLEKS-----------RSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~-~~~~~----~lpC~H~FH~~CI~~Wl~~~-----------~~CP~CR~~l~~ 223 (224)
+...+|+||++.+.. +..+. -.+|+|.||..||.+|++.. .+||.||++++.
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 567899999999876 33221 24699999999999999753 369999998754
No 62
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=2.1e-09 Score=75.08 Aligned_cols=45 Identities=31% Similarity=0.720 Sum_probs=37.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCc-ccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHV-FHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.++..|+||++.+ ..+..+||+|. ||..|+.. ...||+||.++..
T Consensus 23 ~~~~~C~IC~~~~---~~~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 23 QEEKLCKICMDRN---IAIVFVPCGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHHHSCSSSCSSC---CCBCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCCCcCCCCC---CCEEEecCCCHHHHHHHhhC----CCCCccCCceecC
Confidence 4567899999987 45677999999 99999964 4789999998753
No 63
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.72 E-value=5.7e-09 Score=85.01 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=42.7
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC-CCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS-RSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~-~~CP~CR~~l~~ 223 (224)
.....|+||++.| ..++.+||||+|+..||..|+..+ .+||+||.+++.
T Consensus 104 p~~f~CPI~~elm---~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELM---REPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBC---SSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cHhhcccCccccC---CCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 5678999999999 457889999999999999999874 479999998863
No 64
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.68 E-value=9.3e-09 Score=74.70 Aligned_cols=50 Identities=28% Similarity=0.686 Sum_probs=40.2
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC--------CCCCC--cccC--CC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS--------RSCPL--CRND--LP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~--------~~CP~--CR~~--l~ 222 (224)
+..+|+||++++...+.+...+|+|.||.+||..++..+ ..||. |+.. ++
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~ 65 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQ 65 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEEC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccC
Confidence 466899999999765555556899999999999998642 37999 9988 54
No 65
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=1.6e-08 Score=69.53 Aligned_cols=44 Identities=32% Similarity=0.859 Sum_probs=37.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+...|.||++.. ..+..+||+|. ||..|+.. ...||+||..+.
T Consensus 13 ~~~~~C~IC~~~~---~~~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~ 57 (68)
T 2ea5_A 13 ENSKDCVVCQNGT---VNWVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQ 57 (68)
T ss_dssp CCSSCCSSSSSSC---CCCEETTTTBCCSCTTHHHH----CSSCTTTCCCCC
T ss_pred CCCCCCCCcCcCC---CCEEEECCCChhhhHHHHhc----CCCCCCCCcchh
Confidence 4577899999976 45788999999 99999984 578999999875
No 66
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.64 E-value=1.6e-08 Score=67.99 Aligned_cols=49 Identities=24% Similarity=0.637 Sum_probs=38.4
Q ss_pred cCccccceeccccccCCeeEEcCCC--C---cccHHHHHHHHhc--CCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCD--H---VFHKRCIDFWLEK--SRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~--H---~FH~~CI~~Wl~~--~~~CP~CR~~l~~ 223 (224)
++...|.||+++. ++. ..+||. | .||.+||..|+.. +.+||+||.++..
T Consensus 4 ~~~~~CrIC~~~~--~~~-l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 4 EDVPVCWICNEEL--GNE-RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CSCCEETTTTEEC--SCC-CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCEeEEeecCC--CCc-eecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 4567899999974 233 468965 4 9999999999975 4689999998764
No 67
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.62 E-value=6.7e-09 Score=73.50 Aligned_cols=44 Identities=25% Similarity=0.677 Sum_probs=37.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|+||++.+ ..+..+||||. ||..|+..| ..||+||..+.
T Consensus 16 ~~~~~C~IC~~~~---~~~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~ 60 (79)
T 2yho_A 16 KEAMLCMVCCEEE---INSTFCPCGHTVCCESCAAQL----QSCPVCRSRVE 60 (79)
T ss_dssp HHHTBCTTTSSSB---CCEEEETTCBCCBCHHHHTTC----SBCTTTCCBCC
T ss_pred CCCCEeEEeCccc---CcEEEECCCCHHHHHHHHHhc----CcCCCCCchhh
Confidence 4466899999987 45778999999 999999877 38999999874
No 68
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.47 E-value=5.6e-08 Score=65.45 Aligned_cols=47 Identities=15% Similarity=0.228 Sum_probs=40.5
Q ss_pred ccccceeccccccCCeeEEc-CCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 174 EKDCAICLDGIVVGQLASCT-PCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~~~~l-pC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
...|+||++.++ .+..+ +|||+|..+||.+|++.+.+||+.+.++..
T Consensus 3 ~~~CpIs~~~m~---dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 3 HMLCAISGKVPR---RPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp -CCCTTTCSCCS---SEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred eEEecCCCCCCC---CCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCCh
Confidence 457999999995 45667 899999999999999988899999998853
No 69
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.44 E-value=7.1e-08 Score=82.66 Aligned_cols=49 Identities=27% Similarity=0.533 Sum_probs=40.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC--CCCCC--cccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS--RSCPL--CRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~--~~CP~--CR~~l~ 222 (224)
..+..|+||++.|+ +-++.+.|||+|+..||..|++.+ .+||+ ||..+.
T Consensus 179 ~~el~CPIcl~~f~--DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 179 KIELTCPITCKPYE--APLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp BCCSBCTTTSSBCS--SEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred ceeeECcCccCccc--CCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 67889999999995 333345899999999999999865 37999 998764
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.43 E-value=3.6e-08 Score=87.94 Aligned_cols=44 Identities=30% Similarity=0.815 Sum_probs=38.9
Q ss_pred cCccccceeccccccCCeeEEcCCCCc-ccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHV-FHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~-FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.++..|+||++.+ ..+..+||||. ||..|+..| ..||+||.++.
T Consensus 293 ~~~~~C~IC~~~~---~~~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~ 337 (345)
T 3t6p_A 293 QEERTCKVCMDKE---VSVVFIPCGHLVVCQECAPSL----RKCPICRGIIK 337 (345)
T ss_dssp HTTCBCTTTSSSB---CCEEEETTCCEEECTTTGGGC----SBCTTTCCBCC
T ss_pred cCCCCCCccCCcC---CceEEcCCCChhHhHHHHhcC----CcCCCCCCCcc
Confidence 5678999999988 45677899999 999999988 68999999875
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=98.13 E-value=1.5e-06 Score=63.72 Aligned_cols=45 Identities=29% Similarity=0.583 Sum_probs=37.2
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-CCCCCCcccCCC
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-SRSCPLCRNDLP 222 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-~~~CP~CR~~l~ 222 (224)
-|++|--.+. ...+.+||+|+||.+|+..|.++ .++||.|+.++.
T Consensus 3 fC~~C~~Pi~--iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIK--VYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCS--EEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeE--EEeeeccccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 4778877664 55789999999999999999865 578999999874
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.77 E-value=1.3e-05 Score=67.78 Aligned_cols=48 Identities=29% Similarity=0.766 Sum_probs=40.1
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC--CCCCcccCCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR--SCPLCRNDLP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~--~CP~CR~~l~ 222 (224)
....|.||.+....| .+.-.|+|.||..|+..|++.+. .||.|+...+
T Consensus 179 ~i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~ 228 (238)
T 3nw0_A 179 AVKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 228 (238)
T ss_dssp TCCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCC
T ss_pred CCCcCcchhhHHhCC--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 477899999988755 34555999999999999998765 8999998765
No 73
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.27 E-value=0.011 Score=42.56 Aligned_cols=36 Identities=14% Similarity=0.484 Sum_probs=27.0
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHH-HH
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDF-WL 208 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~-Wl 208 (224)
++..|+||.+.+........+.|+|.||..|+.. |.
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 4568999998653333334599999999999998 53
No 74
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=94.70 E-value=0.019 Score=41.39 Aligned_cols=54 Identities=24% Similarity=0.596 Sum_probs=42.8
Q ss_pred CCcccccCccccceeccccccCCeeEEcCC-CCcccHHHHHHHHhcCCCCCCcccCCCCC
Q 037450 166 LPEKRIESEKDCAICLDGIVVGQLASCTPC-DHVFHKRCIDFWLEKSRSCPLCRNDLPAS 224 (224)
Q Consensus 166 lp~~~~~~~~~C~ICle~~~~~~~~~~lpC-~H~FH~~CI~~Wl~~~~~CP~CR~~l~~~ 224 (224)
.+....-.-..|..|+-+.+ ..+.| .|..|..|+..-|..+..||+|.++||++
T Consensus 20 ~~d~s~~G~~nCKsCWf~~k-----~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtk 74 (99)
T 2ko5_A 20 IPDATHLGPQFCKSCWFENK-----GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK 74 (99)
T ss_dssp SSSCCCSCCCCCCSSCSCCS-----SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCC
T ss_pred cCCccccCcccChhhccccC-----CeeeecchhhHHHHHHHHHhhccCCcccCCcCCcc
Confidence 44444566778999998753 23445 69999999999999999999999999874
No 75
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.61 E-value=0.02 Score=38.62 Aligned_cols=47 Identities=28% Similarity=0.559 Sum_probs=35.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~l 221 (224)
.....|.||.+ .++.+..-.|...||..|+++.|.... .||.|....
T Consensus 10 ~~~~~C~vC~~---~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 10 APGARCGVCGD---GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTCCCTTTSC---CTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCcCCCCC---CCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 34567999975 345555566999999999998876554 699998754
No 76
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=92.40 E-value=0.099 Score=36.90 Aligned_cols=38 Identities=24% Similarity=0.619 Sum_probs=25.5
Q ss_pred ccccCccccceeccccccCCeeEEcCCCCcccHHHHHHH
Q 037450 169 KRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFW 207 (224)
Q Consensus 169 ~~~~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~W 207 (224)
+.+..+..|.||-. +..++....--|+-.||..|+.+-
T Consensus 10 e~~~~D~~C~VC~~-~t~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 10 EPVVNDEMCDVCEV-WTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCCCSCCCTTTCC-CCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred cCCCCCcccCcccc-ccccceeccccccccccHhhcccc
Confidence 33467888999953 333333223338899999999986
No 77
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=90.27 E-value=0.14 Score=33.73 Aligned_cols=45 Identities=33% Similarity=0.919 Sum_probs=33.4
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC----CCCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS----RSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~----~~CP~CR~ 219 (224)
..+..|.||.+. ++.+..-.|...||..|+.+-+... -.||.|+.
T Consensus 9 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 567789999873 4555555699999999999855432 26999975
No 78
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=89.30 E-value=0.15 Score=32.03 Aligned_cols=44 Identities=27% Similarity=0.656 Sum_probs=30.3
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCccc
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRN 219 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~ 219 (224)
.|.||...-..++.+..-.|...||..|+++=+.... .||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 4888886533334445556999999999986444322 5999975
No 79
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=88.85 E-value=0.068 Score=35.23 Aligned_cols=47 Identities=30% Similarity=0.735 Sum_probs=33.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~l 221 (224)
..+..|.||.+. ++.+..-.|...||..|+.+-+.... .||.|+...
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 557779999862 34444455999999999987554332 699998754
No 80
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=88.18 E-value=0.16 Score=36.20 Aligned_cols=51 Identities=29% Similarity=0.565 Sum_probs=36.7
Q ss_pred CcccccCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccC
Q 037450 167 PEKRIESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRND 220 (224)
Q Consensus 167 p~~~~~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~ 220 (224)
.......+..|.+|... ++.+..-.|.-.||..|+.+=+.... .||.|+..
T Consensus 18 ~~~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 18 FGTLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp CCSSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred ccccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 33333677889999863 45555556999999999988665433 69999864
No 81
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=87.50 E-value=0.11 Score=35.47 Aligned_cols=50 Identities=22% Similarity=0.492 Sum_probs=34.2
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc----CCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK----SRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~----~~~CP~CR~~l 221 (224)
.+...|.||......+..+..-.|...||..|+..-... .-.||.|+..+
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 445669999876532233444559999999999765442 33699998754
No 82
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=86.63 E-value=0.099 Score=34.52 Aligned_cols=49 Identities=27% Similarity=0.661 Sum_probs=34.1
Q ss_pred cCccccceeccccccC-CeeEEcCCCCcccHHHHHHHHh-----cCCCCCCcccC
Q 037450 172 ESEKDCAICLDGIVVG-QLASCTPCDHVFHKRCIDFWLE-----KSRSCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~-~~~~~lpC~H~FH~~CI~~Wl~-----~~~~CP~CR~~ 220 (224)
.+...|+||...+..+ ..+..-.|...||..|+.--.. ....||.|+..
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 4567899999887433 3344556999999999854322 33479999764
No 83
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=85.52 E-value=0.22 Score=35.89 Aligned_cols=48 Identities=21% Similarity=0.430 Sum_probs=33.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc---CCCCCCcccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK---SRSCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~---~~~CP~CR~~ 220 (224)
.+...| ||......+..+..-.|.-.||..|+..=+.. ...||.|+..
T Consensus 26 ~d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 26 TDVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp CCBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CCCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 344567 89877655666666679999999999653322 2379999753
No 84
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=84.97 E-value=0.62 Score=46.37 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=42.8
Q ss_pred cCccccceeccccccCCeeEEcCCC-CcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCD-HVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~-H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+...|||-++.+ ..++.+|-| +.|-..+|..|+..+.+||.=|.++..
T Consensus 889 P~~F~cPIs~~lM---~DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 889 PDEFLDPLMYTIM---KDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp CGGGBCTTTCSBC---SSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred cHHhCCcchhhHH---hCCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCc
Confidence 5678899999988 567889987 699999999999999999999888753
No 85
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.02 E-value=0.08 Score=34.17 Aligned_cols=45 Identities=36% Similarity=0.848 Sum_probs=32.7
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~ 219 (224)
..+..|.||.+. ++.+..-.|...||..|+.+-+.... .||.|+.
T Consensus 7 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 557789999874 45555556999999999987554332 5888864
No 86
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=83.48 E-value=0.26 Score=36.05 Aligned_cols=47 Identities=28% Similarity=0.647 Sum_probs=32.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc----CCCCCCcc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK----SRSCPLCR 218 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~----~~~CP~CR 218 (224)
..+..|.||.+.=+..+.+..-.|...||..|+...+.. .-.||.|+
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 457789999875332333566679999999999887642 22566654
No 87
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=81.66 E-value=0.25 Score=32.69 Aligned_cols=52 Identities=19% Similarity=0.502 Sum_probs=35.4
Q ss_pred cCccccceecccccc--CCeeEEcCCCCcccHHHHHHHHh-------cCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVV--GQLASCTPCDHVFHKRCIDFWLE-------KSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~--~~~~~~lpC~H~FH~~CI~~Wl~-------~~~~CP~CR~~l~~ 223 (224)
.++..|.||...... +..+..-.|.-.||..|+.+-+. ..-.||.|......
