BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037453
(216 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553647|ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
Length = 255
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/143 (90%), Positives = 135/143 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LFKD KLSAYRDR+FPG QEEFE ALL STTVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MALLFKDPAKLSAYRDRKFPGNQEEFEHALLTSTTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDILLL 175
RGRSGGQVRDEYRTDYDPDIL L
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILFL 143
>gi|224133438|ref|XP_002328042.1| predicted protein [Populus trichocarpa]
gi|222837451|gb|EEE75830.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/171 (76%), Positives = 143/171 (83%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRFPG QEEFE+AL STTVY+GNMSFY+TEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLTKLSAYRDRRFPGNQEEFEQALQTSTTVYIGNMSFYSTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSREDTEDAVK++SGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFMSGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDILLLTLLNFMCWSDVVNISFHRTEAFNSFGGG 203
RGRSGGQVRDEYRTDYDPDILL + + +V +G G
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILLALSVRRGGYGKLVQQELEAQRQLVDYGTG 171
>gi|356549892|ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
Length = 258
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 129/143 (90%), Positives = 135/143 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LFKD K+SAYRDRRFPGTQEEFE AL+ STTVYVGNMSFYTTEEQ+YELFSR GEI
Sbjct: 1 MALLFKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSREDTEDA KYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDILLL 175
RGRSGGQVRDEYRTDYDPDILLL
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILLL 143
>gi|388501070|gb|AFK38601.1| unknown [Lotus japonicus]
Length = 253
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 126/138 (91%), Positives = 134/138 (97%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA+LFKD KLSAYRDRRFPGTQ+EFE+ALLASTTVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MATLFKDLTKLSAYRDRRFPGTQDEFEQALLASTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSREDTEDA KY+SGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYVSGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|302143335|emb|CBI21896.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/142 (88%), Positives = 134/142 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LFKD KLSAYRD+RFPGTQE+FE ALL S TVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSR+D EDAVKYISGT+LDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDILL 174
RGRSGGQVRDEYRTDYDPDILL
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILL 142
>gi|15241430|ref|NP_199233.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|145334719|ref|NP_001078705.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|75338554|sp|Q9XFD1.1|NCBP2_ARATH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=AtCBP20
gi|4768968|gb|AAD29697.1|AF140219_1 nuclear cap-binding protein [Arabidopsis thaliana]
gi|9759521|dbj|BAB10987.1| nuclear cap-binding protein; CBP20 [Arabidopsis thaliana]
gi|28466941|gb|AAO44079.1| At5g44200 [Arabidopsis thaliana]
gi|110735694|dbj|BAE99827.1| nuclear cap-binding protein [Arabidopsis thaliana]
gi|332007690|gb|AED95073.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
gi|332007691|gb|AED95074.1| nuclear cap-binding protein subunit 2 [Arabidopsis thaliana]
Length = 257
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 134/138 (97%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFK+Q KLSAYRDRRF GTQEEF+EAL ASTTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|297791443|ref|XP_002863606.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
gi|297309441|gb|EFH39865.1| cap-binding protein 20 [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 134/138 (97%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFK+Q KLSAYRDRRF GTQEEF+EAL ASTTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|223948439|gb|ACN28303.1| unknown [Zea mays]
gi|413923015|gb|AFW62947.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 141
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/141 (90%), Positives = 134/141 (95%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E ALLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDIL 173
RGRSGGQVRDEYRTDYDPDIL
Sbjct: 121 RGRSGGQVRDEYRTDYDPDIL 141
>gi|363808374|ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
gi|255647255|gb|ACU24095.1| unknown [Glycine max]
Length = 235
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/138 (91%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LFKD K+SAYRDRRFPGTQEEFE ALL STTVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MALLFKDPSKISAYRDRRFPGTQEEFEHALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSREDTED KYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLYYSREDTEDVCKYISGTILDDRPIRVDFDWGFQDGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|224092924|ref|XP_002309756.1| predicted protein [Populus trichocarpa]
gi|118488601|gb|ABK96113.1| unknown [Populus trichocarpa]
gi|222852659|gb|EEE90206.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/138 (90%), Positives = 131/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRFPG QEEFE AL +TTVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLTKLSAYRDRRFPGNQEEFEHALQTATTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSREDTEDAVK+ISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|224460055|gb|ACN43578.1| nuclear cap-binding protein [Nicotiana tabacum]
gi|261866539|gb|ACY02034.1| cap binding protein 20 [Nicotiana tabacum]
Length = 254
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 133/138 (96%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL +TTVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLKATTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKN KTPCGFCF +FYSR+DTED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNCKTPCGFCFVMFYSRDDTEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|226897447|gb|ACO90183.1| nuclear cap-binding protein 20 [Nicotiana tabacum]
Length = 171
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 133/138 (96%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL +TTVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLKATTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKN KTPCGFCF +FYSR+DTED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNCKTPCGFCFVMFYSRDDTEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|449438721|ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
gi|449476391|ref|XP_004154724.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
sativus]
Length = 251
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 126/138 (91%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLS YRDRRF G+Q+EFE AL STTVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|224460059|gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 132/138 (95%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL S TVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKNSKTPCGFCF ++YSR+D ED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|219944397|gb|ACL54980.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944399|gb|ACL54981.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460063|gb|ACN43582.1| nuclear cap-binding protein [Solanum tuberosum]
gi|262065509|gb|ACY07775.1| CBP20 protein [Solanum tuberosum]
Length = 255
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 132/138 (95%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL S TVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKNSKTPCGFCF ++YSR+D ED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|219944401|gb|ACL54982.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|219944403|gb|ACL54983.1| nuclear cap-binding protein CBP20 [Solanum tuberosum]
gi|224460057|gb|ACN43579.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 132/138 (95%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL S TVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKNSKTPCGFCF ++YSR+D ED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|46949206|gb|AAT07459.1| cap-binding protein [Mirabilis jalapa]
Length = 147
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPG QEEFEEAL STT+Y+GNMSFYTTEEQ+YELFSR GEI
Sbjct: 1 MASLFKDATKISAYRDRRFPGNQEEFEEALKKSTTLYIGNMSFYTTEEQVYELFSRVGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI MGLDKNSKTPCGFCF L+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKITMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|168472717|gb|ACA24134.1| cap-binding protein CBP20 [Lolium temulentum]
Length = 231
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLS YRDRRFPGTQEEFE ALLAS TVYVGNMSFY+TEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSVYRDRRFPGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN++TPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTRTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|226492429|ref|NP_001147247.1| LOC100280855 [Zea mays]
gi|195609038|gb|ACG26349.1| nuclear cap-binding protein subunit 2 [Zea mays]
gi|219886131|gb|ACL53440.1| unknown [Zea mays]
gi|413923017|gb|AFW62949.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 242
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 131/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E ALLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|413923016|gb|AFW62948.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 248
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/138 (89%), Positives = 131/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E ALLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|220936494|gb|ACL83596.1| CBP20 [Hordeum vulgare]
gi|326508016|dbj|BAJ86751.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 241
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/138 (90%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLS YRDRRFPGTQEEFE ALLAS TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSVYRDRRFPGTQEEFEGALLASLTVYVGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|225446445|ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Vitis vinifera]
gi|359485224|ref|XP_003633238.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Vitis vinifera]
gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 3
[Vitis vinifera]
Length = 253
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/138 (88%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LFKD KLSAYRD+RFPGTQE+FE ALL S TVY+GNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSR+D EDAVKYISGT+LDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|242065748|ref|XP_002454163.1| hypothetical protein SORBIDRAFT_04g025800 [Sorghum bicolor]
gi|241933994|gb|EES07139.1| hypothetical protein SORBIDRAFT_04g025800 [Sorghum bicolor]
Length = 242
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 130/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E LLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|357150102|ref|XP_003575342.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Brachypodium distachyon]
Length = 240
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLS YRDRRF GTQEEFE ALLAS TVYVGNMSFYTTEEQ YELF+RAGEI
Sbjct: 1 MASLFKDPSKLSVYRDRRFSGTQEEFEAALLASLTVYVGNMSFYTTEEQAYELFTRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|357150105|ref|XP_003575343.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Brachypodium distachyon]
Length = 248
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLS YRDRRF GTQEEFE ALLAS TVYVGNMSFYTTEEQ YELF+RAGEI
Sbjct: 1 MASLFKDPSKLSVYRDRRFSGTQEEFEAALLASLTVYVGNMSFYTTEEQAYELFTRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|413937758|gb|AFW72309.1| hypothetical protein ZEAMMB73_547300, partial [Zea mays]
Length = 215
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/138 (88%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E L ASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|224460061|gb|ACN43581.1| nuclear cap-binding protein [Solanum tuberosum]
Length = 255
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/138 (88%), Positives = 131/138 (94%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD K+SAYRDRRFPGTQEEFE+ALL S TVYVGNMSFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI+MGLDKNSKTP GFCF ++YSR+D ED+VKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIVMGLDKNSKTPWGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|115447265|ref|NP_001047412.1| Os02g0612300 [Oryza sativa Japonica Group]
gi|75327885|sp|Q84L14.1|NCBP2_ORYSJ RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|30692291|gb|AAP33448.1| cap-binding protein CBP20 [Oryza sativa Japonica Group]
gi|47497621|dbj|BAD19690.1| cap-binding protein CBP20 [Oryza sativa Japonica Group]
gi|113536943|dbj|BAF09326.1| Os02g0612300 [Oryza sativa Japonica Group]
gi|215715365|dbj|BAG95116.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E AL AS TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+KIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 RKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|226502054|ref|NP_001150096.1| LOC100283725 [Zea mays]
gi|195636696|gb|ACG37816.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 243
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 121/138 (87%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAY+DRRF GTQEE+E L ASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYKDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|116791485|gb|ABK25999.1| unknown [Picea sitchensis]
Length = 235
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/138 (86%), Positives = 127/138 (92%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M +LFKD +SAYRDRRF GTQEEFE AL S TVYVGN+SFYTTEEQ+YELFSRAGE+
Sbjct: 1 MTTLFKDPTLISAYRDRRFNGTQEEFEHALRTSITVYVGNLSFYTTEEQVYELFSRAGEV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KK+IMGLDKN+KTPCGFCF LFYSREDTEDAVKYISGTILDDR IRVDFDWGFQ+GRQWG
Sbjct: 61 KKLIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRSIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>gi|149393013|gb|ABR26569.1| cap-binding protein CPB20 [Lolium perenne]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/132 (89%), Positives = 123/132 (93%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
D KLS YRDRRF GTQEEFE ALLAS TVYVGNMSFY+TEEQ YELFSRAGEIKKIIMG
Sbjct: 1 DPSKLSVYRDRRFTGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEIKKIIMG 60
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
LDKN+KTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGFQ+GRQWGRGRSGG
Sbjct: 61 LDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFQEGRQWGRGRSGG 120
Query: 159 QVRDEYRTDYDP 170
QVRDEYRTDYDP
Sbjct: 121 QVRDEYRTDYDP 132
>gi|224031685|gb|ACN34918.1| unknown [Zea mays]
gi|413923018|gb|AFW62950.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 273
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 131/169 (77%), Gaps = 31/169 (18%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E ALLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFA-------------------------------LFYSREDTE 121
KKIIMGLDKNSKTPCGFCF L+YSRED E
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVLGVVHAYLWKSNGYGQGNPAAERHGRRRLPLLYYSREDAE 120
Query: 122 DAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
DAVKYISGT+LDDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP
Sbjct: 121 DAVKYISGTMLDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDP 169
>gi|302811225|ref|XP_002987302.1| hypothetical protein SELMODRAFT_125790 [Selaginella moellendorffii]
gi|300144937|gb|EFJ11617.1| hypothetical protein SELMODRAFT_125790 [Selaginella moellendorffii]
Length = 159
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 127/140 (90%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M + ++++SAY+DRRF GTQ E+EEAL S TVYVGN+SFYTTEEQ+YELFSR GEI
Sbjct: 1 MIARAAQKKEISAYKDRRFAGTQVEYEEALQTSVTVYVGNLSFYTTEEQLYELFSRCGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K+I+MGLDKN+KTPCGFCF +FY+R+D +D+VKYISGTILDDRPIRVDFDWGF+DGRQWG
Sbjct: 61 KRIVMGLDKNNKTPCGFCFIIFYTRDDAQDSVKYISGTILDDRPIRVDFDWGFEDGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDI 172
RGRSGGQVRDEYRTDYDPDI
Sbjct: 121 RGRSGGQVRDEYRTDYDPDI 140
>gi|302814995|ref|XP_002989180.1| hypothetical protein SELMODRAFT_129288 [Selaginella moellendorffii]
gi|300143080|gb|EFJ09774.1| hypothetical protein SELMODRAFT_129288 [Selaginella moellendorffii]
Length = 159
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 127/140 (90%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M + ++++SAY+DRRF GTQ E+EEAL S TVYVGN+SFYTTEEQ+YELFSR GEI
Sbjct: 1 MIARAAQKKEISAYKDRRFAGTQVEYEEALQTSVTVYVGNLSFYTTEEQLYELFSRCGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K+I+MGLDKN+KTPCGFCF +FY+R+D +D+VKYISGTILDDRPIRVDFDWGF+DGRQWG
Sbjct: 61 KRIVMGLDKNNKTPCGFCFIIFYTRDDAQDSVKYISGTILDDRPIRVDFDWGFEDGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDPDI 172
RGRSGGQVRDEYRTDYDPDI
Sbjct: 121 RGRSGGQVRDEYRTDYDPDI 140
>gi|218191155|gb|EEC73582.1| hypothetical protein OsI_08043 [Oryza sativa Indica Group]
Length = 127
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/119 (89%), Positives = 113/119 (94%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
+EE+E AL AS TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF L+
Sbjct: 6 KEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEIRKIIMGLDKNSKTPCGFCFILY 65
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIL 173
YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDPDIL
Sbjct: 66 YSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDPDIL 124
>gi|307106138|gb|EFN54385.1| hypothetical protein CHLNCDRAFT_14225, partial [Chlorella
variabilis]
Length = 148
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/138 (69%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Query: 33 MASLFKD-QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
MA L K +S Y+DRRF GTQ+EFEE L STTVYVGN+SF+TTE+QI+E+FS+ G+
Sbjct: 1 MAQLLKQLNPAISQYKDRRFCGTQQEFEECLHTSTTVYVGNLSFFTTEDQIFEVFSKVGD 60
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+I+MGLDK+ TPCGFCF ++Y+REDTED VKY++GT+LDDRPIRVDFDWGF +GRQ+
Sbjct: 61 VKRIVMGLDKHRSTPCGFCFVVYYTREDTEDCVKYVNGTMLDDRPIRVDFDWGFVEGRQF 120
Query: 152 GRGRSGGQVRDEYRTDYD 169
GRGRSGGQVRDEYR D+D
Sbjct: 121 GRGRSGGQVRDEYRMDFD 138
>gi|384248092|gb|EIE21577.1| cap-binding protein, partial [Coccomyxa subellipsoidea C-169]
Length = 145
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 117/131 (89%), Gaps = 4/131 (3%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRDRRF GTQE+FE+ L STT+YVGN+SFYTTEEQIYE+FSRAG+IK+IIMGLDKN
Sbjct: 1 ISQYRDRRFVGTQEDFEKCLRESTTLYVGNLSFYTTEEQIYEVFSRAGDIKRIIMGLDKN 60
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ--- 159
TPCGF F ++Y+RED EDAVKYISGT++DDRP+RVDFDWGF++GRQ+GRGRSGGQ
Sbjct: 61 QLTPCGFAFVVYYTREDAEDAVKYISGTVMDDRPVRVDFDWGFKEGRQFGRGRSGGQARP 120
Query: 160 -VRDEYRTDYD 169
VRDEYRTD+D
Sbjct: 121 LVRDEYRTDWD 131
>gi|195659473|gb|ACG49204.1| nuclear cap-binding protein subunit 2 [Zea mays]
gi|413923013|gb|AFW62945.1| nuclear cap-binding protein subunit 2 [Zea mays]
Length = 202
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 91/98 (92%), Positives = 95/98 (96%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
MSFYTTEEQ YELFSRAGEIKKIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+L
Sbjct: 1 MSFYTTEEQAYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDAEDAVKYISGTML 60
Query: 133 DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP
Sbjct: 61 DDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDP 98
>gi|156380921|ref|XP_001632015.1| predicted protein [Nematostella vectensis]
gi|156219065|gb|EDO39952.1| predicted protein [Nematostella vectensis]
Length = 157
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 109/128 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F GT++E E L S+T+YVGN+SFYT+E+QIYELF RAGE+KKIIMGLDK
Sbjct: 4 LSAYRDQHFRGTRQELESRLETSSTLYVGNLSFYTSEQQIYELFGRAGELKKIIMGLDKV 63
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R D E+A++YI+GT LD R IR D+D GF++GRQ+GRG++GGQVRD
Sbjct: 64 RKTPCGFCFVEYYTRPDAENAMRYINGTRLDQRIIRTDYDAGFEEGRQYGRGKTGGQVRD 123
Query: 163 EYRTDYDP 170
EYRTDYDP
Sbjct: 124 EYRTDYDP 131
>gi|303289110|ref|XP_003063843.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454911|gb|EEH52216.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 147
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 114/138 (82%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LF DQ L+ Y+DR F G+ +E+ E L STT+YVGN+SF+TTEEQI+ELF++ G +
Sbjct: 1 MARLFLDQEPLTQYKDRSFQGSMDEYLEKLRTSTTLYVGNVSFFTTEEQIWELFAKVGVL 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ I+MGLDKN+KTPCGF F +++R+D E AVKY++GT LDDR IR+DFDWGF +GRQ+G
Sbjct: 61 RMIVMGLDKNAKTPCGFSFVEYHNRKDAEKAVKYLNGTKLDDREIRIDFDWGFVEGRQFG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RG+SGGQVRDE+RTDYD
Sbjct: 121 RGKSGGQVRDEFRTDYDA 138
>gi|440792651|gb|ELR13860.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 244
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 115/138 (83%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA+L+++Q + S Y+D RF G+QE+++ L STT YVGN+SFYTTEEQIY LFS+ GEI
Sbjct: 1 MANLYREQAQQSTYKDVRFEGSQEDWDALLNKSTTFYVGNLSFYTTEEQIYALFSKCGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K+IIMGLD+ SKTPCGFCF +Y+RED E K+++GT LDDR IRVD+D GF++ RQ+G
Sbjct: 61 KRIIMGLDRVSKTPCGFCFVEYYAREDAEACYKWVNGTRLDDRTIRVDWDIGFKELRQYG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RG+SGGQVRDEYRTDYDP
Sbjct: 121 RGKSGGQVRDEYRTDYDP 138
>gi|452819639|gb|EME26694.1| nuclear cap-binding protein subunit 2 [Galdieria sulphuraria]
Length = 195
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L++D R ++ YRDRRF GTQEE+E + S T+YVGN+SFYT+EEQI+ELFS GE+
Sbjct: 1 MAYLYED-RPVTLYRDRRFQGTQEEYEHRIATSKTLYVGNLSFYTSEEQIWELFSLCGEL 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K+IIMGLD+ +TPCGFCF ++SR E A+KYISGT LDDR IR D+D+GF+ GRQ+G
Sbjct: 60 KRIIMGLDRFRRTPCGFCFVEYFSRASAELAIKYISGTKLDDRVIRADWDYGFEPGRQFG 119
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDE+R DYDP
Sbjct: 120 RGRSGGQVRDEHREDYDP 137
>gi|412985686|emb|CCO19132.1| predicted protein [Bathycoccus prasinos]
Length = 203
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 109/137 (79%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LF DQ L+ Y+DRRF G EE+ + L STT+YVGN+SF+TTEEQI+ELF+ G +
Sbjct: 1 MARLFLDQEPLTQYKDRRFEGNLEEYLDRLRTSTTLYVGNVSFFTTEEQIHELFTLCGPV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKI MGLDK TPCGF F F++R D E AVK+++GT LDDR IR+DFDWGF DGRQ+G
Sbjct: 61 KKITMGLDKQKMTPCGFTFVEFHNRRDAELAVKHLNGTKLDDREIRIDFDWGFVDGRQFG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RGRSGGQVRDEYRT++D
Sbjct: 121 RGRSGGQVRDEYRTNFD 137
>gi|159464685|ref|XP_001690572.1| hypothetical protein CHLREDRAFT_169371 [Chlamydomonas reinhardtii]
gi|158280072|gb|EDP05831.1| predicted protein [Chlamydomonas reinhardtii]
Length = 156
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 108/128 (84%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
++ YRDRRF GT+ ++E AL +STTVYVGN++F T EEQ+Y++F R G IK+I+MGLDK
Sbjct: 21 ITQYRDRRFEGTEADWEHALTSSTTVYVGNLAFTTREEQLYDVFGRVGHIKRIVMGLDKV 80
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGF FA++Y+R D E+AV +++GT++D+R IRVD DWGF +GRQ+GRGRSGGQVRD
Sbjct: 81 QKTPCGFAFAIYYTRRDAEEAVAFLNGTLVDERAIRVDLDWGFVEGRQYGRGRSGGQVRD 140
Query: 163 EYRTDYDP 170
E+R DYDP
Sbjct: 141 EFRQDYDP 148
>gi|221120107|ref|XP_002160076.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Hydra
magnipapillata]
Length = 160
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 109/128 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F GT+ + E+ L STT+YVGN+SFYT+EEQIYELFS++G+IK+IIMGLD+
Sbjct: 5 LSAYRDQHFKGTRADLEKKLETSTTLYVGNLSFYTSEEQIYELFSKSGDIKRIIMGLDRI 64
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y RE E+A++YI+GT L+DR +R D+D GF++GRQ+GRGRSGGQVRD
Sbjct: 65 KKTPCGFCFVEYYFREGAENAIRYINGTRLEDRIVRSDWDAGFEEGRQYGRGRSGGQVRD 124
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 125 EYRNDYDP 132
>gi|241116714|ref|XP_002401570.1| Cap binding protein, putative [Ixodes scapularis]
gi|259511692|sp|B7P877.1|NCBP2_IXOSC RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|215493158|gb|EEC02799.1| Cap binding protein, putative [Ixodes scapularis]
Length = 152
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 108/127 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E L STT+YVGNMSFYTTEEQIYELFS+ G++KK+IMGLD+
Sbjct: 5 LSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRF 64
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 65 HKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFVEGRQFGRGKSGGQVRD 124
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 125 EYRTDYD 131
>gi|255087756|ref|XP_002505801.1| predicted protein [Micromonas sp. RCC299]
gi|226521071|gb|ACO67059.1| predicted protein [Micromonas sp. RCC299]
Length = 146
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/138 (61%), Positives = 111/138 (80%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LF D L+ Y+DR F G+ EE+ + L +S T+YVGN+SF+T+EEQI+ LF++ G +
Sbjct: 1 MARLFLDSEPLTQYKDRLFKGSMEEYLDRLRSSATLYVGNVSFFTSEEQIWSLFAKCGVV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K +IMGLDK+ TPCGFCF +++R D E AVKY++GT LDDR +R+DFDWGFQDGRQ+G
Sbjct: 61 KTVIMGLDKHKLTPCGFCFVEYHNRVDAERAVKYLNGTKLDDREVRIDFDWGFQDGRQFG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RG+SGGQVRDEYRT+YD
Sbjct: 121 RGKSGGQVRDEYRTNYDA 138
>gi|148665345|gb|EDK97761.1| nuclear cap binding protein subunit 2, isoform CRA_b [Mus musculus]
Length = 200
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/128 (69%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYD 169
DEYR DYD
Sbjct: 136 DEYREDYD 143
>gi|442746885|gb|JAA65602.1| Putative nuclear cap-binding protein complex subunit cbp20 rrm
superfamily [Ixodes ricinus]
Length = 152
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 108/127 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E L STT+YVGNMSFYTTEEQIYELFS+ G++KK+IMGLD+
Sbjct: 5 LSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRF 64
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 65 HKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFIEGRQFGRGKSGGQVRD 124
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 125 EYRTDYD 131
>gi|449678922|ref|XP_002166119.2| PREDICTED: nuclear cap-binding protein subunit 2-like [Hydra
magnipapillata]
Length = 169
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F GT+ E E L STT+YVGN+SFYT+EEQIYELFS++G++K+IIMGLD+
Sbjct: 14 LSAYRDQHFKGTRAELERKLETSTTLYVGNLSFYTSEEQIYELFSKSGDVKRIIMGLDRV 73
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y E E+A++YI+GT L+DR +R D+D GF++GRQ+GRGRSGGQVRD
Sbjct: 74 KKTPCGFCFVEYYFSEGAENAIRYINGTRLEDRIVRSDWDAGFEEGRQYGRGRSGGQVRD 133
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 134 EYRNDYDP 141
>gi|149060737|gb|EDM11451.1| rCG52909, isoform CRA_a [Rattus norvegicus]
Length = 173
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYREDYDA 144
>gi|432118147|gb|ELK38032.1| Nuclear cap-binding protein subunit 2 [Myotis davidii]
Length = 156
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|30583899|gb|AAP36198.1| Homo sapiens nuclear cap binding protein subunit 2, 20kDa
[synthetic construct]
gi|61371311|gb|AAX43646.1| nuclear cap binding protein subunit 2 [synthetic construct]
Length = 157
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|19923387|ref|NP_031388.2| nuclear cap-binding protein subunit 2 isoform 1 [Homo sapiens]
gi|77735739|ref|NP_001029568.1| nuclear cap-binding protein subunit 2 [Bos taurus]
gi|388453641|ref|NP_001252776.1| nuclear cap-binding protein subunit 2 [Macaca mulatta]
gi|57109606|ref|XP_535779.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Canis
lupus familiaris]
gi|114591287|ref|XP_516977.2| PREDICTED: nuclear cap-binding protein subunit 2 isoform 3 [Pan
troglodytes]
gi|149731241|ref|XP_001501058.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Equus
caballus]
gi|296224920|ref|XP_002758268.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1
[Callithrix jacchus]
gi|297672879|ref|XP_002814513.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Pongo
abelii]
gi|301762732|ref|XP_002916818.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
gi|350591869|ref|XP_003358812.2| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Sus
scrofa]
gi|395839708|ref|XP_003792724.1| PREDICTED: nuclear cap-binding protein subunit 2 [Otolemur
garnettii]
gi|397469680|ref|XP_003806473.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Pan
paniscus]
gi|410970681|ref|XP_003991806.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Felis
catus]
gi|426217648|ref|XP_004003065.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Ovis
aries]
gi|441633497|ref|XP_004089763.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2
[Nomascus leucogenys]
gi|1705651|sp|P52298.1|NCBP2_HUMAN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=Cell proliferation-inducing gene 55 protein;
AltName: Full=NCBP 20 kDa subunit; Short=CBP20; AltName:
Full=NCBP-interacting protein 1; Short=NIP1
gi|93140455|sp|Q3ZBJ1.1|NCBP2_BOVIN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|24987331|pdb|1H2T|Z Chain Z, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987334|pdb|1H2U|X Chain X, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987335|pdb|1H2U|Y Chain Y, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
In Complex With A Cap Analogue M7gpppg
gi|24987337|pdb|1H2V|Z Chain Z, Structure Of The Human Nuclear Cap-Binding-Complex (Cbc)
gi|28948730|pdb|1N52|B Chain B, Cap Binding Complex
gi|28948732|pdb|1N54|B Chain B, Cap Binding Complex M7gpppg Free
gi|255917904|pdb|3FEX|B Chain B, Crystal Structure Of The Cbc-Importin Alpha Complex.
gi|255917907|pdb|3FEY|B Chain B, Crystal Structure Of The Cbc-Importin Alpha Complex.
gi|984139|emb|CAA58962.1| subunit of the dimeric cap binding complex CBC [Homo sapiens]
gi|12654825|gb|AAH01255.1| Nuclear cap binding protein subunit 2, 20kDa [Homo sapiens]
gi|30582523|gb|AAP35488.1| nuclear cap binding protein subunit 2, 20kDa [Homo sapiens]
gi|56267986|gb|AAV85455.1| cell proliferation-inducing gene 55 [Homo sapiens]
gi|60654827|gb|AAX31978.1| nuclear cap binding protein subunit 2 [synthetic construct]
gi|73586797|gb|AAI03268.1| Nuclear cap binding protein subunit 2, 20kDa [Bos taurus]
gi|119574009|gb|EAW53624.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_d [Homo
sapiens]
gi|123979600|gb|ABM81629.1| nuclear cap binding protein subunit 2, 20kDa [synthetic construct]
gi|123994423|gb|ABM84813.1| nuclear cap binding protein subunit 2, 20kDa [synthetic construct]
gi|189067583|dbj|BAG38188.1| unnamed protein product [Homo sapiens]
gi|261861032|dbj|BAI47038.1| nuclear cap binding protein subunit 2, 20kDa [synthetic construct]
gi|296491293|tpg|DAA33356.1| TPA: nuclear cap-binding protein subunit 2 [Bos taurus]
gi|355560151|gb|EHH16879.1| hypothetical protein EGK_12250 [Macaca mulatta]
gi|380783325|gb|AFE63538.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|383413327|gb|AFH29877.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|384944072|gb|AFI35641.1| nuclear cap-binding protein subunit 2 isoform 1 [Macaca mulatta]
gi|410211392|gb|JAA02915.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410211394|gb|JAA02916.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410262784|gb|JAA19358.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410302104|gb|JAA29652.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334569|gb|JAA36231.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334571|gb|JAA36232.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334573|gb|JAA36233.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334575|gb|JAA36234.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|410334577|gb|JAA36235.1| nuclear cap binding protein subunit 2, 20kDa [Pan troglodytes]
gi|440904397|gb|ELR54920.1| Nuclear cap-binding protein subunit 2 [Bos grunniens mutus]
gi|444709950|gb|ELW50945.1| Nuclear cap-binding protein subunit 2 [Tupaia chinensis]
gi|1582342|prf||2118330A cap-binding protein
Length = 156
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|291400455|ref|XP_002716573.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 1
[Oryctolagus cuniculus]
Length = 156
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 VKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|355706568|gb|AES02677.1| nuclear cap binding protein subunit 2, 20kDa [Mustela putorius
furo]
Length = 154
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|13386056|ref|NP_080830.1| nuclear cap-binding protein subunit 2 [Mus musculus]
gi|157817217|ref|NP_001102995.1| nuclear cap-binding protein subunit 2 [Rattus norvegicus]
gi|354465948|ref|XP_003495438.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cricetulus
griseus]
gi|392352130|ref|XP_003751123.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Rattus
norvegicus]
gi|46395967|sp|Q9CQ49.1|NCBP2_MOUSE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511693|sp|B1WC40.1|NCBP2_RAT RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|12843496|dbj|BAB26004.1| unnamed protein product [Mus musculus]
gi|12849552|dbj|BAB28389.1| unnamed protein product [Mus musculus]
gi|26346763|dbj|BAC37030.1| unnamed protein product [Mus musculus]
gi|74150972|dbj|BAE27620.1| unnamed protein product [Mus musculus]
gi|111599293|gb|AAI18927.1| Nuclear cap binding protein subunit 2 [Mus musculus]
gi|148665344|gb|EDK97760.1| nuclear cap binding protein subunit 2, isoform CRA_a [Mus musculus]
gi|149060738|gb|EDM11452.1| rCG52909, isoform CRA_b [Rattus norvegicus]
gi|171847096|gb|AAI61994.1| Similar to nuclear cap binding protein subunit 2 [Rattus
norvegicus]
gi|344240263|gb|EGV96366.1| Nuclear cap-binding protein subunit 2 [Cricetulus griseus]
Length = 156
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYREDYDA 144
>gi|405972529|gb|EKC37293.1| Nuclear cap-binding protein subunit 2 [Crassostrea gigas]
Length = 162
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 110/127 (86%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F G++ E E+ALL S+T+YVGN+S+YTTEEQI+ELF + G+IK+I+MGLDK
Sbjct: 15 LSAYRDQHFKGSRTEQEKALLTSSTLYVGNLSYYTTEEQIHELFGKCGDIKRIVMGLDKV 74
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RE+ E A++Y++GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 75 KKTPCGFCFVEYYTREEGEYAMRYVNGTRLDDRIIRTDWDHGFKEGRQYGRGKSGGQVRD 134
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 135 EYRTDYD 141
>gi|302830043|ref|XP_002946588.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
gi|300268334|gb|EFJ52515.1| hypothetical protein VOLCADRAFT_79141 [Volvox carteri f.
