BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037451
PPINHQSPAPETEPLDIKRPRKPPVLHHPRPRQTNILIWCCATLCLIFSLILIFFGIATL
IIFLVIRPRTPVFDTPNANLSTIYFDSPEYFNGDFTFLANFSNPNRKIGARFEFLEIELL
FFNRLISTQIVQPFSQQPREQRLESVHMISSLVFMPQDHAVELRKQVQNNRINYNIRASF
KVKATLGVIHFSYWLHSRCQLEMTGPPTGVLVAHRCQTKR

High Scoring Gene Products

Symbol, full name Information P value
AT4G26490 protein from Arabidopsis thaliana 2.9e-60
AT5G56050 protein from Arabidopsis thaliana 3.2e-49
AT1G13050 protein from Arabidopsis thaliana 2.9e-29
AT5G56070 protein from Arabidopsis thaliana 7.6e-09
AT1G08160 protein from Arabidopsis thaliana 9.3e-08
AT3G52470 protein from Arabidopsis thaliana 0.00014
AT5G45320 protein from Arabidopsis thaliana 0.00051

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037451
        (220 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131478 - symbol:AT4G26490 "AT4G26490" species...   600  2.9e-60   2
TAIR|locus:2161835 - symbol:AT5G56050 "AT5G56050" species...   513  3.2e-49   1
TAIR|locus:2031840 - symbol:AT1G13050 "AT1G13050" species...   291  2.9e-29   2
TAIR|locus:2161755 - symbol:AT5G56070 "AT5G56070" species...   132  7.6e-09   1
TAIR|locus:2205180 - symbol:AT1G08160 "AT1G08160" species...   134  9.3e-08   1
TAIR|locus:2079879 - symbol:AT3G52470 species:3702 "Arabi...   110  0.00014   1
TAIR|locus:2158465 - symbol:AT5G45320 "AT5G45320" species...   105  0.00051   1


>TAIR|locus:2131478 [details] [associations]
            symbol:AT4G26490 "AT4G26490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 EMBL:CP002687 Pfam:PF03168
            EMBL:AK221464 IPI:IPI00544429 RefSeq:NP_194379.3 UniGene:At.32176
            UniGene:At.68057 ProteinModelPortal:Q56Y59
            EnsemblPlants:AT4G26490.1 GeneID:828755 KEGG:ath:AT4G26490
            TAIR:At4g26490 HOGENOM:HOG000070793 InParanoid:Q56Y59 OMA:NANLHTI
            PhylomeDB:Q56Y59 ProtClustDB:CLSN2916669 Genevestigator:Q56Y59
            Uniprot:Q56Y59
        Length = 268

 Score = 600 (216.3 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
 Identities = 114/207 (55%), Positives = 144/207 (69%)

Query:    15 LDIKRPRKPPV-LHHPRPRQTNILIWCCATLCXXXXXXXXXXGIATLIIFLVIRPRTPVF 73
             LD + PRK  V L  PR  +T++ IWC A  C           IATLI+FL IRPR PVF
Sbjct:    63 LDAE-PRKDRVILRQPRSSRTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIRPRIPVF 121

Query:    74 DTPNANLSTIYFDSPEYFNGDFTFLANFSNPNRKIGARXXXXXXXXXXXNRLISTQIVQP 133
             D PNANL TIYFD+PE+FNGD + L NF+NPN+KI  +           NRLI+ Q+VQP
Sbjct:   122 DIPNANLHTIYFDTPEFFNGDLSMLVNFTNPNKKIEVKFEKLRIELFFFNRLIAAQVVQP 181

Query:   134 FSQQPREQRLESVHMISSLVFMPQDHAVELRKQVQNNRINYNIRASFKVKATLGVIHFSY 193
             F Q+  E RLE + +ISSLV +P +HAVELR+Q++NN+I Y IR +FKVKA  G+IH+SY
Sbjct:   182 FLQKKHETRLEPIRLISSLVGLPVNHAVELRRQLENNKIEYEIRGTFKVKAHFGMIHYSY 241

Query:   194 WLHSRCQLEMTGPPTGVLVAHRCQTKR 220
              LH RCQL+MTGPPTG+L++  C TK+
Sbjct:   242 QLHGRCQLQMTGPPTGILISRNCTTKK 268