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~ 64 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTT 64 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSC
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcccc
Confidence 456789999976432 33444455999999999986432 23379999876543
No 88
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=80.82 E-value=1.1 Score=30.74 Aligned_cols=49 Identities=22% Similarity=0.490 Sum_probs=32.2
Q ss_pred cCccccceeccccc-cCCeeEEcCCCCcccHHHHHHHHh-----cCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIV-VGQLASCTPCDHVFHKRCIDFWLE-----KSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~-~~~~~~~lpC~H~FH~~CI~~Wl~-----~~~~CP~CR~~l 221 (224)
.+...| ||...+. .+..+..-.|...||..|+.--.. ....||.|+...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 344556 8988764 233455556999999999842211 344799998754
No 89
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=80.58 E-value=0.46 Score=31.20 Aligned_cols=43 Identities=28% Similarity=0.599 Sum_probs=31.2
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCc
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLC 217 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~C 217 (224)
..|-.|...+.....++...|++.|+.+|=.-.-++-+.||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4599999988533346667799999999944434455689988
No 90
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=80.26 E-value=0.16 Score=33.93 Aligned_cols=46 Identities=35% Similarity=0.855 Sum_probs=33.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~ 220 (224)
..+..|.||.+. ++.+..-.|...||..|+.+-+.... .||.|...
T Consensus 6 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 456789999863 45555556999999999986544322 59999753
No 91
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=79.33 E-value=0.18 Score=32.94 Aligned_cols=45 Identities=36% Similarity=0.861 Sum_probs=32.3
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRND 220 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~ 220 (224)
.+..|.||... ++.+..-.|...||..|+.+-+.... .||.|...
T Consensus 4 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 4 HEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 46679999873 45555556999999999987554322 59988653
No 92
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=79.24 E-value=2.2 Score=32.87 Aligned_cols=46 Identities=28% Similarity=0.689 Sum_probs=34.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh-----------cCCCCCCcccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE-----------KSRSCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~-----------~~~~CP~CR~~ 220 (224)
..+..|.+|.+ .|+-+-.-.|-..||..||.+-+. ..-.||.|+..
T Consensus 61 g~~d~C~vC~~---GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 61 GMDEQCRWCAE---GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp SCBCSCSSSCC---CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCeecccCC---CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 55778999987 455555556999999999997653 12279999753
No 93
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=79.02 E-value=2.6 Score=30.77 Aligned_cols=46 Identities=26% Similarity=0.608 Sum_probs=29.7
Q ss_pred Cccccceecccc------ccCCeeEEcCCCCcccHHHHHH------HH-hcCCCCCCcc
Q 037450 173 SEKDCAICLDGI------VVGQLASCTPCDHVFHKRCIDF------WL-EKSRSCPLCR 218 (224)
Q Consensus 173 ~~~~C~ICle~~------~~~~~~~~lpC~H~FH~~CI~~------Wl-~~~~~CP~CR 218 (224)
....|.+|+..= +.++-+....|+..||..|+.. .+ ...-.||.|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 456799998752 1234456667999999999953 12 2333677774
No 94
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=76.58 E-value=0.46 Score=33.55 Aligned_cols=50 Identities=24% Similarity=0.585 Sum_probs=32.5
Q ss_pred ccCccccceecccc--ccCCeeEEcCCCCcccHHHHHHHHhc--CCCCCCcccC
Q 037450 171 IESEKDCAICLDGI--VVGQLASCTPCDHVFHKRCIDFWLEK--SRSCPLCRND 220 (224)
Q Consensus 171 ~~~~~~C~ICle~~--~~~~~~~~lpC~H~FH~~CI~~Wl~~--~~~CP~CR~~ 220 (224)
..++..|.||...- ..++.+..-.|.-.||..|+.+-+.. .-.||.|...
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 36778899998743 11223333458999999999764321 2269988764
No 95
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.97 E-value=0.61 Score=31.74 Aligned_cols=48 Identities=23% Similarity=0.497 Sum_probs=32.3
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHH---------HhcCCCCCCcccCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFW---------LEKSRSCPLCRNDL 221 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~W---------l~~~~~CP~CR~~l 221 (224)
....| ||......+..+..-.|...||..|+.-- ......||.|+..-
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 34567 89887653344555569999999998321 12456899998643
No 96
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.52 E-value=0.21 Score=35.67 Aligned_cols=48 Identities=27% Similarity=0.499 Sum_probs=33.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~ 219 (224)
.++..|.||...-..+..+..-.|...||..|+.+=|.... .||.|+.
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 55667999987643333444455999999999986444322 5999965
No 97
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=75.51 E-value=0.68 Score=33.96 Aligned_cols=47 Identities=32% Similarity=0.670 Sum_probs=31.0
Q ss_pred Cccccceeccc-cccCCeeEEcCCCCcccHHHHHHHHhcC----CCCCCccc
Q 037450 173 SEKDCAICLDG-IVVGQLASCTPCDHVFHKRCIDFWLEKS----RSCPLCRN 219 (224)
Q Consensus 173 ~~~~C~ICle~-~~~~~~~~~lpC~H~FH~~CI~~Wl~~~----~~CP~CR~ 219 (224)
+-..|.||.+. ...++.+..-.|...||..|+++-|... -.||.|+.
T Consensus 60 ~C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 60 ECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TTCCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred cCCccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 34468888764 2222333444599999999998765543 26999975
No 98
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=73.17 E-value=0.52 Score=32.55 Aligned_cols=44 Identities=34% Similarity=0.694 Sum_probs=28.8
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC-----CCCCCccc
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS-----RSCPLCRN 219 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~-----~~CP~CR~ 219 (224)
.|.||...-..+..+..-.|...||..|+.+-|... -.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 577777653333333344599999999998765432 36999975
No 99
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=72.92 E-value=3.2 Score=25.94 Aligned_cols=43 Identities=21% Similarity=0.446 Sum_probs=27.9
Q ss_pred ccceeccccccCC-eeEEc-CCCCcccHHHHHHH----HhcCCCCCCcc
Q 037450 176 DCAICLDGIVVGQ-LASCT-PCDHVFHKRCIDFW----LEKSRSCPLCR 218 (224)
Q Consensus 176 ~C~ICle~~~~~~-~~~~l-pC~H~FH~~CI~~W----l~~~~~CP~CR 218 (224)
.|.+|...+..+. .+..- .|...||..|+.-- ......||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4778888774333 33344 68899999997421 23556899985
No 100
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=71.31 E-value=2 Score=28.97 Aligned_cols=46 Identities=26% Similarity=0.729 Sum_probs=29.5
Q ss_pred cCccccceeccccccCCeeEEcC--CC-CcccHHHHHHHHhcC----CCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP--CD-HVFHKRCIDFWLEKS----RSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp--C~-H~FH~~CI~~Wl~~~----~~CP~CR~~l 221 (224)
.+...| ||.... .+..+..=. |. ..||..|+. |... -.||.|+..-
T Consensus 14 ~~~~~C-~C~~~~-~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 14 NEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp TSCCCS-TTCCCS-CSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCCEE-ECCCCC-CCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 455667 898753 244333334 55 699999997 3332 3699998754
No 101
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.15 E-value=0.83 Score=31.43 Aligned_cols=45 Identities=24% Similarity=0.595 Sum_probs=30.9
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-----CCCCCCccc
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-----SRSCPLCRN 219 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-----~~~CP~CR~ 219 (224)
..|.||...-..++.+..-.|...||..|+++=|.. .-.||.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 378999864333444444569999999999865443 236999965
No 102
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=71.12 E-value=1 Score=30.88 Aligned_cols=49 Identities=22% Similarity=0.502 Sum_probs=33.2
Q ss_pred cCccccceeccccccCCeeEEc--CCCCcccHHHHHHHH---------hcCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHVFHKRCIDFWL---------EKSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~FH~~CI~~Wl---------~~~~~CP~CR~~l 221 (224)
.+...| ||......+..+..- .|...||..|+.--- .....||.|+..-
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 456678 898875445545555 799999999985321 1345799998643
No 103
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.73 E-value=1.9 Score=30.63 Aligned_cols=46 Identities=26% Similarity=0.729 Sum_probs=29.5
Q ss_pred cCccccceeccccccCCeeEEcC--CC-CcccHHHHHHHHhc----CCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP--CD-HVFHKRCIDFWLEK----SRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp--C~-H~FH~~CI~~Wl~~----~~~CP~CR~~l 221 (224)
.+...| ||.... .++.+..=. |. ..||..|+. |.. .-.||.|+..-
T Consensus 34 ~e~~yC-iC~~~~-~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCBCS-TTCCBC-CSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCCcEE-ECCCCC-CCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 455667 998854 244333334 55 689999997 332 23799998754
No 104
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=68.62 E-value=1.1 Score=30.26 Aligned_cols=48 Identities=23% Similarity=0.578 Sum_probs=31.7
Q ss_pred cCccccceecccc--ccCCeeEEcCCCCcccHHHHHHHHhc--CCCCCCccc
Q 037450 172 ESEKDCAICLDGI--VVGQLASCTPCDHVFHKRCIDFWLEK--SRSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~--~~~~~~~~lpC~H~FH~~CI~~Wl~~--~~~CP~CR~ 219 (224)
..+..|.||.+.- ..++.+..-.|.-.||..|+..-... .-.||.|+.
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 5677899998753 22333444459999999999753221 226888865
No 105
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=68.04 E-value=1.1 Score=30.22 Aligned_cols=45 Identities=36% Similarity=0.722 Sum_probs=29.2
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-----CCCCCCcccC
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-----SRSCPLCRND 220 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-----~~~CP~CR~~ 220 (224)
.|.||...-..++.+..-.|...||..|+++=|.. .-.||.|+.+
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 56788754222333344458999999999865543 2369999753
No 106
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=67.86 E-value=0.74 Score=30.89 Aligned_cols=47 Identities=19% Similarity=0.565 Sum_probs=31.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cCCCCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KSRSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~~~CP~CR~ 219 (224)
.+...| ||......+..+..-.|...||..|+.--.. ....||.|+.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 456678 9988664333455556999999999854221 2347999965
No 107
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=65.84 E-value=5.5 Score=30.11 Aligned_cols=45 Identities=31% Similarity=0.741 Sum_probs=31.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHH------hc-----CCCCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWL------EK-----SRSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl------~~-----~~~CP~CR~ 219 (224)
..+..|.||.+- |+-+-.=.|-..||.+||.+-+ +. .-.|+.|+.
T Consensus 55 g~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 55 GMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 456779999873 3444444589999999999742 21 237999965
No 108
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=62.70 E-value=1.6 Score=36.18 Aligned_cols=47 Identities=34% Similarity=0.658 Sum_probs=28.0
Q ss_pred ccccceeccccccCCeeEEcCCCCcccHHHHHHHHhc-----CCCCCCcccC
Q 037450 174 EKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEK-----SRSCPLCRND 220 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~-----~~~CP~CR~~ 220 (224)
+..|.+|...=..+..+..-.|...||..|+++=|.. .-.||.|+.+
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 3368899864323344445559999999999965543 2369999753
No 109
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=61.12 E-value=4.6 Score=29.48 Aligned_cols=33 Identities=33% Similarity=0.751 Sum_probs=23.1
Q ss_pred cccceeccccc-------cCCeeEEcCCCCcccHHHHHHH
Q 037450 175 KDCAICLDGIV-------VGQLASCTPCDHVFHKRCIDFW 207 (224)
Q Consensus 175 ~~C~ICle~~~-------~~~~~~~lpC~H~FH~~CI~~W 207 (224)
..|.||+..-. .++-+....|...||..|+...
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 46999987531 1234556669999999999754
No 110
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=60.73 E-value=0.53 Score=31.45 Aligned_cols=46 Identities=28% Similarity=0.566 Sum_probs=28.6
Q ss_pred CccccceeccccccCCeeEEc--CCCCcccHHHHHHH---Hh-----cCCCCCCccc
Q 037450 173 SEKDCAICLDGIVVGQLASCT--PCDHVFHKRCIDFW---LE-----KSRSCPLCRN 219 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~l--pC~H~FH~~CI~~W---l~-----~~~~CP~CR~ 219 (224)
+...| ||......+..+..= .|...||..|+.-- .. .+..||.||.
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 34557 797765555544443 38899999997321 01 1357999974
No 111
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=58.99 E-value=8.1 Score=34.30 Aligned_cols=48 Identities=19% Similarity=0.436 Sum_probs=32.3
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cC--CCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KS--RSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~--~~CP~CR~~l~ 222 (224)
.-...|++=...++ .-++-..|.|.-|.+ ++.||. +. -.||+|...+.
T Consensus 247 ~vSL~CPlS~~ri~--~PvRg~~C~HlQCFD-l~sfL~~~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 247 IMSLQCPISYTRMK--YPSKSINCKHLQCFD-ALWFLHSQLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp EEESBCTTTSSBCS--SEEEETTCCSSCCEE-HHHHHHHHHHSCCCBCTTTCCBCC
T ss_pred EEeecCCCcccccc--ccCcCCcCCCcceEC-HHHHHHHhhcCCceeCCCCCcccC
Confidence 44678998888775 456778899995444 233443 22 37999988764
No 112
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=57.25 E-value=8.1 Score=26.92 Aligned_cols=39 Identities=18% Similarity=0.374 Sum_probs=29.2
Q ss_pred cCccccceeccccccCCeeEEcC-CCCcccHHHHHHHHhc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP-CDHVFHKRCIDFWLEK 210 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp-C~H~FH~~CI~~Wl~~ 210 (224)
.....|.+|.|.++...-+..-. =.|.||..|-...++.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHh
Confidence 45678999999997655433222 4799999999888874
No 113
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=57.14 E-value=0.93 Score=30.50 Aligned_cols=49 Identities=24% Similarity=0.409 Sum_probs=32.6
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHHHH----hcCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDFWL----EKSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~Wl----~~~~~CP~CR~~l 221 (224)
.+...| ||......+. .+..-.|...||..|+.--. .....||.|+..-
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred CcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 455678 7988754443 44555699999999985431 2334799997643
No 114
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=56.56 E-value=1.3 Score=32.21 Aligned_cols=45 Identities=24% Similarity=0.575 Sum_probs=29.2
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcC----CCCCCccc
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKS----RSCPLCRN 219 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~----~~CP~CR~ 219 (224)
..|.+|...-.....+..-.|...||..|+++=+... -.||.|+.
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 3577777653322344445599999999998755432 25888865
No 115
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=56.06 E-value=1.7 Score=28.22 Aligned_cols=44 Identities=30% Similarity=0.770 Sum_probs=27.2
Q ss_pred cCccccceeccccccCCeeEEcC--CC-CcccHHHHHHHHhc----CCCCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP--CD-HVFHKRCIDFWLEK----SRSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp--C~-H~FH~~CI~~Wl~~----~~~CP~CR~ 219 (224)
.+...| ||.... .++.+..=. |. ..||..|+. |.. .-.||.|+.
T Consensus 7 ~e~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 344556 898753 344333344 65 699999997 332 236999865
No 116
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=55.86 E-value=9.9 Score=33.62 Aligned_cols=48 Identities=17% Similarity=0.386 Sum_probs=32.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh---cC--CCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE---KS--RSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~---~~--~~CP~CR~~l~ 222 (224)
.-...|++=...++ .-++-..|.|.=|.+ +..||. +. -.||+|...+.