nagariensis]
Length = 284
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 108/128 (84%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
++ YRDRRF G++ ++E AL STT+YVGN++F T EEQ+Y++F R G IK+I+MGLDK
Sbjct: 8 ITQYRDRRFEGSETDWENALATSTTIYVGNLAFTTREEQLYDVFGRVGHIKRIVMGLDKI 67
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
+TPCGF FA++Y+R+D E+AV +++GT++DDR IRVD DWGF +GRQ+GRGRSGGQVRD
Sbjct: 68 QRTPCGFAFAIYYTRKDAEEAVAFLNGTLVDDRAIRVDLDWGFVEGRQYGRGRSGGQVRD 127
Query: 163 EYRTDYDP 170
E+R DYDP
Sbjct: 128 EFRQDYDP 135
>gi|344282445|ref|XP_003412984.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Loxodonta africana]
Length = 156
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRPDAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|1060899|dbj|BAA09599.1| NCBP interacting protein 1 [Homo sapiens]
Length = 156
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E++++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENSMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|443695441|gb|ELT96352.1| hypothetical protein CAPTEDRAFT_149941 [Capitella teleta]
Length = 154
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 109/128 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F G + E E+ALL STT+Y+GN+SF+T EEQI+ELFSRAG++K+IIMGLDK
Sbjct: 12 LSAYRDQHFRGNRIEQEKALLTSTTLYIGNLSFFTAEEQIHELFSRAGDVKRIIMGLDKY 71
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R D E A+++++GT LDDR +R D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 72 RKTPCGFCFVEYYTRSDAEMAMRFVNGTRLDDRIVRTDWDAGFKEGRQYGRGKSGGQVRD 131
Query: 163 EYRTDYDP 170
EYRTD+D
Sbjct: 132 EYRTDFDT 139
>gi|351694922|gb|EHA97840.1| Nuclear cap-binding protein subunit 2 [Heterocephalus glaber]
Length = 156
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A+++I+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|427786559|gb|JAA58731.1| Putative cap binding protein 20 [Rhipicephalus pulchellus]
Length = 152
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 108/127 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E L S+T+Y+GNMSFYTTEEQIYELFS+ G++KK+IMGLD+
Sbjct: 5 LSSYRDQHFKGSRAEQERLLRLSSTLYIGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRF 64
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 65 HKTPCGFCFVEYYTREDAENAMRYVNGTKLDDRIIRTDWDAGFIEGRQFGRGKSGGQVRD 124
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 125 EYRTDYD 131
>gi|346472403|gb|AEO36046.1| hypothetical protein [Amblyomma maculatum]
Length = 152
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 108/128 (84%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E L S+T+Y+GNMSFYTTEEQIYELFS+ G++KK+IMGLD+
Sbjct: 4 ELSSYRDQHFKGSRAEQERLLRCSSTLYIGNMSFYTTEEQIYELFSKCGDVKKVIMGLDR 63
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R D E+A++YI+GT LDDR IR D+D GF +GRQ+GRG+SGGQVR
Sbjct: 64 FHKTPCGFCFVEYYTRADAENAMRYINGTKLDDRIIRTDWDAGFIEGRQYGRGKSGGQVR 123
Query: 162 DEYRTDYD 169
DEYRTDYD
Sbjct: 124 DEYRTDYD 131
>gi|348582770|ref|XP_003477149.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cavia
porcellus]
Length = 156
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A+++I+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRPDAENAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|355747180|gb|EHH51794.1| hypothetical protein EGM_11239 [Macaca fascicularis]
Length = 156
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ + G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHWRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|291401398|ref|XP_002717013.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 1
[Oryctolagus cuniculus]
Length = 156
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 105/129 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYEL+S++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELYSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+G GRSGGQVR
Sbjct: 76 VKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGHGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|189237587|ref|XP_975066.2| PREDICTED: similar to Cbp20 [Tribolium castaneum]
Length = 182
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 112/137 (81%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+++ +LS+YRD+ F GT+ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I
Sbjct: 1 MSTISSPSVELSSYRDQHFKGTRAEQDRLLRLSTTLYVGNLSFYTTEEQIYELFSKCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++++MGLDK KTPCGFCF +Y+R+D E+ ++YI+GT LDDR +R D+D GF +GRQ+G
Sbjct: 61 RRVVMGLDKYKKTPCGFCFVEYYNRQDAENCLRYINGTRLDDRIVRTDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG++GGQVRDEYRTDYD
Sbjct: 121 RGKTGGQVRDEYRTDYD 137
>gi|270006915|gb|EFA03363.1| hypothetical protein TcasGA2_TC013348 [Tribolium castaneum]
Length = 161
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 112/138 (81%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+++ +LS+YRD+ F GT+ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I
Sbjct: 1 MSTISSPSVELSSYRDQHFKGTRAEQDRLLRLSTTLYVGNLSFYTTEEQIYELFSKCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++++MGLDK KTPCGFCF +Y+R+D E+ ++YI+GT LDDR +R D+D GF +GRQ+G
Sbjct: 61 RRVVMGLDKYKKTPCGFCFVEYYNRQDAENCLRYINGTRLDDRIVRTDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RG++GGQVRDEYRTDYD
Sbjct: 121 RGKTGGQVRDEYRTDYDS 138
>gi|312071976|ref|XP_003138855.1| nuclear cap binding protein subunit 2 [Loa loa]
gi|307765978|gb|EFO25212.1| nuclear cap binding protein subunit 2 [Loa loa]
Length = 160
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 105/132 (79%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
D L YRD+RF G+ E E+ LL S T+YVGN+S+YTTEEQ YELFSRAG+IK+IIMG
Sbjct: 12 DASSLGPYRDQRFKGSLREQEKLLLNSKTLYVGNLSYYTTEEQTYELFSRAGDIKRIIMG 71
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+D+ KTPCGFCF +Y RED EDA++ I+GT LDDR IR D+D GF +GRQ+GRG+ GG
Sbjct: 72 IDRFKKTPCGFCFVEYYLREDAEDAMRCINGTRLDDRIIRTDWDAGFVEGRQYGRGKHGG 131
Query: 159 QVRDEYRTDYDP 170
QVRDEYR DYDP
Sbjct: 132 QVRDEYRKDYDP 143
>gi|330803417|ref|XP_003289703.1| hypothetical protein DICPUDRAFT_154090 [Dictyostelium purpureum]
gi|325080213|gb|EGC33778.1| hypothetical protein DICPUDRAFT_154090 [Dictyostelium purpureum]
Length = 213
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 107/125 (85%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y D++ TQ+EF++A+ S+T+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+N KT
Sbjct: 12 YYDKKSGLTQDEFKKAIEKSSTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRNQKT 71
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +YS+ED D +KYI+G+ LD+R IR D+D+GF++GRQ+GRG SGGQVRDEYR
Sbjct: 72 PCGFCFVEYYSKEDAADCIKYINGSKLDERLIRCDWDYGFREGRQYGRGLSGGQVRDEYR 131
Query: 166 TDYDP 170
TDYDP
Sbjct: 132 TDYDP 136
>gi|118782613|ref|XP_312392.3| AGAP002547-PA [Anopheles gambiae str. PEST]
gi|259511484|sp|Q7QCB6.3|NCBP2_ANOGA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|116129651|gb|EAA07524.3| AGAP002547-PA [Anopheles gambiae str. PEST]
Length = 163
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 110/139 (79%)
Query: 31 SAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
S + S+ LS YRD+ F G++ E E+ L S+T+YVGN+SFYTTEEQI+ELFSR G
Sbjct: 3 SQIQSVHTPSVSLSKYRDQHFKGSRHEQEKLLRVSSTLYVGNLSFYTTEEQIHELFSRCG 62
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
++++IIMGLDK KTPCGFCF +YSR D E A++YI+GT LDDR +RVD+D GF +GRQ
Sbjct: 63 DVRRIIMGLDKFKKTPCGFCFVEYYSRLDAESAMRYINGTRLDDRIVRVDWDAGFIEGRQ 122
Query: 151 WGRGRSGGQVRDEYRTDYD 169
+GRG++GGQVRDEYR D+D
Sbjct: 123 YGRGKTGGQVRDEYRQDHD 141
>gi|260817124|ref|XP_002603437.1| hypothetical protein BRAFLDRAFT_158723 [Branchiostoma floridae]
gi|229288756|gb|EEN59448.1| hypothetical protein BRAFLDRAFT_158723 [Branchiostoma floridae]
Length = 140
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 107/130 (82%)
Query: 41 RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLD 100
++L AYRD+ + G++ + E LL STT+YVGN+SFYTTEEQIYELF + G+IK+IIMGLD
Sbjct: 4 KELGAYRDQHYKGSRTDQERRLLESTTLYVGNLSFYTTEEQIYELFGKCGDIKRIIMGLD 63
Query: 101 KNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
K +TPCGFCF +Y+R D E+ ++Y +GT LDDR IR D+D GF++GRQ+GRG+SGGQV
Sbjct: 64 KMQRTPCGFCFVEYYTRGDAENCMRYTTGTRLDDRIIRCDWDAGFKEGRQYGRGKSGGQV 123
Query: 161 RDEYRTDYDP 170
RDEYR DYDP
Sbjct: 124 RDEYRKDYDP 133
>gi|157112409|ref|XP_001657521.1| 20 Kd nuclear cap binding protein [Aedes aegypti]
gi|122106168|sp|Q177H0.1|NCBP2_AEDAE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|108878082|gb|EAT42307.1| AAEL006135-PA [Aedes aegypti]
Length = 159
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 109/137 (79%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M S+ LS YRD+ F G++ E E L ++T+Y+GN+SFYTTEEQI+ELFSR G+I
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRLTSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++I+MGLDK KTPCGFCF +Y+R+D E A++YI+GT LDDR +RVD+D GF +GRQ+G
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVEYYARDDAESAMRYINGTRLDDRIVRVDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG+SGGQVRDEYR D+D
Sbjct: 121 RGKSGGQVRDEYRQDHD 137
>gi|345489693|ref|XP_001600470.2| PREDICTED: nuclear cap-binding protein subunit 2-like [Nasonia
vitripennis]
Length = 174
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 105/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F G+Q + +E L STT+YVGN+SFYTTE+Q+YE+FS+ G+IK+IIMGLDK
Sbjct: 14 LSAYRDQYFKGSQSKQDELLKTSTTLYVGNLSFYTTEQQVYEVFSKCGDIKRIIMGLDKY 73
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +YSR D E ++YI GT LDDR IR+D+D GF DGRQ+GRG++GGQ RD
Sbjct: 74 KKTPCGFCFVEYYSRADAERCMRYIHGTRLDDRIIRIDWDAGFVDGRQYGRGQTGGQFRD 133
Query: 163 EYRTDYDP 170
EYRTD+D
Sbjct: 134 EYRTDFDS 141
>gi|66807277|ref|XP_637361.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996750|sp|Q54KR9.1|NCBP2_DICDI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|60465797|gb|EAL63873.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 234
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 106/125 (84%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y D++ TQ+EF+ A+ S+T+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+N KT
Sbjct: 12 YYDKKSGFTQDEFKHAIDKSSTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRNQKT 71
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +YS+ED D +KYI+G+ LD+R IR D+D+GF++GRQ+GRG SGGQVRDEYR
Sbjct: 72 PCGFCFVEYYSKEDAADCIKYINGSKLDERLIRCDWDYGFKEGRQYGRGLSGGQVRDEYR 131
Query: 166 TDYDP 170
TDYDP
Sbjct: 132 TDYDP 136
>gi|281200605|gb|EFA74823.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 111/138 (80%), Gaps = 2/138 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Q+ L Y D++ T EEF+ A+ STTVYVG +SFYTTEEQ+YELFS+ GEI
Sbjct: 1 MSDLYTIQQPL--YFDKKSGFTLEEFKLAIERSTTVYVGFLSFYTTEEQLYELFSKCGEI 58
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLD+ KTPCGFCF +YS+ED D +KYI+GT LD+R IR D+D+GF++GRQ+G
Sbjct: 59 KKIIMGLDRIHKTPCGFCFVEYYSKEDASDCIKYINGTKLDERLIRCDWDYGFKEGRQYG 118
Query: 153 RGRSGGQVRDEYRTDYDP 170
RG SGGQVRDEYRTDYDP
Sbjct: 119 RGVSGGQVRDEYRTDYDP 136
>gi|170572372|ref|XP_001892082.1| nuclear cap binding protein subunit 2 [Brugia malayi]
gi|158602907|gb|EDP39101.1| nuclear cap binding protein subunit 2, putative [Brugia malayi]
Length = 160
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 104/132 (78%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
D L YRD+RF G+ E E+ LL S T+YVGN+S+YTTEEQ YELFSRAG+IK+IIMG
Sbjct: 12 DASSLGPYRDQRFKGSLREQEKLLLTSKTLYVGNLSYYTTEEQTYELFSRAGDIKRIIMG 71
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+D+ K PCGFCF +Y RED EDA++ I+GT LDDR IR D+D GF +GRQ+GRG+ GG
Sbjct: 72 IDRFKKIPCGFCFVEYYLREDAEDAMRCINGTRLDDRIIRTDWDAGFVEGRQYGRGKHGG 131
Query: 159 QVRDEYRTDYDP 170
QVRDEYR DYDP
Sbjct: 132 QVRDEYRKDYDP 143
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 78/138 (56%), Positives = 104/138 (75%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+MA LF DQ L+ Y+DR F GT E + +AL AS T+YVGN+SFYT+E Q LF+R G
Sbjct: 646 SMARLFLDQEPLTQYKDRAFEGTIEAYLDALRASATLYVGNLSFYTSETQARALFARCGV 705
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+++I+ GLD+ +TPCGF F + +R E +Y++GT LDDR IRVDFDWG+++GR++
Sbjct: 706 VRRIVFGLDRERRTPCGFAFVEYETRAAAERCARYLNGTKLDDREIRVDFDWGYREGREF 765
Query: 152 GRGRSGGQVRDEYRTDYD 169
GRG+SGGQVRDEYRT YD
Sbjct: 766 GRGKSGGQVRDEYRTYYD 783
>gi|259511694|sp|C0H859.1|NCBP2_SALSA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|223646940|gb|ACN10228.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
gi|223672803|gb|ACN12583.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
Length = 155
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 31 SAMASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
S + +LF D +S YRD+ F G + E E+ L + T+YVGN+SFYTTEEQ+YELFS++
Sbjct: 3 SKLNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKS 62
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
G++K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GR
Sbjct: 63 GDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKEGR 122
Query: 150 QWGRGRSGGQVRDEYRTDYDP 170
Q+GRG+SGGQVRDEYR DYDP
Sbjct: 123 QYGRGKSGGQVRDEYRQDYDP 143
>gi|339240227|ref|XP_003376039.1| nuclear cap-binding protein subunit 2 [Trichinella spiralis]
gi|316975267|gb|EFV58716.1| nuclear cap-binding protein subunit 2 [Trichinella spiralis]
Length = 148
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
+F++ K YRD RF GT E++++ L +S+T+YVGN+SF +TE+QIY LFSRAG+I+++
Sbjct: 1 MFQNSNK-PQYRDSRFKGTDEQWQKLLKSSSTIYVGNLSFCSTEDQIYALFSRAGDIRRV 59
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
IMGLD+ +TPCGFCF +Y RED E+A+ Y++G LDDR IR D+D GF +GRQ+GRG+
Sbjct: 60 IMGLDREKRTPCGFCFVEYYVREDAENAMNYLNGARLDDRVIRTDWDPGFTEGRQYGRGK 119
Query: 156 SGGQVRDEYRTDYDPD 171
SGGQVRDE+RTDYDPD
Sbjct: 120 SGGQVRDEFRTDYDPD 135
>gi|194743814|ref|XP_001954395.1| GF16759 [Drosophila ananassae]
gi|259511300|sp|B3LYP1.1|NCBP2_DROAN RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|190627432|gb|EDV42956.1| GF16759 [Drosophila ananassae]
Length = 154
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>gi|195389827|ref|XP_002053575.1| GJ23276 [Drosophila virilis]
gi|259511298|sp|B4LZ88.1|NCB2B_DROVI RecName: Full=Nuclear cap-binding protein subunit 2B; AltName:
Full=20 kDa nuclear cap-binding protein B; AltName:
Full=NCBP 20 kDa subunit B; Short=CBP20-B
gi|194151661|gb|EDW67095.1| GJ23276 [Drosophila virilis]
Length = 154
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>gi|363737175|ref|XP_422700.3| PREDICTED: nuclear cap-binding protein subunit 2 [Gallus gallus]
Length = 159
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 104/128 (81%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS YRD+ F GT+ + E L S T+YVGN+SFYTTEEQI+ELF ++G+IKKIIMGLDK
Sbjct: 18 LSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKIIMGLDKV 77
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRD
Sbjct: 78 KKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRD 137
Query: 163 EYRTDYDP 170
EYR DYD
Sbjct: 138 EYRQDYDA 145
>gi|195055430|ref|XP_001994622.1| GH15101 [Drosophila grimshawi]
gi|259511490|sp|B4JUT1.1|NCBP2_DROGR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|193892385|gb|EDV91251.1| GH15101 [Drosophila grimshawi]
Length = 154
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>gi|170034725|ref|XP_001845223.1| nuclear cap-binding protein subunit 2 [Culex quinquefasciatus]
gi|259511394|sp|B0W939.1|NCBP2_CULQU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|167876353|gb|EDS39736.1| nuclear cap-binding protein subunit 2 [Culex quinquefasciatus]
Length = 160
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 109/137 (79%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M S+ LS YRD+ F G++ E E L S+T+Y+GN+SFYTTEEQI+ELFSR G+I
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRNSSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++I+MGLDK KTPCGFCF +Y+R D+E A++YI+GT LDDR +RVD+D GF +GRQ+G
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVEYYARIDSEYAMRYINGTRLDDRIVRVDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG++GGQVRDEYR D+D
Sbjct: 121 RGKTGGQVRDEYRQDHD 137
>gi|126338527|ref|XP_001373445.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Monodelphis
domestica]
Length = 157
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 104/129 (80%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+L YRD+ F G +++ E+ L S T+YVGN+SFYTTEEQIYELF ++G+IKKI+MGLDK
Sbjct: 16 QLGQYRDQHFRGDKKDQEKLLQKSCTLYVGNLSFYTTEEQIYELFGKSGDIKKIVMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +Y R D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 VKKTACGFCFVEYYCRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRKDYDA 144
>gi|350537317|ref|NP_001232044.1| nuclear cap-binding protein subunit 2 [Taeniopygia guttata]
gi|259511696|sp|B5G279.1|NCBP2_TAEGU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|197128892|gb|ACH45390.1| putative nuclear cap binding protein subunit 2 variant 1
[Taeniopygia guttata]
Length = 168
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Query: 22 ISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
+S LL LS + S ++S YRD+ F G+++ E++L S+T+YVGN+SFYTTEEQ
Sbjct: 1 MSGLLHTTLSGLNS--DSYCEISQYRDQHFRGSRQLQEKSLKISSTLYVGNLSFYTTEEQ 58
Query: 82 IYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
I ELFS+ G++K+I+MGLDK KTPCGFCF +Y+R D E A+++I+GT LDDR IR D+
Sbjct: 59 IQELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDW 118
Query: 142 DWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 119 DAGFKEGRQYGRGKTGGQVRDEYRTDYD 146
>gi|195444793|ref|XP_002070032.1| GK11244 [Drosophila willistoni]
gi|259511689|sp|B4NB54.1|NCBP2_DROWI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|194166117|gb|EDW81018.1| GK11244 [Drosophila willistoni]
Length = 154
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 107/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLKESCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYTRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>gi|224060489|ref|XP_002188900.1| PREDICTED: nuclear cap-binding protein subunit 2 [Taeniopygia
guttata]
Length = 157
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 105/129 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F GT+ + E L S T+YVGN+SFYTTEEQI+ELF ++G+IKK+IMGLDK
Sbjct: 17 ELSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKVIMGLDK 76
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +Y+R D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 77 VKKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 136
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 137 DEYRQDYDA 145
>gi|259511691|sp|C1BY64.1|NCBP2_ESOLU RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|225716242|gb|ACO13967.1| Nuclear cap-binding protein subunit 2 [Esox lucius]
Length = 155
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 106/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ+YELFS++G++K+II+GLDK
Sbjct: 16 VSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVYELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|112983130|ref|NP_001037598.1| nuclear cap-binding protein subunit 2 [Bombyx mori]
gi|122119432|sp|Q1HE01.1|NCBP2_BOMMO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|95115190|gb|ABF55961.1| Cbp20 [Bombyx mori]
Length = 154
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 107/125 (85%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
++S+YRD+ F G++ E E+ L AS+T+Y+GN+SFYTTEEQIYEL+SR G+I+++IMGLDK
Sbjct: 6 EISSYRDQHFKGSRSEQEKLLKASSTLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+RED E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRT 166
DEYRT
Sbjct: 126 DEYRT 130
>gi|126310731|ref|XP_001371322.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
gi|395535208|ref|XP_003769622.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Sarcophilus
harrisii]
Length = 156
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 110/143 (76%), Gaps = 2/143 (1%)
Query: 28 GELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFS 87
G LSA+ S +L YRD+ F G ++ E+ L S T+YVGN+SFYTTEEQIYELFS
Sbjct: 4 GLLSALQS--DSYVELGWYRDQHFRGKMDDQEKLLKKSCTLYVGNLSFYTTEEQIYELFS 61
Query: 88 RAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD 147
++G+IKKIIMGLDK KT CGFCF +Y R D E+A++YI+GT LDDR IR D+D GF++
Sbjct: 62 KSGDIKKIIMGLDKVKKTACGFCFVEYYCRADAENAMRYINGTRLDDRIIRTDWDAGFRE 121
Query: 148 GRQWGRGRSGGQVRDEYRTDYDP 170
GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 122 GRQYGRGRSGGQVRDEYRQDYDA 144
>gi|291242692|ref|XP_002741239.1| PREDICTED: cap binding protein 20-like [Saccoglossus kowalevskii]
Length = 172
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 112/143 (78%)
Query: 27 LGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELF 86
+ L++ L +L++YRD+ F GT E E L S+T+Y+GN+SFYTTEEQI+ELF
Sbjct: 1 MANLTSPVQLTDRMVELTSYRDQHFKGTLTEQEYRLSTSSTLYLGNLSFYTTEEQIHELF 60
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
S+ G++K+IIMGLDK KTPCGFCF +Y+R D E++++Y++G+ LDDR +R D+D GF
Sbjct: 61 SKCGDLKRIIMGLDKVKKTPCGFCFVEYYTRNDAENSMRYVNGSRLDDRIVRTDWDAGFI 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRG+SGGQVRDEYRTDYD
Sbjct: 121 EGRQYGRGKSGGQVRDEYRTDYD 143
>gi|195107363|ref|XP_001998283.1| GI23717 [Drosophila mojavensis]
gi|259511685|sp|B4KCD5.1|NCBP2_DROMO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|193914877|gb|EDW13744.1| GI23717 [Drosophila mojavensis]
Length = 154
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L S+T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSSTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>gi|197632247|gb|ACH70847.1| nuclear cap binding protein subunit 2 [Salmo salar]
Length = 155
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 111/139 (79%), Gaps = 1/139 (0%)
Query: 33 MASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ +LF D +S YRD+ F G + E E+ L + T+YVGN+SFYTTEEQ+YELFS++G+
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKSGD 64
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+
Sbjct: 65 VKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQY 124
Query: 152 GRGRSGGQVRDEYRTDYDP 170
GRG+SGGQVRDEYR DYDP
Sbjct: 125 GRGKSGGQVRDEYRQDYDP 143
>gi|240849186|ref|NP_001155469.1| nuclear cap-binding protein subunit 2-like [Acyrthosiphon pisum]
gi|239790309|dbj|BAH71724.1| ACYPI002210 [Acyrthosiphon pisum]
Length = 159
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 108/127 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S+YRD+ F G++ E ++ L +STT+Y+GN++FYTTE QIYELFS+ G+IK+I+MGLDK
Sbjct: 4 ISSYRDQHFKGSRGELDKMLRSSTTMYIGNLAFYTTEGQIYELFSKCGDIKRIVMGLDKF 63
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED E+ +++++GT LDDR IR D+D GF +GRQ+GRG++GGQVRD
Sbjct: 64 KKTPCGFCFIEYYTREDAENCMRFVNGTRLDDRIIRTDWDAGFVEGRQYGRGKTGGQVRD 123
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 124 EYRTDYD 130
>gi|357615171|gb|EHJ69508.1| nuclear cap-binding protein subunit 2 [Danaus plexippus]
Length = 151
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 106/125 (84%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
++S+YRD+ F G++ E E+ L AS+T+Y+GN+SFYTTEEQIYELFSR G+I+++IMGLDK
Sbjct: 6 EISSYRDQHFKGSRTEQEKLLRASSTLYIGNLSFYTTEEQIYELFSRCGDIRRVIMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R D ED ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFLEYYTRPDAEDCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRT 166
DEYRT
Sbjct: 126 DEYRT 130
>gi|156542829|ref|XP_001608109.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Nasonia
vitripennis]
Length = 158
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L STT+YVGN+SFYTTEEQIYELFS+ G+IK+IIMGLDK
Sbjct: 9 ELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIKRIIMGLDK 68
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 69 YKKTPCGFCFMEYYLRADAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 128
Query: 162 DEYRTDYD 169
DEYR+D+D
Sbjct: 129 DEYRSDFD 136
>gi|340712465|ref|XP_003394780.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Bombus
terrestris]
gi|350399792|ref|XP_003485640.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Bombus
impatiens]
Length = 166
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 15 ELSSYRDQHFKGSRAEQDRLLRISTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 75 YKKTPCGFCFVEYYQRADAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 134
Query: 162 DEYRTDYD 169
DEYR+D+D
Sbjct: 135 DEYRSDFD 142
>gi|194900298|ref|XP_001979694.1| GG22670 [Drosophila erecta]
gi|259511301|sp|B3P0D7.1|NCBP2_DROER RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|190651397|gb|EDV48652.1| GG22670 [Drosophila erecta]
Length = 154
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRGSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>gi|380016916|ref|XP_003692414.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Apis florea]
Length = 166
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 15 ELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 75 YKKTPCGFCFVEYYQRVDAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 134
Query: 162 DEYRTDYD 169
DEYR+D+D
Sbjct: 135 DEYRSDFD 142
>gi|395734618|ref|XP_003776446.1| PREDICTED: nuclear cap-binding protein subunit 2 [Pongo abelii]
gi|397469682|ref|XP_003806474.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Pan
paniscus]
gi|194387106|dbj|BAG59919.1| unnamed protein product [Homo sapiens]
gi|221045194|dbj|BAH14274.1| unnamed protein product [Homo sapiens]
Length = 138
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/120 (69%), Positives = 99/120 (82%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
+ G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK KT CGFC
Sbjct: 7 YAGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFC 66
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
F +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 67 FVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 126
>gi|48142250|ref|XP_397316.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Apis
mellifera]
Length = 166
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 15 ELSSYRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 75 YKKTPCGFCFVEYYQRVDAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 134
Query: 162 DEYRTDYD 169
DEYR+D+D
Sbjct: 135 DEYRSDFD 142
>gi|324533059|gb|ADY49280.1| Nuclear cap-binding protein subunit 2, partial [Ascaris suum]
Length = 185
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 104/133 (78%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
+D + S YRD+RF GT E L S+T+YVGN+S++TTEEQ+YELFSRAG I++IIM
Sbjct: 39 RDALRHSDYRDQRFKGTSREQSRLLAVSSTLYVGNLSYFTTEEQVYELFSRAGRIRRIIM 98
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
G+D+ KTPCGFCF +Y RED EDA++ I+ T LDDR IR D+D GF +GRQ+GRG+ G
Sbjct: 99 GIDRFKKTPCGFCFVEYYYREDAEDAMRCINATRLDDRIIRTDWDVGFVEGRQYGRGKHG 158
Query: 158 GQVRDEYRTDYDP 170
GQVRDEYR DYDP
Sbjct: 159 GQVRDEYRKDYDP 171
>gi|348543047|ref|XP_003458995.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Oreochromis
niloticus]
Length = 164
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 105/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ELFS++G++K+II+GLDK
Sbjct: 16 ISQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLDKI 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E A+++I+GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDWDAGFKEGRQFGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|126322009|ref|XP_001367568.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
gi|126322013|ref|XP_001367656.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Monodelphis domestica]
Length = 156
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 104/129 (80%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+L YRD++F G E+ E+ L S T+ VGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELGWYRDQQFRGKMEDQEKLLKKSCTLCVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +Y R D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 VKKTACGFCFVEYYCRADAENAMRYINGTHLDDRIIRTDWDAGFREGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>gi|327288494|ref|XP_003228961.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Anolis
carolinensis]
Length = 168
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 117/148 (79%), Gaps = 2/148 (1%)
Query: 22 ISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
+SS+L LS + S ++S YRD++F G++ ++AL +S T+YVGN+SFYTTEEQ
Sbjct: 1 MSSILSTTLSGLNS--DSYCEISCYRDQQFKGSRYLQKKALKSSCTLYVGNLSFYTTEEQ 58
Query: 82 IYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
I+ELFS+ G++K+I+MGLDK KTPCGFCF +Y+R + E A+++I GT LDDR IR D+
Sbjct: 59 IHELFSKCGDVKRIVMGLDKLKKTPCGFCFVEYYTRVEAEHAMRFIDGTRLDDRIIRTDW 118
Query: 142 DWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 119 DAGFKEGRQFGRGKTGGQVRDEYRTDYD 146
>gi|324521958|gb|ADY47964.1| Nuclear cap-binding protein subunit 2 [Ascaris suum]
Length = 157
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 104/133 (78%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
+D + S YRD+RF GT E L S+T+YVGN+S++TTEEQ+YELFSRAG I++IIM
Sbjct: 11 RDALRHSDYRDQRFKGTSREQSRLLAVSSTLYVGNLSYFTTEEQVYELFSRAGRIRRIIM 70
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
G+D+ KTPCGFCF +Y RED EDA++ I+ T LDDR IR D+D GF +GRQ+GRG+ G
Sbjct: 71 GIDRFKKTPCGFCFVEYYYREDAEDAMRCINATRLDDRIIRTDWDVGFVEGRQYGRGKHG 130
Query: 158 GQVRDEYRTDYDP 170
GQVRDEYR DYDP
Sbjct: 131 GQVRDEYRKDYDP 143
>gi|17738031|ref|NP_524396.1| cap binding protein 20 [Drosophila melanogaster]
gi|195348959|ref|XP_002041014.1| GM15280 [Drosophila sechellia]
gi|195570001|ref|XP_002102997.1| GD19204 [Drosophila simulans]
gi|75026230|sp|Q9V3L6.1|NCBP2_DROME RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511687|sp|B4IBA4.1|NCBP2_DROSE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511688|sp|B4QV17.1|NCBP2_DROSI RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|5763573|emb|CAB53185.1| cap binding protein 20 [Drosophila melanogaster]
gi|7300337|gb|AAF55496.1| cap binding protein 20 [Drosophila melanogaster]
gi|17944312|gb|AAL48049.1| RE12122p [Drosophila melanogaster]
gi|194122619|gb|EDW44662.1| GM15280 [Drosophila sechellia]
gi|194198924|gb|EDX12500.1| GD19204 [Drosophila simulans]
gi|220947948|gb|ACL86517.1| Cbp20-PA [synthetic construct]
gi|220957182|gb|ACL91134.1| Cbp20-PA [synthetic construct]
Length = 154
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>gi|332030010|gb|EGI69835.1| Nuclear cap-binding protein subunit 2 [Acromyrmex echinatior]
Length = 165
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 105/129 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F GT+ E + L S T+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 14 ELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R D E ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 74 YKKTPCGFCFIEYYNRADAESCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 133
Query: 162 DEYRTDYDP 170
DEYR+D+D
Sbjct: 134 DEYRSDFDS 142
>gi|125778396|ref|XP_001359956.1| GA11577 [Drosophila pseudoobscura pseudoobscura]
gi|195157832|ref|XP_002019798.1| GL12592 [Drosophila persimilis]
gi|122109500|sp|Q293V6.1|NCBP2_DROPS RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|259511686|sp|B4GLK8.1|NCBP2_DROPE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|54639706|gb|EAL29108.1| GA11577 [Drosophila pseudoobscura pseudoobscura]
gi|194116389|gb|EDW38432.1| GL12592 [Drosophila persimilis]
Length = 154
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLKDSCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYIRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>gi|389610041|dbj|BAM18632.1| cap binding protein 20 [Papilio xuthus]
Length = 161
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/125 (63%), Positives = 105/125 (84%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
++S+YRD+ F G++ E E+ L AS+T+Y+GN+SFYTTEEQIYELF R GEI++++MGLDK
Sbjct: 13 EISSYRDQHFKGSRNEQEKLLRASSTLYIGNLSFYTTEEQIYELFMRCGEIRRVVMGLDK 72
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 73 YKKTPCGFCFVEYYARPDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVR 132
Query: 162 DEYRT 166
DEYRT
Sbjct: 133 DEYRT 137
>gi|259511469|sp|Q8JGR6.2|NCBP2_DANRE RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
Length = 155
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 33 MASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ +LF D +S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ELF++ G+
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHELFAKCGD 64
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+
Sbjct: 65 VKRIIIGLDKIKKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQY 124
Query: 152 GRGRSGGQVRDEYRTDYDP 170
GRG+SGGQVRDEYR DYDP
Sbjct: 125 GRGKSGGQVRDEYRQDYDP 143
>gi|195497527|ref|XP_002096138.1| GE25514 [Drosophila yakuba]
gi|259511690|sp|B4PL68.1|NCBP2_DROYA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|194182239|gb|EDW95850.1| GE25514 [Drosophila yakuba]
Length = 154
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYIRSEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>gi|432855134|ref|XP_004068089.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Oryzias
latipes]
Length = 164
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
++S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ELF++ G++K+II+GLDK
Sbjct: 15 EVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFAKCGDVKRIIIGLDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+GRG+SGGQVR
Sbjct: 75 VKKTACGFCFVEYYTRGDAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVR 134
Query: 162 DEYRTDYDP 170
DEYR DYDP
Sbjct: 135 DEYRQDYDP 143
>gi|57530195|ref|NP_001006430.1| nuclear cap-binding protein subunit 2 [Gallus gallus]
gi|82233852|sp|Q5ZKR5.1|NCBP2_CHICK RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|53130698|emb|CAG31678.1| hypothetical protein RCJMB04_9i16 [Gallus gallus]
Length = 168
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 22 ISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
+S LL LS + S ++S YRD+ F G+++ E+ L S+T+YVGN+SFYTTEEQ
Sbjct: 1 MSGLLHTTLSGLNS--DSYCEISRYRDQHFRGSKKLQEKFLKISSTLYVGNLSFYTTEEQ 58
Query: 82 IYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
I ELFS+ G++K+I+MGLDK KTPCGFCF +Y+R D E A+++I+GT LDDR +R D+
Sbjct: 59 IQELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIVRTDW 118
Query: 142 DWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 119 DAGFKEGRQYGRGKTGGQVRDEYRTDYD 146
>gi|307197645|gb|EFN78824.1| Nuclear cap-binding protein subunit 2 [Harpegnathos saltator]
Length = 165
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L S+T+YVGN+SFYTTEEQIYELFS+ G++++IIMGLDK
Sbjct: 14 ELSSYRDQHFKGSRAEQDRLLRNSSTLYVGNLSFYTTEEQIYELFSKCGDVRRIIMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 74 YKKTPCGFCFIEYYQRADAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 133
Query: 162 DEYRTDYDP 170
DEYR+D+D
Sbjct: 134 DEYRSDFDS 142
>gi|322789715|gb|EFZ14881.1| hypothetical protein SINV_03383 [Solenopsis invicta]
Length = 165
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/129 (63%), Positives = 104/129 (80%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F GT+ E + L S T+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 14 ELSSYRDQHFKGTRAEQDRLLRNSCTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 74 YKKTPCGFCFVEYYQRCDAEHCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 133
Query: 162 DEYRTDYDP 170
DEYR+D+D
Sbjct: 134 DEYRSDFDS 142
>gi|328877034|gb|EGG25397.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 105/125 (84%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y D++ T ++F++A+ STT+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+ KT
Sbjct: 12 YFDKKSGFTYDDFQKAIEVSTTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRLQKT 71
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y++ED D +KYI+GT LD+R IR D+D+GF++GRQ+GRG SGGQVRDEYR
Sbjct: 72 PCGFCFVEYYAKEDAADCIKYINGTKLDERLIRCDWDYGFKEGRQYGRGASGGQVRDEYR 131
Query: 166 TDYDP 170
TDYDP
Sbjct: 132 TDYDP 136
>gi|198424069|ref|XP_002127821.1| PREDICTED: similar to nuclear cap binding protein subunit 2 [Ciona
intestinalis]
Length = 185
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 111/140 (79%), Gaps = 1/140 (0%)
Query: 32 AMASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
+ LFKD L+AYRD+ F G++ + E+ L S+T+YVGN+S+YTTEEQIYELFS+ G
Sbjct: 10 TLRPLFKDPGVDLTAYRDQHFKGSRMQQEKLLKMSSTLYVGNLSYYTTEEQIYELFSKCG 69
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
++K+++MGLDK KTPCGFCF + R E+AV+YI+GT LDDR +R D+D GF++GRQ
Sbjct: 70 DLKRVVMGLDKFKKTPCGFCFVEYCERLCAENAVRYINGTRLDDRVVRTDWDAGFKEGRQ 129
Query: 151 WGRGRSGGQVRDEYRTDYDP 170
+GRG++GGQVRDEYR D+DP
Sbjct: 130 FGRGKAGGQVRDEYRMDFDP 149
>gi|119574008|gb|EAW53623.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_c [Homo
sapiens]
Length = 176
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/119 (69%), Positives = 98/119 (82%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK KT CGFCF
Sbjct: 46 EGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCF 105
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 106 VEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 164
>gi|307186261|gb|EFN71924.1| Nuclear cap-binding protein subunit 2 [Camponotus floridanus]
Length = 165
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 105/129 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E + L S+T+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK
Sbjct: 14 ELSSYRDQHFKGSRAEQDRLLRNSSTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E ++Y++GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 74 YKKTPCGFCFVEYYQRFDAEHCMRYVNGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVR 133
Query: 162 DEYRTDYDP 170
DEYR+D+D
Sbjct: 134 DEYRSDFDS 142
>gi|410921882|ref|XP_003974412.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Takifugu
rubripes]
Length = 164
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 105/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G E E+ L ++ T+YVGN+SFYTTEEQ++ELFS++G++K+II+GLDK
Sbjct: 16 ISQYRDQHFKGKCSEQEKLLKSTHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R E+A+++I+GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRAGAENAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|291290891|ref|NP_001167476.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus laevis]
gi|259016297|sp|P52299.2|NCBP2_XENLA RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|49117075|gb|AAH72902.1| Unknown (protein for MGC:80352) [Xenopus laevis]
Length = 153
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 103/128 (80%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS YRD+ F G + + E L S T+YVGN+SFYTTEEQI+ELFS++G++K+I+MGLDK
Sbjct: 14 LSQYRDQHFRGNRSDQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKV 73
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E A+++I+GT LDDR +R D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 74 KKTACGFCFVEYYTRADAEQAMRFINGTRLDDRIVRTDWDAGFKEGRQYGRGKSGGQVRD 133
Query: 163 EYRTDYDP 170
EYR DYD
Sbjct: 134 EYRQDYDA 141
>gi|55742232|ref|NP_001006879.1| nuclear cap-binding protein subunit 2 [Xenopus (Silurana)
tropicalis]
gi|82235814|sp|Q6DES0.1|NCBP2_XENTR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|49903766|gb|AAH77024.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus (Silurana)
tropicalis]
gi|89266769|emb|CAJ81729.1| nuclear cap binding protein subunit 2, 20kDa [Xenopus (Silurana)
tropicalis]
Length = 153
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Query: 32 AMASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
A+ +L D +LS YRD+ F G + + E L S T+YVGN+SFYTTEEQI+ELFS++G
Sbjct: 2 ALGALKSDSYVELSQYRDQHFRGNRSDQECLLKHSCTLYVGNLSFYTTEEQIHELFSKSG 61
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
++KKI+MGLDK KT CGFCF +Y+R D E A+++I+GT LDDR IR D+D GF++GRQ
Sbjct: 62 DVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDAGFKEGRQ 121
Query: 151 WGRGRSGGQVRDEYRTDYDP 170
+GRG+SGGQVRDEYR DYD
Sbjct: 122 YGRGKSGGQVRDEYRQDYDA 141
>gi|391342380|ref|XP_003745498.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Metaseiulus
occidentalis]
Length = 152
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 103/127 (81%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LSAYRD+ F G++ E E L STT+YVGN+SFYTTEEQI+ELF R G++K++IMGLD+
Sbjct: 8 LSAYRDQHFKGSRAEQERLLRTSTTLYVGNLSFYTTEEQIFELFDRCGDVKRVIMGLDRF 67
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y R D E+A+ +++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 68 QKTPCGFCFVEYYDRADAENAMCWVNGTKLDDRIIRTDWDAGFIEGRQYGRGKSGGQVRD 127
Query: 163 EYRTDYD 169
EYR D+D
Sbjct: 128 EYRNDFD 134
>gi|392886211|ref|NP_001250552.1| Protein NCBP-2, isoform a [Caenorhabditis elegans]
gi|408360164|sp|Q93594.2|NCBP2_CAEEL RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|345107386|emb|CCD31067.1| Protein NCBP-2, isoform a [Caenorhabditis elegans]
Length = 158
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 106/131 (80%)
Query: 41 RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLD 100
+++SAYRD+R+ GT + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IMGLD
Sbjct: 12 KEISAYRDQRYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLD 71
Query: 101 KNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ GGQV
Sbjct: 72 RFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKHGGQV 131
Query: 161 RDEYRTDYDPD 171
RDEYR DYDP+
Sbjct: 132 RDEYRKDYDPE 142
>gi|259511695|sp|A2SW84.1|NCBP2_SINCH RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|86212470|gb|ABC87764.1| nuclear cap binding protein [Siniperca chuatsi]
Length = 165
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 105/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + + E+ L S T+YVGN+SFYTTEEQ++ELFS++G++K+II+GLDK
Sbjct: 16 VSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R E+A+++I+GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRAGAENAMRFINGTRLDDRIIRADWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|195393734|ref|XP_002055508.1| GJ18756 [Drosophila virilis]
gi|259511297|sp|B4M205.1|NCB2A_DROVI RecName: Full=Nuclear cap-binding protein subunit 2-A; AltName:
Full=20 kDa nuclear cap-binding protein A; AltName:
Full=NCBP 20 kDa subunit A; Short=CBP20-A
gi|194150018|gb|EDW65709.1| GJ18756 [Drosophila virilis]
Length = 154
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ + G++ E E +L S+T+YVGN+SFYT EEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHYKGSRFEQERSLRDSSTLYVGNLSFYTAEEQIHELFSRCGDVRMIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYKRSEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYD 169
DEYRTDYD
Sbjct: 126 DEYRTDYD 133
>gi|395528326|ref|XP_003766281.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Sarcophilus
harrisii]
Length = 138
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 100/121 (82%)
Query: 50 RFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGF 109
+F G +++ E+ L S T+YVGN+SFYTTEEQIYELF ++G+IKKIIMGLDK KT CGF
Sbjct: 5 KFQGDKKDQEKLLKKSCTLYVGNLSFYTTEEQIYELFGKSGDIKKIIMGLDKVKKTACGF 64
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
CF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 65 CFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRKDYD 124
Query: 170 P 170
Sbjct: 125 A 125
>gi|341880669|gb|EGT36604.1| CBN-NCBP-2 protein [Caenorhabditis brenneri]
Length = 157
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 39 DQRK-LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
DQ K +SAYRD+R+ G+ + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IM
Sbjct: 9 DQPKDISAYRDQRYQGSVRDQENALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIM 68
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ G
Sbjct: 69 GLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFVEGRQYGRGKHG 128
Query: 158 GQVRDEYRTDYDPD 171
GQVRDEYR DYDP+
Sbjct: 129 GQVRDEYRKDYDPE 142
>gi|308476832|ref|XP_003100631.1| CRE-NCBP-2 protein [Caenorhabditis remanei]
gi|308264649|gb|EFP08602.1| CRE-NCBP-2 protein [Caenorhabditis remanei]
Length = 189
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 39 DQRK-LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
DQ K +SAYRD+R+ G+ + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IM
Sbjct: 9 DQPKDISAYRDQRYQGSVRDQEVALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIM 68
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ G
Sbjct: 69 GLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFVEGRQYGRGKHG 128
Query: 158 GQVRDEYRTDYDPD 171
GQVRDEYR DYDP+
Sbjct: 129 GQVRDEYRKDYDPE 142
>gi|383850397|ref|XP_003700782.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Megachile
rotundata]
Length = 166
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/124 (64%), Positives = 102/124 (82%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ E + L STT+YVGN+SFYTTEEQIYELFS+ G+I++IIMGLDK KT
Sbjct: 19 YRDQHFKGSRAEQDRLLRNSTTLYVGNLSFYTTEEQIYELFSKCGDIRRIIMGLDKYKKT 78
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y R D E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVRDEYR
Sbjct: 79 PCGFCFVEYYQRSDAENCMRYINGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVRDEYR 138
Query: 166 TDYD 169
+D+D
Sbjct: 139 SDFD 142
>gi|240848909|ref|NP_001155582.1| nuclear cap-binding protein subunit 2-like [Acyrthosiphon pisum]
gi|239793400|dbj|BAH72824.1| ACYPI004714 [Acyrthosiphon pisum]
Length = 159
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 106/127 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S+YRD+ F G++ E ++ L STT+Y+GN++FYTTE QIYELFS+ G+IK+I+MGLDK
Sbjct: 4 VSSYRDQHFKGSRGELDKILRLSTTIYIGNLAFYTTEGQIYELFSKCGDIKRIVMGLDKF 63
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED ++ +++++ T LDDR IR D+D GF +GRQ+GRG++GGQVRD
Sbjct: 64 KKTPCGFCFIEYYTREDADNCMRFVNSTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVRD 123
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 124 EYRTDYD 130
>gi|27545255|ref|NP_775356.1| nuclear cap-binding protein subunit 2 [Danio rerio]
gi|20977581|gb|AAM28218.1| nuclear cap binding protein subunit 2 [Danio rerio]
Length = 155
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 104/128 (81%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ LF++ G++K+II+GLDK
Sbjct: 16 VSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHVLFAKCGDVKRIIIGLDKI 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|209489440|gb|ACI49201.1| hypothetical protein Csp3_JD03.010 [Caenorhabditis angaria]
Length = 361
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 107/133 (80%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
+ R +SAYRD+R+ G+ + E AL STT+YVGN+S++T E+Q+YELF RAG+++++IMG
Sbjct: 10 NPRDVSAYRDQRYQGSLRDQEIALRTSTTLYVGNLSYFTKEDQVYELFGRAGDVRRVIMG 69
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
LD+ KTPCGFCF +Y+RED E A++ I+ T LDDR +R D+D GF +GRQ+GRG+ GG
Sbjct: 70 LDRFKKTPCGFCFVEYYTREDAELALQNITNTRLDDRLVRADWDAGFIEGRQYGRGKHGG 129
Query: 159 QVRDEYRTDYDPD 171
QVRDEYR D+DP+
Sbjct: 130 QVRDEYRKDFDPE 142
>gi|47211818|emb|CAF95006.1| unnamed protein product [Tetraodon nigroviridis]
Length = 154
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 104/128 (81%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G E E+ L + T+YVGN+SFYTTEEQ++ELFS++G++K+II+GLDK
Sbjct: 16 ISQYRDQHFKGKCSEQEKLLKTTHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R E+A+++++GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRAGAENAMRFLNGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>gi|259511471|sp|A8Y1R8.2|NCBP2_CAEBR RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
Length = 157
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 39 DQRK-LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
DQ K +SAYRD+R+ G+ + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IM
Sbjct: 9 DQPKDISAYRDQRYQGSVRDQELALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIM 68
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ G
Sbjct: 69 GLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFVEGRQYGRGKHG 128
Query: 158 GQVRDEYRTDYDPD 171
GQVRDEYR DYDP+
Sbjct: 129 GQVRDEYRKDYDPE 142
>gi|344286334|ref|XP_003414914.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Loxodonta
africana]
Length = 207
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 104/129 (80%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD++F G +E E+ L S+T+YVGN+SFYTTE+QIYELF R G+IK + MGLDK
Sbjct: 60 ELSEYRDQQFNGNNDEQEKLLKESSTLYVGNLSFYTTEDQIYELFGRCGDIKNVFMGLDK 119
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +++R D E+A+++++GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 120 IKKTACGFCFVEYHTRADAENAMRFLNGTYLDDRIIRTDWDLGFREGRQYGRGRSGGQVR 179
Query: 162 DEYRTDYDP 170
DE+R D+D
Sbjct: 180 DEFREDFDA 188
>gi|242022257|ref|XP_002431557.1| Nuclear cap-binding protein subunit, putative [Pediculus humanus
corporis]
gi|212516860|gb|EEB18819.1| Nuclear cap-binding protein subunit, putative [Pediculus humanus
corporis]
Length = 170
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 102/125 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E L S+T+YVGN++FYTTEEQIYELFS+ G+IK+IIMGLDK
Sbjct: 11 ELSSYRDQHFKGSRGEQERLLRVSSTLYVGNLAFYTTEEQIYELFSKCGDIKRIIMGLDK 70
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R D E ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 71 FRKTPCGFCFVEYYLRSDAECCMRYINGTRLDDRIIRTDWDAGFVEGRQYGRGKTGGQVR 130
Query: 162 DEYRT 166
DEYRT
Sbjct: 131 DEYRT 135
>gi|268563881|ref|XP_002638958.1| C. briggsae CBR-NCBP-2 protein [Caenorhabditis briggsae]
Length = 153
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 39 DQRK-LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
DQ K +SAYRD+R+ G+ + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IM
Sbjct: 9 DQPKDISAYRDQRYQGSVRDQELALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIM 68
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ G
Sbjct: 69 GLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFVEGRQYGRGKHG 128
Query: 158 GQVRDEYRTDYDPD 171
GQVRDEYR DYDP+
Sbjct: 129 GQVRDEYRKDYDPE 142
>gi|53733381|gb|AAH83529.1| Ncbp2 protein [Danio rerio]
Length = 155
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
Query: 33 MASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ +LF D +S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ELF++ G+
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHELFAKCGD 64
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+
Sbjct: 65 VKRIIIGLDKIKKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQY 124
Query: 152 GRGRSGGQVRDEYRTDYDP 170
G G+SGGQVRDEYR DYDP
Sbjct: 125 GWGKSGGQVRDEYRQDYDP 143
>gi|321455647|gb|EFX66775.1| hypothetical protein DAPPUDRAFT_231808 [Daphnia pulex]
Length = 152
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/126 (61%), Positives = 104/126 (82%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
S YRD+ F G++ E E L S T+YVGN+SF+TTEEQI+ELF + G++K+IIMGLDK +
Sbjct: 5 STYRDQHFKGSRVEQERLLSQSCTLYVGNLSFFTTEEQIHELFGKCGDVKRIIMGLDKFT 64
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
+TPCGFCF FY R D+E+A+++++GT LDDR +R D+D GF +GRQ+GRG++GGQVRDE
Sbjct: 65 RTPCGFCFVEFYLRNDSENAIRFVNGTRLDDRIVRTDWDAGFIEGRQYGRGKTGGQVRDE 124
Query: 164 YRTDYD 169
YRTD+D
Sbjct: 125 YRTDFD 130
>gi|145356920|ref|XP_001422671.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582914|gb|ABP00988.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 105/137 (76%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA LF D+ L+ Y+DRRF GT +E+ + L ASTT+YVGN+SFYTTE Q++ LF G +
Sbjct: 1 MARLFLDREPLTQYKDRRFNGTLDEYLDRLRASTTLYVGNVSFYTTENQMHALFRSVGVV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ I++GLD +TPCGF F + +R D E V+Y++GT LDDR IR+DFDWG++ GR++G
Sbjct: 61 RAIVVGLDSARRTPCGFAFVEYETRADAERCVRYLNGTKLDDREIRIDFDWGYEPGREFG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG+SGGQVRDEYRT YD
Sbjct: 121 RGKSGGQVRDEYRTYYD 137
>gi|312374367|gb|EFR21936.1| hypothetical protein AND_16009 [Anopheles darlingi]
Length = 622
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 99/119 (83%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
F G++ E E+ L S T+YVGN+SFYTTEEQI+ELFSR G++++I+MGLDK KTPCGFC
Sbjct: 482 FEGSRHEQEKLLRLSATLYVGNLSFYTTEEQIHELFSRCGDVRRIVMGLDKFKKTPCGFC 541
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
F +YSR D E A++YI+GT LDDR +RVD+D GF +GRQ+GRG++GGQVRDEYR D+D
Sbjct: 542 FVEYYSRIDAESAMRYINGTRLDDRIVRVDWDAGFVEGRQYGRGKTGGQVRDEYRQDHD 600
>gi|295660180|ref|XP_002790647.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281522|gb|EEH37088.1| nuclear cap-binding protein subunit 2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 217
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD GTQE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 63 LSKNKRRKFGDRD----GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 118
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+
Sbjct: 119 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGK 178
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 179 SGGQVRDEYRDEYDP 193
>gi|358059162|dbj|GAA95101.1| hypothetical protein E5Q_01756 [Mixia osmundae IAM 14324]
Length = 204
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 100/126 (79%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
S Y+DR+ + E+ + L +STT+YVGNMSF+TTEEQIYELFSR G IK+IIMGLD+ +
Sbjct: 14 SGYKDRQSILSYEDQQAKLASSTTLYVGNMSFFTTEEQIYELFSRTGSIKRIIMGLDRMN 73
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
KTPCGFCF +Y+ +D A++YISGT LDDR IR D D GF GRQ+GRGR+GGQVRDE
Sbjct: 74 KTPCGFCFVEYYTNQDARAAMRYISGTKLDDRVIRADLDPGFIAGRQYGRGRAGGQVRDE 133
Query: 164 YRTDYD 169
YR D+D
Sbjct: 134 YREDFD 139
>gi|358334772|dbj|GAA53215.1| nuclear cap-binding protein subunit 2 [Clonorchis sinensis]
Length = 159
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 102/128 (79%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
S YRDRR + ++ + AL STT+YVGN+SFYT EEQI+ELFSRAGEIK++IMGL +
Sbjct: 18 SPYRDRRNDASSKQLQRALRQSTTLYVGNLSFYTREEQIWELFSRAGEIKRVIMGLHRFH 77
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
KTPCGFCF + +RE E A++Y++ T LDDR IR D+D GF++GRQ+GRGR+GGQVRDE
Sbjct: 78 KTPCGFCFVEYVTREGAEMAMRYVNRTRLDDRVIRTDWDAGFENGRQYGRGRTGGQVRDE 137
Query: 164 YRTDYDPD 171
+R DYD D
Sbjct: 138 FRKDYDAD 145
>gi|984260|emb|CAA59259.1| CAP binding protein [Xenopus laevis]
gi|1582343|prf||2118330B cap-binding protein
Length = 148
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 102/128 (79%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS YRD+ F G + + E L S T+YVGN+SFYTTEEQI+ELFS++G++K+I+MGLDK
Sbjct: 9 LSQYRDQHFRGNRSDQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKV 68
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D A+++I+GT LDDR +R D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 69 KKTACGFCFVEYYTRADAGTAMRFINGTRLDDRIVRTDWDAGFKEGRQYGRGKSGGQVRD 128
Query: 163 EYRTDYDP 170
EYR DYD
Sbjct: 129 EYRQDYDA 136
>gi|281338661|gb|EFB14245.1| hypothetical protein PANDA_004893 [Ailuropoda melanoleuca]
Length = 134
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 98/119 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQV
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQV 134
>gi|72067816|ref|XP_802051.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 165
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 102/125 (81%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LSAYRD+ F G+ + E L ++T+Y+GN+SF+TTEEQIYE+FS+ G IK+++MGLDK
Sbjct: 10 ELSAYRDQHFGGSMDNQERKLKEASTLYIGNLSFFTTEEQIYEVFSKCGSIKRVVMGLDK 69
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
+TPCGFCF +Y RE+ + ++Y+SGT LDDR IR D+D GF++GRQ+GRG+SGGQVR
Sbjct: 70 IKRTPCGFCFVEYYDREEAANCMRYVSGTRLDDRIIRTDWDVGFKEGRQYGRGKSGGQVR 129
Query: 162 DEYRT 166
DEYRT
Sbjct: 130 DEYRT 134
>gi|225678865|gb|EEH17149.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb03]
Length = 177
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD GTQE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 16 LSKNKRRKFGDRD----GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 71
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+
Sbjct: 72 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGK 131
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 132 SGGQVRDEYRDEYDP 146
>gi|226293700|gb|EEH49120.1| nuclear cap-binding protein subunit 2 [Paracoccidioides
brasiliensis Pb18]
Length = 170
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD GTQE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 16 LSKNKRRKFGDRD----GTQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 71
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+
Sbjct: 72 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGK 131
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 132 SGGQVRDEYRDEYDP 146
>gi|225718120|gb|ACO14906.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
gi|225718372|gb|ACO15032.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
Length = 161
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 102/124 (82%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ E E+ L STT+YVGN+SF+TTE Q+YELF + G++K+I+MGLDK +T
Sbjct: 17 YRDQHFKGSRNEQEKLLKHSTTLYVGNLSFFTTEGQLYELFGKCGDVKRIVMGLDKFKRT 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y+RED E A+K+++ T LDDR +R D+D GF +GRQ+GRG+SGGQVRDEYR
Sbjct: 77 PCGFCFVEYYAREDAESAMKFVNTTRLDDRLVRTDWDAGFIEGRQFGRGKSGGQVRDEYR 136
Query: 166 TDYD 169
TDYD
Sbjct: 137 TDYD 140
>gi|255935633|ref|XP_002558843.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583463|emb|CAP91476.1| Pc13g04070 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 178
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 105/133 (78%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
K++R+ RD P +E+ +E L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++M
Sbjct: 22 KNKRRRFNDRDEDEPQQEEKPDEKLKNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVM 81
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SG
Sbjct: 82 GLDRFNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQFGRGKSG 141
Query: 158 GQVRDEYRTDYDP 170
GQVRDEYR +YDP
Sbjct: 142 GQVRDEYREEYDP 154
>gi|344313239|gb|AEN04479.1| putative nuclear cap-binding protein subunit 2 [Plutella
xylostella]
Length = 158
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 101/121 (83%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ E ++ L S+T+Y+GN+SFYTTEEQIYELFS+ G+++++IMGLDK KT
Sbjct: 17 YRDQHFKGSRNEQDKLLRVSSTLYIGNLSFYTTEEQIYELFSKCGDLRRVIMGLDKYKKT 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y RED E+ ++Y++GT LDDR IR D+D GF +GRQ+GRG++GGQVRDEYR
Sbjct: 77 PCGFCFVEYYEREDAENCMRYVNGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVRDEYR 136
Query: 166 T 166
T
Sbjct: 137 T 137
>gi|119574006|gb|EAW53621.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_b [Homo
sapiens]
Length = 172
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 98/119 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQV
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQV 134
>gi|320164899|gb|EFW41798.1| nuclear cap binding protein subunit 2 [Capsaspora owczarzaki ATCC
30864]
Length = 359
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 103/137 (75%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MAS+ S YRD+RF G +EE L STT+YVGN+SF TTE Q+ ELFS+ G +
Sbjct: 1 MASVIPIDFTESQYRDQRFKGEKEEQSRKLANSTTLYVGNLSFTTTEPQMVELFSKCGPV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++++MGLD+ +TPCGF F +Y+R D ED +KY++GT LDDRPIR D+D GF++GRQ+G
Sbjct: 61 RRVVMGLDRIKRTPCGFAFVEYYTRRDAEDCMKYVTGTRLDDRPIRTDWDVGFEEGRQFG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG SGGQVRDE+R D+D
Sbjct: 121 RGMSGGQVRDEFRDDFD 137
>gi|239606356|gb|EEQ83343.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ER-3]
gi|327353068|gb|EGE81925.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 203
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 105/135 (77%), Gaps = 4/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD G QE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 49 LSKNKRRKFGDRD----GPQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 104
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+
Sbjct: 105 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGK 164
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 165 SGGQVRDEYRDEYDP 179
>gi|154274135|ref|XP_001537919.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus NAm1]
gi|150415527|gb|EDN10880.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus NAm1]
gi|240282339|gb|EER45842.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus H143]
gi|325088474|gb|EGC41784.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus H88]
Length = 171
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 105/135 (77%), Gaps = 4/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD G QE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 17 LSKNKRRKHGDRD----GPQEDPIDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 72
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+
Sbjct: 73 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGK 132
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 133 SGGQVRDEYRDEYDP 147
>gi|303312473|ref|XP_003066248.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105910|gb|EER24103.1| Nuclear cap binding protein subunit 2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033670|gb|EFW15617.1| nuclear cap binding protein subunit 2 [Coccidioides posadasii str.