 Score = 35 (17.4 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query:     1 PPINHQSPAPETEPLDIKRPRKPP-VLHHPR 30
             P + H  P P+ +P +      P  V + PR
Sbjct:     2 PNLPHLPPPPQLQPPETPSWETPSSVWYTPR 32


>TAIR|locus:2161835 [details] [associations]
            symbol:AT5G56050 "AT5G56050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 EMBL:AB011476 ProtClustDB:CLSN2916669
            EMBL:AY773906 IPI:IPI00537635 RefSeq:NP_200416.1 UniGene:At.50914
            ProteinModelPortal:Q9FKU2 EnsemblPlants:AT5G56050.1 GeneID:835703
            KEGG:ath:AT5G56050 TAIR:At5g56050 InParanoid:Q9FKU2 OMA:NTILFES
            PhylomeDB:Q9FKU2 Genevestigator:Q9FKU2 Uniprot:Q9FKU2
        Length = 283

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 103/221 (46%), Positives = 139/221 (62%)

Query:     1 PPINHQSPA-PETEPLDIKRPRKPPVLHHPRPRQTNILIWCCATLCXXXXXXXXXXGIAT 59
             P  N +SPA P+ + ++     +  VL   R  +TN  IWC A LC          GIAT
Sbjct:    62 PLSNQKSPATPKLDSMEAHPLHETMVLLQLRTSRTNPWIWCGAALCFIFSILLIVFGIAT 121

Query:    60 LIIFLVIRPRTPVFDTPNANLSTIYFDSPEYFNGDFTFLANFSNPNRKIGARXXXXXXXX 119
             LI++L ++PRTPVFD  NA L+TI F+SP YFNGD     NF+NPN+K+  R        
Sbjct:   122 LILYLAVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNPNKKLNVRFENLMVEL 181

Query:   120 XXXNRLISTQIVQPFSQQPREQRLESVHMISSLVFMPQDHAVELRKQVQNNRINYNIRAS 179
                +  I+TQ V PFSQ+  + RLE + +IS+LVF+P +H +ELR+QV +NRI Y IR++
Sbjct:   182 WFADTKIATQGVLPFSQRNGKTRLEPIRLISNLVFLPVNHILELRRQVTSNRIAYEIRSN 241

Query:   180 FKVKATLGVIHFSYWLHSRCQLEMTGPPTGVLVAHRCQTKR 220
             F+VKA  G+IH+SY LH  CQL+++ PP G LV   C TKR
Sbjct:   242 FRVKAIFGMIHYSYMLHGICQLQLSSPPAGGLVYRNCTTKR 282


>TAIR|locus:2031840 [details] [associations]
            symbol:AT1G13050 "AT1G13050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0006312 "mitotic recombination" evidence=RCA] [GO:0009410
            "response to xenobiotic stimulus" evidence=RCA] [GO:0009560 "embryo
            sac egg cell differentiation" evidence=RCA] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
            germination" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0009933 "meristem structural
            organization" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0016567 "protein
            ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
            evidence=RCA] [GO:0048522 "positive regulation of cellular process"
            evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007357
            IPI:IPI00535640 PIR:E86264 RefSeq:NP_172764.1 UniGene:At.49880
            UniGene:At.71978 ProteinModelPortal:Q9SAE0
            EnsemblPlants:AT1G13050.1 GeneID:837862 KEGG:ath:AT1G13050
            TAIR:At1g13050 HOGENOM:HOG000090867 InParanoid:Q9SAE0 OMA:PATICCA
            PhylomeDB:Q9SAE0 ProtClustDB:CLSN2682488 Genevestigator:Q9SAE0
            Uniprot:Q9SAE0
        Length = 317

 Score = 291 (107.5 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
 Identities = 62/211 (29%), Positives = 103/211 (48%)

Query:    12 TEPLDIKR-PRKPPVLHHPRPRQTNILIWCCATLCXXXXXXXXXXGIATLIIFLVIRPRT 70
             +EP   +R P +P   +   P++T  +       C          G+  L+++L  RPR+
Sbjct:   109 SEPTPWRRAPTRPA--YQQGPKRTKPMTLPATICCAILLIVLILSGLILLLVYLANRPRS 166