T Consensus 213 ~vSL~CPlS~~ri~--~P~Rg~~C~HlqCFD-l~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 213 RVSLMCPLGKMRLT--IPCRAVTCTHLQCFD-AALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp EEESBCTTTCSBCS--SEEEETTCCCCCCEE-HHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred EEeeeCCCccceec--cCCcCCCCCCCccCC-HHHHHHHHhhCCCeECCCCCcccC
Confidence 44668998887775 446778899994444 233433 32 37999998765
No 117
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=55.00 E-value=6.3 Score=28.71 Aligned_cols=44 Identities=32% Similarity=0.743 Sum_probs=29.6
Q ss_pred cCccccceeccccccCCeeEEc--CCCCcccHHHHHHHHhcCC----CCCCcccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHVFHKRCIDFWLEKSR----SCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~FH~~CI~~Wl~~~~----~CP~CR~~ 220 (224)
..+..|.+|.+ .|+.+..- .|-..||..|+. |.... .||.|+-.
T Consensus 13 ~~~~~C~~C~~---~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 13 MHEDYCFQCGD---GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp SSCSSCTTTCC---CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCCCCCcCCC---CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 56778999984 34444443 488999999997 44332 58877643
No 118
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=54.93 E-value=8.9 Score=25.20 Aligned_cols=33 Identities=27% Similarity=0.698 Sum_probs=23.3
Q ss_pred cCccccceeccccccCC-eeEEc-CCCCcccHHHH
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCT-PCDHVFHKRCI 204 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~l-pC~H~FH~~CI 204 (224)
.....|++|...+..+. .+..- .|.-.||..|+
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cv 40 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICT 40 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhcc
Confidence 45667999999875443 33445 79999999997
No 119
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=54.13 E-value=2.4 Score=21.20 Aligned_cols=15 Identities=0% Similarity=-0.261 Sum_probs=12.6
Q ss_pred ccCCCCCCCCchhhh
Q 037450 20 NQLWDLPNMQPGFIF 34 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~ 34 (224)
+.|+.|+.|++.|..
T Consensus 1 ek~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 1 EKPFSCSLCPQRSRD 15 (27)
T ss_dssp CCCEECSSSSCEESS
T ss_pred CcCccCCCcChhhCC
Confidence 357889999999976
No 120
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=53.76 E-value=11 Score=25.91 Aligned_cols=36 Identities=19% Similarity=0.334 Sum_probs=26.0
Q ss_pred cCccccceeccccccCCe-eEEcCCCCcccHHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQL-ASCTPCDHVFHKRCIDFW 207 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~~W 207 (224)
.+...|.+|...|..-.. -..-.||++||..|....
T Consensus 19 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 19 EDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 566789999999964332 233459999999996543
No 121
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=53.75 E-value=4.8 Score=19.92 Aligned_cols=14 Identities=14% Similarity=0.135 Sum_probs=11.8
Q ss_pred cCCCCCCCCchhhh
Q 037450 21 QLWDLPNMQPGFIF 34 (224)
Q Consensus 21 ~~~~~~~~~~~~~~ 34 (224)
.|+.|+.|+++|..
T Consensus 1 k~~~C~~C~~~f~~ 14 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQ 14 (29)
T ss_dssp CCCCCSSCCCCCCT
T ss_pred CCCcCCCCCcccCC
Confidence 36889999999976
No 122
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=52.87 E-value=1.1 Score=32.87 Aligned_cols=46 Identities=30% Similarity=0.620 Sum_probs=31.4
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCC----CCCCcccC
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSR----SCPLCRND 220 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~----~CP~CR~~ 220 (224)
..|.||...-..++.+..-.|...||..|+.+=|.... .||.|+..
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 46888877543445555556999999999986444322 58888653
No 123
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=52.59 E-value=2 Score=27.94 Aligned_cols=43 Identities=28% Similarity=0.768 Sum_probs=26.3
Q ss_pred CccccceeccccccCCeeEEcC--CC-CcccHHHHHHHHhcC----CCCCCccc
Q 037450 173 SEKDCAICLDGIVVGQLASCTP--CD-HVFHKRCIDFWLEKS----RSCPLCRN 219 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lp--C~-H~FH~~CI~~Wl~~~----~~CP~CR~ 219 (224)
+...| ||.... .+..+..=. |. ..||..|+. |... -.||.|+.
T Consensus 9 e~~~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcC-CCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 44556 898753 243333333 44 689999997 3332 26998864
No 124
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=52.28 E-value=1.2 Score=31.37 Aligned_cols=49 Identities=24% Similarity=0.609 Sum_probs=33.2
Q ss_pred cCccccceecccccc--CCeeEEcCCCCcccHHHHHHHHh--------cCCCCCCcccC
Q 037450 172 ESEKDCAICLDGIVV--GQLASCTPCDHVFHKRCIDFWLE--------KSRSCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~--~~~~~~lpC~H~FH~~CI~~Wl~--------~~~~CP~CR~~ 220 (224)
+.+..|.||...-.. +..+..=.|...||..|+.+-|. ..-.||.|+..
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 456789999975321 23344445999999999987553 12379988753
No 125
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=52.24 E-value=4.7 Score=21.76 Aligned_cols=17 Identities=12% Similarity=0.196 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 8 ~~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFSRS 24 (37)
T ss_dssp CSSSBCCTTTCCCBSSH
T ss_pred CCCCccCCCCCcccCcH
Confidence 35789999999999873
No 126
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=50.72 E-value=7.6 Score=25.55 Aligned_cols=46 Identities=11% Similarity=0.043 Sum_probs=29.0
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccH-HHHHHHHhcCCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHK-RCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~-~CI~~Wl~~~~~CP~CR~~l 221 (224)
.+-..|..|...+..+.-. ..=+..||. .|... .....|-.|...+
T Consensus 25 ~~CF~C~~C~~~L~~~~~~--~~~g~~yC~~~cy~~--~f~~~C~~C~~~~ 71 (76)
T 1iml_A 25 RPCLKCEKCGKTLTSGGHA--EHEGKPYCNHPCYSA--MFGPKGFGRGGAE 71 (76)
T ss_dssp TTTCBCTTTCCBCCTTTEE--EETTEEEETTTHHHH--HSSCCCSSCCCSS
T ss_pred CCCCCccccCccCCCCceE--CcCCeEeeCHHHHHH--HhCccCCCcCCce
Confidence 5667888888877654322 234677877 57755 4455687776544
No 127
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=50.64 E-value=3.1 Score=23.93 Aligned_cols=17 Identities=6% Similarity=-0.086 Sum_probs=15.0
Q ss_pred hhccCCCCCCCCchhhh
Q 037450 18 VRNQLWDLPNMQPGFIF 34 (224)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (224)
+.+.|..|+.|+++|.+
T Consensus 4 ~gekp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 4 LKPARFMCLPCGIAFSS 20 (36)
T ss_dssp SSCCCCEETTTTEECSC
T ss_pred CCccCeECCCCCCccCC
Confidence 45789999999999987
No 128
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.41 E-value=11 Score=24.78 Aligned_cols=38 Identities=24% Similarity=0.548 Sum_probs=20.3
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
..|+.|-+.+..++.+. .-+..||.+| ..|..|+.+|.
T Consensus 10 ~~C~~C~~~I~~~~~v~--a~~~~~H~~C--------F~C~~C~~~L~ 47 (76)
T 2cu8_A 10 SKCPKCDKTVYFAEKVS--SLGKDWHKFC--------LKCERCSKTLT 47 (76)
T ss_dssp CBCTTTCCBCCTTTEEE--ETTEEEETTT--------CBCSSSCCBCC
T ss_pred CCCcCCCCEeECCeEEE--ECCeEeeCCC--------CCCCCCCCccC
Confidence 45666666665444332 2355666655 23556655553
No 129
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=50.15 E-value=2 Score=26.87 Aligned_cols=41 Identities=20% Similarity=0.568 Sum_probs=26.1
Q ss_pred eeccccccCCeeEEcCCCCcccHHHHHHHH---hcCCCCCCccc
Q 037450 179 ICLDGIVVGQLASCTPCDHVFHKRCIDFWL---EKSRSCPLCRN 219 (224)
Q Consensus 179 ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl---~~~~~CP~CR~ 219 (224)
||......+..+..-.|+..||..|+.--. ...-.||.|+.
T Consensus 8 ~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EeCCcCCCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 576654323444455599999999985322 23347999875
No 130
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=47.86 E-value=2.7 Score=27.49 Aligned_cols=47 Identities=28% Similarity=0.733 Sum_probs=27.2
Q ss_pred cCccccceeccccccCCeeEEcC--CC-CcccHHHHHHHH--hcCCCCCCcccC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTP--CD-HVFHKRCIDFWL--EKSRSCPLCRND 220 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lp--C~-H~FH~~CI~~Wl--~~~~~CP~CR~~ 220 (224)
.+...| ||.... .++.+..=. |. ..||..|+.--- ...-.||.|+..
T Consensus 9 ~e~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 9 NEPTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp -CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred CCCcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 344556 898753 343333334 44 899999997211 112369999753
No 131
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=47.00 E-value=10 Score=27.37 Aligned_cols=48 Identities=25% Similarity=0.569 Sum_probs=31.9
Q ss_pred ccccceeccccccCCe-eEEc-CCCCcccHHHHHHH------H----hcCCCCCCcccCC
Q 037450 174 EKDCAICLDGIVVGQL-ASCT-PCDHVFHKRCIDFW------L----EKSRSCPLCRNDL 221 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~-~~~l-pC~H~FH~~CI~~W------l----~~~~~CP~CR~~l 221 (224)
...|.||...+..... +..= .|...||.+|+.-- + .....||.|+..-
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 4579999998754433 3333 58999999997321 1 0344799998653
No 132
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=45.73 E-value=3.9 Score=20.43 Aligned_cols=15 Identities=7% Similarity=0.047 Sum_probs=12.4
Q ss_pred ccCCCCCCCCchhhh
Q 037450 20 NQLWDLPNMQPGFIF 34 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~ 34 (224)
+.|..|+.|++.|..
T Consensus 1 ~k~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 1 MRPYSCSVCGKRFSL 15 (28)
T ss_dssp CCSEECSSSCCEESC
T ss_pred CcCccCCCCCcccCC
Confidence 357889999999886
No 133
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.09 E-value=7.1 Score=20.73 Aligned_cols=17 Identities=6% Similarity=-0.169 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.++.|+.|.+.|...
T Consensus 6 ~~~~~~C~~C~k~f~~~ 22 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKSK 22 (36)
T ss_dssp CCSSCBCTTTCCBCSSH
T ss_pred CCCCeecCcCCCCcCch
Confidence 35789999999999773
No 134
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=44.93 E-value=12 Score=25.56 Aligned_cols=35 Identities=20% Similarity=0.639 Sum_probs=25.1
Q ss_pred cCccccceeccccccCCe-eEEcCCCCcccHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQL-ASCTPCDHVFHKRCIDF 206 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~~ 206 (224)
.+...|.+|...|..-.. -..-.||++||..|...
T Consensus 17 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 17 DEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred ccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 455679999999964332 23345999999999754
No 135
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=44.79 E-value=25 Score=24.85 Aligned_cols=49 Identities=24% Similarity=0.671 Sum_probs=34.8
Q ss_pred CccccceeccccccCC----eeEEcCCCCcccHHHHHH-HHhcCCCCCCcccCC
Q 037450 173 SEKDCAICLDGIVVGQ----LASCTPCDHVFHKRCIDF-WLEKSRSCPLCRNDL 221 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~----~~~~lpC~H~FH~~CI~~-Wl~~~~~CP~CR~~l 221 (224)
....|.||-+++.... -+..--|+--.|..|.+- .-.-++.||.|+...
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrY 68 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRY 68 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcc
Confidence 4468999999875432 133444888889999864 345567899998865
No 136
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.46 E-value=3.2 Score=20.87 Aligned_cols=14 Identities=14% Similarity=0.138 Sum_probs=11.9
Q ss_pred cCCCCCCCCchhhh
Q 037450 21 QLWDLPNMQPGFIF 34 (224)
Q Consensus 21 ~~~~~~~~~~~~~~ 34 (224)
.|..|+.|+++|..
T Consensus 2 k~~~C~~C~k~f~~ 15 (27)
T 2kvg_A 2 APYRCPLCRAGCPS 15 (27)
T ss_dssp CTEEETTTTEEESC
T ss_pred cCcCCCCCCcccCC
Confidence 57789999999976
No 137
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=50.30 E-value=4.7 Score=19.79 Aligned_cols=13 Identities=8% Similarity=0.033 Sum_probs=11.5
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 6789999999987
No 138
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=44.12 E-value=12 Score=27.77 Aligned_cols=35 Identities=23% Similarity=0.605 Sum_probs=25.1
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDF 206 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~ 206 (224)
.+...|.+|...|..-. .-..-.||++||..|...
T Consensus 67 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 67 NEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 45568999999986432 223445999999999654
No 139
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=43.85 E-value=4.3 Score=22.44 Aligned_cols=11 Identities=36% Similarity=0.993 Sum_probs=8.1
Q ss_pred CCCCCcccCCC
Q 037450 212 RSCPLCRNDLP 222 (224)
Q Consensus 212 ~~CP~CR~~l~ 222 (224)
.+||+|+..+|
T Consensus 4 ~~CpvCk~q~P 14 (28)
T 2jvx_A 4 FCCPKCQYQAP 14 (28)
T ss_dssp EECTTSSCEES
T ss_pred ccCccccccCc
Confidence 46888887765
No 140
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=43.79 E-value=7.5 Score=19.24 Aligned_cols=14 Identities=14% Similarity=-0.026 Sum_probs=11.7
Q ss_pred CCCCCCCCchhhhh
Q 037450 22 LWDLPNMQPGFIFQ 35 (224)
Q Consensus 22 ~~~~~~~~~~~~~~ 35 (224)
|..|+.|++.|...
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 1ard_A 2 SFVCEVCTRAFARQ 15 (29)
T ss_dssp CCBCTTTCCBCSSH
T ss_pred CeECCCCCcccCCH
Confidence 67899999999773
No 141
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=43.58 E-value=4.5 Score=29.53 Aligned_cols=26 Identities=31% Similarity=0.841 Sum_probs=17.3
Q ss_pred eEEcCCCCcccHHHHHHHHhcCCCCCCcccC
Q 037450 190 ASCTPCDHVFHKRCIDFWLEKSRSCPLCRND 220 (224)
Q Consensus 190 ~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~ 220 (224)
++...||+.|. .=+.....||.|+++
T Consensus 68 ~~C~~CG~~F~-----~~~~kPsrCP~CkSe 93 (105)
T 2gmg_A 68 AQCRKCGFVFK-----AEINIPSRCPKCKSE 93 (105)
T ss_dssp CBBTTTCCBCC-----CCSSCCSSCSSSCCC
T ss_pred cChhhCcCeec-----ccCCCCCCCcCCCCC
Confidence 56677999991 112334579999985
No 142
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=43.20 E-value=14 Score=24.57 Aligned_cols=32 Identities=22% Similarity=0.513 Sum_probs=23.1
Q ss_pred ccccceeccccccCCe-eEEcCCCCcccHHHHH
Q 037450 174 EKDCAICLDGIVVGQL-ASCTPCDHVFHKRCID 205 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~ 205 (224)
+..|.+|...|..-.. -..-.||++||..|-.