Silveira]
Length = 187
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
+RKL R+ P + E E+ L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGL
Sbjct: 35 RRKLGQGREE--PDEKIEAEDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGL 92
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
D+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQ
Sbjct: 93 DRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQ 152
Query: 160 VRDEYRTDYDP 170
VRDEYR +YDP
Sbjct: 153 VRDEYRDEYDP 163
>gi|119192920|ref|XP_001247066.1| hypothetical protein CIMG_00837 [Coccidioides immitis RS]
gi|392863699|gb|EAS35532.2| nuclear cap-binding protein subunit 2 [Coccidioides immitis RS]
Length = 187
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
+RKL R+ P + E E+ L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGL
Sbjct: 35 RRKLGQGREE--PDEKIEAEDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGL 92
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
D+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQ
Sbjct: 93 DRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQ 152
Query: 160 VRDEYRTDYDP 170
VRDEYR +YDP
Sbjct: 153 VRDEYRDEYDP 163
>gi|195995469|ref|XP_002107603.1| hypothetical protein TRIADDRAFT_19119 [Trichoplax adhaerens]
gi|190588379|gb|EDV28401.1| hypothetical protein TRIADDRAFT_19119 [Trichoplax adhaerens]
Length = 163
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 103/133 (77%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
D LSAYRD++F GT E E L + T+YVGN+SFYTTE Q+YE+FS+ G++K+I+MG
Sbjct: 10 DSVSLSAYRDQQFKGTVTEQESKLKLTCTMYVGNLSFYTTESQLYEVFSKVGDVKRIVMG 69
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
LD+ KTPCGFCF + +RE+ E ++YI+GT +DDR IR D+D GF +GRQ+GRGRSGG
Sbjct: 70 LDRFKKTPCGFCFLTYDTREEAEMCMRYINGTKIDDRIIRTDWDAGFIEGRQYGRGRSGG 129
Query: 159 QVRDEYRTDYDPD 171
QVRDE R D+D +
Sbjct: 130 QVRDECRQDFDAN 142
>gi|290462351|gb|ADD24223.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
Length = 163
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 104/124 (83%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ + E+ L STT+YVGN+SF+TTE Q+YELF + G+IK+I+MGLDK +T
Sbjct: 19 YRDQHFKGSRGDQEKLLKLSTTLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRT 78
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y RE++E+A+++++GT LDDR +R D+D GF +GRQ+GRG+SGGQVRDEYR
Sbjct: 79 PCGFCFVEYYGREESENAMRFVNGTRLDDRVVRTDWDAGFIEGRQFGRGKSGGQVRDEYR 138
Query: 166 TDYD 169
TDYD
Sbjct: 139 TDYD 142
>gi|225712302|gb|ACO11997.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
gi|290561879|gb|ADD38337.1| Nuclear cap-binding protein subunit 2 [Lepeophtheirus salmonis]
Length = 161
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 104/124 (83%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ + E+ L STT+YVGN+SF+TTE Q+YELF + G+IK+I+MGLDK +T
Sbjct: 17 YRDQHFKGSRGDQEKLLKLSTTLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRT 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y RE++E+A+++++GT LDDR +R D+D GF +GRQ+GRG+SGGQVRDEYR
Sbjct: 77 PCGFCFVEYYGREESENAMRFVNGTRLDDRVVRTDWDAGFIEGRQFGRGKSGGQVRDEYR 136
Query: 166 TDYD 169
TDYD
Sbjct: 137 TDYD 140
>gi|225717612|gb|ACO14652.1| Nuclear cap-binding protein subunit 2 [Caligus clemensi]
Length = 161
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 101/124 (81%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YRD+ F G++ E E+ L STT+YVGN+SF+TTE Q+YELF + G++K+ +MGLDK +T
Sbjct: 17 YRDQHFKGSRNEQEKLLKHSTTLYVGNLSFFTTEGQLYELFGKCGDVKRFVMGLDKFKRT 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +Y+RED E A+K+++ T LDDR +R D+D GF +GRQ+GRG+SGGQVRDEYR
Sbjct: 77 PCGFCFVEYYAREDAESAMKFVNTTRLDDRLVRTDWDAGFIEGRQFGRGKSGGQVRDEYR 136
Query: 166 TDYD 169
TDYD
Sbjct: 137 TDYD 140
>gi|428174824|gb|EKX43717.1| hypothetical protein GUITHDRAFT_153153 [Guillardia theta CCMP2712]
Length = 230
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L+ Q + + Y DR T EE+ +A+ ST +Y+GN+S++TTE QIYE FSR GE+
Sbjct: 1 MADLYC-QYERTPYFDRHSGMTYEEYHQAIEKSTCLYIGNLSYFTTEAQIYEFFSRCGEV 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K++IMGLD+ KTPCGFCF +Y+ EDTE +++Y++G LDDRPIR+D D GF +GRQ+G
Sbjct: 60 KRVIMGLDRFQKTPCGFCFVEYYTEEDTEASIRYLNGLKLDDRPIRLDRDPGFVEGRQYG 119
Query: 153 RGRSGGQVRDEYRTDYD 169
RG+SGGQVRDEYR D+D
Sbjct: 120 RGKSGGQVRDEYRLDFD 136
>gi|326925913|ref|XP_003209151.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Meleagris
gallopavo]
Length = 154
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 97/118 (82%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
GT+ + E L S T+YVGN+SFYTTEEQI+ELF ++G+IKKIIMGLDK KT CGFCF
Sbjct: 25 GTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKIIMGLDKVKKTACGFCFV 84
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+Y+R D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 85 EYYARGDAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 142
>gi|452843109|gb|EME45044.1| hypothetical protein DOTSEDRAFT_70923 [Dothistroma septosporum
NZE10]
Length = 187
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
RDR Q + E+ L +TT+YVGN+SFYTTEEQI+ LFS GEIK+++MGLD+ SKTP
Sbjct: 42 RDRDRSDNQPDIEDKLKHATTLYVGNLSFYTTEEQIHTLFSSCGEIKRLVMGLDRFSKTP 101
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF +Y+ ED D +KY+ GT LD+R IR D D GF +GRQ+GRGRSGGQVRDEYR
Sbjct: 102 CGFCFVEYYTHEDALDCLKYVGGTKLDERIIRADLDEGFAEGRQYGRGRSGGQVRDEYRE 161
Query: 167 DYDP 170
+YDP
Sbjct: 162 EYDP 165
>gi|429860697|gb|ELA35423.1| nuclear cap binding protein subunit 2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 174
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 103/132 (78%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
+++R+ + +RD E E+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++M
Sbjct: 22 RNKRRRNDHRDDEDSRPAEPAEDPLAHATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVM 81
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SG
Sbjct: 82 GLDRFNKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERVIRTDLDPGFEEGRQYGRGKSG 141
Query: 158 GQVRDEYRTDYD 169
G+VRDEYR DYD
Sbjct: 142 GEVRDEYREDYD 153
>gi|452984797|gb|EME84554.1| hypothetical protein MYCFIDRAFT_214779 [Pseudocercospora fijiensis
CIRAD86]
Length = 178
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 99/139 (71%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
AM+ K +R D + EE L +TT+YVGN+SFYTTEEQI+ LFS GE
Sbjct: 20 AMSKYKKRKRAPHEEHDESKRAPSPDLEEKLANATTLYVGNLSFYTTEEQIHSLFSTCGE 79
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
IK+++MGLD+ +KTPCGFCF +Y+ +D D +KY+ GT LD+R IR D D GF +GRQ+
Sbjct: 80 IKRLVMGLDRFAKTPCGFCFVEYYTHQDALDCLKYVGGTKLDERIIRTDLDEGFSEGRQY 139
Query: 152 GRGRSGGQVRDEYRTDYDP 170
GRGRSGGQVRDEYR +YDP
Sbjct: 140 GRGRSGGQVRDEYRDEYDP 158
>gi|225559401|gb|EEH07684.1| nuclear cap binding protein subunit 2 [Ajellomyces capsulatus
G186AR]
Length = 172
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 108/144 (75%), Gaps = 4/144 (2%)
Query: 27 LGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELF 86
L + SA +++R+ RD G QE+ + L +TT+YVGN+SFYTTEEQI+ELF
Sbjct: 9 LDKPSAYYLSKQNKRRKHGDRD----GPQEDPIDPLKDATTLYVGNLSFYTTEEQIHELF 64
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
++ GEIK+++MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ
Sbjct: 65 AKCGEIKRLVMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQ 124
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 125 EGRQYGRGKSGGQVRDEYRDEYDP 148
>gi|315050526|ref|XP_003174637.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
gi|311339952|gb|EFQ99154.1| nuclear cap-binding protein subunit 2 [Arthroderma gypseum CBS
118893]
Length = 167
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Query: 38 KDQRKLSAY-RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
K++R+ S + R+R Q +F+ L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++
Sbjct: 21 KNKRRKSYHDREREEDKPQADFDATLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLV 80
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLD+ KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+S
Sbjct: 81 MGLDRFQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKS 140
Query: 157 GGQVRDEYRTDYDP 170
GGQVRDE+R ++DP
Sbjct: 141 GGQVRDEFRDEFDP 154
>gi|449270094|gb|EMC80813.1| Nuclear cap-binding protein subunit 2, partial [Columba livia]
Length = 131
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 98/119 (82%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
GT+ + E L S T+YVGN+SFYTTEEQI+ELFS++G+IKK+IMGLDK KT CGFCF
Sbjct: 1 QGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFSKSGDIKKVIMGLDKVKKTACGFCF 60
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+Y+R D E+A+++I+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 61 VEYYTRGDAENAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 119
>gi|189188792|ref|XP_001930735.1| nuclear cap-binding protein subunit 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330939415|ref|XP_003305844.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
gi|187972341|gb|EDU39840.1| nuclear cap-binding protein subunit 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311316986|gb|EFQ86077.1| hypothetical protein PTT_18794 [Pyrenophora teres f. teres 0-1]
Length = 168
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
Query: 27 LGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELF 86
L + S+ A+ K +R + D R G E+ L +TT+YVGN+SFYTTEEQI+ELF
Sbjct: 11 LDKPSSYATAKKRKRHQNTRDDDR--GRSPSPEDKLRDATTLYVGNLSFYTTEEQIHELF 68
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
S+ GEIK+++MGLD+ KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF
Sbjct: 69 SKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERVIRTDLDEGFA 128
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 129 EGRQYGRGKSGGQVRDEYRAEYDP 152
>gi|378734572|gb|EHY61031.1| hypothetical protein HMPREF1120_08971 [Exophiala dermatitidis
NIH/UT8656]
Length = 166
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 98/123 (79%)
Query: 48 DRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPC 107
DR G + E ++ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ KTPC
Sbjct: 20 DRDGAGNKAEEDDELKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPC 79
Query: 108 GFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
GFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDEYR +
Sbjct: 80 GFCFVEYYTHQDALDCMKYIGGTKLDERVIRTDLDVGFQEGRQYGRGKSGGQVRDEYRDE 139
Query: 168 YDP 170
+DP
Sbjct: 140 FDP 142
>gi|320590561|gb|EFX03004.1| small subunit of nuclear cap-binding protein complex [Grosmannia
clavigera kw1407]
Length = 218
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/118 (62%), Positives = 95/118 (80%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P + ++ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF
Sbjct: 39 PDKPQAIDDPLRNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCF 98
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 99 VEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGRSGGQVRDEYRDDYD 156
>gi|346971258|gb|EGY14710.1| nuclear cap-binding protein subunit 2 [Verticillium dahliae
VdLs.17]
Length = 186
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 105/145 (72%), Gaps = 8/145 (5%)
Query: 30 LSAMASLFKDQRKLSAYRDRR-----FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYE 84
L ++ + ++ K Y DR P QE+ L STT+YVGN+SFYTTEEQ+YE
Sbjct: 12 LDRPSAYYHNKNKRRRYNDREEEADAPPAPQED---PLANSTTLYVGNLSFYTTEEQVYE 68
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
LF++ GEIK+++MGLD+ +KTPCGFCF +++ +D D +KYI GT LD+R IR D D G
Sbjct: 69 LFAKCGEIKRLVMGLDRFNKTPCGFCFVEYFTHQDALDCMKYIGGTKLDERVIRTDLDPG 128
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
F++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 129 FEEGRQYGRGKSGGQVRDEYREDYD 153
>gi|406864547|gb|EKD17592.1| nuclear cap binding protein subunit 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 178
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 106/144 (73%), Gaps = 3/144 (2%)
Query: 27 LGELSAMASLFKDQRKLSAYRDR-RFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYEL 85
L + SA +R S DR R P +E E+ L +TT+YVGN+SFYTTEEQI+EL
Sbjct: 12 LDKPSAYYQSRNKKRNYSRDDDRDRTP--EEPAEDPLKDATTLYVGNLSFYTTEEQIHEL 69
Query: 86 FSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGF 145
FS+ GEIK++IMGLD+ SKTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF
Sbjct: 70 FSKCGEIKRLIMGLDRFSKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGF 129
Query: 146 QDGRQWGRGRSGGQVRDEYRTDYD 169
Q+GRQ+GRG+SGGQVRDEYR +YD
Sbjct: 130 QEGRQYGRGKSGGQVRDEYREEYD 153
>gi|407921598|gb|EKG14739.1| hypothetical protein MPH_08014 [Macrophomina phaseolina MS6]
Length = 173
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 94/114 (82%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
+FEE L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGLD+ KTPCGFCF +Y+
Sbjct: 43 DFEEKLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRYQKTPCGFCFVEYYN 102
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 103 HQDALDCMKYIGGTKLDERIIRTDLDEGFAEGRQYGRGKSGGQVRDEYRDEYDP 156
>gi|313233270|emb|CBY24385.1| unnamed protein product [Oikopleura dioica]
Length = 202
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 113/152 (74%), Gaps = 12/152 (7%)
Query: 26 LLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYEL 85
LL L A S+ ++SAYRD +F GT++E + L S+T+YVGN+SFYTTEEQ+ +L
Sbjct: 19 LLRPLKADPSV-----EVSAYRDNQFKGTRKEQDRLLHTSSTLYVGNLSFYTTEEQLTDL 73
Query: 86 FSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGT-------ILDDRPIR 138
F + G++K++IMGLDK +TPCGFCF +Y+R+ E+ +++++GT LDDR IR
Sbjct: 74 FGKCGDLKRVIMGLDKVKRTPCGFCFVEYYNRKSAENCLRWVNGTRLDRSISRLDDRIIR 133
Query: 139 VDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D+D GF +GRQ+GRG++GGQVRDEYRTDYDP
Sbjct: 134 TDWDAGFIEGRQYGRGKTGGQVRDEYRTDYDP 165
>gi|310789500|gb|EFQ25033.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 190
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 93/111 (83%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +
Sbjct: 52 EDPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQ 111
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 112 DALDCMKYIGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 162
>gi|345569023|gb|EGX51892.1| hypothetical protein AOL_s00043g626 [Arthrobotrys oligospora ATCC
24927]
Length = 220
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 93/111 (83%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ E
Sbjct: 89 EDPLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFAKTPCGFCFVEYYTHE 148
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D D +KYI GT LD+R +R D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 149 DALDCMKYIGGTKLDERIVRTDLDPGFKEGRQYGRGKSGGQVRDEYREDYD 199
>gi|242776508|ref|XP_002478850.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
gi|218722469|gb|EED21887.1| small subunit of nuclear cap-binding protein complex [Talaromyces
stipitatus ATCC 10500]
Length = 174
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 104/141 (73%), Gaps = 1/141 (0%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
L ++ ++ + K Y DR E+ + L +TT+YVGN+SFYTTEEQI+ELF++
Sbjct: 11 LDRPSAYYQSKNKRRRYNDRDDE-KHEDPTDNLRNATTLYVGNLSFYTTEEQIHELFAKC 69
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
GEIK+++MGLD+ KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GR
Sbjct: 70 GEIKRLVMGLDRFQKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFQEGR 129
Query: 150 QWGRGRSGGQVRDEYRTDYDP 170
Q+GRG+SGGQVRDEYR +YDP
Sbjct: 130 QYGRGKSGGQVRDEYREEYDP 150
>gi|340516274|gb|EGR46523.1| predicted protein [Trichoderma reesei QM6a]
Length = 178
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+IIMGLD+ +KTPCGFCF +Y+ +D
Sbjct: 49 DPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRIIMGLDRFNKTPCGFCFVEYYTHQD 108
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 109 ALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 158
>gi|212532775|ref|XP_002146544.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
gi|210071908|gb|EEA25997.1| small subunit of nuclear cap-binding protein complex [Talaromyces
marneffei ATCC 18224]
Length = 174
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 95/116 (81%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E+ ++L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGLD+ KTPCGFCF +
Sbjct: 35 HEDPNDSLRNATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEY 94
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 95 YTHQDALDCLKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREEYDP 150
>gi|453085264|gb|EMF13307.1| nuclear cap binding protein subunit 2 [Mycosphaerella populorum
SO2202]
Length = 177
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 92/114 (80%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
+ EE L +TT+YVGN+SFYTTEEQI+ LFS GEIK+++MGLD+ +KTPCGFCF +Y+
Sbjct: 41 DLEEKLQNATTLYVGNLSFYTTEEQIHSLFSTCGEIKRLVMGLDRFAKTPCGFCFVEYYT 100
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
ED D +KY+ GT LD+R IR D D GF +GRQ+GRGRSGGQVRDEYR +YDP
Sbjct: 101 HEDALDCLKYVGGTKLDERIIRTDLDEGFSEGRQYGRGRSGGQVRDEYREEYDP 154
>gi|156033107|ref|XP_001585390.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980]
gi|154699032|gb|EDN98770.1| hypothetical protein SS1G_13629 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 181
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 98/122 (80%)
Query: 48 DRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPC 107
DRR +E ++ L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++IMGLD+ +KTPC
Sbjct: 35 DRRERTPEEPADDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPC 94
Query: 108 GFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
GFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDEYR +
Sbjct: 95 GFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREE 154
Query: 168 YD 169
YD
Sbjct: 155 YD 156
>gi|326924281|ref|XP_003208358.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Meleagris
gallopavo]
Length = 141
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/117 (63%), Positives = 99/117 (84%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G+++ E+ L S+T+YVGN+SFYTTEEQI ELFS+ G++K+I+MGLDK KTPCGFCF
Sbjct: 3 GSKKLQEKFLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDKIKKTPCGFCFV 62
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+Y+R D E A+++I+GT LDDR +R D+D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 63 EYYTRADAEHAMRFINGTRLDDRIVRTDWDAGFKEGRQYGRGKTGGQVRDEYRTDYD 119
>gi|169612940|ref|XP_001799887.1| hypothetical protein SNOG_09598 [Phaeosphaeria nodorum SN15]
gi|160702614|gb|EAT82863.2| hypothetical protein SNOG_09598 [Phaeosphaeria nodorum SN15]
Length = 150
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 93/114 (81%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
E E+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ KTPCGFCF +Y+
Sbjct: 22 EPEDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYT 81
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 82 HQDALDCMKYIGGTKLDERVIRTDLDEGFAEGRQYGRGKSGGQVRDEYRNEYDP 135
>gi|71001020|ref|XP_755191.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|66852829|gb|EAL93153.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus Af293]
gi|159129280|gb|EDP54394.1| small subunit of nuclear cap-binding protein complex [Aspergillus
fumigatus A1163]
Length = 184
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 107/148 (72%), Gaps = 4/148 (2%)
Query: 23 SSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQI 82
S+ L ++ + DQRK S R E+ + L +TT+YVGN+SFYTTEEQI
Sbjct: 16 SAYYLAKVRLEIAFGFDQRKYSQDDSER----AEDPIDKLKNATTLYVGNLSFYTTEEQI 71
Query: 83 YELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFD 142
+ELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D
Sbjct: 72 HELFSKCGEIKRLVMGLDRYNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLD 131
Query: 143 WGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
GF++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 132 PGFEEGRQYGRGKSGGQVRDEYREEYDP 159
>gi|327303374|ref|XP_003236379.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326461721|gb|EGD87174.1| nuclear cap binding protein subunit 2 [Trichophyton rubrum CBS
118892]
gi|326478905|gb|EGE02915.1| nuclear cap-binding protein subunit 2 [Trichophyton equinum CBS
127.97]
Length = 168
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 96/116 (82%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
Q +F+ +L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGLD+ KTPCGFCF +
Sbjct: 40 QADFDASLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEY 99
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDE+R ++DP
Sbjct: 100 YTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEFRDEFDP 155
>gi|400601593|gb|EJP69236.1| nuclear cap-binding protein subunit 2 [Beauveria bassiana ARSEF
2860]
Length = 177
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK++IMGLD+ SKTPCGFCF +Y+ +D
Sbjct: 49 DPLADATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFSKTPCGFCFVEYYTHQD 108
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KY+ GT LD+R IR D D GF++GRQ+GRGRSGGQVRDEYR D+D
Sbjct: 109 ALDCMKYVGGTKLDERIIRTDLDPGFEEGRQYGRGRSGGQVRDEYREDFD 158
>gi|389639318|ref|XP_003717292.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae 70-15]
gi|351643111|gb|EHA50973.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae 70-15]
gi|440468875|gb|ELQ38009.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae Y34]
gi|440480932|gb|ELQ61564.1| nuclear cap-binding protein subunit 2 [Magnaporthe oryzae P131]
Length = 185
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 91/108 (84%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
L STT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 44 LANSTTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDAI 103
Query: 122 DAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 104 DCMKYIGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 151
>gi|226483675|emb|CAX74138.1| Nuclear cap-binding protein subunit 2 [Schistosoma japonicum]
Length = 158
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 104/138 (75%), Gaps = 5/138 (3%)
Query: 34 ASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIK 93
AS +K S YRDRR + E + L +TT+Y+GN+SFYT EEQI+ELFSRAGEIK
Sbjct: 13 ASFYK-----SPYRDRRNDHSPRELSKCLRETTTLYIGNLSFYTREEQIWELFSRAGEIK 67
Query: 94 KIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
++IMGL + KTPCGFCF + +R+ E A++YI+ T LDDR IR D+D GF++GRQ+GR
Sbjct: 68 RVIMGLHRFDKTPCGFCFVEYCTRDGAEMAMRYINKTRLDDRIIRTDWDAGFEEGRQYGR 127
Query: 154 GRSGGQVRDEYRTDYDPD 171
GRSGGQVRDE+R DYD +
Sbjct: 128 GRSGGQVRDEFRKDYDAE 145
>gi|396474113|ref|XP_003839494.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
gi|312216063|emb|CBX96015.1| hypothetical protein LEMA_P031670.1 [Leptosphaeria maculans JN3]
Length = 170
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 92/112 (82%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ KTPCGFCF +Y+ +
Sbjct: 43 EDKLRDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQ 102
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 103 DALDCMKYIGGTKLDERIIRTDLDEGFAEGRQYGRGKSGGQVRDEYRNEYDP 154
>gi|302410829|ref|XP_003003248.1| nuclear cap-binding protein subunit 2 [Verticillium albo-atrum
VaMs.102]
gi|261358272|gb|EEY20700.1| nuclear cap-binding protein subunit 2 [Verticillium albo-atrum
VaMs.102]
Length = 186
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 93/111 (83%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L STT+YVGN+SFYTTEEQ+YELF++ GEIK+++MGLD+ +KTPCGFCF +++ +
Sbjct: 43 EDPLANSTTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVEYFTHQ 102
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 103 DALDCMKYIGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 153
>gi|451850516|gb|EMD63818.1| hypothetical protein COCSADRAFT_91061 [Cochliobolus sativus ND90Pr]
Length = 168
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 92/112 (82%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ KTPCGFCF +Y+ +
Sbjct: 41 EDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQ 100
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 101 DALDCMKYIGGTKLDERVIRTDLDEGFTEGRQYGRGKSGGQVRDEYRAEYDP 152
>gi|367049898|ref|XP_003655328.1| hypothetical protein THITE_42108 [Thielavia terrestris NRRL 8126]
gi|347002592|gb|AEO68992.1| hypothetical protein THITE_42108 [Thielavia terrestris NRRL 8126]
Length = 188
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
Query: 56 EEFEEALLA-STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E+ EE LL +TT+YVGN+SFYTTEEQIYELFS+ GEIK+++MGLD+ +KTPCGFCF +
Sbjct: 43 EQTEEDLLKNATTLYVGNLSFYTTEEQIYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEY 102
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
Y+ +D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 103 YTHQDALDCMKYIGGTKLDERVIRTDLDPGFTEGRQYGRGKSGGQVRDEYREDYD 157
>gi|452000551|gb|EMD93012.1| hypothetical protein COCHEDRAFT_1097649 [Cochliobolus
heterostrophus C5]
Length = 168
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 92/112 (82%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ KTPCGFCF +Y+ +
Sbjct: 41 EDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQ 100
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 101 DALDCMKYIGGTKLDERVIRTDLDEGFTEGRQYGRGKSGGQVRDEYRAEYDP 152
>gi|336263214|ref|XP_003346387.1| hypothetical protein SMAC_05283 [Sordaria macrospora k-hell]
gi|380089899|emb|CCC12209.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 194
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 93/114 (81%)
Query: 56 EEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
E ++ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ KTPCGFCF +Y
Sbjct: 47 EAHDDPLKDATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVEYY 106
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 107 THQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 160
>gi|367028146|ref|XP_003663357.1| hypothetical protein MYCTH_2062826 [Myceliophthora thermophila ATCC
42464]
gi|347010626|gb|AEO58112.1| hypothetical protein MYCTH_2062826 [Myceliophthora thermophila ATCC
42464]
Length = 188
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 92/111 (82%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +
Sbjct: 47 EDPLKNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQ 106
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 107 DALDCMKYIGGTKLDERIIRTDLDPGFTEGRQYGRGKSGGQVRDEYREDYD 157
>gi|326469569|gb|EGD93578.1| nuclear cap binding protein subunit 2 [Trichophyton tonsurans CBS
112818]
Length = 168
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 95/116 (81%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
Q +F+ +L +TT+YVGN+SFYTTEEQI+ELF++ GEIK+++MGLD+ KTPCGFCF +
Sbjct: 40 QADFDASLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEY 99
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
Y +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDE+R ++DP
Sbjct: 100 YMHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEFRDEFDP 155
>gi|154315645|ref|XP_001557145.1| nuclear cap binding protein subunit 2 [Botryotinia fuckeliana
B05.10]
gi|347840058|emb|CCD54630.1| similar to nuclear cap binding protein subunit 2 [Botryotinia
fuckeliana]
Length = 181
Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 98/122 (80%)
Query: 48 DRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPC 107
+RR +E ++ L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++IMGLD+ +KTPC
Sbjct: 35 ERRERTPEEPADDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPC 94
Query: 108 GFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
GFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+GRG+SGGQVRDEYR +
Sbjct: 95 GFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREE 154
Query: 168 YD 169
YD
Sbjct: 155 YD 156
>gi|145246436|ref|XP_001395467.1| nuclear cap-binding protein subunit 2 [Aspergillus niger CBS
513.88]
gi|134080183|emb|CAK46163.1| unnamed protein product [Aspergillus niger]
gi|350636821|gb|EHA25179.1| hypothetical protein ASPNIDRAFT_211639 [Aspergillus niger ATCC
1015]
Length = 176
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 105/135 (77%), Gaps = 3/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ ++ + P E+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 20 LGKNKRRKFSHDEGEKP---EDPTDNLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 76
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+
Sbjct: 77 VMGLDRYNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGK 136
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 137 SGGQVRDEYREEYDP 151
>gi|358369812|dbj|GAA86425.1| small subunit of nuclear cap-binding protein complex [Aspergillus
kawachii IFO 4308]
Length = 176
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 105/135 (77%), Gaps = 3/135 (2%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ ++ + P E+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 20 LGKNKRRKFSHDEAEKP---EDPVDNLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 76
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+
Sbjct: 77 VMGLDRYNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGK 136
Query: 156 SGGQVRDEYRTDYDP 170
SGGQVRDEYR +YDP
Sbjct: 137 SGGQVRDEYREEYDP 151
>gi|119480671|ref|XP_001260364.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
gi|119408518|gb|EAW18467.1| small subunit of nuclear cap-binding protein complex [Neosartorya
fischeri NRRL 181]
Length = 196
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 93/111 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 61 DKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVEYYTHQD 120
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 121 ALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDP 171
>gi|358379360|gb|EHK17040.1| hypothetical protein TRIVIDRAFT_41964 [Trichoderma virens Gv29-8]
Length = 178
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK++IMGLD+ +KTPCGFCF +Y+ +D
Sbjct: 50 DPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFNKTPCGFCFVEYYTHQD 109
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 110 ALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFD 159
>gi|302903969|ref|XP_003048974.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729908|gb|EEU43261.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 176
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ SKTPCGFCF +Y+ +D
Sbjct: 43 DPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFSKTPCGFCFVEYYTHQD 102
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 103 ALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFD 152
>gi|449298181|gb|EMC94198.1| hypothetical protein BAUCODRAFT_74746 [Baudoinia compniacensis UAMH
10762]
Length = 178
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 93/114 (81%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
+ EE L ++TT+YVGN+SFYTTEEQI+ LFS+ GEIK+++MGLD+ +KTPCGFCF +Y+
Sbjct: 40 DLEEKLSSATTLYVGNLSFYTTEEQIHALFSKCGEIKRLVMGLDRFTKTPCGFCFVEYYT 99
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D D +KY+ GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 100 HADALDCLKYVGGTKLDERIIRCDLDEGFAEGRQYGRGKSGGQVRDEYREEYDP 153
>gi|238493741|ref|XP_002378107.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
gi|317157348|ref|XP_003190832.1| nuclear cap-binding protein subunit 2 [Aspergillus oryzae RIB40]
gi|220696601|gb|EED52943.1| small subunit of nuclear cap-binding protein complex [Aspergillus
flavus NRRL3357]
Length = 177
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 95/115 (82%)
Query: 56 EEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
E+ + L +TT+YVGN+SFYTTEEQI+ELFS+ GE+K+++MGLD+ +KTPCGFCF +Y
Sbjct: 38 EDPTDNLKNATTLYVGNLSFYTTEEQIHELFSKCGEVKRLVMGLDRFTKTPCGFCFVEYY 97
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+ +D D +KY+ GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 98 THQDALDCLKYVGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDP 152
>gi|171685652|ref|XP_001907767.1| hypothetical protein [Podospora anserina S mat+]
gi|170942787|emb|CAP68440.1| unnamed protein product [Podospora anserina S mat+]
Length = 186
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 94/113 (83%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
E ++ L +TT+YVGN+SF+TTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+
Sbjct: 48 EDDDPLKNATTLYVGNLSFFTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYT 107
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 108 HQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 160
>gi|443900036|dbj|GAC77363.1| CCR4-NOT transcriptional regulation complex, NOT5 subunit
[Pseudozyma antarctica T-34]
Length = 250
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 103/143 (72%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
M+ + + S+YRD R ++ E ++AL + T+Y+GN+SFYTTEEQIYE+F R
Sbjct: 1 MSHILEPLDAPSSYRDSRSHSSKHEQQQALRQTATLYLGNLSFYTTEEQIYEVFGRVANV 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N KTPCGF F FY+ + D ++Y+SGT LD+R IR D D G++
Sbjct: 61 GAGGGIKRIIMGLDRNQKTPCGFAFVEFYTHAEAVDCMRYVSGTKLDERVIRCDLDPGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRGRSGGQVRDEYR +YD
Sbjct: 121 EGRQYGRGRSGGQVRDEYRQEYD 143
>gi|340959251|gb|EGS20432.1| hypothetical protein CTHT_0022620 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 190
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 90/108 (83%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 50 LQNATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRYTKTPCGFCFVEYYTHQDAL 109
Query: 122 DAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 110 DCMKYIGGTKLDERIIRTDLDPGFTEGRQYGRGKSGGQVRDEYREDYD 157
>gi|346319665|gb|EGX89266.1| nuclear cap binding protein subunit 2 [Cordyceps militaris CM01]
Length = 172
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 93/114 (81%)
Query: 56 EEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
E + L +TT+YVGN+SFYTTEEQ+YELF++ GEIK++IMGLD+ SKTPCGFCF +Y
Sbjct: 37 EPQPDPLADATTLYVGNLSFYTTEEQVYELFTKCGEIKRLIMGLDRFSKTPCGFCFVEYY 96
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+ +D D +KY+ GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 97 THQDALDCLKYVGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFD 150
>gi|322699589|gb|EFY91349.1| nuclear cap binding protein subunit 2 [Metarhizium acridum CQMa
102]
Length = 175
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 91/110 (82%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK++IMGLD+ KTPCGFCF +Y+ +D
Sbjct: 45 DPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLIMGLDRFQKTPCGFCFVEYYTHQD 104
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 105 ALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYRDDFD 154
>gi|402077280|gb|EJT72629.1| nuclear cap-binding protein subunit 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 186
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SF+TTEEQIYELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 40 DPLAKATTLYVGNLSFFTTEEQIYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQD 99
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +K+I GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 100 ALDCMKFIGGTKLDERVIRTDLDPGFEEGRQYGRGKSGGQVRDEYRDDYD 149
>gi|409046123|gb|EKM55603.1| hypothetical protein PHACADRAFT_209115 [Phanerochaete carnosa
HHB-10118-sp]
Length = 225
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 107/144 (74%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + + S Y+D + +++ E L STT+Y+GN+SFYTTEEQIYELFS+
Sbjct: 1 MAHVVQPLDQPSNYKDSQARVDRQKQNELLAKSTTLYIGNLSFYTTEEQIYELFSKCASP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + +++Y+SGT LD+R IR D D G++
Sbjct: 61 EEGGGIKRIIMGLDRNTRTPCGFCFVEYYTPAEALASLRYVSGTKLDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+RTDYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRTDYDP 144
>gi|322709267|gb|EFZ00843.1| nuclear cap binding protein subunit 2 [Metarhizium anisopliae ARSEF
23]
Length = 175
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 91/110 (82%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ+YELFS+ GEIK+++MGLD+ KTPCGFCF +Y+ +D
Sbjct: 45 DPLANATTLYVGNLSFYTTEEQVYELFSKCGEIKRLVMGLDRFQKTPCGFCFVEYYTHQD 104