Query:    71 PVFDTPNANLSTIYFDSPEYFNGDFTFLANFSNPNRKIGARXXXXXXXXXXXNRLISTQI 130
             P FD   A L+T   D     NGD   + NF+NP++K               N LI+T+ 
Sbjct:   167 PYFDISAATLNTANLDMGYVLNGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEH 226

Query:   131 VQPFSQQPREQRLESVHMISSLVFMPQDHAVELRKQVQNNRINYNIRASFKVKATLG-VI 189
             ++PF          S H++SS V +    + +L+ Q+    +  N+R +F  ++ LG ++
Sbjct:   227 IEPFIVPKGMSMFTSFHLVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLM 286

Query:   190 HFSYWLHSRCQLEMTGPPTGVLVAHRCQTKR 220
              +SYWLH++C + +  PP G + A RC TKR
Sbjct:   287 RYSYWLHTQCSISLNTPPAGTMRARRCNTKR 317

 Score = 49 (22.3 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query:     1 PPINHQSPAPETEPLDIKRPRKP-PVLHHP---RPRQ 33
             P   H+SP+    PL   RP +P P  H+P   RP Q
Sbjct:    61 PETIHESPSSRPLPL---RPEEPLPPRHNPNSARPLQ 94


>TAIR|locus:2161755 [details] [associations]
            symbol:AT5G56070 "AT5G56070" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB011476
            IPI:IPI00523687 RefSeq:NP_200418.1 UniGene:At.55575
            EnsemblPlants:AT5G56070.1 GeneID:835705 KEGG:ath:AT5G56070
            TAIR:At5g56070 PhylomeDB:Q9FKU0 Genevestigator:Q9FKU0
            Uniprot:Q9FKU0
        Length = 119

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 23/54 (42%), Positives = 36/54 (66%)

Query:   162 ELRKQVQNNRINYNIRASFKVKATLGVIHFSYWLHSRCQLEMTGPPTGVLVAHR 215
             E ++QV +N I Y I + F+VK  +G I++SYWL   CQL++T PP   L++ +
Sbjct:    45 ENQRQVTSNMIEYEIISRFRVKVVIGYINYSYWLKGSCQLQLTSPPADDLLSRK 98


>TAIR|locus:2205180 [details] [associations]
            symbol:AT1G08160 "AT1G08160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR004864 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC011438 EMBL:AC026875 PIR:A86216
            Pfam:PF03168 EMBL:AY065386 EMBL:AY091277 IPI:IPI00536079
            RefSeq:NP_849612.1 UniGene:At.47247 ProteinModelPortal:Q8VZ13
            PaxDb:Q8VZ13 PRIDE:Q8VZ13 EnsemblPlants:AT1G08160.1 GeneID:837337
            KEGG:ath:AT1G08160 TAIR:At1g08160 eggNOG:NOG295834
            HOGENOM:HOG000150654 InParanoid:Q8VZ13 OMA:MRISTAH PhylomeDB:Q8VZ13
            ProtClustDB:CLSN2686090 Genevestigator:Q8VZ13 Uniprot:Q8VZ13
        Length = 221

 Score = 134 (52.2 bits), Expect = 9.3e-08, P = 9.3e-08
 Identities = 43/188 (22%), Positives = 85/188 (45%)

Query:     1 PPINHQSPAPETEPLDIKRPRKPPVLHHPRP-RQTNILIWCCATLCXXXXXXXXXXGIAT 59
             PP     PA  T+P    +P+  P    P P R+ N ++  C  +           G+A 
Sbjct:     3 PPNPAHQPARRTQPQ--LQPQSQPRAQ-PLPGRRMNPVL--C--IIVALVLLGLLVGLAI 55

Query:    60 LIIFLVIRPRTPVFDTPNANLSTIYF-DSPEYFNGDFTFLANFSNPNRKIGARXXXXXXX 118
             LI +L +RP+  ++    A++      ++ ++ N  F+++    NP + +  R       
Sbjct:    56 LITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIS 115