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 4589999999864322 2334599999999964
No 143
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=43.12 E-value=13 Score=25.81 Aligned_cols=36 Identities=19% Similarity=0.463 Sum_probs=26.0
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDFW 207 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~W 207 (224)
.+...|.+|...|..-. .-..-.||++||..|...+
T Consensus 18 ~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 18 SEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp GGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred ccCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 45567999999986433 2334559999999997654
No 144
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=42.63 E-value=17 Score=24.34 Aligned_cols=41 Identities=27% Similarity=0.572 Sum_probs=25.6
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.....|+.|-+.+...+.++ .-+..||.+|. .|-.|+..|.
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF--------~C~~C~~~L~ 53 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLC--VNGHFFHRSCF--------RCHTCEATLW 53 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCC--BTTBCCBTTTC--------BCSSSCCBCC
T ss_pred CCCCCCcccCCCcccceEEE--ECCCeeCCCcC--------EEcCCCCCcC
Confidence 34567888888775444433 34677888773 4666665553
No 145
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=42.35 E-value=8.2 Score=21.88 Aligned_cols=12 Identities=8% Similarity=0.224 Sum_probs=9.7
Q ss_pred hhccCCCCCCCC
Q 037450 18 VRNQLWDLPNMQ 29 (224)
Q Consensus 18 ~~~~~~~~~~~~ 29 (224)
+|..||.||.|.
T Consensus 2 ~~~gDW~C~~C~ 13 (33)
T 2k1p_A 2 SSANDWQCKTCS 13 (33)
T ss_dssp CSSSSCBCSSSC
T ss_pred CCCCCcccCCCC
Confidence 467899999884
No 146
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=47.45 E-value=5.6 Score=19.97 Aligned_cols=14 Identities=14% Similarity=-0.019 Sum_probs=12.1
Q ss_pred cCCCCCCCCchhhh
Q 037450 21 QLWDLPNMQPGFIF 34 (224)
Q Consensus 21 ~~~~~~~~~~~~~~ 34 (224)
.|..|+.|++.|..
T Consensus 2 k~~~C~~C~k~f~~ 15 (30)
T 2lvr_A 2 KPYVCIHCQRQFAD 15 (30)
Confidence 57889999999977
No 147
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=41.27 E-value=8 Score=27.84 Aligned_cols=42 Identities=26% Similarity=0.563 Sum_probs=25.2
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.+..||+|..+++... ++.+|..|-.. +.....||.|.++|.
T Consensus 31 M~~~CP~Cq~eL~~~g-------~~~hC~~C~~~-f~~~a~CPdC~q~Le 72 (101)
T 2jne_A 31 MELHCPQCQHVLDQDN-------GHARCRSCGEF-IEMKALCPDCHQPLQ 72 (101)
T ss_dssp CCCBCSSSCSBEEEET-------TEEEETTTCCE-EEEEEECTTTCSBCE
T ss_pred ccccCccCCCcceecC-------CEEECccccch-hhccccCcchhhHHH
Confidence 4578999998874221 22234444221 244557999998873
No 148
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=40.98 E-value=14 Score=25.68 Aligned_cols=35 Identities=23% Similarity=0.551 Sum_probs=24.3
Q ss_pred cCccccceeccccccCCe-eEEcCCCCcccHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQL-ASCTPCDHVFHKRCIDF 206 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~~ 206 (224)
.+...|.+|...|..-.. -..-.||++||..|...
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred CcCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 445679999999864332 23345999999999654
No 149
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=40.85 E-value=5.3 Score=21.09 Aligned_cols=16 Identities=6% Similarity=-0.060 Sum_probs=13.5
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.++.|+.|+++|...
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 2elx_A 5 SSGYVCALCLKKFVSS 20 (35)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCcchhCCH
Confidence 5688999999999873
No 150
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.56 E-value=5.3 Score=21.41 Aligned_cols=17 Identities=0% Similarity=-0.160 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSK 22 (36)
T ss_dssp CCCSEECSSSSCEESCH
T ss_pred CCCCccCCCCCchhCCH
Confidence 35789999999999873
No 151
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=40.37 E-value=13 Score=28.11 Aligned_cols=34 Identities=15% Similarity=0.484 Sum_probs=25.5
Q ss_pred cCccccceeccccc-c-CCeeEEcCCCCcccHHHHH
Q 037450 172 ESEKDCAICLDGIV-V-GQLASCTPCDHVFHKRCID 205 (224)
Q Consensus 172 ~~~~~C~ICle~~~-~-~~~~~~lpC~H~FH~~CI~ 205 (224)
..+..|++|...|. . +......-|.|.+|..|-.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 45778999999883 2 3345667799999999844
No 152
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=40.33 E-value=13 Score=24.70 Aligned_cols=32 Identities=22% Similarity=0.554 Sum_probs=25.7
Q ss_pred cCccccceeccccccCCeeEEcCC-CCcccHHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPC-DHVFHKRCIDFW 207 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC-~H~FH~~CI~~W 207 (224)
++..-|.||.++ ..++.+.| +-.||..|...-
T Consensus 6 ee~pWC~ICneD----AtlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 6 SGLPWCCICNED----ATLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp CCCSSCTTTCSC----CCEEETTTTSEEECSSHHHHH
T ss_pred cCCCeeEEeCCC----CeEEecCCCCceehHHHHHHH
Confidence 456679999997 56889999 899999996553
No 153
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.81 E-value=21 Score=23.80 Aligned_cols=41 Identities=29% Similarity=0.521 Sum_probs=26.5
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.....|+-|-+.+..++.+.. -+..||.+| ..|-.|+..|.
T Consensus 13 ~~~~~C~~C~~~I~~~~~v~a--~~~~wH~~C--------F~C~~C~~~L~ 53 (80)
T 2dj7_A 13 RGPSHCAGCKEEIKHGQSLLA--LDKQWHVSC--------FKCQTCSVILT 53 (80)
T ss_dssp SSCSCCTTTCCCCSSSCCEEE--TTEEECTTT--------CBCSSSCCBCS
T ss_pred CCCCCCcCcCCeeCCCeEEEE--CCccccccc--------CCcCcCCCCcC
Confidence 345678888888765554443 367788776 35777776653
No 154
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=39.38 E-value=10 Score=19.46 Aligned_cols=15 Identities=7% Similarity=0.246 Sum_probs=12.3
Q ss_pred ccCCCCC--CCCchhhh
Q 037450 20 NQLWDLP--NMQPGFIF 34 (224)
Q Consensus 20 ~~~~~~~--~~~~~~~~ 34 (224)
+.|+.|+ .|+++|..
T Consensus 1 ek~~~C~~~~C~k~f~~ 17 (32)
T 1zfd_A 1 DRPYSCDHPGCDKAFVR 17 (32)
T ss_dssp CCSBCCCCTTCCCCBSS
T ss_pred CCCCcCcCCCCCCccCC
Confidence 3578898 89999986
No 155
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.67 E-value=16 Score=24.92 Aligned_cols=35 Identities=29% Similarity=0.637 Sum_probs=24.6
Q ss_pred cCccccceeccccccCCe-eEEcCCCCcccHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQL-ASCTPCDHVFHKRCIDF 206 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~-~~~lpC~H~FH~~CI~~ 206 (224)
.+...|.+|...|..-.. --.-.||.+||..|...
T Consensus 12 ~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 12 NNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 455689999999854321 22345999999999643
No 156
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=38.50 E-value=8.7 Score=18.70 Aligned_cols=13 Identities=8% Similarity=0.120 Sum_probs=10.2
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 1 ~~~C~~C~k~f~~ 13 (27)
T 1znf_A 1 XYKCGLCERSFVE 13 (27)
T ss_dssp -CBCSSSCCBCSS
T ss_pred CccCCCCCCcCCC
Confidence 4678999999876
No 157
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.75 E-value=6.5 Score=21.03 Aligned_cols=16 Identities=13% Similarity=0.262 Sum_probs=13.4
Q ss_pred hccCCCCCCCCchhhh
Q 037450 19 RNQLWDLPNMQPGFIF 34 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~ 34 (224)
.+.+..|+.|++.|..
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2els_A 6 SGKIFTCEYCNKVFKF 21 (36)
T ss_dssp CCCCEECTTTCCEESS
T ss_pred CCCCEECCCCCceeCC
Confidence 3568899999999976
No 158
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=37.56 E-value=13 Score=26.73 Aligned_cols=12 Identities=33% Similarity=0.908 Sum_probs=10.5
Q ss_pred cccHHHHHHHHh
Q 037450 198 VFHKRCIDFWLE 209 (224)
Q Consensus 198 ~FH~~CI~~Wl~ 209 (224)
-||..|+..|..
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 399999999986
No 159
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=37.44 E-value=13 Score=26.76 Aligned_cols=12 Identities=25% Similarity=0.880 Sum_probs=10.5
Q ss_pred cccHHHHHHHHh
Q 037450 198 VFHKRCIDFWLE 209 (224)
Q Consensus 198 ~FH~~CI~~Wl~ 209 (224)
-||..|+..|..
T Consensus 42 GFCRNCLskWy~ 53 (105)
T 2o35_A 42 GFCRNCLSNWYR 53 (105)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 399999999985
No 160
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=37.39 E-value=12 Score=18.49 Aligned_cols=13 Identities=0% Similarity=-0.291 Sum_probs=11.1
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
+..|+.|++.|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1klr_A 2 TYQCQYCEFRSAD 14 (30)
T ss_dssp CCCCSSSSCCCSC
T ss_pred CccCCCCCCccCC
Confidence 6789999999876
No 161
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.32 E-value=6.4 Score=21.23 Aligned_cols=16 Identities=13% Similarity=0.085 Sum_probs=13.6
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|..|+.|++.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCEECSSSSCEECSS
T ss_pred CCCeECCCCChhhccC
Confidence 5688999999999873
No 162
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.31 E-value=6.5 Score=20.90 Aligned_cols=17 Identities=6% Similarity=0.127 Sum_probs=13.9
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIK 22 (36)
T ss_dssp CCCSEECSSSSCEESSH
T ss_pred CCCCCCCCCCCcccCCH
Confidence 35688999999999873
No 163
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.78 E-value=12 Score=20.98 Aligned_cols=17 Identities=6% Similarity=-0.092 Sum_probs=14.4
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.++.|+.|++.|...
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (44)
T 2eou_A 9 AKTTSECQECGKIFRHS 25 (44)
T ss_dssp SSCCCCCTTTCCCCSSH
T ss_pred CCcCeECCCCCcccCCH
Confidence 46789999999999873
No 164
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=36.35 E-value=14 Score=29.82 Aligned_cols=35 Identities=20% Similarity=0.487 Sum_probs=25.2
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDF 206 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~ 206 (224)
.++..|.+|...|..-. .-..-.||++||..|-..
T Consensus 159 ~~~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 159 ADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp CCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCCCccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 34679999999986432 223445999999999654
No 165
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=36.25 E-value=6.8 Score=20.72 Aligned_cols=16 Identities=6% Similarity=-0.006 Sum_probs=13.5
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|..|+.|++.|...
T Consensus 5 ~k~~~C~~C~k~f~~~ 20 (35)
T 1srk_A 5 KRPFVCRICLSAFTTK 20 (35)
T ss_dssp CSCEECSSSCCEESSH
T ss_pred CcCeeCCCCCcccCCH
Confidence 5688999999999763
No 166
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.16 E-value=34 Score=22.47 Aligned_cols=39 Identities=28% Similarity=0.675 Sum_probs=20.0
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
..|+.|-+.+..++.+. ..-+..||.+|. .|-.|+.+|.
T Consensus 16 ~~C~~C~~~I~~~~~~~-~a~~~~~H~~CF--------~C~~C~~~L~ 54 (82)
T 1x63_A 16 PKCKGCFKAIVAGDQNV-EYKGTVWHKDCF--------TCSNCKQVIG 54 (82)
T ss_dssp CBCSSSCCBCCSSSCEE-ECSSCEEETTTC--------CCSSSCCCCT
T ss_pred CcCccCCcccccCceEE-EECccccccccC--------chhhCCCccC
Confidence 45666666665433321 223556666552 4555655553
No 167
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.65 E-value=13 Score=20.70 Aligned_cols=18 Identities=6% Similarity=-0.092 Sum_probs=14.8
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (44)
T 2en7_A 9 GMKPYVCNECGKAFRSKS 26 (44)
T ss_dssp SSSSSCCTTTCCCCSSHH
T ss_pred CCcCeECCCCCCccCCHH
Confidence 367899999999998743
No 168
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.32 E-value=7.8 Score=20.78 Aligned_cols=17 Identities=12% Similarity=0.215 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 6 ~~k~~~C~~C~k~f~~~ 22 (37)
T 2elo_A 6 SGRSYSCPVCEKSFSED 22 (37)
T ss_dssp CCCCCEETTTTEECSSH
T ss_pred CCCCcCCCCCCCccCCH
Confidence 35789999999999873
No 169
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=35.28 E-value=3.5 Score=30.77 Aligned_cols=46 Identities=24% Similarity=0.466 Sum_probs=26.8
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHHHHhcCCCCCCc
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDFWLEKSRSCPLC 217 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~Wl~~~~~CP~C 217 (224)
.+...|..|...|..-. +-..-.||.+||..|..........|-.|
T Consensus 17 ~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C 63 (120)
T 1y02_A 17 GLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLC 63 (120)
T ss_dssp ---CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHH
T ss_pred cccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHH
Confidence 44568999999985322 22345599999999966544333445444
No 170
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.06 E-value=12 Score=20.76 Aligned_cols=18 Identities=6% Similarity=-0.068 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|+.|+.|++.|...-
T Consensus 8 ~~k~~~C~~C~k~f~~~~ 25 (42)
T 2eos_A 8 GEKPYPCEICGTRFRHLQ 25 (42)
T ss_dssp SSCCBCCSSSCCCBSSHH
T ss_pred CCCCEECCCCCCccCCHH
Confidence 357899999999998743
No 171
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.06 E-value=6 Score=21.59 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=13.6
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|..|+.|++.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elm_A 7 GHLYYCSQCHYSSITK 22 (37)
T ss_dssp SCEEECSSSSCEEECH
T ss_pred CcCeECCCCCcccCCH
Confidence 5688999999999873
No 172
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=34.68 E-value=8.1 Score=22.28 Aligned_cols=9 Identities=44% Similarity=1.139 Sum_probs=4.4
Q ss_pred CCCCcccCC
Q 037450 213 SCPLCRNDL 221 (224)
Q Consensus 213 ~CP~CR~~l 221 (224)
.||+|...+
T Consensus 7 iCP~C~~~l 15 (34)
T 3mjh_B 7 ICPQCMKSL 15 (34)
T ss_dssp ECTTTCCEE
T ss_pred CCcHHHHHc
Confidence 355555443
No 173
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.40 E-value=29 Score=22.10 Aligned_cols=27 Identities=19% Similarity=0.559 Sum_probs=11.4
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHH
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRC 203 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~C 203 (224)
.|+.|-+.+..++.+ +..-+..||.+|
T Consensus 7 ~C~~C~~~I~~~~~~-~~a~~~~~H~~C 33 (72)
T 1wyh_A 7 GCSACGETVMPGSRK-LEYGGQTWHEHC 33 (72)
T ss_dssp BCSSSCCBCCSSSCE-ECSTTCCEETTT
T ss_pred CCccCCCccccCccE-EEECccccCccc
Confidence 455555554432211 122344555544
No 174
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=34.38 E-value=13 Score=18.54 Aligned_cols=13 Identities=8% Similarity=-0.021 Sum_probs=11.1
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1paa_A 2 AYACGLCNRAFTR 14 (30)
T ss_dssp CSBCTTTCCBCSS
T ss_pred CcCCcccCcccCC
Confidence 6789999999876
No 175
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=34.21 E-value=17 Score=23.46 Aligned_cols=10 Identities=40% Similarity=0.777 Sum_probs=5.1
Q ss_pred ccceeccccc
Q 037450 176 DCAICLDGIV 185 (224)
Q Consensus 176 ~C~ICle~~~ 185 (224)
.|+-|-+.+.