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 105 ALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFD 154
>gi|440633794|gb|ELR03713.1| nuclear cap-binding protein subunit 2 [Geomyces destructans
20631-21]
Length = 177
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 99/130 (76%), Gaps = 1/130 (0%)
Query: 41 RKLSAYRDRR-FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
RK Y DR T E E+ L + T+YVGN+SFYTTEEQI+ELF + GEIK+++MGL
Sbjct: 23 RKKRRYDDREEREKTPEPQEDPLKDAATLYVGNLSFYTTEEQIHELFVKCGEIKRLVMGL 82
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
D+ +KTPCGFCF +Y+ +D D++KYI GT LD+R IR D D GF++GRQ+GRG+SGGQ
Sbjct: 83 DRFNKTPCGFCFVEYYTHQDALDSMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQ 142
Query: 160 VRDEYRTDYD 169
VRDEYR +YD
Sbjct: 143 VRDEYREEYD 152
>gi|395333541|gb|EJF65918.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 224
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 103/144 (71%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + ++ E L STT+YVGN+SFYTTEEQIYELFS+
Sbjct: 1 MAHVITPLDQPSNYKDSQSRVDRQTQNELLSKSTTLYVGNLSFYTTEEQIYELFSKCTTP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +YS + ++YISGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYSHAEALACLRYISGTKLDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
DGRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 DGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|403158869|ref|XP_003319546.2| hypothetical protein PGTG_01720 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166496|gb|EFP75127.2| hypothetical protein PGTG_01720 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 196
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 94/118 (79%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P + E+ + L S+TVYVGN+SF+TTEEQI+ELFS+A IK+IIMGLD+NSKTPCGFCF
Sbjct: 20 PLSYEDQQLQLSRSSTVYVGNLSFFTTEEQIFELFSKAALIKRIIMGLDRNSKTPCGFCF 79
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+Y ED ++YISGT LD+R IR D D G+ DGRQ+GRG+SGGQVRDEYR DYD
Sbjct: 80 VEYYRPEDALACLRYISGTKLDERVIRADLDPGYLDGRQYGRGKSGGQVRDEYREDYD 137
>gi|46122221|ref|XP_385664.1| hypothetical protein FG05488.1 [Gibberella zeae PH-1]
Length = 173
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 94/115 (81%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
QE + L +TT+YVGN+SFYTTEEQ+YELF++ GEIK+++MGLD+ +KTPCGFCF +
Sbjct: 37 QEPQVDPLANATTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVEY 96
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
++ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 97 FTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDFD 151
>gi|358398124|gb|EHK47482.1| hypothetical protein TRIATDRAFT_157468 [Trichoderma atroviride IMI
206040]
Length = 177
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L +TT+YVGN+SFYTTEEQ++ELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 42 DPLANATTLYVGNLSFYTTEEQVHELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQD 101
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 102 ALDCMKYIGGTKLDERIIRTDLDPGFEEGRQFGRGKSGGQVRDEYREDFD 151
>gi|213511937|ref|NP_001134802.1| nuclear cap-binding protein subunit 2 [Salmo salar]
gi|209736168|gb|ACI68953.1| Nuclear cap-binding protein subunit 2 [Salmo salar]
Length = 153
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/129 (56%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 33 MASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ +LF D +S YRD+ F G + E E+ L + T+YVGN+SFYTTEEQ+YELFS++G+
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKSGD 64
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+
Sbjct: 65 VKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQY 124
Query: 152 GRGRSGGQV 160
GRG+SGGQV
Sbjct: 125 GRGKSGGQV 133
>gi|408397109|gb|EKJ76259.1| hypothetical protein FPSE_03514 [Fusarium pseudograminearum CS3096]
Length = 173
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 94/115 (81%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
QE + L +TT+YVGN+SFYTTEEQ+YELF++ GEIK+++MGLD+ +KTPCGFCF +
Sbjct: 37 QEPQVDPLANATTLYVGNLSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTPCGFCFVEY 96
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
++ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 97 FTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQFGRGKSGGQVRDEYREDFD 151
>gi|343426290|emb|CBQ69821.1| probable nuclear cap binding protein subunit 2 [Sporisorium
reilianum SRZ2]
Length = 260
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 98/132 (74%), Gaps = 6/132 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR------AGEIKKIIM 97
S+YRD R + E + AL + T+Y+GN+SFYTTEEQIYE+F R G IK+IIM
Sbjct: 12 SSYRDSRSSQNKHEQQAALRQTATLYLGNLSFYTTEEQIYEVFGRVASVSSGGGIKRIIM 71
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+N+KTPCGF F FY+ + D ++Y+SGT LD+R IR D D G+++GRQ+GRGRSG
Sbjct: 72 GLDRNTKTPCGFAFVEFYTHAEAVDCMRYVSGTKLDERVIRCDLDPGYKEGRQYGRGRSG 131
Query: 158 GQVRDEYRTDYD 169
GQVRDEYR +YD
Sbjct: 132 GQVRDEYRQEYD 143
>gi|390598028|gb|EIN07427.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 227
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 103/144 (71%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + +++ E L STT+YVGN+SFYTTEEQIYELFS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARLDRQKQNELLSKSTTLYVGNLSFYTTEEQIYELFSKCASL 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G +K+IIMGLD+N++TPCGFCF FY+ + +YISG+ LD+R IR D D G++
Sbjct: 61 EDGGGVKRIIMGLDRNTRTPCGFCFVEFYTHAEALATCRYISGSKLDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
DGRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 DGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|402225704|gb|EJU05765.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 218
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 100/143 (69%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D R + E L S T+Y+GN+SFYTTEEQIYELFS+
Sbjct: 1 MAHIVTPLDRPSTYKDSRSNIERSHQAEMLSKSCTLYIGNLSFYTTEEQIYELFSKCANP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G +K+IIMGLD+N KTPCGFCF FY+ + ++YISGT LD+R IR D D G+Q
Sbjct: 61 EDGGGLKRIIMGLDRNQKTPCGFCFVEFYTHAEALACMRYISGTKLDERIIRCDLDLGYQ 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRG+SGGQVRDE+RTDYD
Sbjct: 121 EGRQFGRGKSGGQVRDEHRTDYD 143
>gi|425766493|gb|EKV05102.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum Pd1]
gi|425775339|gb|EKV13617.1| Small subunit of nuclear cap-binding protein complex [Penicillium
digitatum PHI26]
Length = 197
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 105/152 (69%), Gaps = 19/152 (12%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
K++R+ RD P QE+ ++ L +TT+YVGN+SFYTTEEQI+ELF++ GE+K+++M
Sbjct: 22 KNKRRRFNDRDEEEPQQQEKADDKLKNATTLYVGNLSFYTTEEQIHELFAKCGEVKRLVM 81
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG----- 152
GLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+G
Sbjct: 82 GLDRFNKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQFGYEVIT 141
Query: 153 --------------RGRSGGQVRDEYRTDYDP 170
RG+SGGQVRDEYR +YDP
Sbjct: 142 NGGYGQLVTDFLCRRGKSGGQVRDEYREEYDP 173
>gi|392595729|gb|EIW85052.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 226
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 104/145 (71%), Gaps = 7/145 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLA-STTVYVGNMSFYTTEEQIYELFSR--- 88
MA + + + S Y+D + ++ LL STT+Y+GN+SFYTTEEQIYELFS+
Sbjct: 1 MAHVVQRMDQPSNYKDSQNRSMDRSTQQDLLTKSTTLYIGNLSFYTTEEQIYELFSKCAS 60
Query: 89 ---AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGF 145
G IK+IIMGLD+N++TPCGFCF +Y+ + ++KY+SGT LD+R IR D D G+
Sbjct: 61 PEDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALASLKYVSGTKLDERIIRCDLDLGY 120
Query: 146 QDGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRGRSGGQVRDE+R DYDP
Sbjct: 121 AEGRQFGRGRSGGQVRDEHRQDYDP 145
>gi|302692632|ref|XP_003035995.1| hypothetical protein SCHCODRAFT_81360 [Schizophyllum commune H4-8]
gi|300109691|gb|EFJ01093.1| hypothetical protein SCHCODRAFT_81360 [Schizophyllum commune H4-8]
Length = 218
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/144 (54%), Positives = 105/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + +++ E L S+T+YVGN+SFYTTEEQIYELFS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARFDRQKQNELLEKSSTLYVGNLSFYTTEEQIYELFSKCARP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + +++YISGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHSEALASMRYISGTKLDERIIRCDLDLGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDEYR DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEYRQDYDP 144
>gi|296423836|ref|XP_002841458.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637698|emb|CAZ85649.1| unnamed protein product [Tuber melanosporum]
Length = 156
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 92/110 (83%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L ++T+YVGN+SFYTTEEQI+ELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D
Sbjct: 30 DPLKDASTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRFTKTPCGFCFVEYYTHKD 89
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
T DA+KYI GT LD+R IR D D GF++GRQ+GRG +GGQVRD YR DYD
Sbjct: 90 TLDAMKYIGGTKLDERIIRTDLDPGFKEGRQYGRGPTGGQVRDYYRDDYD 139
>gi|388857120|emb|CCF49335.1| probable nuclear cap binding protein subunit 2 [Ustilago hordei]
Length = 269
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 102/143 (71%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
M+ + + S+YRD R ++ E L A++T+Y+GN+SFYTTEEQIYE+F R
Sbjct: 1 MSHILEPLDAPSSYRDSRSAASKAEQHAQLRATSTLYLGNLSFYTTEEQIYEVFGRVASL 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+ +KTPCGF F FY+ + D ++Y+SGT LD+R IR D D G++
Sbjct: 61 STGGGIKRIIMGLDRYAKTPCGFAFVEFYTHAEAVDCMRYVSGTKLDERVIRCDLDPGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRGRSGGQVRDEYR +YD
Sbjct: 121 EGRQYGRGRSGGQVRDEYRQEYD 143
>gi|449018759|dbj|BAM82161.1| similar to nuclear cap-binding protein; CBP20 [Cyanidioschyzon
merolae strain 10D]
Length = 143
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 33 MASLFKDQ-RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
MA L +++ +S YRDR++ GT E+ EE LL + TVYVGN+S YTTEEQIY++F AGE
Sbjct: 1 MADLVRERLAPVSTYRDRQYVGTYEQREEQLLKTQTVYVGNLSVYTTEEQIYQVFGMAGE 60
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+++MGLD+ TPCGFCF F SRE E AV+ ++ + LDD+ I+VDFD GFQ+GRQW
Sbjct: 61 VKRVVMGLDRFKLTPCGFCFVEFMSREGAEYAVELLNRSTLDDQIIKVDFDVGFQEGRQW 120
Query: 152 GRGRSGGQ 159
GRG SGGQ
Sbjct: 121 GRGISGGQ 128
>gi|392558511|gb|EIW51698.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 228
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 103/144 (71%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + ++ + L S+T+YVGN+SFYTTEEQIYELFS+
Sbjct: 1 MAHIITPLDQPSNYKDSQSRVDRQTQNDLLAKSSTLYVGNLSFYTTEEQIYELFSKCTTP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + ++YISGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALACLRYISGTKLDERIIRCDIDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
DGRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 DGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|213403115|ref|XP_002172330.1| nuclear cap-binding protein subunit 2 [Schizosaccharomyces
japonicus yFS275]
gi|212000377|gb|EEB06037.1| nuclear cap-binding protein subunit 2 [Schizosaccharomyces
japonicus yFS275]
Length = 181
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 90/111 (81%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E + S VYVGN+SFYTTE+QIY LFS+ GEIK+IIMG+D+ +KTPCGFCF +Y+ ED
Sbjct: 26 EKVKESCCVYVGNLSFYTTEDQIYALFSKCGEIKRIIMGIDRFTKTPCGFCFVEYYTHED 85
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
D++KY+SGT LD+R IR D D G+++GRQ+GRG SGGQVRDE R ++DP
Sbjct: 86 ALDSLKYVSGTALDERIIRADLDPGYEEGRQYGRGASGGQVRDEIREEFDP 136
>gi|336367021|gb|EGN95366.1| hypothetical protein SERLA73DRAFT_186286 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379746|gb|EGO20900.1| hypothetical protein SERLADRAFT_475254 [Serpula lacrymans var.
lacrymans S7.9]
Length = 225
Score = 156 bits (394), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 105/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + + S Y+D + + + E L STT+Y+GN+SFYTTEEQIYELF++
Sbjct: 1 MAHVVQALDQPSNYKDSQARVDRSKQNELLSRSTTLYIGNLSFYTTEEQIYELFTKCASP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + +++Y+SGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALASMRYVSGTKLDERIIRCDLDLGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|170094038|ref|XP_001878240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646694|gb|EDR10939.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 228
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 104/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + + + E L STT+Y+GN+SFYTTEEQIYELF++
Sbjct: 1 MAHVVSSLDQPSNYKDSQTRVDRMKQNEMLSKSTTLYIGNLSFYTTEEQIYELFTKCASP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + +++Y+SGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALASMRYVSGTKLDERIIRCDLDLGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|328853553|gb|EGG02691.1| hypothetical protein MELLADRAFT_38424 [Melampsora larici-populina
98AG31]
Length = 209
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 90/113 (79%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
E + L S+TVYVGN+SF+TTEEQI+ELFS+ IK+IIMGLD+NSKTPCGFCF +Y
Sbjct: 35 EQQSELSKSSTVYVGNLSFFTTEEQIFELFSKIAPIKRIIMGLDRNSKTPCGFCFVEYYE 94
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+ ++YISGT LD+R IR D D G++DGRQ+GRG+SGGQVRDEYR DYD
Sbjct: 95 PIEALGCLRYISGTKLDERIIRADLDPGYKDGRQYGRGKSGGQVRDEYREDYD 147
>gi|403415700|emb|CCM02400.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 104/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + +++ E L S+T+Y+GN+SFYTTEEQIYE+FS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARLDRQKQNEMLARSSTLYIGNLSFYTTEEQIYEIFSKCTSP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + ++YISGT LD+R IR D D G++
Sbjct: 61 EEGGGIKRIIMGLDRNTRTPCGFCFVEYYTHSEALACLRYISGTKLDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|296812787|ref|XP_002846731.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS 113480]
gi|238841987|gb|EEQ31649.1| nuclear cap binding protein subunit 2 [Arthroderma otae CBS 113480]
Length = 178
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 105/144 (72%), Gaps = 11/144 (7%)
Query: 38 KDQRKLSAYR--DRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
K++R+ S + DR Q +F+ +L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 22 KNKRRKSYHDRGDREEDKIQGDFDVSLKEATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 81
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG--- 152
+MGLD+ KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+G
Sbjct: 82 VMGLDRFQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYGDRA 141
Query: 153 ------RGRSGGQVRDEYRTDYDP 170
RG+SGGQVRDE+R ++DP
Sbjct: 142 DQAFIRRGKSGGQVRDEFRDEFDP 165
>gi|449547414|gb|EMD38382.1| hypothetical protein CERSUDRAFT_113542 [Ceriporiopsis subvermispora
B]
Length = 228
Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 104/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + + + E L STT+YVGN+SFYTTEEQIYE+FS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARIDRTKQNEILTKSTTLYVGNLSFYTTEEQIYEVFSKCTNP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N++TPCGFCF +Y+ + +++Y+SGT +D+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALASLRYVSGTKVDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRADYDP 144
>gi|393216904|gb|EJD02394.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 223
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 104/143 (72%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA--- 89
MA + + S Y+D + +++ + L STT+YVGN+SFYTTEEQIYELFS+A
Sbjct: 1 MAHVVPSLDQPSNYKDSQSKVDRQKQNDLLSKSTTLYVGNLSFYTTEEQIYELFSKAASP 60
Query: 90 ---GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G +K+IIMGLD+N++TPCGFCF +YS + ++Y++GT LD+R IR D D G++
Sbjct: 61 EEGGGVKRIIMGLDRNTRTPCGFCFVEYYSHAEALACMRYVNGTKLDERVIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRG+SGGQVRDE+R DYD
Sbjct: 121 EGRQFGRGKSGGQVRDEHRMDYD 143
>gi|389748735|gb|EIM89912.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 226
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 104/144 (72%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA++ K S Y+D + + + + L STT+YVGN+SFYTTEEQI+++FS+
Sbjct: 1 MANVVTSLDKPSNYKDSQARYDRRQQNDMLSQSTTLYVGNLSFYTTEEQIHDIFSKCANP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G +K+IIMGLD+N++TPCGFCF +Y+ + ++YISGT LD+R IR D D G++
Sbjct: 61 EDGGGVKRIIMGLDRNTRTPCGFCFVEYYTNAEALATMRYISGTKLDERIIRCDLDLGYR 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
DGRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 DGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|393245473|gb|EJD52983.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 218
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 101/143 (70%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + ++ + L STT+YVGN+SFYTTEEQIYELFSR
Sbjct: 1 MAHIVQPLDSPSGYKDSQHRLDRQRQLDQLSRSTTLYVGNLSFYTTEEQIYELFSRCTNP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N+KTPCGFCF +Y+ + ++Y+SGT LD+R +R D D G+
Sbjct: 61 EEGGGIKRIIMGLDRNTKTPCGFCFVEYYTHAEALACMRYVSGTKLDERIVRCDLDLGYA 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
DGRQ+GRG+SGGQVRDE+R DYD
Sbjct: 121 DGRQFGRGKSGGQVRDEHRQDYD 143
>gi|71021555|ref|XP_761008.1| hypothetical protein UM04861.1 [Ustilago maydis 521]
gi|46100928|gb|EAK86161.1| hypothetical protein UM04861.1 [Ustilago maydis 521]
Length = 211
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 106/143 (74%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
M+ + + S+YRD R +++E ++AL ++T+Y+GN+SFYTTEEQIYE+F R
Sbjct: 1 MSHILEPLDAPSSYRDSRSQSSRQEQQQALRQTSTLYLGNLSFYTTEEQIYEVFGRVSSV 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N+KTPCGF F FY+ + D ++Y+SG+ +D+R IR D D G++
Sbjct: 61 STGGGIKRIIMGLDRNTKTPCGFAFVEFYTHAEAVDCMRYVSGSKVDERVIRCDLDPGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
DGRQ+GRGRSGGQVRDEYR +YD
Sbjct: 121 DGRQYGRGRSGGQVRDEYRQEYD 143
>gi|19113206|ref|NP_596414.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74698255|sp|Q9P383.1|NCBP2_SCHPO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|9453827|emb|CAB99394.1| nuclear cap-binding complex small subunit (predicted)
[Schizosaccharomyces pombe]
Length = 182
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S Y RRF + A+ S VYVGN+SFYTTEEQIY LFS+ GEI++IIMG+D+
Sbjct: 10 VSPYLIRRFKNDLRALD-AVKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRF 68
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
+KTPCGFCF ++ +D D++KYIS T LD+R IR D D G+++GRQ+GRG SGGQVRD
Sbjct: 69 TKTPCGFCFVEYFENQDALDSLKYISRTSLDERIIRADLDHGYEEGRQYGRGASGGQVRD 128
Query: 163 EYRTDYDP 170
E R ++DP
Sbjct: 129 EMREEFDP 136
>gi|255719652|ref|XP_002556106.1| KLTH0H05214p [Lachancea thermotolerans]
gi|238942072|emb|CAR30244.1| KLTH0H05214p [Lachancea thermotolerans CBS 6340]
Length = 200
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 94/121 (77%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P E+ ++ S T+YVGN+SFYT+EEQIYELFS++G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLEDLRRSM-RSATIYVGNLSFYTSEEQIYELFSKSGVIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ + E+ DAVKY+SGT LDDR I +D D GF+DGRQ+GRG+SGGQV DE R ++
Sbjct: 89 FCFVIYNTPEEALDAVKYLSGTKLDDRNISLDLDPGFEDGRQFGRGKSGGQVSDELRFEF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|328766429|gb|EGF76483.1| hypothetical protein BATDEDRAFT_14710, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 156
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 89/108 (82%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
L STT+Y+GN+SF+TTEEQIYELFS+ GEIK+IIMGLD+ KTPCGF F ++ R+D
Sbjct: 1 LEKSTTLYIGNLSFFTTEEQIYELFSKCGEIKRIIMGLDRIKKTPCGFSFVEYHHRQDAL 60
Query: 122 DAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D + +I+GT LD+R IR+D D GF +GRQ+GRGRSGGQVRD++R DYD
Sbjct: 61 DCMSFINGTKLDERLIRIDIDPGFVNGRQYGRGRSGGQVRDDHREDYD 108
>gi|388580502|gb|EIM20816.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 175
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 101/141 (71%), Gaps = 4/141 (2%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE- 91
M+ + + S Y+D R E+ E L STT+Y GN+SFYTTEEQIYELF+R
Sbjct: 1 MSDVIQPLDGPSTYKDTRSRIDPEKQREMLERSTTLYCGNLSFYTTEEQIYELFARVASG 60
Query: 92 --IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFD-WGFQDG 148
IK+IIMGLD+N+K PCGF F +YS ++ +A++YI+GT LD+R IR D D G++DG
Sbjct: 61 QGIKRIIMGLDRNTKHPCGFAFVEYYSHQEAVEALRYINGTKLDERVIRCDLDAQGYKDG 120
Query: 149 RQWGRGRSGGQVRDEYRTDYD 169
RQ+GRGRSGGQVRDEYR +YD
Sbjct: 121 RQFGRGRSGGQVRDEYRQEYD 141
>gi|444731186|gb|ELW71548.1| Nuclear cap-binding protein subunit 2 [Tupaia chinensis]
Length = 134
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 90/119 (75%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS +R+R F G EE E+ L S +YVGN+SFYTTEEQIYEL S++G+IKKIIM LDK
Sbjct: 16 ELSQFRNRHFRGDNEEQEKLLKESCMLYVGNLSFYTTEEQIYELLSKSGDIKKIIMDLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
K CGFCF +YSR D E+A++YI+GT LDDR I D+D GF++GRQ G GR GGQV
Sbjct: 76 MKKIACGFCFVEYYSRADAENAMRYINGTRLDDRIIHTDWDAGFKEGRQDGHGRCGGQV 134
>gi|413923014|gb|AFW62946.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 92
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/81 (88%), Positives = 75/81 (92%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E ALLASTT+Y+GNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEAALLASTTLYIGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFAL 113
KKIIMGLDKNSKTPCGFCF L
Sbjct: 61 KKIIMGLDKNSKTPCGFCFVL 81
>gi|426200543|gb|EKV50467.1| hypothetical protein AGABI2DRAFT_190786 [Agaricus bisporus var.
bisporus H97]
Length = 227
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 102/144 (70%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + + + E L S+T+Y+GN+SFYTTEEQI+ELFS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARVDRSKQAELLGKSSTLYIGNLSFYTTEEQIFELFSKCANA 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLDKN++TPCGFCF +Y+ + +++ SGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDKNTRTPCGFCFVEYYTHAEALACMRFASGTKLDERIIRCDLDLGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|409082675|gb|EKM83033.1| hypothetical protein AGABI1DRAFT_111556 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 227
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 102/144 (70%), Gaps = 6/144 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + + S Y+D + + + E L S+T+Y+GN+SFYTTEEQI+ELFS+
Sbjct: 1 MAHVVTPLDQPSNYKDSQARVDRSKQAELLGKSSTLYIGNLSFYTTEEQIFELFSKCANA 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLDKN++TPCGFCF +Y+ + +++ SGT LD+R IR D D G++
Sbjct: 61 EDGGGIKRIIMGLDKNTRTPCGFCFVEYYTHAEALACMRFASGTKLDERIIRCDLDLGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYDP 170
+GRQ+GRG+SGGQVRDE+R DYDP
Sbjct: 121 EGRQFGRGKSGGQVRDEHRQDYDP 144
>gi|342879103|gb|EGU80377.1| hypothetical protein FOXB_09125 [Fusarium oxysporum Fo5176]
Length = 186
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 92/123 (74%), Gaps = 13/123 (10%)
Query: 60 EALLASTTVYVGNM-------------SFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ L +TT+YVGN+ SFYTTEEQ+YELF++ GEIK+++MGLD+ +KTP
Sbjct: 42 DPLANATTLYVGNLDQLHKADFHRANRSFYTTEEQVYELFAKCGEIKRLVMGLDRFNKTP 101
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR
Sbjct: 102 CGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQFGRGKSGGQVRDEYRE 161
Query: 167 DYD 169
D+D
Sbjct: 162 DFD 164
>gi|440900334|gb|ELR51494.1| Nuclear cap-binding protein subunit 2, partial [Bos grunniens
mutus]
Length = 153
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 98/130 (75%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS Y D +F G +E E L+ S+T+YVGN+SFYTT+EQIYELFSR G+I+ + MGLDK
Sbjct: 14 ELSEYWDHKFSGDNDEQERLLMESSTLYVGNLSFYTTKEQIYELFSRCGDIENVYMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
K CGFCF +++R + E+A+++++GT LDD I D+D GF++GRQ+GRG+SGGQ+
Sbjct: 74 IKKMGCGFCFVEYFNRAEAENAMQFLNGTSLDDHIICTDWDLGFREGRQYGRGQSGGQLG 133
Query: 162 DEYRTDYDPD 171
D + D++ D
Sbjct: 134 DVFHEDFNVD 143
>gi|321257087|ref|XP_003193465.1| 20 kDa nuclear cap binding protein (ncbp) [Cryptococcus gattii
WM276]
gi|317459935|gb|ADV21678.1| 20 kDa nuclear cap binding protein (ncbp), putative [Cryptococcus
gattii WM276]
Length = 226
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 99/143 (69%), Gaps = 6/143 (4%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR---- 88
MA + S+YRD R +E L S+T+Y+GN+SFYTTE Q+Y+LFS
Sbjct: 1 MAQVVPSLDHPSSYRDSRSEIDRETERRLLAQSSTLYIGNLSFYTTETQMYQLFSTCAKP 60
Query: 89 --AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
G IK+IIMGLD+N+KTPCGF F ++ E+ D ++YISGT LD+R IR D D G++
Sbjct: 61 EIGGGIKRIIMGLDRNTKTPCGFAFVEYFLHEEAVDCMRYISGTKLDERVIRCDLDPGYK 120
Query: 147 DGRQWGRGRSGGQVRDEYRTDYD 169
+GRQ+GRGRSGGQVRDE+R +YD
Sbjct: 121 EGRQFGRGRSGGQVRDEFRQEYD 143
>gi|410074847|ref|XP_003955006.1| hypothetical protein KAFR_0A04360 [Kazachstania africana CBS 2517]
gi|372461588|emb|CCF55871.1| hypothetical protein KAFR_0A04360 [Kazachstania africana CBS 2517]
Length = 208
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ RR P +E A L S+T+YVGN+SFYT+EEQIYELFS+ G IK+I+MGLD+ TP
Sbjct: 29 KARRNPNGLQELR-ASLVSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIVMGLDRFKFTP 87
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF ++ ++ +AVKY+S T LDD+ I +D D GF+DGRQ+GRGRSGGQV DE +
Sbjct: 88 CGFCFVIYNEPKEALNAVKYLSNTKLDDKKITIDLDPGFEDGRQFGRGRSGGQVSDELKF 147
Query: 167 DYD 169
++D
Sbjct: 148 EFD 150
>gi|402578571|gb|EJW72525.1| nuclear cap-binding protein subunit 2, partial [Wuchereria
bancrofti]
Length = 107
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 87/107 (81%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G+ E E+ LL S T+YVGN+S+YTTEEQ YELFSRAG+IK+IIMG+D+ KTPCGFCF
Sbjct: 1 GSLREQEKLLLTSKTLYVGNLSYYTTEEQTYELFSRAGDIKRIIMGIDRFKKTPCGFCFV 60
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
+Y RED EDA++ I+GT LDDR IR D+D GF +GRQ+GRG+ GGQ
Sbjct: 61 EYYLREDAEDAMRCINGTRLDDRIIRTDWDAGFVEGRQYGRGKHGGQ 107
>gi|156848818|ref|XP_001647290.1| hypothetical protein Kpol_1002p79 [Vanderwaltozyma polyspora DSM
70294]
gi|156117975|gb|EDO19432.1| hypothetical protein Kpol_1002p79 [Vanderwaltozyma polyspora DSM
70294]
Length = 209
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 86/107 (80%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCGFCF ++ + ++ +
Sbjct: 44 MKSATIYVGNLSFYTSEEQIYELFSKCGSIKRIIMGLDRFKYTPCGFCFIIYNTPDEALN 103
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
AVKY+S T LDDR I +D D GF+DGRQ+GRG+SGGQV DE R +YD
Sbjct: 104 AVKYLSDTKLDDRTITIDLDPGFEDGRQFGRGKSGGQVSDELRFEYD 150
>gi|367015406|ref|XP_003682202.1| hypothetical protein TDEL_0F01800 [Torulaspora delbrueckii]
gi|359749864|emb|CCE92991.1| hypothetical protein TDEL_0F01800 [Torulaspora delbrueckii]
Length = 219
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
R+ P +E +++ S TVYVGN+SFYT+EEQIYELFS+ G IK+I+MGLD+ TPCG
Sbjct: 30 RKNPNGLDELRQSM-KSATVYVGNLSFYTSEEQIYELFSKCGTIKRIVMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +AVKY+S T LDDR + +D D GF+DGRQ+GRG+SGGQV DE R +Y
Sbjct: 89 FCFVIYNKADEALNAVKYLSDTKLDDRNVTIDIDPGFEDGRQFGRGKSGGQVSDELRFEY 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|359081817|ref|XP_003588184.1| PREDICTED: LOW QUALITY PROTEIN: nuclear cap-binding protein subunit
2-like [Bos taurus]
Length = 220
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 99/130 (76%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS Y D++F G +E E L+ S+T+YVGN+SFYTT+EQIYELFSR G+I+ + MGLDK
Sbjct: 59 ELSEYWDQKFSGDNDEQERLLMESSTLYVGNLSFYTTKEQIYELFSRCGDIENVYMGLDK 118
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
K CGFCF +++R + E+A+++++GT LDD I D+D GF++GRQ+GRG+SGGQ+
Sbjct: 119 IKKMGCGFCFVEYFNRAEAENAMQFLNGTSLDDHIICTDWDLGFREGRQYGRGQSGGQLG 178
Query: 162 DEYRTDYDPD 171
D + D++ D
Sbjct: 179 DAFHEDFNVD 188
>gi|430812623|emb|CCJ29971.1| unnamed protein product [Pneumocystis jirovecii]
Length = 173
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 80/96 (83%)
Query: 75 FYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDD 134
FYTTEEQIYELFS+ GE+K+IIMGLD+ SKT CGFCF +YS E D +K+I+GT LDD
Sbjct: 34 FYTTEEQIYELFSKCGEVKRIIMGLDRFSKTYCGFCFVEYYSHEHALDCMKFINGTKLDD 93
Query: 135 RPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
R IR D D GF +GRQ+GRGRSGGQVRDEYRT+YDP
Sbjct: 94 RVIRTDIDPGFTEGRQYGRGRSGGQVRDEYRTEYDP 129
>gi|134115853|ref|XP_773409.1| hypothetical protein CNBI2540 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256034|gb|EAL18762.1| hypothetical protein CNBI2540 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 226
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 96/132 (72%), Gaps = 6/132 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR------AGEIKKIIM 97
S+YRD R +E L S+T+Y+GN+SFYTTE Q+Y+LFS G IK+IIM
Sbjct: 12 SSYRDSRSEIDRETERRLLALSSTLYIGNLSFYTTETQMYQLFSTCAKPEIGGGIKRIIM 71
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+N+KTPCGF F ++ E+ D ++YISGT LD+R IR D D G+++GRQ+GRGRSG
Sbjct: 72 GLDRNTKTPCGFAFVEYFLHEEAVDCMRYISGTKLDERVIRCDLDPGYKEGRQFGRGRSG 131
Query: 158 GQVRDEYRTDYD 169
GQVRDE+R +YD
Sbjct: 132 GQVRDEFRQEYD 143
>gi|254586545|ref|XP_002498840.1| ZYRO0G19844p [Zygosaccharomyces rouxii]
gi|238941734|emb|CAR29907.1| ZYRO0G19844p [Zygosaccharomyces rouxii]
Length = 218
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
R+ P EE +++ S TVYVGN+SFYT+EEQIYELFS+ G I++I+MGLD+ TPCG
Sbjct: 30 RKNPNGLEELRQSV-RSGTVYVGNLSFYTSEEQIYELFSKCGTIQRIVMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ E+ +AVKY+ T LDDR I +D D GF+DGRQ+GRG+SGGQV DE R +Y
Sbjct: 89 FCFVIYTKPEEALNAVKYLGDTKLDDRNISIDIDPGFEDGRQFGRGKSGGQVSDELRFEY 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|323331161|gb|EGA72579.1| Cbc2p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|190407783|gb|EDV11048.1| nuclear cap binding complex subunit [Saccharomyces cerevisiae
RM11-1a]
Length = 208
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|449267909|gb|EMC78800.1| Nuclear cap-binding protein subunit 2, partial [Columba livia]
Length = 108
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 90/107 (84%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G+++ E++L S+T+YVGN+SFYTTEEQI ELFS+ G++K+I+MGLDK KTPCGFCF
Sbjct: 2 GSKQLQEKSLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDKIKKTPCGFCFV 61
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
+Y+R D E A+++I+GT LDDR IR D+D GF++GRQ+GRG++GGQ
Sbjct: 62 EYYTRADAEHAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGKTGGQ 108
>gi|6325079|ref|NP_015147.1| Cbc2p [Saccharomyces cerevisiae S288c]
gi|74676483|sp|Q08920.1|NCBP2_YEAST RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|6649544|gb|AAF21454.1|U39665_1 CBP20 homolog [Saccharomyces cerevisiae]
gi|1370375|emb|CAA97885.1| SAE1 [Saccharomyces cerevisiae]
gi|51013349|gb|AAT92968.1| YPL178W [Saccharomyces cerevisiae]
gi|207340672|gb|EDZ68953.1| YPL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274244|gb|EEU09152.1| Cbc2p [Saccharomyces cerevisiae JAY291]
gi|285815364|tpg|DAA11256.1| TPA: Cbc2p [Saccharomyces cerevisiae S288c]
gi|392296259|gb|EIW07362.1| Cbc2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 208
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|151942621|gb|EDN60967.1| nuclear cap binding complex subunit [Saccharomyces cerevisiae
YJM789]
gi|259149978|emb|CAY86781.1| Cbc2p [Saccharomyces cerevisiae EC1118]
gi|323302684|gb|EGA56490.1| Cbc2p [Saccharomyces cerevisiae FostersB]
gi|323306947|gb|EGA60231.1| Cbc2p [Saccharomyces cerevisiae FostersO]
gi|323346135|gb|EGA80425.1| Cbc2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323351960|gb|EGA84499.1| Cbc2p [Saccharomyces cerevisiae VL3]
gi|349581640|dbj|GAA26797.1| K7_Cbc2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 208
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|290973266|ref|XP_002669370.1| predicted protein [Naegleria gruberi]
gi|284082916|gb|EFC36626.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 62/112 (55%), Positives = 85/112 (75%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G +E+FE AL S+T+YV N+SFYT EEQIYELF + GE+K+++MGL++N+ TPCGFCF
Sbjct: 33 GNEEDFERALSQSSTIYVENLSFYTKEEQIYELFEKCGEVKRVVMGLNRNTLTPCGFCFV 92
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEY 164
FY R D E+ VKY G L++R +++ D GF +GRQ+GRG+ GG RD+Y
Sbjct: 93 EFYHRSDAEECVKYCRGCKLNNRALKIAIDTGFVEGRQYGRGKDGGMKRDDY 144
>gi|323335299|gb|EGA76588.1| Cbc2p [Saccharomyces cerevisiae Vin13]
Length = 208
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|116208124|ref|XP_001229871.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183952|gb|EAQ91420.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 164
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 81/98 (82%)
Query: 72 NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTI 131
MSFYTTEEQ+YELFS+ GEIK+++MGLD+ +KTPCGFCF +Y+ +D D +KYI GT
Sbjct: 35 EMSFYTTEEQVYELFSKCGEIKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCMKYIGGTK 94
Query: 132 LDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
LD+R IR D D GF +GRQ+GRG+SGGQVRDEYR D+D
Sbjct: 95 LDERIIRTDLDPGFTEGRQYGRGKSGGQVRDEYREDFD 132
>gi|365762733|gb|EHN04266.1| Cbc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 208
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQLGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|210076238|ref|XP_504544.2| YALI0E29293p [Yarrowia lipolytica]
gi|199426969|emb|CAG80148.2| YALI0E29293p [Yarrowia lipolytica CLIB122]
Length = 170
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 88/114 (77%)
Query: 56 EEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
EE AL +TT+YVGN+SF+TTEEQI+ELF++ ++KKIIMGLD+ KTPCGFCF +Y
Sbjct: 37 EEDLAALDVTTTLYVGNLSFFTTEEQIHELFTKIAKVKKIIMGLDRYQKTPCGFCFVEYY 96
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+D +KY+ T LD+R I +D D GF++GRQ+GRG SGGQVRDE+R DYD
Sbjct: 97 EHDDAVACLKYLHKTKLDERIITIDLDPGFKEGRQFGRGSSGGQVRDEFRQDYD 150
>gi|45198469|ref|NP_985498.1| AFL050Wp [Ashbya gossypii ATCC 10895]
gi|74693047|sp|Q754W7.1|NCBP2_ASHGO RecName: Full=Nuclear cap-binding protein subunit 2; AltName:
Full=20 kDa nuclear cap-binding protein; AltName:
Full=NCBP 20 kDa subunit; Short=CBP20
gi|44984420|gb|AAS53322.1| AFL050Wp [Ashbya gossypii ATCC 10895]
gi|374108727|gb|AEY97633.1| FAFL050Wp [Ashbya gossypii FDAG1]
Length = 218
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ R+ PG EE +++ S T+YVGN+SFYT+EEQ+YELFS+ G I+KIIMGLD+ TP
Sbjct: 28 KARKTPGGLEELRKSM-TSATIYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTP 86
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF ++ + ++ A+KY+S T LDDR I +D D GF++GRQ+GRG++GGQV DE R
Sbjct: 87 CGFCFIIYQTPQEALAALKYLSKTKLDDREITIDLDPGFEEGRQFGRGKNGGQVSDELRF 146
Query: 167 DYD 169
++D
Sbjct: 147 EFD 149
>gi|121698319|ref|XP_001267782.1| small subunit of nuclear cap-binding protein complex [Aspergillus
clavatus NRRL 1]
gi|119395924|gb|EAW06356.1| small subunit of nuclear cap-binding protein complex [Aspergillus
clavatus NRRL 1]
Length = 138
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 82/97 (84%)
Query: 74 SFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILD 133
SFYTTEEQI+ELFS+ GE+K+++MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD
Sbjct: 17 SFYTTEEQIHELFSKCGEVKRLVMGLDRFNKTPCGFCFVEYYTHQDALDCLKYIGGTKLD 76
Query: 134 DRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+R IR D D GF++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 77 ERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDP 113
>gi|336469743|gb|EGO57905.1| hypothetical protein NEUTE1DRAFT_146404 [Neurospora tetrasperma
FGSC 2508]
Length = 187
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 87/114 (76%), Gaps = 7/114 (6%)
Query: 56 EEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
E F++ L +TT+YVGN+ Q+YELFS+ GEIK+++MGLD+ KTPCGFCF +Y
Sbjct: 47 EAFDDPLKDATTLYVGNL-------QVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVEYY 99
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 100 THQDALDCMKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREDYD 153
>gi|365758094|gb|EHM99955.1| Cbc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401842435|gb|EJT44647.1| CBC2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 209