Query:   119 XXXXNRLISTQIVQPFSQQPR-EQRLESVHMISSLVFMPQDHAVELRKQVQNNRINYNI- 176
                 N+ ++ + + PF Q+P+ E R+E+  ++S  V + + +A +LR +     I   + 
Sbjct:   116 TAHHNQSVAHKNISPFKQRPKNETRIET-QLVSHNVALSKFNARDLRAEKSKGTIEMEVY 174

Query:   177 ---RASFK 181
                R S+K
Sbjct:   175 ITARVSYK 182


>TAIR|locus:2079879 [details] [associations]
            symbol:AT3G52470 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009506 "plasmodesma"
            evidence=IDA] InterPro:IPR004864 GO:GO:0009506 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AL050300 Pfam:PF03168
            HOGENOM:HOG000238706 EMBL:AY080785 EMBL:AY114041 EMBL:AY088695
            IPI:IPI00532405 PIR:T08452 RefSeq:NP_190815.1 UniGene:At.20394
            ProteinModelPortal:Q9SVC8 PaxDb:Q9SVC8 PRIDE:Q9SVC8
            EnsemblPlants:AT3G52470.1 GeneID:824412 KEGG:ath:AT3G52470
            TAIR:At3g52470 eggNOG:NOG266117 InParanoid:Q9SVC8 OMA:LRRCCGS
            PhylomeDB:Q9SVC8 ProtClustDB:CLSN2915500 ArrayExpress:Q9SVC8
            Genevestigator:Q9SVC8 Uniprot:Q9SVC8
        Length = 208

 Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
 Identities = 39/173 (22%), Positives = 68/173 (39%)

Query:    44 LCXXXXXXXXXXGIATLIIFLVIRPRTPVFDTPNANLSTIYFDSPEYFNGDFTFLANFSN 103
             LC           I   ++++++RP  P F   +A +       P     +F       N
Sbjct:    19 LCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIASRN 78

Query:   104 PNRKIGARXXXXXXXXXXXNRLISTQI-VQPFSQQPREQRLESVHMISSLVFMPQDHAVE 162
             PN KIG             N+ I+ +  + P  Q  +E  + S  +  + V +   ++V 
Sbjct:    79 PNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNSVA 138

Query:   163 LRKQVQNNRINYNIRASFKVKATLG-VIHFSYWLHSRCQ--LEMTGPPTGVLV 212
             L ++     +   IRA   V+  +  +I   Y +H RCQ  + +     GVLV
Sbjct:   139 LGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVLV 191


>TAIR|locus:2158465 [details] [associations]
            symbol:AT5G45320 "AT5G45320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] InterPro:IPR004864 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB020744 Pfam:PF03168 EMBL:AY800650
            EMBL:AY924852 IPI:IPI00529392 RefSeq:NP_199345.1 UniGene:At.51255
            ProteinModelPortal:Q9FH78 EnsemblPlants:AT5G45320.1 GeneID:834568
            KEGG:ath:AT5G45320 TAIR:At5g45320 HOGENOM:HOG000093032
            InParanoid:Q9FH78 OMA:WKVGIFA PhylomeDB:Q9FH78
            ProtClustDB:CLSN2687482 Genevestigator:Q9FH78 Uniprot:Q9FH78
        Length = 198

 Score = 105 (42.0 bits), Expect = 0.00051, P = 0.00051
 Identities = 22/77 (28%), Positives = 32/77 (41%)

Query:    34 TNILIWCCATLCXXXXXXXXXXGIATLIIFLVIRPRTPVFDTPNANLSTIYFDSPEYFNG 93
             T+  IWC A +C          GI   + +LVI PR P+    +A+L  + +D       
Sbjct:    10 TSPFIWCAAIICAIISIVVIVGGIIVFVGYLVIHPRVPIISVADAHLDFLKYDIVGVLQT 69

Query:    94 DFTFLANFSNPNRKIGA 110
               T +    N N K  A
Sbjct:    70 QLTIVIRVENDNAKAHA 86


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      220       199   0.00085  111 3  11 22  0.42    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  601 (64 KB)
  Total size of DFA:  172 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.14u 0.11s 17.25t   Elapsed:  00:00:01
  Total cpu time:  17.14u 0.11s 17.25t   Elapsed:  00:00:01
  Start:  Sat May 11 14:25:54 2013   End:  Sat May 11 14:25:55 2013

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