T Consensus 7 ~C~~C~~~I~ 16 (72)
T 1x4l_A 7 GCAGCTNPIS 16 (72)
T ss_dssp SBTTTTBCCC
T ss_pred CCcCCCcccc
Confidence 4555555543
No 176
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.06 E-value=14 Score=20.96 Aligned_cols=19 Identities=5% Similarity=-0.008 Sum_probs=15.3
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2yti_A 9 GEKPYKCNECGKVFTQNSH 27 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHH
T ss_pred CCcCeECCCCCcccCChhH
Confidence 3678999999999987433
No 177
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=34.06 E-value=16 Score=18.99 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=12.1
Q ss_pred CCCCCCCCchhhhh
Q 037450 22 LWDLPNMQPGFIFQ 35 (224)
Q Consensus 22 ~~~~~~~~~~~~~~ 35 (224)
|..|+.|++.|...
T Consensus 2 p~~C~~C~k~f~~~ 15 (32)
T 2kfq_A 2 AFACPACPKRFMRS 15 (32)
T ss_dssp CSSSSSSCTTHHHH
T ss_pred CCCCCCCCcccCCH
Confidence 67899999999874
No 178
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=33.62 E-value=19 Score=27.80 Aligned_cols=32 Identities=28% Similarity=0.623 Sum_probs=25.2
Q ss_pred Cccccceeccccc--cCCeeEEcCCCCcccHHHH
Q 037450 173 SEKDCAICLDGIV--VGQLASCTPCDHVFHKRCI 204 (224)
Q Consensus 173 ~~~~C~ICle~~~--~~~~~~~lpC~H~FH~~CI 204 (224)
.+..|++|...|. .+......-|.|.+|..|=
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~ 100 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS 100 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhcccc
Confidence 5789999999864 3344566779999999996
No 179
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.48 E-value=23 Score=22.61 Aligned_cols=13 Identities=15% Similarity=0.508 Sum_probs=6.0
Q ss_pred Cccccceeccccc
Q 037450 173 SEKDCAICLDGIV 185 (224)
Q Consensus 173 ~~~~C~ICle~~~ 185 (224)
+-..|..|...+.
T Consensus 30 ~CF~C~~C~~~L~ 42 (70)
T 2d8x_A 30 ECFRCDLCQEVLA 42 (70)
T ss_dssp TTSBCSSSCCBCS
T ss_pred cCCEeCCCCCcCC
Confidence 3344555544443
No 180
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=33.26 E-value=18 Score=29.51 Aligned_cols=36 Identities=19% Similarity=0.524 Sum_probs=26.0
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHHH
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDFW 207 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~W 207 (224)
..+..|.+|...|..-. .-..-.||++||..|-...
T Consensus 162 ~~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~ 198 (226)
T 3zyq_A 162 VDAEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY 198 (226)
T ss_dssp CCCSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE
T ss_pred ccCCCCcCcCCCCCccccccccCCCcCEeChhhcCCc
Confidence 34678999999996443 2334559999999996543
No 181
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=33.09 E-value=6.8 Score=36.01 Aligned_cols=46 Identities=22% Similarity=0.516 Sum_probs=30.3
Q ss_pred Cccccceeccccc-cCCeeEEcCCCCcccHHHHHHHHh-----cCCCCCCccc
Q 037450 173 SEKDCAICLDGIV-VGQLASCTPCDHVFHKRCIDFWLE-----KSRSCPLCRN 219 (224)
Q Consensus 173 ~~~~C~ICle~~~-~~~~~~~lpC~H~FH~~CI~~Wl~-----~~~~CP~CR~ 219 (224)
+...| ||...+. .+..+.+-.|.-.||..|+.---. ..-.||.|+.
T Consensus 36 ~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp CCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 34445 9988664 234455666999999999843221 2347999975
No 182
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=33.09 E-value=9 Score=18.96 Aligned_cols=14 Identities=7% Similarity=-0.024 Sum_probs=11.5
Q ss_pred cCCCCCCCCchhhh
Q 037450 21 QLWDLPNMQPGFIF 34 (224)
Q Consensus 21 ~~~~~~~~~~~~~~ 34 (224)
.|..|+.|++.|..
T Consensus 2 k~~~C~~C~~~f~~ 15 (30)
T 2m0d_A 2 KPYQCDYCGRSFSD 15 (30)
T ss_dssp CCEECTTTCCEESC
T ss_pred cCccCCCCCcccCC
Confidence 56789999999875
No 183
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.03 E-value=13 Score=21.00 Aligned_cols=19 Identities=5% Similarity=-0.008 Sum_probs=15.2
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2enf_A 9 GEKPYKCNECGKVFTQNSH 27 (46)
T ss_dssp CCCSCBCSSSCCBCSSHHH
T ss_pred CCcCeECCCCCcccCCHHH
Confidence 3678999999999987433
No 184
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.64 E-value=14 Score=20.25 Aligned_cols=18 Identities=6% Similarity=0.017 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 7 ~~k~~~C~~C~k~f~~~~ 24 (42)
T 2yte_A 7 GEKPYSCAECKETFSDNN 24 (42)
T ss_dssp SCCSCBCTTTCCBCSSHH
T ss_pred CCCCeECCCCCCccCCHH
Confidence 357899999999998743
No 185
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.40 E-value=9 Score=21.24 Aligned_cols=18 Identities=6% Similarity=0.084 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|+.|+.|++.|...-
T Consensus 8 ~~k~~~C~~C~k~f~~~~ 25 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVA 25 (42)
T ss_dssp SSCSEECTTTCCEESSHH
T ss_pred CCCCEeCCCcChhhCCHH
Confidence 357899999999998743
No 186
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=38.14 E-value=9.7 Score=18.95 Aligned_cols=13 Identities=8% Similarity=-0.154 Sum_probs=11.2
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2lvt_A 2 PCQCVMCGKAFTQ 14 (29)
Confidence 6789999999977
No 187
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.84 E-value=38 Score=21.56 Aligned_cols=10 Identities=30% Similarity=0.770 Sum_probs=5.0
Q ss_pred ccceeccccc
Q 037450 176 DCAICLDGIV 185 (224)
Q Consensus 176 ~C~ICle~~~ 185 (224)
.|+.|-+.+.
T Consensus 7 ~C~~C~~~I~ 16 (72)
T 1x4k_A 7 GCQECKKTIM 16 (72)
T ss_dssp CBSSSCCCCC
T ss_pred CCccCCCccc
Confidence 4555555443
No 188
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=31.59 E-value=21 Score=22.66 Aligned_cols=39 Identities=18% Similarity=0.591 Sum_probs=23.5
Q ss_pred ccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 174 EKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
...|+.|.+.+..++.++. .=+..||.+|. .|-.|..+|
T Consensus 11 ~~~C~~C~~~i~~~e~~~~-~~~~~~H~~CF--------~C~~C~~~L 49 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVN-SNGELYHEQCF--------VCAQCFQQF 49 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEE-ETTEEEETTTS--------SCTTTCCCC
T ss_pred CccchhcCccccCCceEEE-eCcCeeCcCCC--------cccCCCCCC
Confidence 4568888887755443321 34566777764 466666655
No 189
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=31.53 E-value=10 Score=25.27 Aligned_cols=12 Identities=17% Similarity=0.465 Sum_probs=5.8
Q ss_pred Cccccceecccc
Q 037450 173 SEKDCAICLDGI 184 (224)
Q Consensus 173 ~~~~C~ICle~~ 184 (224)
+-..|..|...+
T Consensus 33 ~CF~C~~C~~~L 44 (81)
T 1a7i_A 33 CCFLCMVCRKNL 44 (81)
T ss_dssp SSEECSSSCCEE
T ss_pred ccCccCCCCCCC
Confidence 344455555544
No 190
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.48 E-value=16 Score=20.10 Aligned_cols=17 Identities=6% Similarity=0.071 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|+.|+.|++.|...
T Consensus 8 ~~k~~~C~~C~k~f~~~ 24 (42)
T 2ytb_A 8 GEKPYRCDQCGKAFSQK 24 (42)
T ss_dssp SCCSBCCTTTTCCBSSH
T ss_pred CCCCeeCCCccchhCCH
Confidence 35789999999999874
No 191
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.29 E-value=17 Score=20.62 Aligned_cols=17 Identities=12% Similarity=0.131 Sum_probs=14.3
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 9 GERPFKCNECGKGFGRR 25 (46)
T ss_dssp CCCSCCCSSSCCCCSSH
T ss_pred CCCCeECCCCCcccCCH
Confidence 35789999999999874
No 192
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.19 E-value=9.2 Score=20.36 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=13.5
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|..|+.|++.|...
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (36)
T 2elv_A 7 GLLYDCHICERKFKNE 22 (36)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCccCCH
Confidence 5688999999999874
No 193
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.23 E-value=16 Score=20.59 Aligned_cols=18 Identities=6% Similarity=0.226 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|+.|+.|++.|...-
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eov_A 9 GEKPYKCSDCGKSFTWKS 26 (46)
T ss_dssp SCCSCBCSSSCCBCSSHH
T ss_pred CCCCccCCccChhhCCHH
Confidence 367899999999998743
No 194
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.68 E-value=18 Score=20.35 Aligned_cols=19 Identities=11% Similarity=0.238 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ep1_A 9 GEKPYECSDCGKSFIKKSQ 27 (46)
T ss_dssp SCCSSCCSSSCCCCSSHHH
T ss_pred CCCCcCCCCCCchhCCHHH
Confidence 4678999999999987433
No 195
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.60 E-value=19 Score=20.29 Aligned_cols=19 Identities=5% Similarity=0.036 Sum_probs=15.2
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eq1_A 9 GEKPYKCNECGKAFRAHSN 27 (46)
T ss_dssp CSCCCCCTTTTCCCSSHHH
T ss_pred CCCCeECCcCChhhCCHHH
Confidence 3678999999999987433
No 196
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=29.59 E-value=19 Score=18.81 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=11.2
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 p~~C~~C~k~F~~ 14 (33)
T 1rim_A 2 KFACPECPKRFMR 14 (33)
T ss_dssp CCCCSSSCCCCSS
T ss_pred cccCCCCCchhCC
Confidence 6789999999876
No 197
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.46 E-value=18 Score=20.46 Aligned_cols=19 Identities=5% Similarity=-0.010 Sum_probs=15.3
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2ytn_A 9 GKKPYKCNECGKVFTQNSH 27 (46)
T ss_dssp CCSSCBCTTTCCBCSSHHH
T ss_pred CCcCeECCCCCCeeCCHHH
Confidence 3678999999999987443
No 198
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.35 E-value=18 Score=20.45 Aligned_cols=18 Identities=6% Similarity=-0.023 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2emg_A 9 GENPFICSECGKVFTHKT 26 (46)
T ss_dssp SCCSCBCTTTCCBCSSHH
T ss_pred CCCCEECCccCcccCCHH
Confidence 357899999999998743
No 199
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.27 E-value=17 Score=20.57 Aligned_cols=18 Identities=11% Similarity=0.216 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRL 26 (46)
T ss_dssp CCSSCBCSSSCCBCSSHH
T ss_pred CCCCeeCcccCchhCCHH
Confidence 367899999999998743
No 200
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.25 E-value=19 Score=20.41 Aligned_cols=17 Identities=6% Similarity=-0.070 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQA 25 (46)
T ss_dssp CCSSCCCSSSCCCCSSH
T ss_pred CCCCcCCCCCCCeeCCh
Confidence 35789999999999874
No 201
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=29.25 E-value=11 Score=20.93 Aligned_cols=18 Identities=6% Similarity=0.028 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 7 ~~k~~~C~~C~k~f~~~~ 24 (42)
T 2el5_A 7 GENPYECSECGKAFNRKD 24 (42)
T ss_dssp SCCSEECSSSCCEESSHH
T ss_pred CCCCccCCCcChhhCCHH
Confidence 357899999999998743
No 202
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.17 E-value=19 Score=20.35 Aligned_cols=19 Identities=5% Similarity=0.060 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQTSK 27 (46)
T ss_dssp SSCSSSCCSSCCCCSSHHH
T ss_pred CCCCeECCCCCcccCCHHH
Confidence 3678999999999987433
No 203
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.11 E-value=17 Score=20.55 Aligned_cols=19 Identities=5% Similarity=0.037 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|+.|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2yth_A 9 GEKPFQCEECGKRFTQNSH 27 (46)
T ss_dssp CSSSBCCSSSCCCBSSHHH
T ss_pred CCcCCCCCCCCcccCCHHH
Confidence 3578999999999987433
No 204
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=28.98 E-value=23 Score=19.46 Aligned_cols=28 Identities=25% Similarity=0.488 Sum_probs=19.5
Q ss_pred ccccceeccccccCCeeEEcCCCCcccHHH
Q 037450 174 EKDCAICLDGIVVGQLASCTPCDHVFHKRC 203 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~~~~lpC~H~FH~~C 203 (224)
...|+.|-...-..+.+ +.-+..||..|
T Consensus 3 ~~~C~~C~k~Vy~~Ek~--~~~g~~~Hk~C 30 (31)
T 1zfo_A 3 NPNCARCGKIVYPTEKV--NCLDKFWHKAC 30 (31)
T ss_dssp CCBCSSSCSBCCGGGCC--CSSSSCCCGGG
T ss_pred CCcCCccCCEEecceeE--EECCeEecccC
Confidence 35799998876554433 34578899988
No 205
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.90 E-value=20 Score=20.17 Aligned_cols=18 Identities=6% Similarity=0.015 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytr_A 9 GEKPYKCNECGKAFSQTS 26 (46)
T ss_dssp SCCTTCCTTTCCCCSSHH
T ss_pred CCcCcCCCCCCCccCCHH
Confidence 367899999999998743
No 206
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=28.67 E-value=33 Score=26.75 Aligned_cols=36 Identities=25% Similarity=0.674 Sum_probs=26.4
Q ss_pred cCccccceeccccccCCeeEEc--CCCCcccHHHHHHHHhc
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHVFHKRCIDFWLEK 210 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~FH~~CI~~Wl~~ 210 (224)
..+..|.||-+- ++.+..- .|...||.+||+.++..