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+Y GN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYAGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|226468430|emb|CAX69892.1| Nuclear cap-binding protein subunit 2 [Schistosoma japonicum]
Length = 144
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 95/138 (68%), Gaps = 19/138 (13%)
Query: 34 ASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIK 93
AS +K S YRDRR + E + L +TT+Y+GN+SFYT EEQI+ELFSRAGEIK
Sbjct: 13 ASFYK-----SPYRDRRNDHSPRELSKCLRETTTLYIGNLSFYTREEQIWELFSRAGEIK 67
Query: 94 KIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
++IMGL + KTPCGFCF + +R+ DDR IR D+D GF++GRQ+GR
Sbjct: 68 RVIMGLHRFDKTPCGFCFVEYCTRD--------------DDRIIRTDWDAGFEEGRQYGR 113
Query: 154 GRSGGQVRDEYRTDYDPD 171
GRSGGQVRDE+R DYD +
Sbjct: 114 GRSGGQVRDEFRKDYDAE 131
>gi|444313691|ref|XP_004177503.1| hypothetical protein TBLA_0A01830 [Tetrapisispora blattae CBS 6284]
gi|387510542|emb|CCH57984.1| hypothetical protein TBLA_0A01830 [Tetrapisispora blattae CBS 6284]
Length = 228
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 85/107 (79%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCGFCF ++ + +
Sbjct: 44 MRSSTIYVGNLSFYTSEEQIYELFSKCGVIKRIIMGLDRFKFTPCGFCFVIYNKPREALN 103
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
AVKY++ T LDDR I +D D GF+DGRQ+GRG+SGGQV DE R +YD
Sbjct: 104 AVKYLTETKLDDRNISIDLDPGFEDGRQFGRGKSGGQVSDELRFEYD 150
>gi|367005466|ref|XP_003687465.1| hypothetical protein TPHA_0J02110 [Tetrapisispora phaffii CBS 4417]
gi|357525769|emb|CCE65031.1| hypothetical protein TPHA_0J02110 [Tetrapisispora phaffii CBS 4417]
Length = 259
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 84/105 (80%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCGFCF +F + E+ +AV
Sbjct: 46 SGTIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCGFCFVIFNTPEEALNAV 105
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
KY+ T LDDR I +D D GF+DGRQ+GRG+SGGQV DE + ++D
Sbjct: 106 KYLGDTKLDDRVITIDLDPGFEDGRQFGRGKSGGQVSDELKFEFD 150
>gi|401623287|gb|EJS41391.1| cbc2p [Saccharomyces arboricola H-6]
Length = 209
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E +++ S+T+Y GN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRDSM-KSSTIYAGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|50304093|ref|XP_451996.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641128|emb|CAH02389.1| KLLA0B10472p [Kluyveromyces lactis]
Length = 198
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 89/121 (73%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P + + + S TVYVGN+SFYT+EEQIYELFS+ G IKKIIMGLD+ TPCG
Sbjct: 30 RRDPDSGLQQLRKSMKSCTVYVGNLSFYTSEEQIYELFSKCGTIKKIIMGLDRFKFTPCG 89
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF +F ED +++KY+ T LDDR I +D D GF++GRQ+GRG++GGQV DE R ++
Sbjct: 90 FCFIIFDKMEDALNSIKYLGDTKLDDRHITIDLDPGFEEGRQFGRGKNGGQVSDEMRFEF 149
Query: 169 D 169
D
Sbjct: 150 D 150
>gi|50285625|ref|XP_445241.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524545|emb|CAG58147.1| unnamed protein product [Candida glabrata]
Length = 236
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P + ++L S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLNDLRQSL-KSSTIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ + ++ +AVKY+ T LDD+ I +D D GF+DGRQ+GRG+SGGQV DE R ++
Sbjct: 89 FCFIIYNTPQEALNAVKYLGDTKLDDKSITIDLDPGFEDGRQFGRGKSGGQVSDELRFEF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|405119689|gb|AFR94461.1| 20 kda nuclear cap binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 210
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 7/120 (5%)
Query: 57 EFEEALLA-STTVYVGNMSFYTTEEQIYELFSR------AGEIKKIIMGLDKNSKTPCGF 109
E E LLA S+T+Y+GN+SFYTTE Q+Y+LFS G IK+IIMGLD+N+KTPCGF
Sbjct: 8 ETERRLLAQSSTLYIGNLSFYTTETQMYQLFSTCAKPEIGGGIKRIIMGLDRNTKTPCGF 67
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
F ++ E+ D ++YISGT LD+R IR D D G+++GRQ+GRGRSGGQVRDE+R +YD
Sbjct: 68 AFVEYFLHEEAVDCMRYISGTKLDERVIRCDLDPGYKEGRQFGRGRSGGQVRDEFRQEYD 127
>gi|406602546|emb|CCH45862.1| Nuclear cap-binding protein subunit 2 [Wickerhamomyces ciferrii]
Length = 251
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 82/104 (78%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+YVGN+SFYTTEEQIYELFS+ G IK+IIMGLD+ + TPCGFCF ++ D +AV
Sbjct: 45 SATIYVGNLSFYTTEEQIYELFSKVGPIKQIIMGLDRFNYTPCGFCFVVYKKPSDAINAV 104
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
KY+ T L+DR + +D D GFQDGRQ+GRG SGGQV+DE + +Y
Sbjct: 105 KYLGETKLEDRLVTIDLDPGFQDGRQFGRGASGGQVKDEMKFEY 148
>gi|365990227|ref|XP_003671943.1| hypothetical protein NDAI_0I01310 [Naumovozyma dairenensis CBS 421]
gi|343770717|emb|CCD26700.1| hypothetical protein NDAI_0I01310 [Naumovozyma dairenensis CBS 421]
Length = 277
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 92/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
R+ P +E ++L S T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RKNPNGLQELRQSL-KSCTIYVGNLSFYTSEEQIYELFSKCGFIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ S + +A+KY+S T LDD+ I +D D GF+DGRQ+GRG+SGGQV DE R ++
Sbjct: 89 FCFIIYSSPNEALNALKYLSDTKLDDKHITIDLDPGFEDGRQFGRGKSGGQVSDELRFEF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>gi|392577307|gb|EIW70436.1| hypothetical protein TREMEDRAFT_18663, partial [Tremella
mesenterica DSM 1558]
Length = 206
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 94/132 (71%), Gaps = 6/132 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFS------RAGEIKKIIM 97
S+YRD R +E L STT+YVGN+SFYTTE Q+YE+FS G +K+IIM
Sbjct: 12 SSYRDNRSELDRETERRLLARSTTLYVGNLSFYTTETQMYEVFSACARPEEGGGVKRIIM 71
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD++ KTPCGF F +Y + +++YISGT +D+R IR D D G+++GRQ+GRGRSG
Sbjct: 72 GLDRHQKTPCGFAFVEYYLHSEALASLRYISGTKVDERIIRCDLDPGYKEGRQFGRGRSG 131
Query: 158 GQVRDEYRTDYD 169
GQVRDE+R +YD
Sbjct: 132 GQVRDEFRQEYD 143
>gi|158513766|sp|A6PVI3.1|NCB2L_HUMAN RecName: Full=Nuclear cap-binding protein subunit 2-like
Length = 153
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD +F G + + E+ L S+T+ +GN+SFYTTEE+I+ELFSR+ +I+ I MGLDK
Sbjct: 15 ELSCYRDHQFSGRKFQQEKLLKESSTLNMGNLSFYTTEEKIHELFSRS-DIRNIFMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF ++R D E+A+++++GT LD+ I D+D GF++G+Q+GRG+SGGQVR
Sbjct: 74 IKKTACGFCFVECHNRADAENAMRFLTGTCLDEWIICTDWDVGFREGQQYGRGKSGGQVR 133
Query: 162 DEYRTDY 168
DE+R D+
Sbjct: 134 DEFREDF 140
>gi|363749183|ref|XP_003644809.1| hypothetical protein Ecym_2246 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888442|gb|AET37992.1| Hypothetical protein Ecym_2246 [Eremothecium cymbalariae
DBVPG#7215]
Length = 236
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ R+ P EE ++++ S T+YVGN+SFYT+EEQ+YELF++ G I++IIMGLD+ TP
Sbjct: 28 KARKTPSGLEELRKSMV-SATIYVGNLSFYTSEEQLYELFNKCGTIERIIMGLDRFKFTP 86
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF ++ + ++ A+KY+S T LDDR I +D D GF++GRQ+GRG++GGQV DE R
Sbjct: 87 CGFCFIIYQTPQEALAALKYLSKTKLDDREITIDLDPGFEEGRQFGRGKNGGQVSDELRF 146
Query: 167 DYD 169
+YD
Sbjct: 147 EYD 149
>gi|325188042|emb|CCA22585.1| elicitinlike protein putative [Albugo laibachii Nc14]
Length = 251
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K+QRK Y DR+ + EE + A+ S+T+Y+GN+SFYT+E Q+ ELFSR G IK++
Sbjct: 16 LPKNQRK---YWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRV 72
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
IMGLD+ KTPCGFCF +YS + ++SGT LD+R IR + D GF GRQ+GRG
Sbjct: 73 IMGLDRFKKTPCGFCFVEYYSHAEALACSNFLSGTKLDNRVIRCEMDGGFTQGRQFGRGF 132
Query: 156 SGGQVRDEYRT--DYDP 170
SGGQVRD+ R+ +YDP
Sbjct: 133 SGGQVRDDRRSKDEYDP 149
>gi|403216390|emb|CCK70887.1| hypothetical protein KNAG_0F02200 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ R+ P EE + S T+YVGN+SFYT+EEQ+YELFS+ G IK+IIMGLD+ TP
Sbjct: 28 KARKNPDGLEELRRST-KSATIYVGNLSFYTSEEQLYELFSKCGTIKRIIMGLDRFKFTP 86
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGF F ++ + ++ +A+KY+SGT LDD+ I +D D GF+DGRQ+GRG+SGGQV DE R
Sbjct: 87 CGFSFIIYSTPQEALNALKYLSGTKLDDKIITIDLDPGFEDGRQFGRGKSGGQVSDELRF 146
Query: 167 DYD 169
++D
Sbjct: 147 EFD 149
>gi|299115883|emb|CBN75892.1| nuclear cap-binding protein subunit 2 [Ectocarpus siliculosus]
Length = 196
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 88/125 (70%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y DR+ + E ++EAL S+T+YVGN+SFYT E QIY LF + G ++++IMGLD+ K+
Sbjct: 14 YWDRKNWSSLEAYKEALKKSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKS 73
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF + + DT A+ + GT LD+R I+V D GF+ GRQ+GRG SGGQVRDE R
Sbjct: 74 PCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEAR 133
Query: 166 TDYDP 170
DP
Sbjct: 134 ATNDP 138
>gi|402911091|ref|XP_003918176.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Papio
anubis]
Length = 153
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS RD +F G++ + E+ L S+T+ + N+SFYTTEE+I+ELFSR+ +I+ I MGLDK
Sbjct: 15 ELSCCRDHQFSGSKFQQEKLLKESSTMNMRNLSFYTTEEKIHELFSRS-DIRNIFMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF ++R D E+A+++++GT LD+ IR D+D GF++G+Q+GRG+SG QVR
Sbjct: 74 IKKTACGFCFVECHNRADAENAMRFLNGTCLDEWIIRTDWDIGFREGQQYGRGKSGSQVR 133
Query: 162 DEYRTDY 168
DE+R D+
Sbjct: 134 DEFREDF 140
>gi|403371443|gb|EJY85602.1| Nuclear cap-binding protein subunit 2 [Oxytricha trifallax]
Length = 248
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 99/137 (72%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ ASL++D S Y D+R +Q++++E L STT+YVGN+SFYT+E Q+ E F GE
Sbjct: 4 SAASLYQDLDPKSIYFDKRSGLSQDQYKEKLSNSTTLYVGNLSFYTSETQLLEFFQLCGE 63
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+ +IMGL++ K PCGFCF + +R++ A++ ++ +++D R IR+D+D GF+ GRQ+
Sbjct: 64 VVNLIMGLNREKKQPCGFCFVEYATRQEAALAIECLNLSVVDGRQIRIDWDPGFEPGRQY 123
Query: 152 GRGRSGGQVRDEYRTDY 168
GRG+SGGQVRDE + D+
Sbjct: 124 GRGKSGGQVRDELKPDF 140
>gi|194382258|dbj|BAG58884.1| unnamed protein product [Homo sapiens]
Length = 121
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDW 115
>gi|109131846|ref|XP_001091350.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Macaca
mulatta]
gi|355705055|gb|EHH30980.1| Nuclear cap-binding protein subunit 2-like protein [Macaca mulatta]
gi|355757604|gb|EHH61129.1| Nuclear cap-binding protein subunit 2-like protein [Macaca
fascicularis]
Length = 153
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS RD +F G++ + E+ L S+T+ + N+SFYTTEE+I+ELFSR+ +I+ I MGLDK
Sbjct: 15 ELSCCRDHQFSGSKFQQEKLLKESSTMNMRNLSFYTTEEKIHELFSRS-DIRNIFMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF ++R D E+A+++++GT LD+ I D+D GF++G+Q+GRG+SGGQVR
Sbjct: 74 IKKTACGFCFVECHNRADAENAMRFLNGTCLDEWIICTDWDIGFREGQQYGRGKSGGQVR 133
Query: 162 DEYRTDY 168
DE+R D+
Sbjct: 134 DEFREDF 140
>gi|402469520|gb|EJW04342.1| hypothetical protein EDEG_01398 [Edhazardia aedis USNM 41457]
Length = 159
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 93/133 (69%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
+ +K +R+ Y D++F GT EEF+E L STT+YVG + EE I+ELFS G +
Sbjct: 6 LEQFYKPKREPYQYIDKKFQGTDEEFKELLNKSTTLYVGEVCPAIKEECIWELFSLVGPV 65
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
K++IMG+++N + PCGFCF +Y+R+D E+ VK+ISG LD ++ D D G+ +GR+ G
Sbjct: 66 KRVIMGINRNDRRPCGFCFVEYYTRKDAENCVKFISGFRLDGHFLKCDIDHGYCEGRELG 125
Query: 153 RGRSGGQVRDEYR 165
RG SGGQV+DE++
Sbjct: 126 RGESGGQVKDEFK 138
>gi|340369394|ref|XP_003383233.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Amphimedon
queenslandica]
Length = 180
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 101/127 (79%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS YRD + +++++ L+ STT+YVGN+SFYTTEEQIYELFS AG++K++IMGLD++
Sbjct: 7 LSNYRDHKADIDPDDYQQLLVQSTTLYVGNLSFYTTEEQIYELFSMAGDVKRVIMGLDRH 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y + AVKYI+GT LD R +R D+D GF++GRQ+GRGR GGQVRD
Sbjct: 67 KKTPCGFCFVEYYEKSAASIAVKYINGTKLDGRIVRTDWDAGFKEGRQYGRGRRGGQVRD 126
Query: 163 EYRTDYD 169
+YR DYD
Sbjct: 127 DYRNDYD 133
>gi|261190116|ref|XP_002621468.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
gi|239591296|gb|EEQ73877.1| nuclear cap binding protein subunit 2 [Ajellomyces dermatitidis
SLH14081]
Length = 177
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 88/117 (75%), Gaps = 4/117 (3%)
Query: 36 LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
L K++R+ RD G QE+ + L +TT+YVGN+SFYTTEEQI+ELF++ GEIK++
Sbjct: 50 LSKNKRRKFGDRD----GPQEDPVDPLKDATTLYVGNLSFYTTEEQIHELFAKCGEIKRL 105
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GFQ+GRQ+G
Sbjct: 106 VMGLDRFAKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTDLDPGFQEGRQYG 162
>gi|301103105|ref|XP_002900639.1| elicitin-like protein [Phytophthora infestans T30-4]
gi|262101902|gb|EEY59954.1| elicitin-like protein [Phytophthora infestans T30-4]
Length = 355
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y DR+ + E + A+ S+T+YVGN+SF+T+E QIYELFSR G +K++IMGLD+ KT
Sbjct: 140 YWDRKTFSSFAEQQRAMERSSTLYVGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKT 199
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF + + + E +++S T LD+R +R + D GF++GRQ+GRG SGGQVRD+ R
Sbjct: 200 PCGFCFVEYSAHVEAEACSQFLSETKLDNRVVRCEMDGGFREGRQFGRGLSGGQVRDDRR 259
Query: 166 T--DYD 169
+ DYD
Sbjct: 260 SKDDYD 265
>gi|348671723|gb|EGZ11543.1| hypothetical protein PHYSODRAFT_303573 [Phytophthora sojae]
Length = 249
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 87/115 (75%), Gaps = 2/115 (1%)
Query: 57 EFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYS 116
E + A+ S+T+Y+GN+SF+T+E QIYELFSR G +K++IMGLD+ KTPCGFCF + +
Sbjct: 35 EQQRAMARSSTLYIGNLSFFTSEAQIYELFSRVGHVKRVIMGLDRFKKTPCGFCFVEYST 94
Query: 117 REDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT--DYD 169
+ E +++S T LD+R +R + D GF++GRQ+GRG SGGQVRD+ R+ DYD
Sbjct: 95 HAEAEACAQFLSETKLDNRVVRCEMDGGFREGRQFGRGLSGGQVRDDRRSKDDYD 149
>gi|241948801|ref|XP_002417123.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223640461|emb|CAX44713.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 224
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K SAY R+ E E A+ S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+
Sbjct: 17 KPSAYLIRKARHNYGELERAM-TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
N TPCGFCF ++ S + + +A+K++ TILD + I +D D GF++GRQ+GRG+ GGQ
Sbjct: 76 NKLTPCGFCFVIYRSEQGSLNAMKFLQSTILDSQSISIDLDPGFREGRQFGRGKHGGQAS 135
Query: 162 DE 163
E
Sbjct: 136 QE 137
>gi|238879057|gb|EEQ42695.1| hypothetical protein CAWG_00916 [Candida albicans WO-1]
Length = 224
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K SAY R+ E E A+ S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+
Sbjct: 17 KPSAYLIRKARHNYGELERAM-TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
N TPCGFCF ++ + + + +A+K++ TILD + I +D D GF++GRQ+GRG+ GGQ
Sbjct: 76 NKLTPCGFCFVIYRTEQGSLNAMKFLQSTILDSQSISIDLDPGFREGRQFGRGKHGGQAS 135
Query: 162 DE 163
E
Sbjct: 136 QE 137
>gi|68484939|ref|XP_713608.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
gi|68485014|ref|XP_713573.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435078|gb|EAK94468.1| hypothetical protein CaO19.763 [Candida albicans SC5314]
gi|46435114|gb|EAK94503.1| hypothetical protein CaO19.8383 [Candida albicans SC5314]
Length = 224
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K SAY R+ E E A+ S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+
Sbjct: 17 KPSAYLIRKARHNYGELERAM-TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
N TPCGFCF ++ + + + +A+K++ TILD + I +D D GF++GRQ+GRG+ GGQ
Sbjct: 76 NKLTPCGFCFVIYRTEQGSLNAMKFLQSTILDSQSISIDLDPGFREGRQFGRGKHGGQAS 135
Query: 162 DE 163
E
Sbjct: 136 QE 137
>gi|124505443|ref|XP_001351463.1| nuclear cap-binding protein, putative [Plasmodium falciparum 3D7]
gi|23498221|emb|CAD49192.1| nuclear cap-binding protein, putative [Plasmodium falciparum 3D7]
Length = 234
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 91/139 (65%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L+++ K Y DR EE+++ + S TVY+GN+S YTT++QIYE S+AG++
Sbjct: 1 MAHLYEEVYKKRKYFDRALCNDYEEWQDKIRESKTVYIGNLSIYTTQQQIYEHMSKAGDV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ +E AV +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYKKKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGKRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPD 171
RG++G Q RDE YD D
Sbjct: 121 RGKTGVQKRDERNKFYDED 139
>gi|58261140|ref|XP_567980.1| 20 kda nuclear cap binding protein (ncbp) [Cryptococcus neoformans
var. neoformans JEC21]
gi|57230062|gb|AAW46463.1| 20 kda nuclear cap binding protein (ncbp), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 195
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/114 (57%), Positives = 86/114 (75%), Gaps = 9/114 (7%)
Query: 57 EFEEALLA-STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFY 115
E E LLA S+T+Y+GN+SFYTTE Q+Y+ + IIMGLD+N+KTPCGF F ++
Sbjct: 7 ETERRLLALSSTLYIGNLSFYTTETQMYQ--------RGIIMGLDRNTKTPCGFAFVEYF 58
Query: 116 SREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
E+ D ++YISGT LD+R IR D D G+++GRQ+GRGRSGGQVRDE+R +YD
Sbjct: 59 LHEEAVDCMRYISGTKLDERVIRCDLDPGYKEGRQFGRGRSGGQVRDEFRQEYD 112
>gi|255730519|ref|XP_002550184.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132141|gb|EER31699.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 206
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K SAY R+ E E A+ S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+
Sbjct: 17 KPSAYLIRKARHNYGEIERAM-TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
N TPCGFCF ++ + + + +A+K++ T+LD + I +D D GF++GRQ+GRGR GGQ
Sbjct: 76 NKLTPCGFCFVIYRTEQGSLNAMKFLQSTVLDSQDITIDLDPGFREGRQFGRGRHGGQAG 135
Query: 162 DE 163
E
Sbjct: 136 AE 137
>gi|229367868|gb|ACQ58914.1| Nuclear cap-binding protein subunit 2 [Anoplopoma fimbria]
Length = 123
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 86/108 (79%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + + E+ L S T+YVGN+SFY+TE+Q++E+FS++G++K+I++GLDK
Sbjct: 16 VSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYSTEDQVHEIFSKSGDVKRIVIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
KT CGFCF +Y+R E+A+++I+GT LDDR IR D+D GF++GRQ
Sbjct: 76 KKTACGFCFVEYYTRTGAENAMRFINGTRLDDRIIRTDWDAGFKEGRQ 123
>gi|15988386|pdb|1H6K|Z Chain Z, Nuclear Cap Binding Complex
gi|253722193|pdb|1H6K|X Chain X, Nuclear Cap Binding Complex
gi|253722194|pdb|1H6K|Y Chain Y, Nuclear Cap Binding Complex
Length = 98
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 48 DRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPC 107
D+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK KT C
Sbjct: 1 DQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK-MKTAC 59
Query: 108 GFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
GFCF +YSR D E+A++YI+GT LDDR IR D+D GF+
Sbjct: 60 GFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFK 98
>gi|70946005|ref|XP_742761.1| nuclear cap-binding protein [Plasmodium chabaudi chabaudi]
gi|56521923|emb|CAH80634.1| nuclear cap-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 241
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 9/175 (5%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+++ K Y DR E++ + S TVY+GN+S YTTE+QIYE S+AGE+
Sbjct: 1 MSHLYEEVYKKRKYYDRALCNDYEDWLNKIQYSKTVYIGNLSIYTTEQQIYEHMSKAGEV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ +E +V +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYKRKEGATQSVNFLNNSILDGRIIRVDEDLGIIGKRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPDILLLTLLNFMCWSDVV-------NISFHRTEAFNSF 200
RG++G Q RDE +D D + +L+ + +V N S+H +N+
Sbjct: 121 RGKTGVQKRDERNKHFDEDRPI--VLDSLAQQHLVTKKRKFNNNSYHNPNVYNNI 173
>gi|85080737|ref|XP_956595.1| nuclear cap binding protein subunit 2 [Neurospora crassa OR74A]
gi|28917665|gb|EAA27359.1| nuclear cap binding protein subunit 2 [Neurospora crassa OR74A]
gi|350290593|gb|EGZ71807.1| nuclear cap binding protein subunit 2 [Neurospora tetrasperma FGSC
2509]
Length = 145
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 73/89 (82%)
Query: 81 QIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
++YELFS+ GEIK+++MGLD+ KTPCGFCF +Y+ +D D +KYI GT LD+R IR D
Sbjct: 23 KVYELFSKCGEIKRLVMGLDRLQKTPCGFCFVEYYTHQDALDCMKYIGGTKLDERIIRTD 82
Query: 141 FDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG+SGGQVRDEYR DYD
Sbjct: 83 LDPGFEEGRQYGRGKSGGQVRDEYREDYD 111
>gi|118401473|ref|XP_001033057.1| nuclear cap binding protein [Tetrahymena thermophila]
gi|89287403|gb|EAR85394.1| nuclear cap binding protein [Tetrahymena thermophila SB210]
Length = 236
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 98/138 (71%), Gaps = 2/138 (1%)
Query: 33 MASLFKDQ-RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
MAS D + S Y D++ +++++++ L +TTVYVGN+ F T E +YELFSRAG+
Sbjct: 1 MASFLYDSLQPQSLYYDKKSELSEQDYKKRLETTTTVYVGNLHFQTRESALYELFSRAGQ 60
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
IK +IMG++K ++ GFCF ++++ E+ AV+YIS T L+DR IRVD+D+GF++GRQ+
Sbjct: 61 IKDLIMGINKEGQS-AGFCFVVYHTHEEARIAVEYISQTKLNDRVIRVDWDYGFKEGRQF 119
Query: 152 GRGRSGGQVRDEYRTDYD 169
GRG G Q RD+YR D
Sbjct: 120 GRGMDGYQKRDQYRQQND 137
>gi|259479666|tpe|CBF70098.1| TPA: small subunit of nuclear cap-binding protein complex
(AFU_orthologue; AFUA_2G08570) [Aspergillus nidulans
FGSC A4]
Length = 185
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 88/124 (70%), Gaps = 8/124 (6%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFS--------RAGEIKKIIMGLDKNSKTP 106
Q++ E L +TT+YVGN+S ++ + + + R GEIK+++MGLD+ +KTP
Sbjct: 37 QKDPMEGLRDATTLYVGNLSTSSSPSSVSQPHNPDLLLTRFRCGEIKRLVMGLDRYNKTP 96
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF +Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR
Sbjct: 97 CGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYRE 156
Query: 167 DYDP 170
+YDP
Sbjct: 157 EYDP 160
>gi|340509145|gb|EGR34706.1| nuclear cap-binding protein, putative [Ichthyophthirius
multifiliis]
Length = 269
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
Query: 33 MAS-LFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
MAS L++ S Y D+R +++E+ E LL +TTVYVGN+ ++E +YELF RAG+
Sbjct: 1 MASYLYESLEPKSQYYDKRSNLSEKEYAEKLLNTTTVYVGNLHCNSSENSLYELFQRAGQ 60
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K IIMG+ +N + GFCF ++ + E +AV+++S T L DR IRVD+D+GF +GRQ+
Sbjct: 61 VKDIIMGVTENGEFA-GFCFVIYNTHEQARNAVEFLSHTRLYDRVIRVDYDYGFVEGRQF 119
Query: 152 GRGRSGGQVRDEYRTDYDP 170
GRG +G Q RD+YR + D
Sbjct: 120 GRGINGYQKRDQYRQNNDA 138
>gi|149244846|ref|XP_001526966.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449360|gb|EDK43616.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 209
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/117 (52%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K S Y R+ E E A+ S TVYVGN+S +TTEEQI+ELF ++G I KIIMGLD+
Sbjct: 17 KPSEYLIRKARHNYGELERAM-TSRTVYVGNLSHFTTEEQIHELFMKSGPIDKIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
N TPCGFCF ++ + E + +A+KY+ T+LD + I +D D GF++GRQ+GRGR GG
Sbjct: 76 NKLTPCGFCFVIYRTEEGSLNAMKYLQATVLDGQNISIDLDPGFREGRQFGRGRHGG 132
>gi|261328713|emb|CBH11691.1| nuclear cap binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 187
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 33 MASLFKDQRKLSAYRDR----RFPGTQEEF----EEALLASTTVYVGNMSFYTTEEQIYE 84
MA D AY DR R T++EF +E L STTVYVGN+SFYTTE+QI+E
Sbjct: 1 MAEYLIDLTPRMAYVDRHELLRSLLTEKEFIERRQEQLNKSTTVYVGNLSFYTTEDQIWE 60
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
FSR G I+ ++MGL + ++TPCGFCF +F S++ AV + GT+LDDR I V +D G
Sbjct: 61 HFSRCGHIRDLVMGLSEVTRTPCGFCFVVFESQDGAMSAVSDLHGTLLDDRVITVSWDVG 120
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
R+WGRG GGQV D R + D
Sbjct: 121 CDHTRRWGRGAPGGQVVDGVRQNLD 145
>gi|145531505|ref|XP_001451519.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419174|emb|CAK84122.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Query: 34 ASLFKD-QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE- 91
ASL+++ Q+ +S Y D+ T+EE+ L STT+Y+GN+S YTTEEQI+ELF+R G
Sbjct: 7 ASLYENLQQPISQYYDKSSNLTREEYFYKLSISTTLYLGNLSIYTTEEQIFELFNRVGAG 66
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
++++IMG +K + GFCF +++ ED ++A +Y+ LD+R IRVD+D G+ +GR++
Sbjct: 67 VRRLIMGRNKETGKAIGFCFIEYFNHEDAKEAHEYLDLLKLDERAIRVDWDIGYSEGREY 126
Query: 152 GRGRSGGQVRDEYRTDYDPD 171
GRG G QVRD YR DP+
Sbjct: 127 GRGTGGNQVRDSYRKVADPE 146
>gi|68075801|ref|XP_679820.1| nuclear cap-binding protein [Plasmodium berghei strain ANKA]
gi|56500646|emb|CAH95740.1| nuclear cap-binding protein, putative [Plasmodium berghei]
Length = 222
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L++ K Y DR E++ + S TVY+G++S YTTE+QIYE ++AG++
Sbjct: 1 MSHLYEQVYKKRKYYDRALCNDYEDWLNKIQYSKTVYIGDLSIYTTEQQIYEHMNKAGDV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ +E +V +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYKKKEGATQSVNFLNNSILDGRIIRVDEDLGVIGKRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPD--ILLLTLLNFMCWS--DVVNISFHRTEAFNSF 200
RG++G Q RDE +D D ++L L + + N S+H + +N +
Sbjct: 121 RGKTGVQKRDERNKHFDEDRPVVLDNLAQHLITKKRKINNNSYHYSNVYNIY 172
>gi|145532481|ref|XP_001451996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419673|emb|CAK84599.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Query: 34 ASLFKD-QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE- 91
ASL+++ Q+ +S Y D+ T+EE+ L STT+Y+GN+S YTTEEQI+ELF+R G
Sbjct: 7 ASLYENLQQPISQYYDKSSNLTREEYFYKLSISTTLYLGNLSIYTTEEQIFELFNRVGAG 66
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
++++IMG +K + GFCF +++ ED ++A +Y+ LD+R IRVD+D G+ +GR++
Sbjct: 67 VRRLIMGRNKETGKAIGFCFIEYFNHEDAKEAHEYLDLLKLDERAIRVDWDIGYSEGREY 126
Query: 152 GRGRSGGQVRDEYRTDYDPD 171
GRG G QVRD YR DP+
Sbjct: 127 GRGTGGNQVRDSYRKVADPE 146
>gi|67539944|ref|XP_663746.1| hypothetical protein AN6142.2 [Aspergillus nidulans FGSC A4]
gi|40738738|gb|EAA57928.1| hypothetical protein AN6142.2 [Aspergillus nidulans FGSC A4]
Length = 145
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 8/119 (6%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFS--------RAGEIKKIIMGLDKNSKTPCGFCF 111
E L +TT+YVGN+S ++ + + + R GEIK+++MGLD+ +KTPCGFCF
Sbjct: 2 EGLRDATTLYVGNLSTSSSPSSVSQPHNPDLLLTRFRCGEIKRLVMGLDRYNKTPCGFCF 61
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+Y+ +D D +KYI GT LD+R IR D D GF++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 62 VEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYREEYDP 120
>gi|72390047|ref|XP_845318.1| nuclear cap binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359293|gb|AAX79735.1| nuclear cap binding protein, putative [Trypanosoma brucei]
gi|70801853|gb|AAZ11759.1| nuclear cap binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 187
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 91/145 (62%), Gaps = 8/145 (5%)
Query: 33 MASLFKDQRKLSAYRDR----RFPGTQEEF----EEALLASTTVYVGNMSFYTTEEQIYE 84
MA D AY DR R T++EF +E L STTVYVGN+SFYTTE+QI+E
Sbjct: 1 MAEYLIDLTPRMAYVDRHELLRSLLTEKEFIERRQEQLNKSTTVYVGNLSFYTTEDQIWE 60
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
FSR G I+ ++MGL + ++TPCGFCF +F S++ AV + GT+LDDR I V +D G
Sbjct: 61 HFSRCGHIRDLVMGLSEVTRTPCGFCFVVFESQDGAMSAVIDLHGTLLDDRVITVSWDVG 120
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
R+WGRG GGQV D R + D
Sbjct: 121 CDHTRRWGRGAHGGQVVDGVRQNLD 145
>gi|448517553|ref|XP_003867824.1| Cbc2 protein [Candida orthopsilosis Co 90-125]
gi|380352163|emb|CCG22387.1| Cbc2 protein [Candida orthopsilosis]
Length = 216
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K S Y R+ E E A+ S TVYVGN+S +TTEEQI+ELF + G I KIIMGLD+
Sbjct: 17 KPSPYLIRKARHNYGELERAM-TSRTVYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
N TPCGFCF ++ + + +A+KY+ TILD + I +D D GF++GRQ+GRG+ GG
Sbjct: 76 NKLTPCGFCFVIYRTEQGAPNAMKYLQSTILDSQSISIDLDPGFREGRQFGRGKHGG 132
>gi|294917415|ref|XP_002778459.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239886859|gb|EER10254.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 231
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 90/127 (70%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L+ D + Y D++ T+EE+ ++L S+T+YVGN+SFYTTEEQI ELFS+ G++
Sbjct: 1 MAHLYVDLTPSTKYYDKKSGLTREEWYDSLQRSSTLYVGNLSFYTTEEQIMELFSKCGKV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KK+ MGL++ K+PCGFCF + SRED A ++ + DDR IRVD+D G GRQ+G
Sbjct: 61 KKVTMGLNRFKKSPCGFCFVEYDSREDAAWAQNLLNTSSFDDRVIRVDWDSGVSAGRQFG 120
Query: 153 RGRSGGQ 159
RG++G Q
Sbjct: 121 RGQTGDQ 127
>gi|354543799|emb|CCE40521.1| hypothetical protein CPAR2_105570 [Candida parapsilosis]
Length = 216
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K S Y R+ E E A+ S TVYVGN+S +TTEEQI+ELF + G I KIIMGLD+
Sbjct: 17 KPSQYLIRKARHNYAELERAM-TSRTVYVGNLSHFTTEEQIHELFMKCGAIDKIIMGLDR 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
N TPCGFCF ++ + + +A+KY+ TILD + I +D D GF++GRQ+GRG+ GG
Sbjct: 76 NKLTPCGFCFVIYRTEQGALNAMKYLQSTILDSQSISIDLDPGFREGRQFGRGKHGG 132
>gi|448097632|ref|XP_004198719.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380141|emb|CCE82382.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 188
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 75/105 (71%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S TVYVGN+S +TTEEQI+ELFS G I +IIMGLD+N TPCGFCF ++ E + +
Sbjct: 39 MHSKTVYVGNLSHFTTEEQIHELFSSCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
A+KY+ GT+LD + +D D GF++GRQ+GRG GGQ E D
Sbjct: 99 AMKYLKGTMLDSHTLEIDLDPGFREGRQFGRGIYGGQASQEVSHD 143
>gi|300122266|emb|CBK22839.2| unnamed protein product [Blastocystis hominis]
Length = 188
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 92/131 (70%), Gaps = 4/131 (3%)
Query: 33 MASLFKD--QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
MA+L+ +++ YRD + ++E+ AL +S+T+YVGN++F TTEE+I+ FS G
Sbjct: 1 MATLYNVPIRKEPKFYRD--YFSSKEDQLNALKSSSTIYVGNLNFSTTEERIFAAFSCCG 58
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
I K+IMG+++ + PCGFCF +FY+ E ++AV ++SG +D R IRV+ DWG+ DGRQ
Sbjct: 59 PIDKVIMGINRRTLAPCGFCFVIFYTHEAAQNAVDFMSGLKIDGRNIRVEMDWGYSDGRQ 118
Query: 151 WGRGRSGGQVR 161
+GR GGQ+R
Sbjct: 119 YGRAVDGGQIR 129
>gi|448101474|ref|XP_004199569.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
gi|359380991|emb|CCE81450.1| Piso0_002106 [Millerozyma farinosa CBS 7064]
Length = 187
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 75/105 (71%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S TVYVGN+S +TTEEQI+ELFS G I +IIMGLD+N TPCGFCF ++ E + +
Sbjct: 39 MHSKTVYVGNLSHFTTEEQIHELFSSCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
A+KY+ GT+LD + +D D GF++GRQ+GRG GGQ E D
Sbjct: 99 AMKYLKGTMLDSHTLEIDLDPGFREGRQFGRGIYGGQASQEASHD 143
>gi|219120813|ref|XP_002185638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582487|gb|ACI65108.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 127
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 81/125 (64%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y DR + + EAL S+T+Y+GN++F T + F++ G ++ + MGLD+ KT
Sbjct: 1 YWDRSHYKSPAQQMEALAKSSTLYIGNLAFSTRSRHVRAHFAQIGPVRSVQMGLDRLKKT 60
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF ++ R D AV +SGT LD R IRV+ D GFQ GRQ+GRG SGGQVRD+ R
Sbjct: 61 PCGFCFVEYHYRTDALAAVANLSGTKLDGRVIRVELDAGFQPGRQYGRGLSGGQVRDDRR 120
Query: 166 TDYDP 170
T DP
Sbjct: 121 TAADP 125
>gi|221053662|ref|XP_002258205.1| nuclear cap-binding protein [Plasmodium knowlesi strain H]
gi|193808038|emb|CAQ38742.1| nuclear cap-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 236
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 88/139 (63%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+++ K Y DR E++ + S TVY+GN+S YTTE+QIYE +AG +
Sbjct: 1 MSHLYEEVYKKRKYYDRALCNDYEDWLSKIQFSKTVYIGNLSIYTTEQQIYEHMRQAGNV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ S+E AV +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYRSKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGRRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPD 171
RG+SG Q RDE YD D
Sbjct: 121 RGKSGVQKRDERIKYYDED 139
>gi|344304827|gb|EGW35059.1| hypothetical protein SPAPADRAFT_131749 [Spathaspora passalidarum
NRRL Y-27907]
Length = 209
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K S Y R+ E E A+ S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+
Sbjct: 20 KPSPYLRRKARNNYHELERAI-TSKTVYVGNLSHFTTEEQIHELFSKCGAIDRIIMGLDR 78
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGR 155
N TPCGFCF ++ + + + +A+K++ TILD + I +D D GF++GRQ+GRG+
Sbjct: 79 NKLTPCGFCFVIYRTEQGSLNAMKFLQATILDSQSISIDLDPGFREGRQFGRGK 132
>gi|281338812|gb|EFB14396.1| hypothetical protein PANDA_011618 [Ailuropoda melanoleuca]
Length = 153
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 86/128 (67%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F +E E++L S+T+YVGN+SF+TT++QI+ELF R G K + MG+DK
Sbjct: 15 ELSQYRDQHFDVDDDEQEKSLKESSTLYVGNLSFHTTDKQIHELFGRCGNTKHVFMGVDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
K C FCF +Y R D E A+ ++GT LDD I D+D GF++GR++ RG+ GGQ
Sbjct: 75 IKKKACSFCFVEYYDRLDAEKAMWCLNGTSLDDHIIHTDWDLGFREGRRYSRGQPGGQAS 134
Query: 162 DEYRTDYD 169
+ + D D
Sbjct: 135 NVFCEDSD 142
>gi|389582530|dbj|GAB65268.1| nuclear cap-binding protein [Plasmodium cynomolgi strain B]
Length = 238
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 88/139 (63%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+++ K Y DR E++ + S TVY+GN+S YTTE+QIYE +AG +
Sbjct: 1 MSHLYEEVYKKRKYYDRALCNDYEDWLNKIQFSKTVYIGNLSIYTTEQQIYEHMRQAGNV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ S+E AV +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYRSKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGRRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPD 171
RG++G Q RDE YD D
Sbjct: 121 RGKTGVQKRDERIKYYDED 139
>gi|301774438|ref|XP_002922645.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
Length = 175
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 86/128 (67%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F +E E++L S+T+YVGN+SF+TT++QI+ELF R G K + MG+DK
Sbjct: 29 ELSQYRDQHFDVDDDEQEKSLKESSTLYVGNLSFHTTDKQIHELFGRCGNTKHVFMGVDK 88
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
K C FCF +Y R D E A+ ++GT LDD I D+D GF++GR++ RG+ GGQ
Sbjct: 89 IKKKACSFCFVEYYDRLDAEKAMWCLNGTSLDDHIIHTDWDLGFREGRRYSRGQPGGQAS 148
Query: 162 DEYRTDYD 169
+ + D D
Sbjct: 149 NVFCEDSD 156
>gi|150951548|ref|XP_001387884.2| small subunit of the nuclear mRNA cap-binding protein complex CBC
[Scheffersomyces stipitis CBS 6054]
gi|149388685|gb|EAZ63861.2| small subunit of the nuclear mRNA cap-binding protein complex CBC,
partial [Scheffersomyces stipitis CBS 6054]
Length = 167
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L S TVYVGN+S +TTEEQI+ELFS+ G I +IIMGLD+N TPCGFCF ++ E + +
Sbjct: 39 LHSKTVYVGNLSHFTTEEQIHELFSKCGSIDRIIMGLDRNKLTPCGFCFVVYKLEEGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
A+K++ TILD + + +D D GF++GRQ+GRG GGQ E ++
Sbjct: 99 AMKFLQKTILDGQSLSIDLDPGFREGRQFGRGIYGGQASQEASSE 143
>gi|115443016|ref|XP_001218315.1| nuclear cap binding protein subunit 2 [Aspergillus terreus NIH2624]
gi|114188184|gb|EAU29884.1| nuclear cap binding protein subunit 2 [Aspergillus terreus NIH2624]
Length = 115
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 70/85 (82%)
Query: 86 FSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGF 145
FSR GEIK+++MGLD+ +KTPCGFCF +Y+ +D D +KYI GT LD+R IR D D GF
Sbjct: 6 FSRCGEIKRLVMGLDRFTKTPCGFCFVEYYTHQDALDCLKYIGGTKLDERIIRTDLDPGF 65
Query: 146 QDGRQWGRGRSGGQVRDEYRTDYDP 170
++GRQ+GRG+SGGQVRDEYR +YDP
Sbjct: 66 EEGRQYGRGKSGGQVRDEYREEYDP 90
>gi|294656317|ref|XP_458582.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
gi|199431377|emb|CAG86716.2| DEHA2D02618p [Debaryomyces hansenii CBS767]
Length = 225
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L S TVYVGN+S +T+EEQI+ELFS+ G I +IIMGLD+N TPCGFCF ++ E + +
Sbjct: 39 LHSKTVYVGNLSHFTSEEQIHELFSKCGTIDRIIMGLDRNKLTPCGFCFVIYKREEGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
A+K++ GT LD + + +D D GF++GRQ+GRG GGQ E + D
Sbjct: 99 AMKFLKGTNLDSQVLEIDLDPGFREGRQFGRGVYGGQASQEGKQD 143
>gi|260950073|ref|XP_002619333.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC 42720]
gi|238846905|gb|EEQ36369.1| hypothetical protein CLUG_00492 [Clavispora lusitaniae ATCC 42720]
Length = 194