T Consensus 77 G~~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG~ 114 (159)
T 3a1b_A 77 GYQSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVGP 114 (159)
T ss_dssp SSBSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTCT
T ss_pred CCcceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcCH
Confidence 456789999873 3444444 58999999999998643
No 207
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=28.34 E-value=9.7 Score=25.36 Aligned_cols=17 Identities=29% Similarity=0.368 Sum_probs=12.6
Q ss_pred HHHHhcCCCCCCcccCC
Q 037450 205 DFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 205 ~~Wl~~~~~CP~CR~~l 221 (224)
++||..-..||.|+.+|
T Consensus 4 d~~LLeiL~CP~ck~~L 20 (67)
T 2jny_A 4 DPQLLEVLACPKDKGPL 20 (67)
T ss_dssp CGGGTCCCBCTTTCCBC
T ss_pred CHHHHHHhCCCCCCCcC
Confidence 45666677899998876
No 208
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.32 E-value=18 Score=20.51 Aligned_cols=18 Identities=6% Similarity=0.013 Sum_probs=14.8
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVSS 26 (46)
T ss_dssp SCCSCBCSSSCCBCSSHH
T ss_pred CCcccCCCCCCcccCcHH
Confidence 467899999999998743
No 209
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.16 E-value=19 Score=20.24 Aligned_cols=18 Identities=11% Similarity=0.154 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eop_A 9 GEKPHECRECGKSFSFNS 26 (46)
T ss_dssp CCCSCBCTTTCCBCSSHH
T ss_pred CCCCeeCCCCCchhCCHH
Confidence 357899999999998743
No 210
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=28.12 E-value=10 Score=26.78 Aligned_cols=46 Identities=22% Similarity=0.561 Sum_probs=27.1
Q ss_pred cCccccceeccccccCCeeEEcCCC---CcccHHHHHHHH--hcCCCCCC-ccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCD---HVFHKRCIDFWL--EKSRSCPL-CRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~---H~FH~~CI~~Wl--~~~~~CP~-CR~ 219 (224)
.+...| ||.... .++.+..=.|. ..||..|+.--- ...-.||. |+.
T Consensus 24 ~~~~yC-iC~~~~-~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVS-YGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCC-SSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCC-CCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 455667 998743 24433333454 789999985210 12336999 864
No 211
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=28.09 E-value=18 Score=20.46 Aligned_cols=19 Identities=5% Similarity=0.083 Sum_probs=15.2
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2emk_A 9 GEKPYECKECGKAFSQTTH 27 (46)
T ss_dssp SSCSCBCSSSCCBCSCHHH
T ss_pred CCCceECCCCCchhCCHHH
Confidence 3678999999999987433
No 212
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.07 E-value=12 Score=20.88 Aligned_cols=19 Identities=5% Similarity=-0.057 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (44)
T 2eoj_A 9 GENPYECCECGKVFSRKDQ 27 (44)
T ss_dssp SCCSCEETTTTEECSSHHH
T ss_pred CCcCeeCCCCCCccCCHHH
Confidence 3578999999999987433
No 213
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.90 E-value=21 Score=20.18 Aligned_cols=17 Identities=12% Similarity=0.198 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 9 GKKPYECKECRKTFIQI 25 (46)
T ss_dssp CSCSCCCSSSCCCCSSH
T ss_pred CCCCcCCCCcCchhCCH
Confidence 35789999999999874
No 214
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.80 E-value=11 Score=20.69 Aligned_cols=16 Identities=6% Similarity=0.239 Sum_probs=13.7
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.++.|+.|++.|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (41)
T 2ept_A 8 QRVYECQECGKSFRQK 23 (41)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCeECCCCCCCcCCH
Confidence 5788999999999874
No 215
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.62 E-value=19 Score=20.30 Aligned_cols=19 Identities=11% Similarity=0.146 Sum_probs=15.2
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (47)
T 2epx_A 9 GKKPYECIECGKAFIQNTS 27 (47)
T ss_dssp CCCSBCCSSSCCCBSSHHH
T ss_pred CCCCEECCccCchhCChHH
Confidence 3578999999999987443
No 216
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=27.60 E-value=13 Score=32.81 Aligned_cols=50 Identities=16% Similarity=0.366 Sum_probs=0.0
Q ss_pred cCccccceeccccccCC-eeEEcCCCCcccHHHHHHHHhc-------CCCCCCcccCC
Q 037450 172 ESEKDCAICLDGIVVGQ-LASCTPCDHVFHKRCIDFWLEK-------SRSCPLCRNDL 221 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~-~~~~lpC~H~FH~~CI~~Wl~~-------~~~CP~CR~~l 221 (224)
.+...|.+|...|.... ....-.||++||..|-..++.. ...|-.|-..+
T Consensus 373 ~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp ----------------------------------------------------------
T ss_pred ccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 45678999999885332 2234559999999998765421 22687776554
No 217
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.49 E-value=20 Score=20.26 Aligned_cols=18 Identities=6% Similarity=0.133 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 9 GEKPYECDVCRKAFSHHA 26 (46)
T ss_dssp CSSSCBCTTTCCBCSSSH
T ss_pred CCCCcCCCCcCchhCCHH
Confidence 467899999999998743
No 218
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.48 E-value=20 Score=20.29 Aligned_cols=18 Identities=11% Similarity=0.163 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQSS 26 (46)
T ss_dssp SSCCCBCTTTCCBCSSHH
T ss_pred CCCCEECCccCcccCCHH
Confidence 357899999999998743
No 219
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.45 E-value=37 Score=22.04 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=13.3
Q ss_pred cccceecccccc--CCeeEEcCCCCcccHHH
Q 037450 175 KDCAICLDGIVV--GQLASCTPCDHVFHKRC 203 (224)
Q Consensus 175 ~~C~ICle~~~~--~~~~~~lpC~H~FH~~C 203 (224)
..|+.|-+.+.. ...+ +..-+..||.+|
T Consensus 6 ~~C~~C~~~I~~~g~~~~-~~a~~~~wH~~C 35 (76)
T 1x68_A 6 SGCVACSKPISGLTGAKF-ICFQDSQWHSEC 35 (76)
T ss_dssp CCCTTTCCCCCTTTTCCE-EEETTEEEEGGG
T ss_pred CCCccCCCcccCCCCcee-EEECCcccCccc
Confidence 356666665542 1111 222355666655
No 220
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.42 E-value=21 Score=20.06 Aligned_cols=18 Identities=6% Similarity=-0.068 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~~~~~C~~C~k~f~~~~ 26 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRS 26 (46)
T ss_dssp SSCSCCCSSSCCCCSSHH
T ss_pred CCCCcCCCcCCchhCCHH
Confidence 367899999999998743
No 221
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=27.38 E-value=12 Score=20.65 Aligned_cols=17 Identities=6% Similarity=-0.027 Sum_probs=14.0
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|+.|+.|++.|...
T Consensus 8 ~~~~~~C~~C~k~f~~~ 24 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQR 24 (42)
T ss_dssp SSCCEECSSSCCEESSH
T ss_pred CCCCeECCCCCcccCCH
Confidence 35789999999999873
No 222
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.23 E-value=19 Score=20.09 Aligned_cols=17 Identities=12% Similarity=-0.054 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.++.|+.|++.|...
T Consensus 7 ~~k~~~C~~C~k~f~~~ 23 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEE 23 (43)
T ss_dssp SSCCBCCSSSCCCBSSH
T ss_pred CCCCEECCCCCCeeCCh
Confidence 35789999999999874
No 223
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.85 E-value=13 Score=20.90 Aligned_cols=18 Identities=6% Similarity=0.006 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 9 GENPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CCCSEECSSSSCEESSSH
T ss_pred CCCCeECCCCCchhCCHH
Confidence 467899999999998743
No 224
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.84 E-value=20 Score=20.28 Aligned_cols=18 Identities=6% Similarity=-0.044 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em6_A 9 GEKCYKCDVCGKEFSQSS 26 (46)
T ss_dssp CCCCCBCSSSCCBCSSHH
T ss_pred CCCCeECCCCCcccCCHH
Confidence 367899999999998743
No 225
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=26.76 E-value=22 Score=17.87 Aligned_cols=13 Identities=8% Similarity=-0.120 Sum_probs=10.7
Q ss_pred CCCCC--CCCchhhh
Q 037450 22 LWDLP--NMQPGFIF 34 (224)
Q Consensus 22 ~~~~~--~~~~~~~~ 34 (224)
|..|+ .|+++|..
T Consensus 2 p~~C~~~~C~k~f~~ 16 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTR 16 (31)
T ss_dssp CCBCCSTTCCCBCSS
T ss_pred CcCCcCCCCCcccCC
Confidence 67787 99999976
No 226
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=26.67 E-value=13 Score=20.90 Aligned_cols=11 Identities=9% Similarity=0.081 Sum_probs=8.5
Q ss_pred hccCCCCCCCC
Q 037450 19 RNQLWDLPNMQ 29 (224)
Q Consensus 19 ~~~~~~~~~~~ 29 (224)
+..||.||.|.
T Consensus 2 k~gDW~C~~C~ 12 (32)
T 2lk0_A 2 KFEDWLCNKCC 12 (32)
T ss_dssp CCSEEECTTTC
T ss_pred CCCCCCcCcCc
Confidence 45789999884
No 227
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=26.53 E-value=22 Score=19.96 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2em0_A 9 GEKTWKCRECDMCFSQASS 27 (46)
T ss_dssp CCCCCCCSSSCCCCSSHHH
T ss_pred CCcCeECCCCCcccCCHHH
Confidence 3678999999999987433
No 228
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.40 E-value=21 Score=20.00 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eq4_A 9 GEKLYNCKECGKSFSRAP 26 (46)
T ss_dssp CCCCCCBTTTTBCCSCHH
T ss_pred CCCCeECCCCCCccCchH
Confidence 367899999999998743
No 229
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=26.26 E-value=32 Score=26.81 Aligned_cols=26 Identities=23% Similarity=0.595 Sum_probs=16.4
Q ss_pred CeeEEcCCCCcccHHHHHHHHhcCCCCCCcccC
Q 037450 188 QLASCTPCDHVFHKRCIDFWLEKSRSCPLCRND 220 (224)
Q Consensus 188 ~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~ 220 (224)
...++..|||++-. ..-..||+|..+
T Consensus 137 ~~~~C~~CG~i~~~-------~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 137 KVYICPICGYTAVD-------EAPEYCPVCGAP 162 (170)
T ss_dssp CEEECTTTCCEEES-------CCCSBCTTTCCB
T ss_pred CeeEeCCCCCeeCC-------CCCCCCCCCCCC
Confidence 44566668887742 222389999764
No 230
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=26.04 E-value=26 Score=25.49 Aligned_cols=27 Identities=26% Similarity=0.646 Sum_probs=18.6
Q ss_pred CeeEEcCCCCcccHHHHHHHHhcCC-CCCCcccC
Q 037450 188 QLASCTPCDHVFHKRCIDFWLEKSR-SCPLCRND 220 (224)
Q Consensus 188 ~~~~~lpC~H~FH~~CI~~Wl~~~~-~CP~CR~~ 220 (224)
-..+...|+|.|-.+ .... .||.|..+
T Consensus 72 ~~~~C~~CG~~~e~~------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN------ALDYGVCEKCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC------CSTTCCCSSSSSC
T ss_pred ceEEcCCCCCEEeCC------CCCCCcCccccCC
Confidence 356677788887652 3456 79999875
No 231
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=25.87 E-value=14 Score=20.12 Aligned_cols=16 Identities=6% Similarity=-0.020 Sum_probs=13.3
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|..|+.|++.|...
T Consensus 4 ~k~~~C~~C~k~f~~~ 19 (39)
T 1njq_A 4 PRSYTCSFCKREFRSA 19 (39)
T ss_dssp SSSEECTTTCCEESSH
T ss_pred CCceECCCCCcccCCH
Confidence 4678999999999873
No 232
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.66 E-value=22 Score=19.96 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2epz_A 9 GEKPFDCIDCGKAFSDHIG 27 (46)
T ss_dssp CCCSBCCTTTCCCBSSHHH
T ss_pred CCCCeECCCCCceeCCHHH
Confidence 3578999999999987433
No 233
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.46 E-value=21 Score=20.10 Aligned_cols=18 Identities=6% Similarity=0.056 Sum_probs=14.7
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytq_A 9 GEKPYGCSECGKAFSSKS 26 (46)
T ss_dssp CCCSCBCSSSCCBCSCHH
T ss_pred CCCCcCCCccChhhCChH
Confidence 367899999999998743
No 234
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.41 E-value=24 Score=19.90 Aligned_cols=18 Identities=6% Similarity=0.039 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSY 26 (46)
T ss_dssp CCCTTCCSSSCCCCSSHH
T ss_pred CCCCeeCCCCCcccCCHH
Confidence 357899999999998743
No 235
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.40 E-value=13 Score=21.04 Aligned_cols=18 Identities=6% Similarity=0.144 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCSK 26 (46)
T ss_dssp CSCCEECSSSCCEESSSH
T ss_pred CCCCEECcCCCCcCCCHH
Confidence 357889999999998743
No 236
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.28 E-value=14 Score=20.89 Aligned_cols=19 Identities=5% Similarity=0.116 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.+..|+.|++.|.+.-+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWKSQ 27 (46)
T ss_dssp CCCSEECSSSCCEESSSHH
T ss_pred CCCCeeCCCCCCccCCHHH
Confidence 3568999999999987433
No 237
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.27 E-value=14 Score=20.82 Aligned_cols=18 Identities=11% Similarity=0.305 Sum_probs=14.4
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (44)
T 2epv_A 9 GEKPYECNECGKAFIWKS 26 (44)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCcCeECCCCCcccCchH
Confidence 356889999999998743
No 238
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=25.25 E-value=15 Score=17.94 Aligned_cols=13 Identities=8% Similarity=-0.082 Sum_probs=10.1
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2m0f_A 2 PLKCRECGKQFTT 14 (29)
T ss_dssp CEECTTTSCEESC
T ss_pred CccCCCCCCccCC
Confidence 5678889888865
No 239
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.19 E-value=30 Score=22.78 Aligned_cols=38 Identities=29% Similarity=0.502 Sum_probs=23.6
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
....|+.|-+.+.. +. +..-+..||.+|. .|-.|+..|
T Consensus 14 ~~~~C~~C~~~I~~-~~--~~a~~~~~H~~CF--------~C~~C~~~L 51 (79)
T 1x62_A 14 KLPMCDKCGTGIVG-VF--VKLRDRHRHPECY--------VCTDCGTNL 51 (79)
T ss_dssp CCCCCSSSCCCCCS-SC--EECSSCEECTTTT--------SCSSSCCCH
T ss_pred CCCccccCCCCccC-cE--EEECcceeCcCcC--------eeCCCCCCC
Confidence 35578888887753 22 2335678888773 466666554
No 240
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.03 E-value=38 Score=22.31 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=18.4
Q ss_pred ccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 174 EKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 174 ~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
...|+-|-+.+. +.. +..-+..||.+| .+|-.|+.+|.
T Consensus 15 ~~~C~~C~~~I~-~~~--v~a~~~~~H~~C--------F~C~~C~~~L~ 52 (79)
T 2cor_A 15 KYICQKCHAIID-EQP--LIFKNDPYHPDH--------FNCANCGKELT 52 (79)
T ss_dssp CCBCTTTCCBCC-SCC--CCCSSSCCCTTT--------SBCSSSCCBCC
T ss_pred CCCCccCCCEec-ceE--EEECcceeCCCC--------CEeCCCCCccC
Confidence 345666666554 221 122355566554 24555555543
No 241
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=24.99 E-value=20 Score=27.50 Aligned_cols=26 Identities=23% Similarity=0.608 Sum_probs=15.7
Q ss_pred eEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 190 ASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 190 ~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
++...|+|.|-.. .....||.|..++
T Consensus 133 y~C~~Cg~~~~~~------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 133 YVCIGCGRKFSTL------PPGGVCPDCGSKV 158 (165)
T ss_dssp EEESSSCCEESSC------CGGGBCTTTCCBE
T ss_pred EECCCCCCcccCC------CCCCcCCCCCCcc
Confidence 5566677777432 2233699998754
No 242
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=24.89 E-value=42 Score=29.89 Aligned_cols=45 Identities=27% Similarity=0.654 Sum_probs=31.5
Q ss_pred cCccccceeccccccCCeeEEc--CCCCcccHHHHHHHHhc----------CCCCCCccc
Q 037450 172 ESEKDCAICLDGIVVGQLASCT--PCDHVFHKRCIDFWLEK----------SRSCPLCRN 219 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~l--pC~H~FH~~CI~~Wl~~----------~~~CP~CR~ 219 (224)
..+..|.+|-+- ++-+..- .|...||.+||+..+.. .-.|=+|.-
T Consensus 91 G~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 91 GYQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SSBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CCcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 456678888763 3455555 69999999999998721 226777753
No 243
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=24.87 E-value=14 Score=18.10 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=10.4
Q ss_pred CCCCCCCCchhhh
Q 037450 22 LWDLPNMQPGFIF 34 (224)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (224)
|..|+.|++.|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 1rik_A 2 KFACPECPKRFMR 14 (29)
T ss_dssp CEECSSSSCEESC
T ss_pred CccCCCCCchhCC
Confidence 5678899998876
No 244
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=24.77 E-value=26 Score=20.74 Aligned_cols=15 Identities=7% Similarity=-0.117 Sum_probs=12.8
Q ss_pred hccCCCCCCCCchhh
Q 037450 19 RNQLWDLPNMQPGFI 33 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~ 33 (224)
.+.|+.|+.|+++|.
T Consensus 38 ~~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 38 SERPHKCQVWVSGPS 52 (54)
T ss_dssp CCCCCCSSSSCCSSC
T ss_pred CCCCccCCCCCCCCC
Confidence 467899999999985
No 245
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.55 E-value=24 Score=19.97 Aligned_cols=17 Identities=6% Similarity=-0.049 Sum_probs=14.3
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 9 GEKPYKCMECGKAFGDN 25 (46)
T ss_dssp SCCSSSBTTTTBCCSSH
T ss_pred CCCCcCCCCCCchhCCH
Confidence 46789999999999874
No 246
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.47 E-value=15 Score=20.54 Aligned_cols=17 Identities=12% Similarity=0.251 Sum_probs=14.1
Q ss_pred ccCCCCCCCCchhhhhh
Q 037450 20 NQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~ 36 (224)
+.+..|+.|++.|...-
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (44)
T 2emb_A 10 RKRYECSKCQATFNLRK 26 (44)
T ss_dssp CSSEECTTTCCEESCHH
T ss_pred CCCeECCCCCCccCCHH
Confidence 56889999999998743
No 247
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=24.39 E-value=24 Score=19.92 Aligned_cols=17 Identities=12% Similarity=0.167 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|+.|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRR 25 (46)
T ss_dssp CCCSBCCSSSCCCBSST
T ss_pred CCCCcccCccCcccCCH
Confidence 35789999999999874
No 248
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.34 E-value=15 Score=20.84 Aligned_cols=19 Identities=5% Similarity=0.114 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|+.|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQ 27 (46)
T ss_dssp SSCCEECSSSCCEESSHHH
T ss_pred CCcCcCCCCCCcccCcHHH
Confidence 3578999999999987433
No 249
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.23 E-value=67 Score=21.55 Aligned_cols=10 Identities=20% Similarity=0.674 Sum_probs=4.7
Q ss_pred ccceeccccc
Q 037450 176 DCAICLDGIV 185 (224)
Q Consensus 176 ~C~ICle~~~ 185 (224)
.|+.|-+.+.
T Consensus 17 ~C~~C~~~I~ 26 (91)
T 2d8y_A 17 TCVECQKTVY 26 (91)
T ss_dssp BCTTTCCBCC
T ss_pred cCccCCCccC
Confidence 4455544443
No 250
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.87 E-value=16 Score=20.59 Aligned_cols=19 Identities=5% Similarity=0.120 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eq3_A 9 GEKPYECNQCGKAFSVRSS 27 (46)
T ss_dssp CCCSSEETTTTEECSSHHH
T ss_pred CCCCeECCCCChhhCCHHH
Confidence 3678999999999987433
No 251
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=23.82 E-value=15 Score=20.77 Aligned_cols=17 Identities=6% Similarity=0.165 Sum_probs=14.1
Q ss_pred ccCCCCCCCCchhhhhh
Q 037450 20 NQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~ 36 (224)
+.|+.|+.|++.|...-
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2emj_A 10 EKPFECAECGKSFSISS 26 (46)
T ss_dssp CCSEECSSSSCEESSHH
T ss_pred CCCEECCCCCcccCCHH
Confidence 57899999999998743
No 252
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.80 E-value=15 Score=20.81 Aligned_cols=18 Identities=6% Similarity=0.122 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2ytp_A 9 GERHYECSECGKAFARKS 26 (46)
T ss_dssp CCCCEECSSSCCEESSHH
T ss_pred CCCCeECCcCCcccCCHH
Confidence 367899999999998743
No 253
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=23.78 E-value=16 Score=21.33 Aligned_cols=17 Identities=6% Similarity=0.057 Sum_probs=13.9
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|.+.
T Consensus 4 ~~kp~~C~~C~k~F~~~ 20 (48)
T 3iuf_A 4 RDKPYACDICGKRYKNR 20 (48)
T ss_dssp TTSCEECTTTCCEESSH
T ss_pred CCcCEECCCcCcccCCH
Confidence 35788999999999873
No 254
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.41 E-value=16 Score=20.68 Aligned_cols=17 Identities=6% Similarity=0.149 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 9 GEKPFQCKECGMNFSWS 25 (46)
T ss_dssp CCCSEECSSSCCEESSS
T ss_pred CCCCeeCcccChhhCCH
Confidence 36789999999999874
No 255
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.40 E-value=16 Score=20.70 Aligned_cols=17 Identities=12% Similarity=0.276 Sum_probs=14.2
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 9 ~~~~~~C~~C~k~F~~~ 25 (46)
T 2emi_A 9 GERHYECSECGKAFIQK 25 (46)
T ss_dssp SCCCEECSSSCCEESSH
T ss_pred CCCCCCCCCCCcccCCH
Confidence 46789999999999874
No 256
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.35 E-value=51 Score=20.82 Aligned_cols=12 Identities=17% Similarity=0.387 Sum_probs=5.9
Q ss_pred Cccccceecccc
Q 037450 173 SEKDCAICLDGI 184 (224)
Q Consensus 173 ~~~~C~ICle~~ 184 (224)
+-..|..|...+
T Consensus 30 ~CF~C~~C~~~L 41 (70)
T 2d8z_A 30 ECFVCTACRKQL 41 (70)
T ss_dssp TTSBCSSSCCBC
T ss_pred CCCccCCCCCcC
Confidence 344555555544
No 257
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.31 E-value=16 Score=20.72 Aligned_cols=18 Identities=6% Similarity=0.104 Sum_probs=14.4
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQNI 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCCCEECCcCCchhCCHH
Confidence 357899999999998743
No 258
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=23.00 E-value=6.7 Score=26.77 Aligned_cols=20 Identities=25% Similarity=0.758 Sum_probs=16.1
Q ss_pred CCCCcccHHHHHHHHhcCCCCC
Q 037450 194 PCDHVFHKRCIDFWLEKSRSCP 215 (224)
Q Consensus 194 pC~H~FH~~CI~~Wl~~~~~CP 215 (224)
.|+|.||..|-..|-. .+|.
T Consensus 55 ~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 55 GCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp CCSCCEETTTTEECCS--SCSS
T ss_pred CCCCeeccccCccccC--Cccc
Confidence 5899999999998855 5554
No 259
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.82 E-value=16 Score=20.36 Aligned_cols=16 Identities=6% Similarity=0.117 Sum_probs=13.6
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.|+.|+.|++.|...
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSK 23 (44)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CcCccCCCCCcccCCH
Confidence 5688999999999874
No 260
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.77 E-value=17 Score=20.49 Aligned_cols=18 Identities=6% Similarity=0.037 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2eow_A 9 GEKPYKCNECGKAFRARS 26 (46)
T ss_dssp CCCCEECTTSCCEESSHH
T ss_pred CCCCeeccccCChhcCHH
Confidence 357889999999998743
No 261
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.58 E-value=17 Score=20.63 Aligned_cols=18 Identities=6% Similarity=0.102 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2yto_A 9 GEKPYKCSDCGKAFTRKS 26 (46)
T ss_dssp SCCCEECSSSCCEESSHH
T ss_pred CCCCEECcccCCccCCHh
Confidence 367899999999998743
No 262
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.49 E-value=17 Score=20.48 Aligned_cols=19 Identities=11% Similarity=0.076 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2yts_A 9 GEKPYICNECGKSFIQKSH 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCcCEECCCCChhhCChHH
Confidence 3578999999999987443
No 263
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.45 E-value=17 Score=20.48 Aligned_cols=18 Identities=11% Similarity=0.156 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ytf_A 9 GEKPFECSECQKAFNTKS 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCCCcCCCCCCcccCCHH
Confidence 357899999999998743
No 264
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.21 E-value=17 Score=20.50 Aligned_cols=17 Identities=6% Similarity=-0.001 Sum_probs=14.1
Q ss_pred ccCCCCCCCCchhhhhh
Q 037450 20 NQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~ 36 (224)
+.++.|+.|++.|...-
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQNS 26 (46)
T ss_dssp SCSEECSSSCCEESSHH
T ss_pred CCCEeCCcCCCccCCHH
Confidence 57889999999998743
No 265
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.21 E-value=18 Score=20.42 Aligned_cols=18 Identities=6% Similarity=-0.088 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRS 26 (46)
T ss_dssp CCCSEECTTTCCEESSHH
T ss_pred CCCCcCCCCCCchhCCHH
Confidence 357899999999998743
No 266
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=22.07 E-value=17 Score=20.42 Aligned_cols=18 Identities=6% Similarity=0.150 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|+.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWAS 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCcCeECCccccccCChH
Confidence 357899999999998743
No 267
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=22.04 E-value=8.8 Score=24.55 Aligned_cols=16 Identities=31% Similarity=0.546 Sum_probs=11.2
Q ss_pred HHHhcCCCCCCcccCC
Q 037450 206 FWLEKSRSCPLCRNDL 221 (224)
Q Consensus 206 ~Wl~~~~~CP~CR~~l 221 (224)
+|+..-..||.|+.++
T Consensus 5 ~~lL~iL~CP~c~~~L 20 (56)
T 2kpi_A 5 AGLLEILACPACHAPL 20 (56)
T ss_dssp CSCTTSCCCSSSCSCE
T ss_pred HHHHhheeCCCCCCcc
Confidence 4555556799998865
No 268
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=21.99 E-value=18 Score=21.46 Aligned_cols=17 Identities=12% Similarity=-0.166 Sum_probs=14.3
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 21 ~~k~~~C~~C~k~f~~~ 37 (54)
T 1yui_A 21 SEQPATCPICYAVIRQS 37 (54)
T ss_dssp SSCCEECTTTCCEESSH
T ss_pred CCCCccCCCCCcccCCH
Confidence 46789999999999873
No 269
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=21.94 E-value=18 Score=22.85 Aligned_cols=16 Identities=0% Similarity=-0.245 Sum_probs=11.2
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
|.|..|+.|+++|...
T Consensus 2 EKpy~C~~C~k~F~~~ 17 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDA 17 (60)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCccCCCCCCEeCCH
Confidence 4567777777777663
No 270
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.89 E-value=18 Score=20.45 Aligned_cols=18 Identities=6% Similarity=0.098 Sum_probs=14.6
Q ss_pred ccCCCCCCCCchhhhhhc
Q 037450 20 NQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~ 37 (224)
+.++.|+.|++.|...-.
T Consensus 10 ~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ytj_A 10 EKPYICAECGKAFTIRSN 27 (46)
T ss_dssp CCSEECSSSCCEESSHHH
T ss_pred CcCeECCCCChhhCCHHH
Confidence 578999999999987433
No 271
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.87 E-value=18 Score=20.05 Aligned_cols=18 Identities=11% Similarity=0.141 Sum_probs=14.4
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (44)
T 2eof_A 9 GEKPYECNECQKAFNTKS 26 (44)
T ss_dssp CCCSEECTTTCCEESCHH
T ss_pred CCCCeECCCCCcccCCHh
Confidence 356889999999998743
No 272
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.87 E-value=17 Score=20.41 Aligned_cols=19 Identities=5% Similarity=0.053 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-.
T Consensus 9 ~~~~~~C~~C~k~f~~~~~ 27 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQKAN 27 (46)
T ss_dssp CCCCEECSSSCCEESSHHH
T ss_pred CCCCeECCCCCCccCCHHH
Confidence 3678999999999987433
No 273
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.86 E-value=18 Score=20.45 Aligned_cols=19 Identities=5% Similarity=0.099 Sum_probs=15.1
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-.
T Consensus 9 ~~~~~~C~~C~k~F~~~~~ 27 (46)
T 2em3_A 9 GEKPYECKVCSKAFTQKAH 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCcCeECCCCCcccCCHHH
Confidence 4678999999999987433
No 274
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.69 E-value=19 Score=20.28 Aligned_cols=17 Identities=12% Similarity=0.278 Sum_probs=14.0
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.+..|+.|++.|...