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 75/101 (74%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L S TVYVGN++ +TTEEQI+ELFS+ G I +IIMGLD+N TPCGFCF ++ E + +
Sbjct: 39 LQSKTVYVGNLTHFTTEEQIHELFSKCGTIDRIIMGLDRNKLTPCGFCFVIYKDEEGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
A+KY+ GT LD + + +D D GF++GRQ+GRG GGQ E
Sbjct: 99 AMKYLKGTYLDGQSLEIDLDPGFREGRQFGRGIYGGQASQE 139
>gi|256086199|ref|XP_002579291.1| nuclear cap binding protein [Schistosoma mansoni]
Length = 149
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 14/138 (10%)
Query: 34 ASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIK 93
AS +K S YRDRR + E + L +TT+Y+GN+SFYT EE
Sbjct: 13 ASFYK-----SPYRDRRNDFSPRELSQCLRETTTLYIGNLSFYTREEXX---------XX 58
Query: 94 KIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
+GL + KTPCGFCF + +R+ E A++YI+ T LDDR IR D+D GF++GRQ+GR
Sbjct: 59 XXXLGLHRFDKTPCGFCFVEYCTRDGAEMAMRYINKTRLDDRIIRTDWDAGFEEGRQYGR 118
Query: 154 GRSGGQVRDEYRTDYDPD 171
GRSGGQVRDE+R DYD +
Sbjct: 119 GRSGGQVRDEFRKDYDAE 136
>gi|156098007|ref|XP_001615036.1| nuclear cap-binding protein [Plasmodium vivax Sal-1]
gi|148803910|gb|EDL45309.1| nuclear cap-binding protein, putative [Plasmodium vivax]
Length = 236
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 88/139 (63%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+++ + Y DR E++ + S TVY+GN+S YTTE+QIYE +AG +
Sbjct: 1 MSHLYEEVYRKRKYYDRALCNDYEDWLNKIQFSKTVYIGNLSIYTTEQQIYEHMRQAGNV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+ IIMGL + K+PCGFCF ++ S+E AV +++ +ILD R IRVD D G R++G
Sbjct: 61 ENIIMGLHRTEKSPCGFCFVVYRSKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGRRKYG 120
Query: 153 RGRSGGQVRDEYRTDYDPD 171
RG++G Q RDE YD D
Sbjct: 121 RGKTGVQKRDERNKYYDED 139
>gi|342181442|emb|CCC90921.1| putative nuclear cap binding protein [Trypanosoma congolense
IL3000]
gi|343476365|emb|CCD12517.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 187
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 87/145 (60%), Gaps = 8/145 (5%)
Query: 33 MASLFKDQRKLSAYRDR----RFPGTQEEFEE----ALLASTTVYVGNMSFYTTEEQIYE 84
MA D AY DR R T++EF E L STTVYVGN+SFYTTEEQI+E
Sbjct: 1 MAEYLVDMTPRMAYVDRHELLRSLLTEKEFVERRQVQLDKSTTVYVGNLSFYTTEEQIWE 60
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
FS G ++ ++MGL ++TPCGFCF +F ++ AV + GT+LDDR I V +D G
Sbjct: 61 YFSGCGHVRDVVMGLSDVTRTPCGFCFIVFEGQDGAMSAVSDLHGTLLDDRVITVSWDVG 120
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
R+WGRG GGQV D R + D
Sbjct: 121 CDHARRWGRGAHGGQVVDGVRQNLD 145
>gi|396081066|gb|AFN82685.1| putative RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 157
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 88/132 (66%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
++ + F +R+ YR++ F GT EE+ EA S+TV++ N+ EE+I+ELF
Sbjct: 1 MTTLEQYFAGEREGYFYREKTFVGTDEEYVEAKKNSSTVFISNIPISVREERIWELFLLC 60
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
GE+K++IMGL++N+ CGFCF FY+ + AVKYI+G LD P+ +D D+GF DGR
Sbjct: 61 GEVKRVIMGLNRNTLRFCGFCFVEFYTVHSADMAVKYINGFRLDQSPLSIDKDYGFVDGR 120
Query: 150 QWGRGRSGGQVR 161
Q+GRG GG+V+
Sbjct: 121 QYGRGVFGGRVK 132
>gi|154341487|ref|XP_001566695.1| putative nuclear cap binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064020|emb|CAM40211.1| putative nuclear cap binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 188
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 78/115 (67%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
QE +E L STTVYVGN+SFYTTEEQ+Y FS G I+ I+MGL++ ++ PCGFCF +F
Sbjct: 31 QERRQEQLNYSTTVYVGNLSFYTTEEQLYSHFSPCGHIRDIVMGLNEATRCPCGFCFVVF 90
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
S+ AV+ + G++LDDR + V +D G R+WGRG GGQV D R + D
Sbjct: 91 ESQAAAVLAVQGLDGSLLDDRVVSVSWDVGCDGSRRWGRGAHGGQVVDGIRQNLD 145
>gi|190348560|gb|EDK41032.2| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 76/101 (75%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S TVYVGN+S +TTEEQ++ELFS+ G I +IIMGLD++ TPCGFCF ++ + +
Sbjct: 39 MHSKTVYVGNLSHFTTEEQVHELFSKCGRIDRIIMGLDRHRLTPCGFCFVIYKEESGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
A+KY+ GT LD + + +D D GF +GRQ+GRGR GGQ++ +
Sbjct: 99 AMKYLKGTSLDSQNLEIDLDPGFTEGRQFGRGRFGGQMKQD 139
>gi|344231941|gb|EGV63820.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+ L S T+YVGN+S +TTEEQ++ELFS+ G I +IIMGLD+N TPCGFCF ++
Sbjct: 36 QKALTSKTIYVGNLSNFTTEEQLFELFSKCGNIDRIIMGLDRNKLTPCGFCFVIYKEEGG 95
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
+ +A+KY+ T+LD + + +D D GF++GRQ+GRG GGQ E
Sbjct: 96 SLNAIKYLKATVLDGQSLEIDLDPGFREGRQFGRGLYGGQAAHE 139
>gi|378755337|gb|EHY65364.1| nuclear cap-binding protein subunit 2 [Nematocida sp. 1 ERTm2]
Length = 168
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 80/121 (66%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+ Y DRR+ GT++++ + LL S T+YVGN+S TTE Q+Y LFS+ G IK++IMGLD
Sbjct: 38 TMYFDRRYTGTEDDYFKELLTSGTIYVGNLSKKTTEAQLYTLFSQCGRIKRVIMGLDAKK 97
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
TPCGF F F E + A K+ S +L P+ +D D GF + RQ+GRG GGQ RD+
Sbjct: 98 YTPCGFAFVHFEKPEMSSLARKFFSKYMLGHLPLYIDLDSGFAENRQFGRGVKGGQARDD 157
Query: 164 Y 164
+
Sbjct: 158 F 158
>gi|401425433|ref|XP_003877201.1| putative nuclear cap binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493446|emb|CBZ28734.1| putative nuclear cap binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 188
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Query: 54 TQEEF----EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGF 109
T EEF +E L STTVYVGN+SFYTTEEQ+Y FS G ++ I+MGL++ +++PCGF
Sbjct: 26 TTEEFRERRQEQLNYSTTVYVGNLSFYTTEEQVYNHFSPCGHVRDIVMGLNEETRSPCGF 85
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
CF +F S+ AV G++LDDR + V +D G R+WGRG GGQV D R + D
Sbjct: 86 CFVVFESQAAAALAVHGFDGSLLDDRVVSVSWDVGCDRSRRWGRGAHGGQVVDGVRQNLD 145
>gi|301761424|ref|XP_002916135.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Ailuropoda
melanoleuca]
Length = 226
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 80/128 (62%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD F G EE E+ L + YTTE IYE FS++G IKKI+MG DK
Sbjct: 21 ELSQYRDPPFRGDNEEQEKLLKKRCRFDARKLPVYTTEGHIYEFFSKSGSIKKIVMGPDK 80
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
+T CGFCF +SR E+AV Y GT L DR I D+D GF++ +++GRG+SG QV
Sbjct: 81 MKRTACGFCFVEAHSRAGAENAVGYRHGTHLGDRIIHTDWDPGFKEDKRYGRGQSGDQVG 140
Query: 162 DEYRTDYD 169
DEY+ D D
Sbjct: 141 DEYQQDND 148
>gi|281350701|gb|EFB26285.1| hypothetical protein PANDA_004179 [Ailuropoda melanoleuca]
Length = 145
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 80/128 (62%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD F G EE E+ L + YTTE IYE FS++G IKKI+MG DK
Sbjct: 9 ELSQYRDPPFRGDNEEQEKLLKKRCRFDARKLPVYTTEGHIYEFFSKSGSIKKIVMGPDK 68
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
+T CGFCF +SR E+AV Y GT L DR I D+D GF++ +++GRG+SG QV
Sbjct: 69 MKRTACGFCFVEAHSRAGAENAVGYRHGTHLGDRIIHTDWDPGFKEDKRYGRGQSGDQVG 128
Query: 162 DEYRTDYD 169
DEY+ D D
Sbjct: 129 DEYQQDND 136
>gi|366993070|ref|XP_003676300.1| hypothetical protein NCAS_0D03580 [Naumovozyma castellii CBS 4309]
gi|342302166|emb|CCC69939.1| hypothetical protein NCAS_0D03580 [Naumovozyma castellii CBS 4309]
Length = 245
Score = 119 bits (299), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 42 KLSAY---RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
K SAY + R+ P EE ++L S T+YVGN+SFYT+EEQIYELFS+ G IK+IIMG
Sbjct: 21 KPSAYLLRKARKNPNGLEELRQSL-QSATIYVGNLSFYTSEEQIYELFSKCGFIKRIIMG 79
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
LD+ TPCGFCF ++ + ++ +A+KY+S T LDD+ I +D D GF+DGRQ+GRGR GG
Sbjct: 80 LDRFKFTPCGFCFVIYSNAQEALNALKYLSDTKLDDKHITIDLDPGFEDGRQFGRGRGGG 139
Query: 159 QVRDEYRTDYD 169
QV DE R ++D
Sbjct: 140 QVSDELRFEFD 150
>gi|146414409|ref|XP_001483175.1| hypothetical protein PGUG_05130 [Meyerozyma guilliermondii ATCC
6260]
Length = 198
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 75/101 (74%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S TVYVGN+S +TTEEQ++ELF + G I +IIMGLD++ TPCGFCF ++ + +
Sbjct: 39 MHSKTVYVGNLSHFTTEEQVHELFLKCGRIDRIIMGLDRHRLTPCGFCFVIYKEESGSLN 98
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
A+KY+ GT LD + + +D D GF +GRQ+GRGR GGQ++ +
Sbjct: 99 AMKYLKGTSLDSQNLEIDLDPGFTEGRQFGRGRFGGQMKQD 139
>gi|223973755|gb|ACN31065.1| unknown [Zea mays]
Length = 216
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 57/59 (96%)
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
A +YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP
Sbjct: 53 ASYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDP 111
>gi|146093580|ref|XP_001466901.1| putative nuclear cap binding protein [Leishmania infantum JPCM5]
gi|398019212|ref|XP_003862770.1| nuclear cap binding protein, putative [Leishmania donovani]
gi|134071265|emb|CAM69950.1| putative nuclear cap binding protein [Leishmania infantum JPCM5]
gi|322501001|emb|CBZ36078.1| nuclear cap binding protein, putative [Leishmania donovani]
Length = 188
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 54 TQEEF----EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGF 109
T EEF +E L S TVYVGN+SFYTTEEQ+Y FS G I+ I+MGL++ ++ PCGF
Sbjct: 26 TTEEFRERRQEQLNYSATVYVGNLSFYTTEEQVYNHFSPCGHIRDIVMGLNEATRCPCGF 85
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
CF +F S+ AV + G++LDDR + V +D G R+WGRG GGQV D R + D
Sbjct: 86 CFVVFESQAAAVLAVHGLDGSLLDDRVVSVSWDVGCDGSRRWGRGAHGGQVVDGVRQNLD 145
>gi|157872191|ref|XP_001684644.1| putative nuclear cap binding protein [Leishmania major strain
Friedlin]
gi|68127714|emb|CAJ05923.1| putative nuclear cap binding protein [Leishmania major strain
Friedlin]
Length = 188
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 54 TQEEF----EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGF 109
T EEF +E L STTVYVGN+SFYTTEEQ+ FS G I+ I+MGL++ ++ PCGF
Sbjct: 26 TAEEFRERRQEQLNYSTTVYVGNLSFYTTEEQVCNHFSPCGHIRDIVMGLNEATRCPCGF 85
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
CF +F S+ AV + G++LDDR + V +D G R+WGRG GGQV D R + D
Sbjct: 86 CFVVFESQAAAVLAVHGLDGSLLDDRVVSVSWDVGCDGSRRWGRGAHGGQVVDGVRQNLD 145
>gi|387592249|gb|EIJ87273.1| nuclear cap-binding protein subunit 2 [Nematocida parisii ERTm3]
gi|387597410|gb|EIJ95030.1| nuclear cap-binding protein subunit 2 [Nematocida parisii ERTm1]
Length = 149
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 83/126 (65%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KD + Y D+R+ GT++++ + LL S T+YVGN+S TE+Q+Y LFS+ G+IK++I+
Sbjct: 13 KDDELKTMYFDKRYTGTEDDYFKELLTSGTIYVGNLSKKITEDQLYTLFSQCGKIKRVII 72
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD TPCGF F F + E A K+ + +L + PI +D D GF + RQ+GRG G
Sbjct: 73 GLDAKKFTPCGFAFVQFENVETPSIARKFFAKYMLGNHPIYIDIDSGFAENRQFGRGMQG 132
Query: 158 GQVRDE 163
GQ +D+
Sbjct: 133 GQAKDD 138
>gi|160331123|ref|XP_001712269.1| ncbP2 [Hemiselmis andersenii]
gi|159765716|gb|ABW97944.1| ncbP2 [Hemiselmis andersenii]
Length = 143
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 74/99 (74%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S TVYVGN+SF+T EEQI+ELF R G IK+II+GL++ + TPCGFCF FY+ D ++ V
Sbjct: 35 SNTVYVGNLSFHTREEQIWELFFRIGNIKRIIIGLNRYNYTPCGFCFIEFYNLIDAKNCV 94
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
+ G ++ R I+++ D GF +GRQ+GRG+ GGQ +DE
Sbjct: 95 FFFRGFKIEKRVIKIELDPGFSNGRQFGRGKRGGQTQDE 133
>gi|338729448|ref|XP_003365896.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Equus
caballus]
Length = 221
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 3 ITKQYLWLVNRQKRTRHCFISSLLLGELSAMASLF--KDQRKLSAYRDRRFPGTQEEFEE 60
+ KQ++ V + R S LG +S + ++LS + D++F G EE E
Sbjct: 31 VVKQFVGSVTAAELDRELLPSRRPLGTVSNDLRILCSSSSQELSEHGDQQFGGGNEEHER 90
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
L S+T+YVGN+SFYTTEE + ELFSR G++K + MGL K K C FCF ++ R D
Sbjct: 91 LLKESSTLYVGNLSFYTTEEHVLELFSRCGDVKNVFMGLGKVKKAACNFCFVEYHKRADA 150
Query: 121 EDAVKYISGTILDDRPIRVDFD 142
E+A+ +++GT LDDR IRVD+D
Sbjct: 151 ENALWFLNGTRLDDRIIRVDWD 172
>gi|254565377|ref|XP_002489799.1| Small subunit of the heterodimeric cap binding complex that also
contains Sto1p [Komagataella pastoris GS115]
gi|238029595|emb|CAY67518.1| Small subunit of the heterodimeric cap binding complex that also
contains Sto1p [Komagataella pastoris GS115]
gi|328350216|emb|CCA36616.1| Nuclear cap-binding protein subunit 2 [Komagataella pastoris CBS
7435]
Length = 281
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
++ RR P EE +++L S TVYVG + Y TEEQI+ELFSR G+I++IIMGL+ +++
Sbjct: 29 HKARRNPNGYEELKKSL-QSATVYVGRIGVYVTEEQIHELFSRCGKIREIIMGLNAKTQS 87
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
P GFCF +F S +AVKY++GT++ + + +D D GF+DGRQ+GR G Q
Sbjct: 88 PAGFCFVIFSSPTSALNAVKYLNGTMIFNNKMEIDLDPGFEDGRQFGRATDGSQ 141
>gi|340054058|emb|CCC48352.1| putative nuclear cap binding protein, fragment, partial
[Trypanosoma vivax Y486]
Length = 184
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 86/145 (59%), Gaps = 8/145 (5%)
Query: 33 MASLFKDQRKLSAYRDR----RFPGTQEEF----EEALLASTTVYVGNMSFYTTEEQIYE 84
MA D AY DR R +++EF ++ L STTVYVGN+SFYTTEEQI+
Sbjct: 1 MAEYIVDVTPRMAYVDRQELLRSLLSEKEFVLRRQQQLNKSTTVYVGNLSFYTTEEQIWV 60
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
FS G I+ ++MGL + ++TPCGFCF +F + AV + T+LDDR I V +D G
Sbjct: 61 HFSSCGHIRDLVMGLSEATRTPCGFCFVVFEQQSAAMSAVSDLHETLLDDRIITVSWDVG 120
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
R+WGRG GGQV D R + D
Sbjct: 121 CDHSRRWGRGAYGGQVVDGVRQNLD 145
>gi|71416346|ref|XP_810208.1| nuclear cap binding protein [Trypanosoma cruzi strain CL Brener]
gi|70874706|gb|EAN88357.1| nuclear cap binding protein, putative [Trypanosoma cruzi]
Length = 188
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 8/145 (5%)
Query: 33 MASLFKDQRKLSAYRDR----RFPGTQEEF----EEALLASTTVYVGNMSFYTTEEQIYE 84
MA D AY DR R ++++F +E L STTVYVGN+SFYTTE QI+E
Sbjct: 1 MAEYLVDVTPRMAYVDRQELLRSLLSEKDFVARRQEQLERSTTVYVGNLSFYTTEGQIWE 60
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F+ G ++ ++MGL++ ++TPCGFCF +F + AV + G++LDDR I V +D G
Sbjct: 61 HFASCGHVRDVVMGLNEATRTPCGFCFVVFEQQCAAMCAVSDMHGSLLDDRRITVSWDVG 120
Query: 145 FQDGRQWGRGRSGGQVRDEYRTDYD 169
R+WGRG GGQV D R + D
Sbjct: 121 CDASRRWGRGAHGGQVVDVLRQNLD 145
>gi|237838167|ref|XP_002368381.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|211966045|gb|EEB01241.1| nuclear cap-binding protein, putative [Toxoplasma gondii ME49]
gi|221484348|gb|EEE22644.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii GT1]
gi|221505675|gb|EEE31320.1| 20 kD nuclear cap binding protein, putative [Toxoplasma gondii VEG]
Length = 282
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 93/139 (66%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ + Y DRR ++E+++E + S VYVGN++F TTE+++YE+FS+AG I
Sbjct: 1 MSRLYASIKGRDTYYDRRTARSKEDWQEKVSRSCVVYVGNLNFSTTEDELYEVFSQAGLI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ-DG-RQ 150
++++MGL++ ++ PCGF F F+ + + AV ++G D R IRVD D G DG R+
Sbjct: 61 RRVVMGLNRQTRAPCGFAFVEFFRPQSAQIAVAVLNGCSCDGRVIRVDADSGEDIDGDRK 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
+GRG +G Q RDEYR +YD
Sbjct: 121 YGRGFTGRQWRDEYREEYD 139
>gi|401825699|ref|XP_003886944.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998101|gb|AFM97963.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 157
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 87/132 (65%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
+ + F +R+ YR++ F GT EE+ EA S+T++V N+ EE+I+ELF
Sbjct: 1 MMILEKYFTGEREGYFYREKTFVGTDEEYIEAKKNSSTIFVSNIPTSVREERIWELFLLC 60
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
G++K++IMGL++N+ CGFCF FY+ + AV+Y++G LD P+ +D D+GF +GR
Sbjct: 61 GDVKRVIMGLNRNTLRFCGFCFVEFYTVSSADAAVRYVNGFRLDQSPLSIDKDYGFVEGR 120
Query: 150 QWGRGRSGGQVR 161
Q+GRG GG+V+
Sbjct: 121 QYGRGVFGGRVK 132
>gi|19173034|ref|NP_597585.1| similarity to 20kDa NUCLEAR CAP BINDING PROTEIN [Encephalitozoon
cuniculi GB-M1]
gi|19168701|emb|CAD26220.1| similarity to 20kDa NUCLEAR CAP BINDING PROTEIN [Encephalitozoon
cuniculi GB-M1]
gi|449329712|gb|AGE95982.1| 20kDa nuclear cap binding protein [Encephalitozoon cuniculi]
Length = 157
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 82/116 (70%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YR++ F GT EE+ EA +S+TV+V N+S EE+I+ELF G +++++MGL++N+
Sbjct: 17 YREKTFVGTDEEYLEAKRSSSTVFVSNISTSVREERIWELFLLCGPVRRVVMGLNRNTLR 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
CGFCF FYS + AV+Y++G L+ P+ +D D+GF DGRQ+GRG GG+V+
Sbjct: 77 FCGFCFVEFYSTDSANVAVRYLNGFRLEQSPLAIDKDYGFVDGRQYGRGVFGGRVK 132
>gi|209878472|ref|XP_002140677.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556283|gb|EEA06328.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 91/144 (63%), Gaps = 3/144 (2%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ K +Y D++ ++E + E + STTVYVGN+SF+T E IYELF+ G +
Sbjct: 1 MSHLYHSLGKEHSYFDKK-NYSKEAWLEKISKSTTVYVGNLSFFTPEHIIYELFNSCGPV 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
K++IMGL+ + CGFCF +Y +D AV +++ + D R IRVD+D G + R+
Sbjct: 60 KQVIMGLNSQTLQFCGFCFVQYYDHKDALAAVSFLNQSYCDGREIRVDWDSGDNILENRR 119
Query: 151 WGRGRSGGQVRDEYRTDYDPDILL 174
+GRG +G Q RDE RT DPD ++
Sbjct: 120 YGRGTAGFQWRDELRTQIDPDRII 143
>gi|328706453|ref|XP_003243101.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706455|ref|XP_003243102.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 210
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS Y D +F GT+ E+ + L STTVYVGN++ +TE +++LFS+AG+IK IIMGLDK
Sbjct: 84 LSKYFDCKFKGTRTEYSKKLEESTTVYVGNLNLLSTEADVHKLFSKAGKIKTIIMGLDKQ 143
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
+ P GFCF + +R +TE+ +K ++ ++L + + VD+D GF +GRQ+ R + R+
Sbjct: 144 TLCPGGFCFVEYETRAETENCMKTLNKSLLHGKKLLVDWDAGFIEGRQYSRVK-----RN 198
Query: 163 EYRTDYDPD 171
+ R+ P+
Sbjct: 199 QQRSYMHPN 207
>gi|401401970|ref|XP_003881139.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
gi|325115551|emb|CBZ51106.1| putative nuclear cap-binding protein [Neospora caninum Liverpool]
Length = 287
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 90/139 (64%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ + Y DRR + EE++ + S VYVGN++F TTE+++YE+FS AG +
Sbjct: 1 MSRLYASLKGRDTYYDRRSANSLEEWKAKVARSCVVYVGNLNFSTTEDELYEVFSHAGLV 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ-DG-RQ 150
++++MGL++ +++PCGF F ++ + A+ ++G D R IRVD D G DG R+
Sbjct: 61 RRVVMGLNRQTRSPCGFAFVEYFRPRSAQVAIAVLNGCNCDGRVIRVDADSGEDIDGDRK 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
+GRG +G Q RDEYR +YD
Sbjct: 121 YGRGFTGRQWRDEYREEYD 139
>gi|432099893|gb|ELK28800.1| Nuclear cap-binding protein subunit 2 [Myotis davidii]
Length = 143
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 75/109 (68%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS + + F E E+ L S T+YVGN+S T+EEQI+ELFSR G+I+ + MGLDK
Sbjct: 15 ELSKDQSQHFSADNREHEKLLKESCTLYVGNLSICTSEEQIFELFSRCGDIRNVFMGLDK 74
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
KTPCGFCF +Y+R D E+A+ +++ TILDD I + GF++GRQ
Sbjct: 75 LKKTPCGFCFVEYYNRADAENAMWFLNETILDDHTIHTERYVGFREGRQ 123
>gi|119574005|gb|EAW53620.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_a [Homo
sapiens]
gi|119574007|gb|EAW53622.1| nuclear cap binding protein subunit 2, 20kDa, isoform CRA_a [Homo
sapiens]
gi|193787466|dbj|BAG52672.1| unnamed protein product [Homo sapiens]
Length = 86
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLDK KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRS
Sbjct: 1 MGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRS 60
Query: 157 GGQVRDEYRTDYDP 170
GGQVRDEYR DYD
Sbjct: 61 GGQVRDEYRQDYDA 74
>gi|320580051|gb|EFW94274.1| nuclear cap binding complex subunit [Ogataea parapolymorpha DL-1]
Length = 239
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 72/97 (74%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
++S+TVY+G +SF TTEEQ++ELFS G I +IIMGLDK+ TP GFCF +F + +
Sbjct: 46 MSSSTVYIGKLSFDTTEEQLFELFSNCGTIVRIIMGLDKHKLTPTGFCFIIFDTPSGALN 105
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
++KY++ T ++ R + +D D GF++GRQ+GRG GGQ
Sbjct: 106 SIKYLNKTKVNGRSMEIDLDPGFEEGRQFGRGADGGQ 142
>gi|443925825|gb|ELU44587.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 224
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 89/159 (55%), Gaps = 27/159 (16%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYV--------------------GN 72
MA + + S YRD + ++ +E L S+T+YV GN
Sbjct: 1 MAQVVNPLDQASTYRDSQSRLDAQKTQELLDRSSTLYVCFVVRPVKYIAELLDTLKQVGN 60
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+SFYTTEEQIY+LF + + KTPCGFCF +Y+ + AV+YISGT L
Sbjct: 61 LSFYTTEEQIYDLFQKCASPED-----GGGVKTPCGFCFVEYYTHAEATAAVRYISGTKL 115
Query: 133 DDRPIRVDFDWGFQDGRQWGRGRSGGQV--RDEYRTDYD 169
D+R +R D D G+++GRQ+GRG+SGGQV + E R DYD
Sbjct: 116 DERIVRCDLDLGYREGRQYGRGKSGGQVCRQHELRQDYD 154
>gi|303388671|ref|XP_003072569.1| putative RNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
gi|303301710|gb|ADM11209.1| putative RNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
Length = 157
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 79/116 (68%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
YR++ F GT EE+ EA S+T++V N+ EE+I+ELF G +K++IMGL++N+
Sbjct: 17 YREKTFVGTDEEYLEAKKNSSTIFVSNVPTNVREERIWELFLLCGAVKRVIMGLNRNTLR 76
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
CGFCF FY + AV+YI+G +D P+ +D D+GF +GRQ+GRG GG+V+
Sbjct: 77 FCGFCFVEFYEVCSADMAVRYINGFRIDQVPLTIDKDYGFVEGRQYGRGVFGGRVK 132
>gi|71033685|ref|XP_766484.1| nuclear cap-binding protein [Theileria parva strain Muguga]
gi|68353441|gb|EAN34201.1| nuclear cap-binding protein, putative [Theileria parva]
Length = 219
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 23 SSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQI 82
+S + M+ L+ Y D++ + EE++E + S+TVYVGN++F T EE+I
Sbjct: 33 TSTIHNNTCIMSELYDRISNERVYWDKKSCSSIEEWKEKIANSSTVYVGNLAFSTPEERI 92
Query: 83 YELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFD 142
+E+ AGEI +I++GL+ K+PCGF F ++ + + AVK G I+D R IRVD D
Sbjct: 93 HEVLQAAGEIDRIVLGLNSIKKSPCGFAFVVYKDAKSAKRAVKMFKGCIIDGRVIRVDAD 152
Query: 143 WG--FQDGRQWGRGRSGGQVRDEYRTDYD 169
G D R+ RG +G Q RD +R ++D
Sbjct: 153 PGTSIDDTRRLARGLNGYQWRDAFRKEFD 181
>gi|66475440|ref|XP_627536.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
gi|32398753|emb|CAD98713.1| nuclear cap-binding protein, possible [Cryptosporidium parvum]
gi|46228990|gb|EAK89839.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
Length = 213
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 7/147 (4%)
Query: 54 TQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFAL 113
+++++ + STTVYVGN+SF+TTEE I E+F G IK I +GL+ + PCGFCF
Sbjct: 21 SKDDWIAKISKSTTVYVGNLSFFTTEEIISEVFGLCGPIKAIYLGLNHQTMQPCGFCFVQ 80
Query: 114 FYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQWGRGRSGGQVRDEYRTDYDPD 171
+YS D AV +++ + D R IRVD+D G R++GRG SG Q RDE R DPD
Sbjct: 81 YYSHADALTAVTFLNRSYCDGREIRVDWDSGEDISGSRRYGRGNSGFQWRDELRNQIDPD 140
Query: 172 ILLLTL-----LNFMCWSDVVNISFHR 193
L + +S N SFHR
Sbjct: 141 RQLDVVDTNNHSKSYKFSHGSNSSFHR 167
>gi|403340450|gb|EJY69510.1| Nuclear cap-binding protein subunit 2 [Oxytricha trifallax]
Length = 541
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Query: 45 AYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI-KKIIMGLDKNS 103
Y DR+ TQEE+ + + STT+YVGN+SFYT E+Q+ FS +I ++IMGL+ +
Sbjct: 16 TYYDRKQGLTQEEYFQKIKTSTTLYVGNLSFYTREDQLLNYFSLCSQILPRLIMGLNNQT 75
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
KTPCGFCF + ++++ A + + +D R +RVD+D GF+ GRQ+GRG++G Q+RDE
Sbjct: 76 KTPCGFCFVEYATKQEASLARALLDHSNIDGRIVRVDWDVGFEWGRQYGRGKNGYQIRDE 135
Query: 164 YR 165
R
Sbjct: 136 LR 137
>gi|84998178|ref|XP_953810.1| RNA binding protein [Theileria annulata]
gi|65304807|emb|CAI73132.1| RNA binding protein, putative [Theileria annulata]
Length = 177
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Y D++ + EE++E + S+TVYVGN++F T EE+I+E+ AGEI
Sbjct: 1 MSELYDRISNERVYWDKKSCSSIEEWKEKIANSSTVYVGNLAFSTPEERIHEVLQAAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
+I++GL+ K+PCGF F ++ + + AVK G I+D R IRVD D G D R+
Sbjct: 61 DRIVLGLNSIKKSPCGFAFVVYKDVKSAKRAVKMFKGCIIDGRVIRVDADPGTSIDDTRR 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
RG +G Q RD +R ++D
Sbjct: 121 LARGLNGYQWRDAFRKEFD 139
>gi|67601215|ref|XP_666381.1| nuclear cap-binding protein [Cryptosporidium hominis TU502]
gi|54657364|gb|EAL36149.1| nuclear cap-binding protein [Cryptosporidium hominis]
Length = 213
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ LF +Y D++ +++++ + STTVYVGN+SF+TTEE I E+F G I
Sbjct: 1 MSYLFHAIGHEYSYFDKK-NYSKDDWIAKISKSTTVYVGNLSFFTTEEIIGEVFGLCGPI 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
K I +GL+ + PCGFCF +Y+ D AV +++ + D R IRVD+D G R+
Sbjct: 60 KAIYLGLNHQTMQPCGFCFVQYYNHADALTAVTFLNRSYCDGREIRVDWDSGEDISGSRR 119
Query: 151 WGRGRSGGQVRDEYRTDYDPDILL 174
+GRG SG Q RDE R DPD L
Sbjct: 120 YGRGNSGFQWRDELRNQIDPDRQL 143
>gi|361130115|gb|EHL01969.1| putative Nuclear cap-binding protein subunit 2 [Glarea lozoyensis
74030]
Length = 104
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 22/98 (22%)
Query: 72 NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTI 131
+ SFYTTEEQI+ELF++ GEIK++IMGLD+ +KTPC T
Sbjct: 4 HRSFYTTEEQIHELFAKCGEIKRLIMGLDRFNKTPC----------------------TK 41
Query: 132 LDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
LD+R IR D D GFQ+GRQ+GRG+SGGQVRDEYR +YD
Sbjct: 42 LDERIIRTDLDPGFQEGRQYGRGKSGGQVRDEYREEYD 79
>gi|300707377|ref|XP_002995899.1| hypothetical protein NCER_101089 [Nosema ceranae BRL01]
gi|239605135|gb|EEQ82228.1| hypothetical protein NCER_101089 [Nosema ceranae BRL01]
Length = 144
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 82/134 (61%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
+ + +K S YR++ F GT EE+ E + STTVY+ N+ E +I+EL
Sbjct: 1 MYPLEKYYKPTVPTSFYREKTFTGTDEEYLELINNSTTVYINNIDHSVDETRIWELAMLF 60
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
GE+K++IMG+++N T CGFCF FY +ED E + + + + VD D+GF++GR
Sbjct: 61 GEVKRVIMGINRNFLTFCGFCFVEFYRKEDAEKCKLWADKLRFEKKSLSVDKDYGFREGR 120
Query: 150 QWGRGRSGGQVRDE 163
Q+GRG GG+++D+
Sbjct: 121 QYGRGVFGGRMKDD 134
>gi|224001402|ref|XP_002290373.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973795|gb|EED92125.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 125
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y DR + E AL S+TVYVGN++F T + F + G + + +GLD+ KT
Sbjct: 8 YWDRSHYDSPESQIRALAHSSTVYVGNLAFSTRTIHLRRHFEQLGPVADVQVGLDRFKKT 67
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE 163
PCGF F F R D AV ++GT LD R IRV+ D GF+ GRQ+GRG SGGQVRD+
Sbjct: 68 PCGFAFVEFRHRIDALSAVANLTGTKLDGRVIRVELDAGFKPGRQYGRGASGGQVRDD 125
>gi|429962100|gb|ELA41644.1| hypothetical protein VICG_01277 [Vittaforma corneae ATCC 50505]
Length = 140
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Query: 29 ELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR 88
EL+ ++ D R Y ++ F GTQEE+ +AL S T+YV N+ EE+++ LFS
Sbjct: 2 ELAKYFAMEDDNR---IYIEKSFKGTQEEYLKALEDSKTIYVSNIDENIKEERLWMLFSM 58
Query: 89 AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDG 148
GE+K++IMG+++ T CGFCF F +ED ++A+ + LD + ++VD D GF +
Sbjct: 59 VGEVKRVIMGINRGLLTFCGFCFVEFERKEDADNAIIFFKDFCLDGKFLKVDKDMGFAEN 118
Query: 149 RQWGRGRSGGQVRDE 163
RQ+GRG GG VR +
Sbjct: 119 RQYGRGVFGGTVRSD 133
>gi|392886213|ref|NP_001250553.1| Protein NCBP-2, isoform b [Caenorhabditis elegans]
gi|345107388|emb|CCD31069.1| Protein NCBP-2, isoform b [Caenorhabditis elegans]
Length = 91
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+
Sbjct: 1 MGLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKH 60
Query: 157 GGQVRDEYRTDYDPD 171
GGQVRDEYR DYDP+
Sbjct: 61 GGQVRDEYRKDYDPE 75
>gi|440492742|gb|ELQ75283.1| Nuclear cap-binding protein complex, subunit CBP20 (RRM
superfamily) [Trachipleistophora hominis]
Length = 193
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
Q AYRDR F GT E++E+ L + T+Y+GN+ TTEE+++ +F+ I++IIMGL
Sbjct: 7 QPSKKAYRDRTFSGTDEQYEKLLSTTCTLYIGNLPLSTTEERLWTVFADL-PIRRIIMGL 65
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
++N+ CGF F FY+ D A + ++D R + VD D+GF +GRQWGRG +GG
Sbjct: 66 NRNNLLFCGFAFVEFYNHVDCRKACVASANMMIDGRSVWVDMDYGFTEGRQWGRGFAGGS 125
Query: 160 VRDEYR 165
+ + R
Sbjct: 126 FKADMR 131
>gi|403221324|dbj|BAM39457.1| uncharacterized protein TOT_010000912 [Theileria orientalis strain
Shintoku]
Length = 176
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M++L+ Y D++ T+ E+ + + S+TVYVGN++F T EE+I+E+ AGEI
Sbjct: 1 MSALYDSISTERVYWDKKSCSTKNEWLDKIAHSSTVYVGNLAFSTPEERIHEVLQAAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
+I++GL+ K+PCGF F ++ + + A+K G I+D R IRVD D G + R+
Sbjct: 61 DRIVLGLNSIQKSPCGFAFVIYKDVKSAKRAIKMFKGCIIDGRVIRVDADPGDNVDESRR 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
+ RG +G Q RD +R ++D
Sbjct: 121 FARGINGYQWRDAFRKEFD 139
>gi|353227277|emb|CCA77790.1| probable nuclear cap binding protein subunit 2 [Piriformospora
indica DSM 11827]
Length = 136
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 59/73 (80%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLD+N++TPCGFCF +YS + +KYISGT LD+R IR D D G++DGRQ+GRGRS
Sbjct: 1 MGLDRNTRTPCGFCFVEYYSHAEALACMKYISGTKLDERIIRCDLDAGYKDGRQFGRGRS 60
Query: 157 GGQVRDEYRTDYD 169
GGQVRDE+R DYD
Sbjct: 61 GGQVRDEHRQDYD 73
>gi|299753964|ref|XP_001833661.2| cap-binding protein CPB20 [Coprinopsis cinerea okayama7#130]
gi|298410544|gb|EAU88206.2| cap-binding protein CPB20 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 61/74 (82%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLD+N++TPCGFCF +Y+ + +++Y+SGT LD+R IR D D G+++GRQ+GRG+S
Sbjct: 1 MGLDRNTRTPCGFCFVEYYTHAEALASMRYVSGTKLDERIIRCDLDLGYKEGRQFGRGKS 60
Query: 157 GGQVRDEYRTDYDP 170
GGQVRDE+R DYDP
Sbjct: 61 GGQVRDEHRQDYDP 74
>gi|31873246|emb|CAD97614.1| hypothetical protein [Homo sapiens]
Length = 119
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 71/105 (67%), Gaps = 4/105 (3%)
Query: 15 KRTRHC--FISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGN 72
+ + HC + ++ G L A+ S +LS YRD+ F G EE E+ L S T+YVGN
Sbjct: 8 RESPHCGPLLCTMSGGLLKALRS--DSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYVGN 65
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSR 117
+SFYTTEEQIYELFS++G+IKKIIMGLDK KT CGFCF + S
Sbjct: 66 LSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYPSH 110
>gi|429963902|gb|ELA45900.1| hypothetical protein VCUG_02606 [Vavraia culicis 'floridensis']
Length = 193
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
Q AYRDR F GT E++E+ L + T+Y+GN+ TTEE+++ +F ++++IMG+
Sbjct: 7 QPPKKAYRDRTFTGTDEQYEKLLSTTCTLYIGNLPLSTTEERLWTVFGDV-PVRRVIMGV 65
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
++N++ CGF F FYS + A + ++D + + VD D+GF +GRQWGRG +GG
Sbjct: 66 NRNNRLFCGFAFVEFYSHANCARACVASASMVIDGKSVWVDMDYGFAEGRQWGRGFAGGS 125
Query: 160 VRDEYR 165
+ + R
Sbjct: 126 FKGDMR 131
>gi|156086648|ref|XP_001610733.1| nuclear cap-binding protein [Babesia bovis T2Bo]
gi|154797986|gb|EDO07165.1| nuclear cap-binding protein, putative [Babesia bovis]
Length = 172
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L+ K Y D++ + EE+ + S+TVYVGN+SF T EE+I+E+FS+AG I
Sbjct: 1 MAKLYHSISKERKYWDKKLCSSPEEWNYRIQRSSTVYVGNLSFATPEERIHEIFSQAGRI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
+I++GL+ K PCGF F ++ + ++ +G ++D R IRVD D G R+
Sbjct: 61 HRIVLGLNSIEKKPCGFAFVIYDTIPAARRSIGMFNGCVIDGRIIRVDADTGDNIDTDRK 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
RG +G Q RD +R ++D
Sbjct: 121 LARGINGYQWRDVFRKEFD 139
>gi|428673197|gb|EKX74110.1| nuclear cap binding protein family member protein [Babesia equi]
Length = 170
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Y D++ EE+ E + S+TVYVGN++F T EE+I+E+ AGEI
Sbjct: 1 MSFLYDKISNARTYWDKKTCSCPEEWNEKIAKSSTVYVGNLAFTTPEERIHEVLQAAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
++I++GL+ K+PCGF F ++ + + AV G ++D R IRVD D G R+
Sbjct: 61 ERIVLGLNSIQKSPCGFAFVVYKDIKSAKRAVGMFKGCVIDGRVIRVDADPGDNIDTERR 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
RG +G Q RD +R ++D
Sbjct: 121 LARGINGYQWRDAFRKEFD 139
>gi|24954104|gb|AAN64583.1| RNA-binding protein [Babesia bovis]
Length = 172
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L+ K Y D++ + EE+ + S+TVYVGN+SF T EE+I+E+FS+AG I
Sbjct: 1 MAKLYHSISKERKYWDKKLCSSPEEWNYRIQRSSTVYVGNLSFATPEERIHEIFSQAGRI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG--FQDGRQ 150
+I++GL+ K PCGF F ++ + ++ +G ++D R IRVD D G R+
Sbjct: 61 HRIVLGLNSIEKKPCGFAFVIYDTIPAARRSIGMFNGCVIDGRIIRVDADTGDNVDTDRK 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
RG +G Q RD +R ++D
Sbjct: 121 LARGINGYQWRDVFRKEFD 139
>gi|385303244|gb|EIF47332.1| cbc2p [Dekkera bruxellensis AWRI1499]
Length = 341
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 66/91 (72%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
++S T+Y+G ++F TTEEQ++ELF+ G IK+IIMGLDK TP GFCF +F +
Sbjct: 45 MSSATIYIGGLTFTTTEEQLFELFNDCGSIKQIIMGLDKKKLTPAGFCFIIFDKPRSALN 104
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
AVK+++ T ++ +P+ +D D GF++GRQ+ +
Sbjct: 105 AVKFMNKTKINGKPMNIDLDPGFEEGRQFXK 135
>gi|123455280|ref|XP_001315386.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121898061|gb|EAY03163.1| hypothetical protein TVAG_345370 [Trichomonas vaginalis G3]
Length = 155
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 67/101 (66%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+T+YVGN++F TTE IY +FS+ G IK+II G++K + TPCGFCF F+ R +
Sbjct: 37 SSTIYVGNLNFSTTEAAIYSVFSQFGPIKRIIRGVNKLTLTPCGFCFVEFFDRASALATL 96
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
+D +R D D G++ GR++GRG SG QVRDE++
Sbjct: 97 GKSIKIKIDGEIVRCDLDRGYEVGREFGRGASGNQVRDEHK 137
>gi|60697677|gb|AAX30911.1| SJCHGC08688 protein [Schistosoma japonicum]
Length = 88
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGL + KTPCGFCF + +R+ E A++YI+ T LDDR IR D+D GF++GRQ+GRGRS
Sbjct: 1 MGLHRFDKTPCGFCFVEYCTRDGAEMAMRYINKTRLDDRIIRTDWDAGFEEGRQYGRGRS 60
Query: 157 GGQVRDEYRTDYDPD 171
GGQVRDE+R DYD +
Sbjct: 61 GGQVRDEFRKDYDAE 75
>gi|399217437|emb|CCF74324.1| unnamed protein product [Babesia microti strain RI]
Length = 166
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MA L++ Y D++ + E+ + L + TVYVGN++F T EE+I+++F G+I
Sbjct: 1 MADLYEIIENKRKYWDKKSCSSPAEWFDKLDRTCTVYVGNLTFTTPEERIHQVFRMVGQI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDW--GFQDGRQ 150
+ MGL+ + +PCGF F + E + +V ++G +D R IRVD D G D R+
Sbjct: 61 DHVTMGLNSVTLSPCGFAFVTYKDSEHAKQSVHALNGCYIDGRVIRVDLDAGNGVDDNRK 120
Query: 151 WGRGRSGGQVRDEYRTDYD 169
RG G Q RD +R D+D
Sbjct: 121 LARGLDGNQWRDAFRDDFD 139
>gi|67474332|ref|XP_652915.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56469819|gb|EAL47528.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449704767|gb|EMD44946.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 184
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Q L Y DR T E+ + + STT+YVGN+S ++++Y LF R G I
Sbjct: 1 MSELYITQPTLE-YFDRESGFTPEQMIQKISTSTTLYVGNVSHSMNDKRVYTLFGRFGNI 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++IMG++ +S PCGFCF F R D A+K + T + + IR+D+D+GF +GRQ+G
Sbjct: 60 NRVIMGVN-HSNEPCGFCFVEFNKRNDAALAMKALDRTQVFGQYIRIDWDYGFVEGRQYG 118
Query: 153 RGRSGGQ 159
RG G Q
Sbjct: 119 RGDGGEQ 125
>gi|407035052|gb|EKE37504.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 184
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Q L Y DR T E+ + + STT+YVGN+S ++++Y LF R G I
Sbjct: 1 MSELYITQPTLE-YFDRESGFTPEQMIQKISTSTTLYVGNVSHSMNDKRVYTLFGRFGNI 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++IMG++ +S PCGFCF F R D A+K + T + + IR+D+D+GF +GRQ+G
Sbjct: 60 NRVIMGVN-HSNEPCGFCFVEFNKRNDAALAMKALDRTQVFGQYIRIDWDYGFVEGRQYG 118
Query: 153 RGRSGGQ 159
RG G Q
Sbjct: 119 RGDGGEQ 125
>gi|167377977|ref|XP_001734617.1| nuclear cap-binding protein subunit [Entamoeba dispar SAW760]
gi|165903822|gb|EDR29251.1| nuclear cap-binding protein subunit, putative [Entamoeba dispar
SAW760]
Length = 184
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M+ L+ Q L Y DR T E+ + + STT+YVGN+S ++++Y LF R G I
Sbjct: 1 MSELYITQPTLE-YFDRESGFTPEQMIQKISTSTTLYVGNVSHSMNDKRVYTLFGRFGNI 59
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++IMG++ +S PCGFCF F R D A+K + T + + IR+D+D+GF +GRQ+G
Sbjct: 60 NRVIMGVN-HSNEPCGFCFVEFNKRNDAALAMKALDRTQVFGQYIRIDWDYGFVEGRQYG 118
Query: 153 RGRSGGQ 159
RG G Q
Sbjct: 119 RGDGGEQ 125
>gi|401881553|gb|EJT45851.1| 20 kDa nuclear cap binding protein (ncbp) [Trichosporon asahii var.
asahii CBS 2479]
gi|406696569|gb|EKC99851.1| 20 kDa nuclear cap binding protein (ncbp) [Trichosporon asahii var.
asahii CBS 8904]
Length = 154
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
MGLD++ KTPCGF F +Y + ++YISGT LD+R IR D D G+++GRQ+GRGRS
Sbjct: 1 MGLDRHQKTPCGFAFVEYYLHSEAVACLRYISGTKLDERIIRCDLDPGYKEGRQFGRGRS 60
Query: 157 GGQVRDEYRTDYD 169
GGQVRDE+R +YD
Sbjct: 61 GGQVRDEFRQEYD 73
>gi|83315320|ref|XP_730743.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490559|gb|EAA22308.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 199
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 84 ELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDW 143
E ++AGE++ IIMGL + K+PCGFCF ++ +E +V +++ +ILD R IRVD D
Sbjct: 7 EHMNKAGEVENIIMGLHRTEKSPCGFCFVVYKKKEGATQSVNFLNNSILDGRIIRVDEDL 66
Query: 144 GFQDGRQWGRGRSGGQVRDEYRTDYDPD--ILL--LTLLNFMCWSDVVNISFHRTEAFNS 199
G R++GRG++G Q RDE +D D I+L L + + +N + H +N
Sbjct: 67 GIIGKRKYGRGKTGVQKRDERNKHFDEDRPIVLDNLAQQHLITKKRKINNNHHYPNMYNI 126
Query: 200 F 200
+
Sbjct: 127 Y 127
>gi|440292957|gb|ELP86129.1| nuclear cap-binding protein subunit, putative [Entamoeba invadens
IP1]
Length = 191
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 54 TQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFAL 113
T +E E + STT+YVGN+ T++++ LF G++ +IIMG++ ++ CGFCF
Sbjct: 20 TYDEMLEKVTHSTTLYVGNLGPSVTDKELNYLFGEYGDLTRIIMGVNHRNEY-CGFCFVE 78
Query: 114 FYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
+ +RED + A + + T +D + IRVD+D+G+++GR++GRG+ G Q
Sbjct: 79 YKTREDADYAKRALDKTQVDGKFIRVDWDYGYKEGREFGRGKDGEQ 124
>gi|353230583|emb|CCD77000.1| putative 20 kD nuclear cap binding protein [Schistosoma mansoni]
Length = 151
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 34 ASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTE------EQIYELFS 87
AS +K S YRDRR +F ++ +V+ N F E + +
Sbjct: 13 ASFYK-----SPYRDRR-----NDFSTGII---SVFKRNYHFIHREFVFLYSNKFGNYLA 59
Query: 88 RAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD 147
+ +++GL + KTPCGFCF + +R+ E A++YI+ T LDDR IR D+D GF++
Sbjct: 60 EPAKSSALLLGLHRFDKTPCGFCFVEYCTRDGAEMAMRYINKTRLDDRIIRTDWDAGFEE 119
Query: 148 GRQWGRGRSGGQVRDEYRTDYDPD 171
GRQ+GRG VRDE+R DYD +
Sbjct: 120 GRQYGRG-----VRDEFRKDYDAE 138
>gi|219887841|gb|ACL54295.1| unknown [Zea mays]
gi|413923011|gb|AFW62943.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 144
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/40 (92%), Positives = 40/40 (100%)
Query: 131 ILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+LDDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP
Sbjct: 1 MLDDRPIRVDFDWGFEEGRQWGRGRSGGQVRDEYRTDYDP 40
>gi|413923012|gb|AFW62944.1| hypothetical protein ZEAMMB73_103683 [Zea mays]
Length = 52
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/41 (95%), Positives = 39/41 (95%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFAL 113
MSFYTTEEQ YELFSRAGEIKKIIMGLDKNSKTPCGFCF L
Sbjct: 1 MSFYTTEEQAYELFSRAGEIKKIIMGLDKNSKTPCGFCFVL 41
>gi|195635371|gb|ACG37154.1| hypothetical protein [Zea mays]
Length = 58
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 43/49 (87%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
MASLFKD KLSAYRDRRF GTQEE+E L ASTT+Y+GNMSFYTTEEQ
Sbjct: 1 MASLFKDPSKLSAYRDRRFKGTQEEYEATLHASTTLYIGNMSFYTTEEQ 49
>gi|110349727|ref|NP_001036005.1| nuclear cap-binding protein subunit 2 isoform 2 [Homo sapiens]
gi|114591285|ref|XP_001165488.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Pan
troglodytes]
gi|149731243|ref|XP_001501067.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Equus
caballus]
gi|291400457|ref|XP_002716574.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 2
[Oryctolagus cuniculus]
gi|332262222|ref|XP_003280164.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1
[Nomascus leucogenys]
gi|335307413|ref|XP_003360828.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Sus scrofa]
gi|344282447|ref|XP_003412985.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 2
[Loxodonta africana]
gi|345796145|ref|XP_003434133.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 1 [Canis
lupus familiaris]
gi|350591871|ref|XP_003483351.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Sus
scrofa]
gi|395734620|ref|XP_003776447.1| PREDICTED: nuclear cap-binding protein subunit 2 [Pongo abelii]
gi|410970683|ref|XP_003991807.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Felis
catus]
gi|426217650|ref|XP_004003066.1| PREDICTED: nuclear cap-binding protein subunit 2 isoform 2 [Ovis
aries]
Length = 103
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 41 AENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 91
>gi|431918381|gb|ELK17606.1| Nuclear cap-binding protein subunit 2 [Pteropus alecto]
Length = 140
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 78 AENAMRYINGTRLDDRLIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYD 127
>gi|291401400|ref|XP_002717014.1| PREDICTED: nuclear cap binding protein subunit 2, 20kDa isoform 2
[Oryctolagus cuniculus]
Length = 103
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
E+A++YI+GT LDDR IR D+D GF++GRQ+G GRSGGQVRDEYR DYD
Sbjct: 41 AENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGHGRSGGQVRDEYRQDYDA 91
>gi|269860401|ref|XP_002649922.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
gi|220066682|gb|EED44156.1| RNA-binding protein, predicted [Enterocytozoon bieneusi H348]
Length = 135
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K + Y D++FPGT+EE+ L S T+Y+ N+ + EE+++ LF +I+ +IMG+D
Sbjct: 7 KKTTYIDKKFPGTKEEYCNLLGKSKTIYITNIPLHVREERLWNLFGIINDIEHLIMGVD- 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
N GFCF ++ + A+K ++G +D +++D D GF + R++GRG G Q++
Sbjct: 66 NELKFAGFCFIIYKDQIGANTALKLLNGIKIDGVSLQIDKDIGFTEERRYGRGEGGRQMK 125
Query: 162 DEY 164
++Y
Sbjct: 126 EKY 128
>gi|229368112|gb|ACQ59036.1| Nuclear cap-binding protein subunit 2 [Anoplopoma fimbria]
Length = 94
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + + E+ L S T+YVGN+SFY+TE+Q++E+FS++G +K+I++GLDK
Sbjct: 16 VSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYSTEDQVHEIFSKSGGVKRIVIGLDKV 75
Query: 103 SKT 105
KT
Sbjct: 76 KKT 78
>gi|313217067|emb|CBY38251.1| unnamed protein product [Oikopleura dioica]
Length = 395
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 42/47 (89%)
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+++++GT LDDR IR D+D GF +GRQ+GRG++GGQVRDEYRTDYDP
Sbjct: 312 LRWVTGTRLDDRIIRTDWDAGFIEGRQYGRGKTGGQVRDEYRTDYDP 358
>gi|402862019|ref|XP_003895369.1| PREDICTED: nuclear cap-binding protein subunit 2 [Papio anubis]
gi|403268369|ref|XP_003926248.1| PREDICTED: nuclear cap-binding protein subunit 2 [Saimiri
boliviensis boliviensis]
Length = 59
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVRDEYR DYD
Sbjct: 1 MRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDA 47
>gi|162606412|ref|XP_001713236.1| nuclear cap binding protein subunit 2 [Guillardia theta]
gi|12580702|emb|CAC27020.1| nuclear cap binding protein subunit 2 [Guillardia theta]
Length = 97
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+YVG++S E ++ FSR G+IK++I+G++ + PCGFCF ++ + E +
Sbjct: 4 SKTIYVGSLSKKLKENFLWYFFSRLGKIKRLIIGINNKTLLPCGFCFVEYFFDFNFELSF 63
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGR 153
K +SG + + I++D D GF+D RQ R
Sbjct: 64 KVLSGFRIFNHFIKLDKDNGFKDNRQLSR 92
>gi|164662911|ref|XP_001732577.1| hypothetical protein MGL_0352 [Malassezia globosa CBS 7966]
gi|159106480|gb|EDP45363.1| hypothetical protein MGL_0352 [Malassezia globosa CBS 7966]
Length = 160
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
++++SGT LD+R IR D D G++DGRQ+GRGRSGGQVRDEYR +YD
Sbjct: 1 MRFVSGTKLDERVIRCDLDPGYRDGRQYGRGRSGGQVRDEYRQEYD 46
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF TEE + E F+ ++ + + D+ S P GF + F S ED + A
Sbjct: 409 SDTLFVGNLSFNATEESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAF 468
Query: 125 KYISGTILDDRPIRVDF 141
++G+ LD RP+R+DF
Sbjct: 469 NQLNGSNLDGRPVRLDF 485
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T++VGN+ + ++ +YE F I + DK+S+ GF + F S + E A
Sbjct: 304 TATLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAY 363
Query: 125 KYISGTILDDRPIRVDFDWGFQDG-----RQWGRGRSGGQVRDEYRTDYDPDILLLTLLN 179
+G L R +R+DF +G R R R G V + D L + L+
Sbjct: 364 NEKNGAHLQGREMRLDFASKPAEGNDPTTRAAERARKHGDV-----ISPESDTLFVGNLS 418
Query: 180 FMCWSDVVNISFHRTEAFNSF 200
F + V+ F+ A S
Sbjct: 419 FNATEESVSEFFNSVAAVQSL 439
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++G++SF TE+Q+YE F + G+++ + + D+++ P GF + F S ED A+K
Sbjct: 295 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKA 354
Query: 127 ISGTILDDRPIRVDFDWGFQD 147
++G + R IRVDF QD
Sbjct: 355 MNGAEIAGRAIRVDFAPPKQD 375
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF +QIYELFS+ GEI + + ++ P GF + + + D + A
Sbjct: 277 PSDTLFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSA 336
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 337 LDALQGEYIDNRPVRLDF 354
>gi|326431687|gb|EGD77257.1| hypothetical protein PTSG_08350 [Salpingoeca sp. ATCC 50818]
Length = 397
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
+ A T+V+VGN+ + TEE++ + FS G++K + D+N+ GF F F E
Sbjct: 1 MAAPTSVWVGNIPYEATEEELIKFFSAVGDVKNFHLITDQNTGRSKGFGFCYFLDAAAAE 60
Query: 122 DAVKYISGTILDDRPIRVDF 141
AV+ +SG L DRP+RVD
Sbjct: 61 SAVRNLSGQPLRDRPLRVDL 80
>gi|392886215|ref|NP_001250554.1| Protein NCBP-2, isoform c [Caenorhabditis elegans]
gi|345107387|emb|CCD31068.1| Protein NCBP-2, isoform c [Caenorhabditis elegans]
Length = 56
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 132 LDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
+DDR IR D+D GF +GRQ+GRG+ GGQVRDEYR DYDP+
Sbjct: 1 MDDRVIRADWDAGFIEGRQYGRGKHGGQVRDEYRKDYDPE 40
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T+++G++SF TE+Q+YE F + G+++ + + D+++ P GF + F S +D A+
Sbjct: 295 AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAAL 354
Query: 125 KYISGTILDDRPIRVDFDWGFQD 147
K ++G + R IRVDF QD
Sbjct: 355 KAMNGAEIAGRAIRVDFAPPKQD 377
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
++ ++ + R G EE A+T V+VG +S+ + + F GE+ +
Sbjct: 175 EEESIAPAKKARADGGDEE------ATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVV 228
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D++S+ GF + F E + A++ G+ +D R IRV++
Sbjct: 229 FDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNY 270
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T+++G++SF TE+Q+YE F + G+++ + + D+++ P GF + F S +D A+
Sbjct: 292 AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAAL 351
Query: 125 KYISGTILDDRPIRVDFDWGFQD 147
K ++G + R IRVDF QD
Sbjct: 352 KAMNGAEIAGRAIRVDFAPPKQD 374
Score = 37.0 bits (84), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
++ ++ + R G EE A+T V+VG +S+ + + F GE+ +
Sbjct: 172 EEESIAPAKKARADGGDEE------ATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVV 225
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D++S+ GF + F E + A++ G+ +D R IRV++
Sbjct: 226 FDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIRVNY 267
>gi|162454265|ref|YP_001616632.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161164847|emb|CAN96152.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 138
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+SF TT E + F+ AGE+++I M D+ + P GF F S + A+ +
Sbjct: 5 LYVGNLSFSTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGSAQAANSAISQL 64
Query: 128 SGTILDDRPIRVD 140
+G +LD R ++V+
Sbjct: 65 NGAVLDGRALKVN 77
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 52/83 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T+++G++SF TE+Q+YE F + G+++ + + D+++ P GF + F S +D A+
Sbjct: 295 AETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAAL 354
Query: 125 KYISGTILDDRPIRVDFDWGFQD 147
K ++G + R IRVDF QD
Sbjct: 355 KAMNGAEIAGRAIRVDFAPPKQD 377
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF EE + F++ +++ + + D+ S P GF + F S +D + A
Sbjct: 392 SDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAF 451
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G+ LD RP+R+DF
Sbjct: 452 EALNGSDLDGRPVRLDF 468
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
EA S T++VGN+ + + +YE F + + DK+S GF + F + E
Sbjct: 282 EASEKSATLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEA 341
Query: 120 TEDAVKYISGTILDDRPIRVDFDW-----GFQDGRQWGRGRSGGQVRDEYRTDYDPDILL 174
E A +G L R +R+DF + R R R G V + D L
Sbjct: 342 AEKAYNDKNGAFLQGREMRLDFAAKPSADSTPNARAAERARKHGDV-----ISPESDTLF 396
Query: 175 LTLLNFMCWSDVVNISFHRTEAFNSF 200
+ L+F + V+ F++ S
Sbjct: 397 VGNLSFSANEESVSAFFNKVAKVQSL 422
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++G +S+ TTE ++ F R G +K++ + DK++ P G+ F FY +D ++A K+
Sbjct: 97 TLFIGKLSYDTTEHRLQREFERYGPVKRVRLVHDKHTDKPRGYAFVEFYHSQDMKNAYKH 156
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
GT +D+R I VD + G + + W R GG
Sbjct: 157 ADGTKIDNRRILVDVERG-RTVKDWLPKRLGG 187
>gi|302816982|ref|XP_002990168.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
gi|300142023|gb|EFJ08728.1| hypothetical protein SELMODRAFT_7444 [Selaginella moellendorffii]
Length = 124
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+ +TVYV N+ F T +Y +FS+ G++ K+ + D+ ++ G F LF +RED E A
Sbjct: 7 SKSTVYVSNLDFALTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKA 66
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
VK + G +L+ R ++V R++ R
Sbjct: 67 VKAMDGVVLNKRTLKVSIAQDNGRAREFIR 96
>gi|302821717|ref|XP_002992520.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
gi|300139722|gb|EFJ06458.1| hypothetical protein SELMODRAFT_47876 [Selaginella moellendorffii]
Length = 125
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+ +TVYV N+ F T +Y +FS+ G++ K+ + D+ ++ G F LF +RED E A
Sbjct: 8 SKSTVYVSNLDFSLTNSDLYTIFSKMGKVGKVTVMKDRVTRQSKGVAFILFTAREDAEKA 67
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
VK + G +L+ R ++V R++ R
Sbjct: 68 VKAMDGVVLNKRTLKVSIAQDNGRAREFIR 97
>gi|222623228|gb|EEE57360.1| hypothetical protein OsJ_07502 [Oryza sativa Japonica Group]
Length = 91
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/30 (86%), Positives = 30/30 (100%)
Query: 131 ILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+LDDRPIRVDFDWGF++GRQWGRGRSGGQ+
Sbjct: 1 MLDDRPIRVDFDWGFEEGRQWGRGRSGGQM 30
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F S ED++ A
Sbjct: 240 PSDTLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKA 299
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+D+
Sbjct: 300 LESLQGEYIDNRPVRLDY 317
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ + + F++A +++ + + D+ S P GF + F S ED + A
Sbjct: 400 SDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAF 459
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G+ LD RP+R+D+
Sbjct: 460 ETLNGSDLDGRPVRLDY 476
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
EA S+T++VGN+ + + +YE F G + + DK+S GF + F + +
Sbjct: 290 EASEKSSTLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDA 349
Query: 120 TEDAVKYISGTILDDRPIRVDFDW-----GFQDGRQWGRGRSGGQVRDEYRTDYDPDILL 174
E A +G L R +R+DF R R R G V + D L
Sbjct: 350 AEKAYNEKNGAFLQGREMRLDFASKPNADAPPSARAAERARKHGDV-----ISPESDTLF 404
Query: 175 LTLLNFMCWSDVVNISFHRTEAFNSF 200
+ L F D V+ F++ S
Sbjct: 405 VGNLPFSADEDSVSKFFNKAAKVQSL 430
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F S ED++ A
Sbjct: 240 PSDTLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKA 299
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+D+
Sbjct: 300 LESLQGEYIDNRPVRLDY 317
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 53 GTQEEFEEALLAST--TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
GT+EE E+A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF
Sbjct: 4 GTREE-EQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 62
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
F F + +D +DA+ ++G +D R IRVD D R G
Sbjct: 63 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRG 104
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A
Sbjct: 105 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 164
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 165 LDALQGEYIDNRPVRLDF 182
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N++F TT + + +F R GE+ I + D+ S+ GF F FY + D EDA+
Sbjct: 61 VSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDALD 120
Query: 126 YISGTILDDRPIRVDF-DWGFQDGRQWGRGRSGGQ-----VRDEYRTD 167
+ G ILD R +RV +G RGR G VRD+ R D
Sbjct: 121 AMDGRILDGRELRVQMARYGRPSSPYRSRGRRRGDHDQGVVRDQDRED 168
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A
Sbjct: 100 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 159
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 160 LDALQGEYIDNRPVRLDF 177
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
++A S T++VGN+ F E+ ++E+F + G I I + D S P GF + F S E
Sbjct: 296 DQASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVE 355
Query: 119 DTEDAVKYISGTILDDRPIRVDF 141
+ +A ++G +D RP+R+DF
Sbjct: 356 EAREAFNELNGAEIDGRPVRLDF 378
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 38 KDQRKLSAYRD-RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
KD +K A D P + E A AS ++VGN+S+ E + F GE+ +
Sbjct: 166 KDSKKRKAEEDVSATPKKTKTEEPAAGASANLFVGNLSWNVDEAWLQSEFEEFGELSGVR 225
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF---------DWGFQD 147
+ ++++ GF + + + D A + T +D R I +D+ GFQD
Sbjct: 226 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQD 285
Query: 148 GRQWGRGRS-GGQVRDEYRTDYDPDILLLTLLNFMCWSDVVNISF 191
R R RS G Q E D L + + F D ++ F
Sbjct: 286 -RAQARARSFGDQASPES------DTLFVGNIPFSANEDSLHEVF 323
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF +QIYELFS GE+ + + ++ P GF + + S + + A
Sbjct: 335 PSDTLFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKA 394
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+DF
Sbjct: 395 LETLQGEYIDNRPVRLDF 412
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + L+ ++K P GF F F+ R D +DA
Sbjct: 271 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 330
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWGR--GRSGGQVRDEYRT 166
+ G +LD+R +RV +G +D GR WG GR G R +R+
Sbjct: 331 MDGAVLDERELRVRMARYGRRDLPRSSQEEPRGRSWGGRYGRRSGSPRGRHRS 383
>gi|162450147|ref|YP_001612514.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161160729|emb|CAN92034.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 95
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+SF TT E + F+ AGE+++I M D+ + P GF F + + A+ +
Sbjct: 5 LYVGNLSFNTTRETLESAFAAAGEVREIAMPTDRETGQPRGFAFVTMGTAQAANSAISQL 64
Query: 128 SGTILDDRPIRVD 140
+G +LD R ++V+
Sbjct: 65 NGAMLDGRTLKVN 77
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 53 GTQEEFEEALLAS--TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
GT+EE E+A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF
Sbjct: 4 GTREE-EQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 62
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
F F + +D +DA+ ++G +D R IRVD D R RG GG
Sbjct: 63 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 110
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ + ELF G I I + D +S P GF + F S ++ +A
Sbjct: 368 SDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAF 427
Query: 125 KYISGTILDDRPIRVDF 141
++G LD RP+R+DF
Sbjct: 428 NSLNGAELDGRPVRLDF 444
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P ++ EE AS +++GN+S+ E+ + + F GE+ + + D++S GF +
Sbjct: 246 PKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGY 305
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDF----------DWGFQDGRQWGRGRSGGQVR 161
+ S D A K T LD R I +D+ GFQD R R RS G
Sbjct: 306 VEYVSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQQGGGFQD-RAQARARSFGD-- 362
Query: 162 DEYRTDYDPDILLLTLLNFMCWSDVV 187
++ + D L + L F D V
Sbjct: 363 ---QSSPESDTLFVGNLPFSANEDSV 385
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A+
Sbjct: 266 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 325
Query: 125 KYISGTILDDRPIRVDF 141
+ G +D+RP+R+DF
Sbjct: 326 DALQGEYIDNRPVRLDF 342
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A+
Sbjct: 268 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 327
Query: 125 KYISGTILDDRPIRVDF 141
+ G +D+RP+R+DF
Sbjct: 328 DALQGEYIDNRPVRLDF 344
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A+
Sbjct: 270 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKAL 329
Query: 125 KYISGTILDDRPIRVDF 141
+ G +D+RP+R+DF
Sbjct: 330 DALQGEYIDNRPVRLDF 346
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A
Sbjct: 267 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 326
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 327 LDALQGEYIDNRPVRLDF 344
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A
Sbjct: 265 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 324
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 325 LDALQGEYIDNRPVRLDF 342
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
++A S T++VGN+ F E+ ++E+F + G I I + D S P GF + F S E
Sbjct: 381 DQASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVE 440
Query: 119 DTEDAVKYISGTILDDRPIRVDF 141
+ +A ++G +D RP+R+DF
Sbjct: 441 EAREAFNELNGAEIDGRPVRLDF 463
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 38 KDQRKLSAYRD-RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
KD +K A D P + E A AS ++VGN+S+ E + F GE+ +
Sbjct: 251 KDSKKRKAEEDVSATPKKTKTEEPAAGASANLFVGNLSWNVDEAWLQSEFEEFGELSGVR 310
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF---------DWGFQD 147
+ ++++ GF + + + D A + T +D R I +D+ GFQD
Sbjct: 311 IMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQD 370
Query: 148 GRQWGRGRS-GGQVRDEYRTDYDPDILLLTLLNFMCWSDVVNISF 191
R R RS G Q E D L + + F D ++ F
Sbjct: 371 -RAQARARSFGDQASPES------DTLFVGNIPFSANEDSLHEVF 408
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F TTEE + ++FS+ G++ ++++ D+ SK GF F F + ED +DA+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Query: 39 DQRKLSAYRDRRFPGTQEEF-EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
+Q+ A R++R E+F + A S ++VGN+S+ TE+Q++E+F G++K + +
Sbjct: 373 EQKDKGAAREKRA----EKFGDSASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRL 428
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D+ + P GF + F E + A + +SGT + RPIR+D+
Sbjct: 429 PTDRETGRPKGFGYVEFTDIETAKKAFEGLSGTEVAGRPIRLDY 472
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ +++VG +S+ + + + F+ GE+ + +D+N+ GF + F + E E A+
Sbjct: 296 TKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVEAAL 355
Query: 125 KYISGTILDDRPIRVD 140
++G +D RP+ +D
Sbjct: 356 -LLNGKEIDGRPVNID 370
>gi|345489249|ref|XP_001601106.2| PREDICTED: hypothetical protein LOC100116671 [Nasonia vitripennis]
Length = 299
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S T+E+ +Y +FS+ G ++++++ +D +K P GFCF F S ED + A + SG +
Sbjct: 141 LSICTSEQSLYHIFSKYGPVERVVVVIDAKTKRPKGFCFVYFESLEDAKVAKEQCSGMAI 200
Query: 133 DDRPIRVDF 141
D R IRVD+
Sbjct: 201 DGRRIRVDY 209
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 35 SLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
S+ KDQ ++ R R F E S+ ++VGN+SF TEEQ++E+FS G IK
Sbjct: 114 SVEKDQNQVRERRARTFGDAPSE------PSSRLFVGNLSFDATEEQLWEVFSDYGSIKS 167
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ M ++S P GF + F E + A + + G + R IR++F
Sbjct: 168 VHMPTSRDSGRPKGFGYVEFEDIESAKKAHESLVGQEIAGRAIRLEF 214
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P + ++ + T++VG +S+ + F++ GEI + D+N+ GF F
Sbjct: 25 PAQKARVDDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQTDRNTGRSRGFGF 84
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVD 140
F S E + A++ ++G +D R I VD
Sbjct: 85 VTFASPEAVDKALE-LNGKEIDGRSINVD 112
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 13/113 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + L+ ++K P GF F F+ R D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWG--RGRSGGQVRDEYRT 166
+ G +LD+R +RV +G +D GR WG GR G R +R+
Sbjct: 75 MDGAVLDERELRVRMARYGRRDLPRSSQEEPRGRSWGGRYGRRSGSPRGRHRS 127
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+T+++GN+SF +E+ ++ FS GE+ + + D +S P GF + F ++E + A+
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 125 KYISGTILDDRPIRVDF 141
++G L RP+R+DF
Sbjct: 371 DAMTGQELAGRPLRLDF 387
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 11/108 (10%)
Query: 34 ASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIK 93
A ++ + S Y D+R P S T+++GN+SF + ++ELFS+ G +
Sbjct: 208 APAARNNDRASQYGDKRSP-----------PSDTLFLGNLSFQADRDTLFELFSKHGNVT 256
Query: 94 KIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ + ++ P GF + F S ++ A++ ++G +D+RPIR+D+
Sbjct: 257 SVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYVDNRPIRLDY 304
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K SA P + + EE TT++VG +S+ +E + + F G + + +++
Sbjct: 106 KRSAEESEEEPAKKAKTEEI----TTLFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMER 161
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ G+ + F ++ E A++ + G +D RPI VD
Sbjct: 162 ATGRSRGYGYVDFDNKASAEKALEEMQGKEIDGRPINVDM 201
>gi|384487646|gb|EIE79826.1| nuclear cap-binding protein subunit 2 [Rhizopus delemar RA 99-880]
Length = 194
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 122 DAVKYISGTIL-DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
+ K++ ++L ++R IR D D GF++GRQ+GRG+SGGQVRDEYRT+YD
Sbjct: 62 ETKKHLVDSVLWNERIIRCDLDPGFKEGRQFGRGKSGGQVRDEYRTEYD 110
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 35 SLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTV-YVGNMSFYTTEEQIYELFSRAGEIK 93
S+ KDQ ++ R+RR + F +A A ++V +VGN+SF TE+Q++E+FS G +K
Sbjct: 384 SVEKDQNQV---RERRA----KAFGDATSAPSSVLFVGNLSFDATEDQLWEVFSDYGSVK 436
Query: 94 KIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ M D+ S P GF + F E + A + ++G + R +R+DF
Sbjct: 437 SVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGLAGQEIAGRAVRLDF 484
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 64 AST-TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
AST T++VG +S+ + + F+ GE+ + +D+N+ GF F F S E +
Sbjct: 306 ASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDK 365
Query: 123 AVKYISGTILDDRPIRVD 140
A++ ++G +D RPI +D
Sbjct: 366 ALE-LNGKEIDGRPINID 382
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 37 FKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
F + R +A R+R Q ++A S T+++GN+SF E I E FS G I +
Sbjct: 336 FANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSILGVR 395
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD 147
+ D S P GF + F S ++ A + ++G L RP+R+DF Q+
Sbjct: 396 LPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 446
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+T+++GN+SF +E+ ++ FS GE+ + + D +S P GF + F ++E + A+
Sbjct: 301 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 360
Query: 125 KYISGTILDDRPIRVDF 141
++G L RP+R+DF
Sbjct: 361 DAMTGQELAGRPLRLDF 377
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 37 FKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
F + R +A R+R Q ++A S T+++GN+SF E I E FS G I +
Sbjct: 334 FANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSILGVR 393
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD 147
+ D S P GF + F S ++ A + ++G L RP+R+DF Q+
Sbjct: 394 LPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQN 444
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+T+++GN+SF +E+ ++ FS GE+ + + D +S P GF + F ++E + A+
Sbjct: 305 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAL 364
Query: 125 KYISGTILDDRPIRVDF 141
++G L RP+R+DF
Sbjct: 365 DAMTGQELAGRPLRLDF 381
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN++F T++ +YELF GE+ + + D++S P GF + F E A+
Sbjct: 371 SATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETASKAL 430
Query: 125 KYISGTILDDRPIRVDF 141
+ GT + R IR+DF
Sbjct: 431 NELGGTDFEGRNIRLDF 447
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+++VG +S+ +E + F+ AGE+ + +D+ + GF + F + AV+
Sbjct: 273 SIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVET 332
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILLLTLLNFMCWSDV 186
++G +D RP+ +D R ++ G R E L + L F D
Sbjct: 333 MNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSRSEPSA-----TLFVGNLAFSATQDA 387
Query: 187 V 187
V
Sbjct: 388 V 388
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTEE + E F++ G I K+ + DK + GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 128 SGTILDDRPIRVD---------FDWGFQDGR-QWGRG-RSGGQVRDEY 164
+G +D R IRVD G++D R Q G G RSGG RD Y
Sbjct: 67 NGKSVDGRTIRVDEAGKGGGRSGGGGYRDNRGQGGYGDRSGGSYRDSY 114
>gi|116192351|ref|XP_001221988.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
gi|88181806|gb|EAQ89274.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
Length = 361
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ +++GN+ + TT+ ++ +F G +K + + +D+ + P GF A F S E DA
Sbjct: 230 TAQLFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADFPSVEAAIDAK 289
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
+ + G L+DR +R+DF G++ G+ GR G RD
Sbjct: 290 QRLEGAKLNDRLLRIDFAQGYRRGQDGAEGR--GPRRD 325
>gi|388583458|gb|EIM23760.1| hypothetical protein WALSEDRAFT_53459 [Wallemia sebi CBS 633.66]
Length = 306
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
LL S V+VGN+ + EE++ +FS G +K M DK++ P G+ F +Y +
Sbjct: 8 LLGSKIVFVGNLPYDINEEEVVRIFSEVGPVKDFRMNFDKHTGKPKGYGFVEYYDGDTAA 67
Query: 122 DAVKYISGTILDDRPIRVDF 141
AV+ + + RP+RVD
Sbjct: 68 SAVRNLHDNPVGGRPLRVDL 87
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + IYE+FS+ GEI + + ++ P GF + + + +D + A
Sbjct: 286 PSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKA 345
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+D+
Sbjct: 346 LDALQGEYIDNRPVRLDY 363
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 52 PGTQEEFE---EALLAST--TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
PG ++F +A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++
Sbjct: 8 PGGPQDFNGLPQATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRS 67
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F F + +D +DA+ ++G +D R IRVD
Sbjct: 68 RGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 101
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + +YE+F + GEI + + ++ P GF + + + ED + A
Sbjct: 248 PSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKA 307
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G ++DRP+R+DF
Sbjct: 308 LDALQGESINDRPVRLDF 325
>gi|341889641|gb|EGT45576.1| hypothetical protein CAEBREN_06918 [Caenorhabditis brenneri]
Length = 348
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ TE+ I +FS+AG + I M D+ + P G+ F F + + A++
Sbjct: 18 SVFVGNISYDVTEDTIRAMFSKAGPVMSIKMVHDRETGKPKGYGFIEFPDIQTADTAIRV 77
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G L R +RVD G + ++G+ +G + +E Y P+
Sbjct: 78 LNGHELGGRILRVDSAAGGMNMEEFGQPNAGPAIVEE--NPYGPE 120
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I E+FS+ GEI + + ++ P GF + + + ED + A
Sbjct: 263 PSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKA 322
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 323 LDALQGEYIDNRPVRLDF 340
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ + F+ +++ + + D S P GF + FYS +D ++A
Sbjct: 316 SDTLFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAF 375
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G +D RP+R+DF
Sbjct: 376 EQLNGADIDGRPVRLDF 392
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + IYE+F + GEI + + ++ P GF + + S +D + A
Sbjct: 275 PSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKA 334
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+D+
Sbjct: 335 LEALQGEYIDNRPVRLDY 352
>gi|162455777|ref|YP_001618144.1| RNA-binding protein [Sorangium cellulosum So ce56]
gi|161166359|emb|CAN97664.1| RNA-binding protein [Sorangium cellulosum So ce56]
Length = 107
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+S+ T+ E + F+ +GE++++ M D+ + P GF F S ++ A+ +
Sbjct: 5 LYVGNLSYNTSRESLEAAFAGSGEVREVAMPTDRETGQPRGFAFVTMGSAQEANSAISQL 64
Query: 128 SGTILDDRPIRVD 140
+G +LD R ++V+
Sbjct: 65 NGMMLDGRSLKVN 77
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
++A S T++VGN+ F E+ + ELF ++G I I + D S P GF + F S +
Sbjct: 388 DQASPESDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVD 447
Query: 119 DTEDAVKYISGTILDDRPIRVDF 141
+ A ++G L+ RP+R+DF
Sbjct: 448 EARQAFNDLNGAELNGRPVRLDF 470
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 18/147 (12%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
EEA AS ++VGN+S+ EE + + F GE+ + + D++S GF + + S
Sbjct: 279 EEASGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAA 338
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWG----------FQDGRQWGRGRS-GGQVRDEYRTD 167
D A T +D R I +D+ G QD R R R+ G Q E
Sbjct: 339 DAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNNNNQD-RAQARARNFGDQASPES--- 394
Query: 168 YDPDILLLTLLNFMCWSDVVNISFHRT 194
D L + + F D V+ F ++
Sbjct: 395 ---DTLFVGNIPFSANEDSVSELFGQS 418
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
STTV+VGN+++ T+EEQ+ E+ S+ G I + D+ + P G+ F + E A+
Sbjct: 4 STTVFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAI 63
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGR 153
+ ++GT L+ R +RVD D R+ G+
Sbjct: 64 RNLNGTELNGRTLRVDL--ADSDKRELGQ 90
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|328706280|ref|XP_003243050.1| PREDICTED: hypothetical protein LOC100168472 isoform 2
[Acyrthosiphon pisum]
Length = 297
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE Q+Y++F++ G I KI++ +D S GF FA F ED + A + SG +
Sbjct: 111 LSVYTTEHQLYDIFAKYGSIDKILIIIDAKSGRSRGFGFAYFKKHEDAKVAKEECSGMEI 170
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 171 DGRRIRVDF 179
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + L+ ++K P GF F F+ R D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWG 152
+ G +LD+R +RV +G +D GR WG
Sbjct: 75 MDGAVLDERELRVRMARYGRRDLPRSSQEEPRGRSWG 111
>gi|168016155|ref|XP_001760615.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688312|gb|EDQ74690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+ +TVYV N+ F T ++ +FS G+I K+ + DK ++ G F L+ SR+D A
Sbjct: 17 SKSTVYVSNLDFSLTNNDLHTIFSTFGKIGKVTIVKDKQTRESKGVAFILYASRDDAHAA 76
Query: 124 VKYISGTILDDRPIRVDF 141
VK ++G IL+ R ++V
Sbjct: 77 VKTMNGKILNKRTLKVSI 94
>gi|328706282|ref|XP_001944825.2| PREDICTED: hypothetical protein LOC100168472 isoform 1
[Acyrthosiphon pisum]
Length = 297
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE Q+Y++F++ G I KI++ +D S GF FA F ED + A + SG +
Sbjct: 111 LSVYTTEHQLYDIFAKYGSIDKILIIIDAKSGRSRGFGFAYFKKHEDAKVAKEECSGMEI 170
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 171 DGRRIRVDF 179
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF + ++ELFS+ G + + + S P GF + + S E+ + A+
Sbjct: 267 SDTLFLGNLSFNADRDALFELFSKHGNVISVRIPTHPESNQPKGFGYVQYGSVEEAQAAL 326
Query: 125 KYISGTILDDRPIRVDF 141
+ G +D+RP+R+DF
Sbjct: 327 DALQGEYIDNRPVRIDF 343
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I ELFS+ GEI + + ++ P GF + + + ED + A
Sbjct: 260 PSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKA 319
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+D+
Sbjct: 320 LEGLQGEYIDNRPVRLDY 337
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN F TTEEQI + FS G++ + + D+ + P GF F F + AV+
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 127 ISGTILDDRPIRVD 140
++G + R +RV+
Sbjct: 66 LNGADFNGRQLRVN 79
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN+ F TTEEQ++E+FS AG I I + LD + P GF F + A++ +
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
+G + R +RV+F G + RG Q
Sbjct: 71 NGYDCNGRLLRVNFSNNSSLGAEQQRGEKAPQ 102
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 54 TQEEFEEALLAS--TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
+Q +A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F
Sbjct: 39 SQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 98
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
F + +D +DA+ ++G +D R IRVD D R G
Sbjct: 99 VTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRG 139
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA++ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|429860568|gb|ELA35298.1| hlh transcription factor [Colletotrichum gloeosporioides Nara gc5]
Length = 785
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T+Y+GN+SF T+ ++ ELF +K + + +DK + P GF A F+S E ++A
Sbjct: 664 TDTLYIGNLSFEATDAELNELFGVFQNVKDVRVAVDKMTGWPRGFAHAQFHSVEAAQEAR 723
Query: 125 KYISGTILDDRPIRVDF 141
I G +L R +RV+F
Sbjct: 724 AAIEGKVLRGREVRVNF 740
>gi|294951822|ref|XP_002787139.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
gi|239901796|gb|EER18935.1| nucleolar protein, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S +V+VGN+ + T++ +YE+F G I + M D+ + P GF + F + + E+A
Sbjct: 616 SASVFVGNLPWSMTQDWLYEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAENAT 675
Query: 125 KYISGTILDDRPIRVDFD 142
K +SGT L+ R IRV+++
Sbjct: 676 K-LSGTDLEGRQIRVNYN 692
Score = 45.1 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
+E++ S +V++GN+ F T+E + ++FS G+I+++ + D S GF F F +
Sbjct: 505 QESVERSKSVFIGNLPFSMTKEWLEQIFSWCGDIERVSIPTDWESGKIKGFAFLDFADED 564