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2eor_A 9 GEKPYNCEECGKAFIHD 25 (46)
T ss_dssp CCCSEECTTTCCEESSH
T ss_pred CCcCccCCCCCCCcCCH
Confidence 35789999999999873
No 275
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.43 E-value=19 Score=20.23 Aligned_cols=17 Identities=6% Similarity=0.063 Sum_probs=14.1
Q ss_pred ccCCCCCCCCchhhhhh
Q 037450 20 NQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~ 36 (224)
+.|..|+.|++.|...-
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2en8_A 10 EKSHTCDECGKNFCYIS 26 (46)
T ss_dssp CSSEECTTTCCEESSHH
T ss_pred CCCeECCCcCcccCCHH
Confidence 57889999999998743
No 276
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.39 E-value=44 Score=22.51 Aligned_cols=39 Identities=23% Similarity=0.521 Sum_probs=22.2
Q ss_pred CccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 173 SEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 173 ~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
....|+.|-+.+. ++.+ ..-+..||.+|. .|-.|+..|.
T Consensus 24 ~~~~C~~C~~~I~-~~~v--~a~~~~~H~~CF--------~C~~C~~~L~ 62 (90)
T 2dar_A 24 RTPMCAHCNQVIR-GPFL--VALGKSWHPEEF--------NCAHCKNTMA 62 (90)
T ss_dssp CCCBBSSSCCBCC-SCEE--EETTEEECTTTC--------BCSSSCCBCS
T ss_pred CCCCCccCCCEec-ceEE--EECCccccccCC--------ccCCCCCCCC
Confidence 3456777777763 3322 234667776653 4666666553
No 277
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=21.34 E-value=11 Score=24.41 Aligned_cols=38 Identities=24% Similarity=0.522 Sum_probs=25.4
Q ss_pred ccccceeccccccCC---eeEEcC--CCCcccHHHHHHHHhcC
Q 037450 174 EKDCAICLDGIVVGQ---LASCTP--CDHVFHKRCIDFWLEKS 211 (224)
Q Consensus 174 ~~~C~ICle~~~~~~---~~~~lp--C~H~FH~~CI~~Wl~~~ 211 (224)
...||-|...++-.+ .+.... |++.|+..|..+|-...
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~~~ 48 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHG 48 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGGG
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcccCC
Confidence 456888887775433 222223 88999999999987543
No 278
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.31 E-value=62 Score=21.15 Aligned_cols=25 Identities=28% Similarity=0.614 Sum_probs=12.2
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHH
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRC 203 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~C 203 (224)
.|+.|-+.+. +..+. .-+..||.+|
T Consensus 17 ~C~~C~~~I~-~~~v~--a~~~~wH~~C 41 (81)
T 1v6g_A 17 RCFSCDQFIE-GEVVS--ALGKTYHPDC 41 (81)
T ss_dssp BCTTTCCBCC-SCCEE--ETTEEECTTT
T ss_pred cCccccCEec-cceEE--ECCceeCccC
Confidence 5666666554 22222 2355566555
No 279
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.30 E-value=18 Score=20.35 Aligned_cols=17 Identities=6% Similarity=-0.001 Sum_probs=14.1
Q ss_pred ccCCCCCCCCchhhhhh
Q 037450 20 NQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~ 36 (224)
+.|..|+.|++.|...-
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEECSSSCCEESSSH
T ss_pred CCCeECCcCCchhCCHH
Confidence 67889999999998743
No 280
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=21.22 E-value=18 Score=20.37 Aligned_cols=18 Identities=6% Similarity=-0.051 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNS 26 (46)
T ss_dssp TSCCEECSSSCCEESSHH
T ss_pred CCcCcCCCCCcchhCCHH
Confidence 367899999999998743
No 281
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=21.14 E-value=28 Score=20.41 Aligned_cols=16 Identities=6% Similarity=-0.155 Sum_probs=10.6
Q ss_pred ccCCCCCCCCchhhhh
Q 037450 20 NQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~ 35 (224)
+.++.|+.|++.|...
T Consensus 2 ~~~~~C~~C~~~f~~~ 17 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSN 17 (57)
T ss_dssp ---CBCTTTCCBCSCH
T ss_pred CCCccCCCCcchhCCh
Confidence 4678889998888764
No 282
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=21.13 E-value=53 Score=20.46 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=12.1
Q ss_pred ccceeccccccCCeeEEcCCCCcccHHH
Q 037450 176 DCAICLDGIVVGQLASCTPCDHVFHKRC 203 (224)
Q Consensus 176 ~C~ICle~~~~~~~~~~lpC~H~FH~~C 203 (224)
.|+.|-+.+. ++. +..-+..||.+|
T Consensus 7 ~C~~C~~~I~-~~~--~~a~~~~~H~~C 31 (66)
T 1nyp_A 7 ICGACRRPIE-GRV--VNAMGKQWHVEH 31 (66)
T ss_dssp EETTTTEECC-SCE--ECCTTSBEETTT
T ss_pred CCcccCCEec-ceE--EEECccccccCc
Confidence 4666666554 221 223355566554
No 283
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.08 E-value=18 Score=20.44 Aligned_cols=18 Identities=6% Similarity=0.102 Sum_probs=14.6
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|+.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (46)
T 2emf_A 9 GGKHFECTECGKAFTRKS 26 (46)
T ss_dssp SSCCEECSSSCCEESCHH
T ss_pred CCCCeECCCCCchhCCHH
Confidence 467899999999998743
No 284
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.88 E-value=20 Score=20.23 Aligned_cols=19 Identities=5% Similarity=-0.054 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|..|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~ 27 (46)
T 2eq0_A 9 GEKPYKCHECGKVFRRNSH 27 (46)
T ss_dssp CCCCEECTTTCCEESSHHH
T ss_pred CCCCeECCCCCchhCCHHH
Confidence 4678999999999987433
No 285
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.87 E-value=19 Score=20.37 Aligned_cols=17 Identities=6% Similarity=0.006 Sum_probs=14.1
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|..|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRH 25 (46)
T ss_dssp CCCCEECSSSCCEESSH
T ss_pred CCCCEEccccCcccCCH
Confidence 35788999999999874
No 286
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.76 E-value=19 Score=20.27 Aligned_cols=17 Identities=6% Similarity=0.034 Sum_probs=14.0
Q ss_pred hccCCCCCCCCchhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQ 35 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~ 35 (224)
.+.|+.|+.|++.|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHN 25 (46)
T ss_dssp CSSSEECSSSCCEESSH
T ss_pred CCCCeECCCCCchhCCh
Confidence 36789999999999874
No 287
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.76 E-value=19 Score=20.33 Aligned_cols=18 Identities=6% Similarity=0.050 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2em4_A 9 GQRPYECIECGKAFKTKS 26 (46)
T ss_dssp CSSSEECSSSCCEESSHH
T ss_pred CCcCcCCCCCCCccCCHH
Confidence 357889999999998743
No 288
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=20.73 E-value=41 Score=23.21 Aligned_cols=39 Identities=21% Similarity=0.485 Sum_probs=19.5
Q ss_pred cccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCC
Q 037450 175 KDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDL 221 (224)
Q Consensus 175 ~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l 221 (224)
..|+.|..+++.... +..|..|-.. +.....||-|.++|
T Consensus 3 ~~CP~C~~~l~~~~~-------~~~C~~C~~~-~~~~afCPeCgq~L 41 (81)
T 2jrp_A 3 ITCPVCHHALERNGD-------TAHCETCAKD-FSLQALCPDCRQPL 41 (81)
T ss_dssp CCCSSSCSCCEECSS-------EEECTTTCCE-EEEEEECSSSCSCC
T ss_pred CCCCCCCCccccCCC-------ceECcccccc-CCCcccCcchhhHH
Confidence 568888877753322 1223333221 12223577777665
No 289
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.68 E-value=19 Score=20.26 Aligned_cols=18 Identities=11% Similarity=0.167 Sum_probs=14.4
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.|..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNS 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCCCcCCCCCCCcCCChH
Confidence 356889999999998743
No 290
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=20.67 E-value=13 Score=28.81 Aligned_cols=32 Identities=25% Similarity=0.764 Sum_probs=21.8
Q ss_pred CeeEEcCCCCcccHHHHHHHH-----hcCCCCCCccc
Q 037450 188 QLASCTPCDHVFHKRCIDFWL-----EKSRSCPLCRN 219 (224)
Q Consensus 188 ~~~~~lpC~H~FH~~CI~~Wl-----~~~~~CP~CR~ 219 (224)
..+..-.|...||..|+.--. ...-.||.|+.
T Consensus 22 ~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 22 FYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 445556799999999984221 12447999975
No 291
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.65 E-value=20 Score=20.11 Aligned_cols=19 Identities=5% Similarity=-0.008 Sum_probs=15.0
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~ 27 (46)
T 2eoe_A 9 GEKPYKCNECGKVFTQNSH 27 (46)
T ss_dssp CCCSSEETTTTEECSSHHH
T ss_pred CCCCeECCCcChhhCCHHH
Confidence 3678999999999987443
No 292
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.58 E-value=19 Score=20.25 Aligned_cols=19 Identities=5% Similarity=0.097 Sum_probs=14.9
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|+.|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQS 27 (46)
T ss_dssp SCCSEECSSSCCEESSHHH
T ss_pred CCCCeeCCCcCCccCCHHH
Confidence 3678999999999987433
No 293
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=20.48 E-value=69 Score=21.42 Aligned_cols=40 Identities=28% Similarity=0.473 Sum_probs=26.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCC
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLP 222 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~ 222 (224)
.....|+.|-+.+.. . + +..-+..||.+| ..|-.|+..|.
T Consensus 23 ~~~~~C~~C~~~I~~-~-~-~~a~~~~~H~~C--------F~C~~C~~~L~ 62 (89)
T 1x64_A 23 QRMPLCDKCGSGIVG-A-V-VKARDKYRHPEC--------FVCADCNLNLK 62 (89)
T ss_dssp CSCCBCTTTCCBCCS-C-C-EESSSCEECTTT--------CCCSSSCCCTT
T ss_pred CcCCCcccCCCEecc-c-E-EEECCceECccC--------CEecCCCCCCC
Confidence 345678999887753 2 2 233567888877 35777777664
No 294
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.48 E-value=16 Score=20.62 Aligned_cols=18 Identities=6% Similarity=0.045 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.+..|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~F~~~~ 26 (45)
T 2epu_A 9 GQKPFECTHCGKSFRAKG 26 (45)
T ss_dssp SCCSEEETTTTEEESSHH
T ss_pred CCcCccCCCCCCccCChH
Confidence 357889999999998743
No 295
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=20.43 E-value=54 Score=23.55 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=21.1
Q ss_pred cCccccceeccccccCCeeEEcCCCCcccHHHHHHHHh
Q 037450 172 ESEKDCAICLDGIVVGQLASCTPCDHVFHKRCIDFWLE 209 (224)
Q Consensus 172 ~~~~~C~ICle~~~~~~~~~~lpC~H~FH~~CI~~Wl~ 209 (224)
..-..|..|...+..++... ..=+..||..|....+.
T Consensus 34 ~~CF~C~~C~~~L~~g~~f~-~~~g~~yC~~cy~~~~~ 70 (123)
T 2l3k_A 34 LECFKCAACQKHFSVGDRYL-LINSDIVCEQDIYEWTK 70 (123)
T ss_dssp TTTCBCTTTCCBCCTTCEEE-ECSSSEEEGGGHHHHHH
T ss_pred cccCccccCCCCCCCCCcEE-eeCCEEEcHHHhHHHhc
Confidence 45566777776664444332 22466677777666543
No 296
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.42 E-value=16 Score=20.72 Aligned_cols=19 Identities=5% Similarity=0.156 Sum_probs=14.9
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.|+.|+.|++.|...-.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2eoz_A 9 GEKPYSCNVCGKAFVLSAH 27 (46)
T ss_dssp SCCSEEETTTTEEESSHHH
T ss_pred CCCCeECcccChhhCCHHH
Confidence 3578999999999987433
No 297
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.31 E-value=20 Score=20.20 Aligned_cols=19 Identities=5% Similarity=0.071 Sum_probs=14.8
Q ss_pred hccCCCCCCCCchhhhhhc
Q 037450 19 RNQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~ 37 (224)
.+.++.|+.|++.|...-+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ep2_A 9 GEKPYECSICGKSFTKKSQ 27 (46)
T ss_dssp CCCSEECSSSCCEESSHHH
T ss_pred CCcCcCCCCCCcccCCHHH
Confidence 3678999999999987433
No 298
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.13 E-value=20 Score=20.18 Aligned_cols=18 Identities=6% Similarity=0.037 Sum_probs=14.5
Q ss_pred hccCCCCCCCCchhhhhh
Q 037450 19 RNQLWDLPNMQPGFIFQL 36 (224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~ 36 (224)
.+.++.|+.|++.|...-
T Consensus 9 ~~k~~~C~~C~k~f~~~~ 26 (46)
T 2ep3_A 9 GEKPYRCAECGKAFTDRS 26 (46)
T ss_dssp CCCSEECSSSCCEESSHH
T ss_pred CCCCeECCCCCchhCCHH
Confidence 357899999999998743
No 299
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=20.06 E-value=20 Score=20.08 Aligned_cols=18 Identities=6% Similarity=0.115 Sum_probs=14.6
Q ss_pred ccCCCCCCCCchhhhhhc
Q 037450 20 NQLWDLPNMQPGFIFQLR 37 (224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~ 37 (224)
+.|..|+.|++.|...-+
T Consensus 10 ~k~~~C~~C~k~f~~~~~ 27 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLKSQ 27 (46)
T ss_dssp CCSEECSSSSCEESSHHH
T ss_pred CCceECCCCCchhCCHHH
Confidence 578899999999987443
No 300
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=20.04 E-value=88 Score=22.31 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=33.6
Q ss_pred cCccccceecccccc-CCeeEEcCCCCcccHHHHHHHHhcCCCCCCcccCCCC
Q 037450 172 ESEKDCAICLDGIVV-GQLASCTPCDHVFHKRCIDFWLEKSRSCPLCRNDLPA 223 (224)
Q Consensus 172 ~~~~~C~ICle~~~~-~~~~~~lpC~H~FH~~CI~~Wl~~~~~CP~CR~~l~~ 223 (224)
.+-..|..|...+.. +... ...=+..||..|...-+..+..|-.|...|..
T Consensus 30 ~~CF~C~~C~~~L~~~~~~~-~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 30 SRCLKCSSCQAQLGDIGTSS-YTKSGMILCRNDYIRLFGNSGAGGSGGHMGSG 81 (122)
T ss_dssp HHHHCCSSSCCCTTTSEECC-EEETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred hhCCCcCCCCCcccccCCeE-EEECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence 455678888887742 1222 23356778899888766554589999888753
Done!