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQD 147
E AV +G + R +R+++ + D
Sbjct: 565 SAEKAVGK-NGEDCEGRDLRINYSFPKND 592
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++F + G+I ++++ D+ +K GF F F + ED +DA++ +
Sbjct: 9 LFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEAM 68
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 69 NGKSVDGRQIRVD 81
>gi|340721187|ref|XP_003399006.1| PREDICTED: hypothetical protein LOC100646189 [Bombus terrestris]
gi|350399376|ref|XP_003485504.1| PREDICTED: hypothetical protein LOC100743964 [Bombus impatiens]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S +TTE+QI+ +FS+ G ++++ + +D + GFCF F S ED + A + +G +
Sbjct: 145 LSIFTTEQQIHHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFESSEDAKVAKEQCTGMDI 204
Query: 133 DDRPIRVDFD---------WGFQDGRQ---WGRGRSGGQVRDEYRTDY 168
D R IRVDF G G+ RG G + RD YR Y
Sbjct: 205 DGRRIRVDFSITQRAHTPTPGIYMGKPTHLHDRGWDGPRRRDSYRGSY 252
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA++ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTE+ + E FS+ G I K + +D+ + P GF F + + ED +DA+ +
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRV+
Sbjct: 67 NGQSLDGRTIRVN 79
>gi|195608818|gb|ACG26239.1| hypothetical protein [Zea mays]
gi|413950234|gb|AFW82883.1| hypothetical protein ZEAMMB73_753605 [Zea mays]
gi|413950235|gb|AFW82884.1| hypothetical protein ZEAMMB73_753605 [Zea mays]
gi|413950236|gb|AFW82885.1| hypothetical protein ZEAMMB73_753605 [Zea mays]
Length = 45
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/29 (82%), Positives = 27/29 (93%)
Query: 131 ILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
+LDDRPIRVDFD GF++GRQWGRGRSG Q
Sbjct: 1 MLDDRPIRVDFDRGFEEGRQWGRGRSGVQ 29
>gi|88813641|ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88789097|gb|EAR20234.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 96
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++YVGN+ F +E++I +LF++ GE+ ++ + D+++ P GF F D + A++
Sbjct: 4 SIYVGNLPFTASEDEIRDLFAQYGEVNEVRLITDRDTGRPRGFGFVRMAP-ADADAAIEA 62
Query: 127 ISGTILDDRPIRVDFDWGFQD--GRQWGRG 154
++GT LD R +R++ Q+ RQ GRG
Sbjct: 63 LNGTELDGRALRINEAQERQERRPRQPGRG 92
>gi|268563939|ref|XP_002647049.1| C. briggsae CBR-CPF-2 protein [Caenorhabditis briggsae]
Length = 335
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ TEE I ++F++AG + I M D+ + P G+ F F + A++
Sbjct: 13 SVFVGNISYDVTEETIRQIFTKAGHVLSIKMVHDRETGKPKGYGFIEFPDIATADTAIRV 72
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G L R +RVD G + ++G +G + +E Y P+
Sbjct: 73 LNGYELGGRVLRVDSAAGGMNMEEFGSSNNGPAIVEE--NPYGPE 115
>gi|261197860|ref|XP_002625332.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595295|gb|EEQ77876.1| nucleic acid-binding protein [Ajellomyces dermatitidis SLH14081]
gi|327355588|gb|EGE84445.1| hypothetical protein BDDG_07390 [Ajellomyces dermatitidis ATCC
18188]
Length = 301
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 35 SLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
SL++ +R + Y R G+ E A + T+++GN+SF T+ ++ E+F +K
Sbjct: 150 SLYEGRRIVVNYSTR---GSTEPKTRATGPTKTLFIGNLSFEMTDRELNEMFKDIPNVKD 206
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
+ + +DK + P GF A F E + ++ + RP+R+DF +D + RG
Sbjct: 207 VRVSVDKRTGRPRGFAHADFLDVESAQAGMELLKDKAPYGRPLRIDFSLNTRDTPGYRRG 266
>gi|307178838|gb|EFN67401.1| Splicing factor, arginine/serine-rich 10 [Camponotus floridanus]
Length = 243
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S +TTE+QI+ +FS+ G ++++ + +D + GFCF F S ED + A + +G +
Sbjct: 142 LSIFTTEQQIHHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFESSEDAKVAKEQCTGMDI 201
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 202 DGRRIRVDF 210
>gi|350296577|gb|EGZ77554.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 356
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGNM F E + + F+ + + + D+ S P GF + F S ED ++A
Sbjct: 211 SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAF 270
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G+ L+ RP+R+D+
Sbjct: 271 EQLNGSDLNGRPVRLDY 287
>gi|336464486|gb|EGO52726.1| hypothetical protein NEUTE1DRAFT_91358 [Neurospora tetrasperma FGSC
2508]
Length = 356
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGNM F E + + F+ + + + D+ S P GF + F S ED ++A
Sbjct: 211 SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAF 270
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G+ L+ RP+R+D+
Sbjct: 271 EQLNGSDLNGRPVRLDY 287
>gi|157113379|ref|XP_001657804.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108877794|gb|EAT42019.1| AAEL006416-PA [Aedes aegypti]
Length = 261
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 57 EFEE--ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E++E A+LA V N++ YTTE ++Y++F++ G +KK + LD + GF F F
Sbjct: 74 EYDESKAVLA-----VFNLNIYTTESELYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYF 128
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDF 141
S ED A +G + DRPIRVD+
Sbjct: 129 ESTEDARVAHTQANGIEIGDRPIRVDY 155
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ + ELF ++G I I + D S P GF + F S ++ A
Sbjct: 407 SDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAF 466
Query: 125 KYISGTILDDRPIRVDF 141
++G L+ RP+R+DF
Sbjct: 467 NDLNGAELNGRPVRLDF 483
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
EEA AS ++VGN+S+ EE + + F GE+ + + D++S GF + + +
Sbjct: 295 EEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAA 354
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD-EYRTDYDPDILLLTL 177
D A T +D R I +D+ G + R+ + R+ +T + D L +
Sbjct: 355 DAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGN 414
Query: 178 LNFMCWSDVVNISFHRT 194
+ F D V+ F ++
Sbjct: 415 IPFSANEDSVSELFGQS 431
>gi|307200669|gb|EFN80772.1| Splicing factor, arginine/serine-rich 10 [Harpegnathos saltator]
Length = 164
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S + V +S +TTE+QI+ +FS+ G ++++ + +D + GFCF F S ED + A
Sbjct: 16 PSRCLGVFGLSIFTTEQQIHHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFGSSEDAKVA 75
Query: 124 VKYISGTILDDRPIRVDF 141
+ +G +D R IRVDF
Sbjct: 76 KEQCTGMEIDGRRIRVDF 93
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ + ELF ++G I I + D S P GF + F S ++ A
Sbjct: 407 SDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAF 466
Query: 125 KYISGTILDDRPIRVDF 141
++G L+ RP+R+DF
Sbjct: 467 NDLNGAELNGRPVRLDF 483
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
EEA AS ++VGN+S+ EE + + F GE+ + + D++S GF + + +
Sbjct: 295 EEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSRGFGYVEYVNAA 354
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD-EYRTDYDPDILLLTL 177
D A T +D R I +D+ G + R+ + R+ +T + D L +
Sbjct: 355 DAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGDQTSPESDTLFVGN 414
Query: 178 LNFMCWSDVVNISFHRT 194
+ F D V+ F ++
Sbjct: 415 IPFSANEDSVSELFGQS 431
>gi|157121121|ref|XP_001659835.1| RNA and export factor binding protein 2-I, putative [Aedes aegypti]
gi|108874699|gb|EAT38924.1| AAEL009222-PA [Aedes aegypti]
Length = 273
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 57 EFEE--ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E++E A+LA V N++ YTTE ++Y++F++ G +KK + LD + GF F F
Sbjct: 85 EYDESKAVLA-----VFNLNIYTTESELYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYF 139
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDF 141
S ED A +G + DRPIRVD+
Sbjct: 140 ESTEDARVAHTQANGIEIGDRPIRVDY 166
>gi|449456227|ref|XP_004145851.1| PREDICTED: THO complex subunit 4-like [Cucumis sativus]
Length = 286
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 18 RHCFISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEE-------FEEALLAS----- 65
R I S+ G L A + SAY R+ P + FE++L AS
Sbjct: 41 RGVVIGSVRRGPLGINA-------RASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGI 93
Query: 66 ---TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
T +YV N+ + T+E I ELFS G++K+ + DKN + P G ++ R D
Sbjct: 94 QIGTKLYVSNLDYGVTKEDIKELFSEIGDVKRFAIHYDKNGR-PSGSAEVVYTRRSDAFA 152
Query: 123 AVKYISGTILDDRPIRVDF 141
A+K + +LD +P++++
Sbjct: 153 ALKRYNNVLLDGKPMKIEM 171
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF ++ IYE FS+ GEI + + ++ P GF + F + ED + A
Sbjct: 268 PSDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKA 327
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+R +R+D+
Sbjct: 328 LEGLQGEYIDNRAVRLDY 345
>gi|157121123|ref|XP_001659836.1| RNA and export factor binding protein 2-I, putative [Aedes aegypti]
gi|108874700|gb|EAT38925.1| AAEL009222-PB [Aedes aegypti]
Length = 272
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 57 EFEE--ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E++E A+LA V N++ YTTE ++Y++F++ G +KK + LD + GF F F
Sbjct: 85 EYDESKAVLA-----VFNLNIYTTESELYDVFTKFGPLKKATIVLDAKTGRSRGFGFVYF 139
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDF 141
S ED A +G + DRPIRVD+
Sbjct: 140 ESTEDARVAHTQANGIEIGDRPIRVDY 166
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST +YVGN+ F TE ++ ++F++ G + + + +DK S P GF F ++E + AV
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 125 KYISGTILDDRPIRVD 140
+ ++GT RP+ V+
Sbjct: 62 QALNGTDFGGRPLTVN 77
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 49/78 (62%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+E+FS+ GEI + + ++ P GF + + + +D + A
Sbjct: 257 PSETLFLGNLSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKA 316
Query: 124 VKYISGTILDDRPIRVDF 141
++ + G +D+RP+R+D+
Sbjct: 317 LEALQGEYIDNRPVRLDY 334
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+T ++VG +SFYTTE+ + E FSR GE+ ++ + +D+ S+ GF F + S D E A
Sbjct: 30 VTTKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERA 89
Query: 124 VKYISGTILDDRPIRVD 140
++G +L R I VD
Sbjct: 90 KAEMNGKVLSGRIIFVD 106
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGNM F E + + F+ + + + D+ S P GF + F S ED ++A
Sbjct: 283 SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAF 342
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G+ L+ RP+R+D+
Sbjct: 343 EQLNGSDLNGRPVRLDY 359
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF T++ + E+F G I + + D+ + P GF + F S E+ + A+
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G + RPIR+D+
Sbjct: 420 ENLTGVDIAGRPIRLDY 436
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E A+ ++VGN+S+ EE + F G IK + + D++S G+ + F S +D
Sbjct: 247 EDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADD 306
Query: 120 TEDAVKYISGTILDDRPIRVDFDWG---FQDGRQWGRGRSGGQVRDEYRTDYDPD-ILLL 175
A++ G LD+R +RVD DG Q + RS + + T P L +
Sbjct: 307 AAKALEARHGYTLDNRELRVDLGTPRAQRNDG-QTPQQRSNDRQKQYGDTPSQPSATLFV 365
Query: 176 TLLNFMCWSDVVNISFHRTEAFNSFG 201
++F D+V TE F +G
Sbjct: 366 GNISFDATQDMV------TEVFQEYG 385
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++F T EE + ++FS+ G+I ++++ D+ +K GF F F + +D +DA+ +
Sbjct: 7 LFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKAVDGRQIRVD 79
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 23 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 AMDGRMLDGRELRV 96
>gi|328952775|ref|YP_004370109.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM 11109]
gi|328453099|gb|AEB08928.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM 11109]
Length = 97
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S +YVGN+SF TEEQ+ LFS AG + + D+ + P GF F ++ + A+
Sbjct: 2 SMKLYVGNLSFEMTEEQLGTLFSEAGPVTSAKIITDRQTGQPRGFGFVEMETKSEGRKAI 61
Query: 125 KYISGTILDDRPIRVD 140
++G +D RP+ V+
Sbjct: 62 SMLNGRTVDGRPLAVN 77
>gi|346978399|gb|EGY21851.1| hypothetical protein VDAG_03291 [Verticillium dahliae VdLs.17]
Length = 149
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+TTV+VGN+S+ T++ + +F +++ I + D+N+ P G+ A F+S E A+
Sbjct: 38 TTTVFVGNISYEATDKDLNSVFGALEDVRSIRIATDRNTGWPIGYAHADFHSVEAATKAI 97
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+ + R +RV F QD R R GG
Sbjct: 98 DVLKAQKIGGRSLRVSFASQTQDAVNRRRAREGG 131
>gi|17508585|ref|NP_493022.1| Protein R09B3.2 [Caenorhabditis elegans]
gi|3879015|emb|CAB03236.1| Protein R09B3.2 [Caenorhabditis elegans]
Length = 83
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN F TTEE++ FS G+I + + D+ + P GF F F + AV+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 127 ISGTILDDRPIRVDF 141
++G + RP+RV+
Sbjct: 66 MNGAEFNGRPLRVNL 80
>gi|239607722|gb|EEQ84709.1| nucleic acid-binding protein [Ajellomyces dermatitidis ER-3]
Length = 153
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 35 SLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
SL++ +R + Y R G+ E A + T+++GN+SF T+ ++ E+F +K
Sbjct: 2 SLYEGRRIVVNYSTR---GSTEPKTRATGPTKTLFIGNLSFEMTDRELNEMFKDIPNVKD 58
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
+ + +DK + P GF A F E + ++ + RP+R+DF +D + RG
Sbjct: 59 VRVSVDKRTGRPRGFAHADFLDVESAQAGMELLKDKAPYGRPLRIDFSLNTRDTPGYRRG 118
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++F + G+I ++++ D+ ++ GF F F + ED +DA++ +
Sbjct: 9 LFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEAM 68
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 69 NGKSVDGRQIRVD 81
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF ++ ++E FS GE+K + + D+ S P GF + F E + A
Sbjct: 432 SATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAH 491
Query: 125 KYISGTILDDRPIRVDF 141
+ G LD R +R+DF
Sbjct: 492 AAMQGVELDGRSVRLDF 508
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 23 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 AMDGRMLDGRELRV 96
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 23 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 AMDGRMLDGRELRV 96
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 23 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 AMDGRMLDGRELRV 96
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 60 EALLAS--TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSR 117
+A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F +
Sbjct: 25 QAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 84
Query: 118 EDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+D +DA+ ++G +D R IRVD D R G
Sbjct: 85 DDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRG 119
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 24 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 83
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 84 AMDGRMLDGRELRV 97
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF TTEE + E F++ G I K+ + DK + GF F + + ED +DA++ +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKSVDGRTIRVD 79
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 26 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 85
Query: 127 ISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 86 MDGRMLDGRELRV 98
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
Q++ S + D++ P S TV++GN+SF TE+ + FS GEI+ + +
Sbjct: 295 QQRASNFGDKQSP-----------PSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPT 343
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKY---ISGTILDDRPIRVDF 141
D NS P GF + F D+ DA K ++G + RP R+DF
Sbjct: 344 DMNSGRPKGFGYVTF----DSIDAAKQCVEMNGHFIAGRPCRLDF 384
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT + + +F R GE+ I + D++++ GF F FY + D EDA+
Sbjct: 16 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDA 75
Query: 127 ISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 76 MDGRMLDGRELRV 88
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 24 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 83
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 84 AMDGRMLDGRELRV 97
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A+ ++YVG++ EEQ+Y+LFS+ +I I + D+ ++ G+ + F + +D +A
Sbjct: 33 ANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNA 92
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
++ ++ T L+ +PIR+ F R+ G G
Sbjct: 93 MELLNFTPLNGKPIRIMFSQRDPSIRKSGHG 123
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T VYV N+S T+E + +LF G I + D N K+ C F F F + + AV+
Sbjct: 214 TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRC-FGFVNFQNPDSAAAAVE 272
Query: 126 YISGTILDD 134
++GT +++
Sbjct: 273 RLNGTTINN 281
>gi|356537904|ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
Length = 298
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 44 SAYRDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
S R R FP + FE++L A+ T +YV N+ T E I ELFS GE+K+
Sbjct: 86 SIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRF 145
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ DKN P G ++ R D A+K + +LD +P++++
Sbjct: 146 AVHYDKNGH-PSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEI 190
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 20 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 79
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 80 AMDGRMLDGRELRV 93
>gi|290988331|ref|XP_002676875.1| predicted protein [Naegleria gruberi]
gi|284090479|gb|EFC44131.1| predicted protein [Naegleria gruberi]
Length = 260
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM-GLDKNSK-TPCGFCFALFYSREDTE 121
S T++VGN+ + T+EEQI E+F + G I ++ M +DK K + +CF + D+E
Sbjct: 58 TSRTLFVGNIPYETSEEQIREIFDKFGPIIRVAMCSMDKKKKESGYAYCFVEYEILRDSE 117
Query: 122 DAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
DA + + + +R I++D+D+G + R+ G R G
Sbjct: 118 DAFEKLKDYKIGERTIKLDYDYGRKQ-RRGGSSRGG 152
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T EE + E F + G I+K+ + DK + GF F + S ED +DA+ +
Sbjct: 7 LFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGKSLDGRAIRVD 79
>gi|357610129|gb|EHJ66837.1| transformer 2 isoform D [Danaus plexippus]
Length = 265
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E S + V +S YTTE+QI+ +FS+ G + K+ + +D + GFCF F S++D
Sbjct: 100 ENPTPSRCLGVFGLSLYTTEQQIHHIFSKFGPVDKVQVVIDAKTGRSRGFCFVYFESQDD 159
Query: 120 TEDAVKYISGTILDDRPIRVDF 141
+ A +G +D R IRVD+
Sbjct: 160 AKVAKNECTGMEIDGRRIRVDY 181
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 83
Query: 127 ISGTILDDRPIRVDF 141
+ G +LD R +RV
Sbjct: 84 MDGRMLDGRELRVQM 98
>gi|147860765|emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
Length = 348
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYE 84
M+ + + L + R + P + FE++L A+ T +Y+ N+ + T E I E
Sbjct: 84 MSGIPPRRGPLRSSRRTKIPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRE 143
Query: 85 LFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
LFS G+IK+ + +KN + P G ++ R D AVK + +LD +P++++
Sbjct: 144 LFSEIGDIKRYAVHYEKNGR-PSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEI 199
>gi|356569696|ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
Length = 298
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 44 SAYRDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYELFSRAGEIKKI 95
S R R FP + FE++L A+ T +YV N+ T E I ELFS GE+K+
Sbjct: 85 SIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRF 144
Query: 96 IMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ DKN P G ++ R D A+K + +LD +P++++
Sbjct: 145 AVHYDKNGH-PSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEI 189
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T ++V +SFYTT+EQ+ +LFS G + + + LD +K P GF F F S + E A K
Sbjct: 7 TKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACK 66
Query: 126 YISGTILDDRPIRVD 140
++G I++ R I V+
Sbjct: 67 AMNGRIVNGRLILVE 81
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T EE + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 70 VGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISG 129
V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++ + G
Sbjct: 50 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDG 109
Query: 130 TILDDRPIRVDF 141
+LD R +RV
Sbjct: 110 RMLDGRELRVQM 121
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT + + +F R GE+ I + D++++ GF F FY + D EDA+
Sbjct: 23 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDA 82
Query: 127 ISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 MDGRMLDGRELRV 95
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 37 FKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
F R +A +DR Q + S T++VGN+SF E+ + E F G + +
Sbjct: 267 FSTPRDNAAPKDRANARAQTYGDAKNPESDTLFVGNISFEANEDMLGEAFGAHGTVVNVR 326
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ D +S P GF + F S ED ++A++ + G + RP+R+D+
Sbjct: 327 LPTDMDSGNPKGFGYITFSSVEDAKNAMENMMGADVGGRPVRLDY 371
>gi|312371089|gb|EFR19353.1| hypothetical protein AND_22660 [Anopheles darlingi]
Length = 290
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 70 VGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISG 129
V N+S YTTE ++Y++FS+ G ++K + LD + GF F F S ED + A +G
Sbjct: 83 VFNLSIYTTEAELYDIFSKFGPVRKTTVVLDAKTGRSRGFGFVYFESAEDAKIAHDQANG 142
Query: 130 TILDDRPIRVDF 141
+ DR IRVDF
Sbjct: 143 IEIGDRRIRVDF 154
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 57.4 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L +T++YVG++ T+ Q+YELFS+AG++ + + D NS+ G+ + F + D
Sbjct: 34 LPTTSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAAR 93
Query: 123 AVKYISGTILDDRPIRV 139
A++ ++ L+++PIRV
Sbjct: 94 ALEMLNFVPLNNKPIRV 110
Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RRF + ++ + +Y+ N+ +++Q+ ELFS G+I + D+N + G
Sbjct: 303 RRFEQSMKDAADKY-QGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSK-G 360
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
F F +RE+ A+ ++G +L +P+ V F
Sbjct: 361 SGFVAFSTREEASQAITEMNGKMLSGKPLYVAF 393
Score = 40.4 bits (93), Expect = 0.52, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+V N+S TT+E + ++FS G I ++ + + K+ C F F F S +D AV+ +
Sbjct: 218 VFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSRC-FGFINFESPDDAVRAVEEL 276
Query: 128 SGTILDDR 135
+G ++D+
Sbjct: 277 NGKKINDK 284
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 60 EALLAST--TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSR 117
+A +AS ++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F +
Sbjct: 29 KAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENI 88
Query: 118 EDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+D +DA+ ++G +D R IRVD D R G
Sbjct: 89 DDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRG 123
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGNM F E + + F+ + + + D+ S P GF + F S ED ++A
Sbjct: 270 SDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAF 329
Query: 125 KYISGTILDDRPIRVDF 141
++G+ L RP+R+D+
Sbjct: 330 DQLNGSDLQGRPVRLDY 346
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGRLLDGRELRV 87
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGRLLDGRELRV 87
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGNM F E + + F+ + + + D+ S P GF + F S ED ++A
Sbjct: 270 SDTLFVGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAF 329
Query: 125 KYISGTILDDRPIRVDF 141
++G+ L RP+R+D+
Sbjct: 330 DQLNGSDLQGRPVRLDY 346
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+TV++GN+S+ T E+ I +L GEIK + + L ++ K GF F E E A+
Sbjct: 285 SSTVFIGNLSYSTNEQNIRKLLKDCGEIKGVRIALGEDGKMK-GFAHVEFEDAESAEKAM 343
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWG 152
K+ +G LD R I+VD +D R G
Sbjct: 344 KF-NGADLDGRNIKVDISEKLRDKRAEG 370
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST ++VGN+ F T E + F G I + + + + K G+ F F +R + E AV
Sbjct: 185 STEIFVGNIPFTTDAETLKAKFEAIGTI--VNVSIPMSGKRMKGYAFIKFSTRAEAEKAV 242
Query: 125 KYISGTILDDRPIRVDFDWGFQ-DGRQWGRGRSGGQVRDEYRT 166
K ++ D R ++V+F G + + R+ G G+ +++ ++
Sbjct: 243 KKLNDFDFDGRQLKVNFSSGKEAEKREKKTGDENGEKKEQTKS 285
>gi|395329428|gb|EJF61815.1| hypothetical protein DICSQDRAFT_154995 [Dichomitus squalens
LYAD-421 SS1]
Length = 374
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + E+Q+ ++F G++ + + D+++ P G+ F F E AV
Sbjct: 2 SKVVFVGNVPYNMAEDQLIDVFKSVGQVVGLRLVFDRDTGKPKGYGFCEFADHETAASAV 61
Query: 125 KYISGTILDDRPIRVDF--DWGFQDGRQWGRGR--SGGQVRDEYR 165
+ ++G + RP+R+D F +G+ RG GG+ R ++R
Sbjct: 62 RNLNGYEIGGRPLRIDLADSDPFLEGKTTVRGEIIDGGETRAQWR 106
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|351701345|gb|EHB04264.1| Putative RNA-binding protein 11 [Heterocephalus glaber]
Length = 245
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP TQEE A TTV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FP-TQEE------ADTTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 53/92 (57%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
A+ ++YVG++ EEQ+Y+LFS+ +I I + D+ ++ G+ + F + +D +
Sbjct: 32 FANASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASN 91
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
A++ ++ T L+ +PIR+ F R+ G G
Sbjct: 92 AMELLNFTPLNGKPIRIMFSQRDPSIRKSGHG 123
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T VYV N+S T+E + +LF G I + D N K+ C F F F + + AV+
Sbjct: 214 TNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRC-FGFVNFQNPDSAAAAVE 272
Query: 126 YISGTIL-DDRPIRV 139
++GT + +DR + V
Sbjct: 273 RLNGTTINNDRVLYV 287
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T E+ + E+FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGRLLDGRELRV 87
>gi|223995751|ref|XP_002287549.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976665|gb|EED94992.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 76
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN++F TTEEQ+Y FS G I K+ M D ++ P GF F F + A++ +
Sbjct: 1 VFVGNLAFSTTEEQLYTAFSELGRIVKVRMVSDNDTGKPRGFAFIEFEDPQAALSAIRNM 60
Query: 128 SGTILDDRPIRVDF 141
+ ++ R IRV+F
Sbjct: 61 NDYEINGRRIRVNF 74
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM 18645]
Length = 101
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T +YVGN+ F +E + +F+R G + + M DK++ P GF F ED+++A+
Sbjct: 2 TQIYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIV 61
Query: 126 YISGTILDDRPIRVD 140
++G+ L R I V+
Sbjct: 62 RLNGSHLSGRTIVVN 76
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KDQ+ ++DR + ++A S T++VGN+ F E+ + ELF G I I +
Sbjct: 84 KDQQ--GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRL 141
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D +S P GF + + S ++ A + G L RP+R+DF
Sbjct: 142 PTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDF 185
>gi|350296344|gb|EGZ77321.1| hypothetical protein NEUTE2DRAFT_78674 [Neurospora tetrasperma FGSC
2509]
Length = 321
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG + + D+ + P GF FA F + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASA 65
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
V+ ++ + R +RVDF GR R GG
Sbjct: 66 VRNLNDHEIMGRKLRVDFSNETVSDEDGGRDRDGG 100
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF T E I E+F+ G + ++ + D++S GF + F S+E+ A+
Sbjct: 347 SNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAAL 406
Query: 125 KYISGTILDDRPIRVDF 141
+ + G + RP+RVDF
Sbjct: 407 EALQGQDVAGRPLRVDF 423
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%)
Query: 45 AYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSK 104
A+RDR ++ A ++ +V+VGN+S+ EEQ+ ++FS+ G + + + D+ +
Sbjct: 2 AFRDREGAASKTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETG 61
Query: 105 TPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
P G+ F + + E A++ ++G L+ R +RVD G
Sbjct: 62 KPKGYGFCEYNDPQTAESAIRNLNGYELNGRQLRVDSAAG 101
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+G +D R IRVD D R RG GG
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 98
>gi|268569440|ref|XP_002640523.1| Hypothetical protein CBG18685 [Caenorhabditis briggsae]
Length = 84
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN + TTE+++ + F+ AGE+ + + LD+ + P GF F F AV+
Sbjct: 7 SVYVGNAPYQTTEQEMGDFFATAGEVTNVRIVLDRETGRPRGFAFVEFAEEAGANRAVEQ 66
Query: 127 ISGTILDDRPIRVD 140
+GT + R +RV+
Sbjct: 67 FNGTDFNGRSLRVN 80
>gi|164427135|ref|XP_964488.2| hypothetical protein NCU03311 [Neurospora crassa OR74A]
gi|157071622|gb|EAA35252.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 322
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG + + D+ + P GF FA F + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASA 65
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
V+ ++ + R +RVDF GR R GG
Sbjct: 66 VRNLNDHEIMGRKLRVDFSNETVSDEDGGRDRDGG 100
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+G +D R IRVD D R RG GG
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 98
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGRMLDGRELRV 87
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF T+E+ ++ LF+ G +K + + D+ S P GF + F E + A
Sbjct: 426 SNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAF 484
Query: 125 KYISGTILDDRPIRVDF 141
+ +G LD RPIR+D+
Sbjct: 485 EANNGADLDGRPIRLDY 501
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VG +S+ + + F+ GEI+ + +D+N+ GF + F + E + A+
Sbjct: 326 SKAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKAL 385
Query: 125 KYISGTILDDRPIRVDFDWG-FQDGRQWGRGRSGGQVRDEYRTDYDPDILLLTLLNFMCW 183
+ ++G +D+RPI+VD D + R ++ G V T + L + L+F
Sbjct: 386 E-LNGKEIDNRPIKVDISTPRNPDAARQKRAQTFGDV-----TSPPSNTLFVGNLSFNTS 439
Query: 184 SDVV 187
D V
Sbjct: 440 EDSV 443
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+G +D R IRVD D R RG GG
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 98
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|336464258|gb|EGO52498.1| hypothetical protein NEUTE1DRAFT_72168 [Neurospora tetrasperma FGSC
2508]
Length = 321
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + TEEQI E+FS AG + + D+ + P GF FA F + AV
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+ ++ + R +RVDF GR R GG
Sbjct: 67 RNLNDHEIMGRKLRVDFSNETVSDEDGGRDRDGG 100
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF T +++E+F G + + +++ P GF + F S E+ ++A
Sbjct: 280 PSDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNA 339
Query: 124 VKYISGTILDDRPIRVDF 141
+ ++G LD RP R+DF
Sbjct: 340 LNSLNGEYLDGRPCRLDF 357
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
++ ++ S++ R T ++ + AST +YVGN+++ +E + + FS+ GE+K +
Sbjct: 62 QNGKRASSFSVRAMAETFQDQATSTAASTKLYVGNLAWSCDDEMLNQAFSQFGEVKAAEV 121
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
LD+ S GF F S + E A + + GT L R IRV+F
Sbjct: 122 VLDRESGRSRGFAFVTMASPDAAEKARRGLDGTELAGRAIRVNF 165
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+ + + + +LF G + + +D++S GF F + E+ +A+ +
Sbjct: 206 LYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMANL 265
Query: 128 SGTILDDRPIRVDF---DWGFQDGRQ 150
G + R IRV+ G ++GR+
Sbjct: 266 DGEEIGGRTIRVNLATKSSGNREGRE 291
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 15 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 74
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 75 NGKSVDGRQIRVD 87
>gi|195037535|ref|XP_001990216.1| GH18352 [Drosophila grimshawi]
gi|193894412|gb|EDV93278.1| GH18352 [Drosophila grimshawi]
Length = 430
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y DPD
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPD 121
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + +YE+F + GEI + + ++ P GF + + S ED A
Sbjct: 295 PSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKA 354
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+ + G +++RP+R+D+ Q+ +G + GG
Sbjct: 355 FEGLQGEYINNRPVRLDYSIPKQN---FGNNQRGG 386
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY R D E+A+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 SLDGRMLDGRELRV 87
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF T E I E+F+ G + ++ + D++S GF + F S+E+ A+
Sbjct: 334 SNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAAL 393
Query: 125 KYISGTILDDRPIRVDF 141
+ + G + RP+RVDF
Sbjct: 394 EALHGQDVAGRPLRVDF 410
>gi|383850030|ref|XP_003700631.1| PREDICTED: uncharacterized protein LOC100880966 [Megachile
rotundata]
Length = 301
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S +TTE+QIY +FS+ G ++++ + D + GFCF F S ED + A + +G +
Sbjct: 145 LSIFTTEQQIYHIFSKHGPVERVQVVFDAKTGRSRGFCFVYFESAEDAKVAREQCTGMEI 204
Query: 133 DDRPIRVDF 141
D R IRV F
Sbjct: 205 DGRRIRVAF 213
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|427417658|ref|ZP_18907841.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760371|gb|EKV01224.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++YVGN+S+ T E I E+F G + ++ + +D+ S P GF F ++ED A++
Sbjct: 2 SIYVGNLSYDVTREDIEEVFKEYGRVNRVSLPMDRESGRPRGFAFVEMAAKEDEAKAIEA 61
Query: 127 ISGTILDDRPIRVD 140
+ G DR +RV+
Sbjct: 62 LDGAEWMDRVMRVN 75
>gi|336261134|ref|XP_003345358.1| hypothetical protein SMAC_04589 [Sordaria macrospora k-hell]
gi|380090609|emb|CCC11604.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG + + D+ + P GF FA F + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASA 65
Query: 124 VKYISGTILDDRPIRVDFD---WGFQDGRQWGRGRSGG 158
V+ ++ + R +RVDF + QD Q + SGG
Sbjct: 66 VRNLNDHEIMGRKLRVDFSNETFTDQDSAQPNQNTSGG 103
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT + + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 23 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 83 AMDGRMLDGRELRV 96
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDSRSRG 92
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|159476562|ref|XP_001696380.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
gi|158282605|gb|EDP08357.1| nuclear pre-mRNA splicing factor, component of splicing factor 3b
[Chlamydomonas reinhardtii]
Length = 396
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
TVYVGN+ TTEE ++ELF++AG + + M D+ + G+ F F ED + A+K
Sbjct: 31 ATVYVGNLDVQTTEELVWELFTQAGPVVNVYMPKDRVTNAHQGYGFVEFKGEEDADYAIK 90
Query: 126 YISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDI 172
++ + + IRV + QD RQ G + + + DPD+
Sbjct: 91 VLNMVKVYGKAIRV--NKASQDKRQADVG------ANLFIGNLDPDV 129
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans MPOB]
Length = 122
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S +YVGN+SF T+ EQ+ ELFS+ G ++ + D+ S GF F ++E+ + A+
Sbjct: 2 SMKLYVGNLSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAI 61
Query: 125 KYISGTILDDRPIRVD 140
++G + RP+ V+
Sbjct: 62 AELNGKDFNGRPLTVN 77
>gi|195108753|ref|XP_001998957.1| GI23336 [Drosophila mojavensis]
gi|193915551|gb|EDW14418.1| GI23336 [Drosophila mojavensis]
Length = 428
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y DPD
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPD 121
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|302411716|ref|XP_003003691.1| RNA binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261357596|gb|EEY20024.1| RNA binding domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 325
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
TV+VGN+S+ T++ + +F +++ I + D+N+ P G+ A F++ E A+
Sbjct: 210 TVFVGNISYEATDKDLNGVFGALEDVRSIRIATDRNTGWPIGYAHADFHTVEAATKAIDM 269
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
+ + RP+RV F QD R R GG
Sbjct: 270 LKTQKIGGRPLRVSFASQTQDANSRRRPREGG 301
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|297841223|ref|XP_002888493.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
gi|297334334|gb|EFH64752.1| hypothetical protein ARALYDRAFT_475731 [Arabidopsis lyrata subsp.
lyrata]
Length = 293
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 45 AYRDRRFP--GTQEEFEEALLA--------STTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
A R R P + EE+L A TTVY+ N+ T E I EL++ GE+K+
Sbjct: 75 ARRKRSLPWQNQNDLLEESLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYTEIGELKR 134
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
+ DKN + P G ++ R D A++ + +LD RP+R++ G
Sbjct: 135 YAIHYDKNGR-PSGSAEVVYMRRSDALQAMRKYNNVLLDGRPMRLEILGG 183
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + +EEQI ++FSRAG++ + D+ + P GF FA + + A
Sbjct: 6 PSRVVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDSAASA 65
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
V+ ++ T + R +RVDF G GG
Sbjct: 66 VRNLNDTEIMGRKLRVDFSNEKPSTNDPDDGPPGG 100
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + IYE+FS+ GEI + + ++ P GF + + E + A
Sbjct: 259 PSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKA 318
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +++RP+R+DF
Sbjct: 319 LDALQGEYINNRPVRLDF 336
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|322785801|gb|EFZ12420.1| hypothetical protein SINV_01038 [Solenopsis invicta]
Length = 231
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 70 VGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISG 129
V +S +TTE+QI +FS+ G + ++ + +D + GFCF F S ED + A + +G
Sbjct: 95 VFGLSIFTTEQQIQHIFSKYGPVARVQVVIDAKTGRSRGFCFVYFESSEDAKVAKEQCTG 154
Query: 130 TILDDRPIRVDF 141
+D R IRVDF
Sbjct: 155 MEIDGRRIRVDF 166
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|449532026|ref|XP_004172985.1| PREDICTED: THO complex subunit 4-like, partial [Cucumis sativus]
Length = 368
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 42 KLSAYRDRRFPGTQEE-------FEEALLAS--------TTVYVGNMSFYTTEEQIYELF 86
+ SAY R+ P + FE++L AS T +YV N+ + T+E I ELF
Sbjct: 58 RASAYSIRKPPHRMKNVQWQHDLFEDSLRASGISGIQIGTKLYVSNLDYGVTKEDIKELF 117
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
S G++K+ + DKN + P G ++ R D A+K + +LD +P++++
Sbjct: 118 SEIGDVKRFAIHYDKNGR-PSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEM 171
>gi|384497441|gb|EIE87932.1| hypothetical protein RO3G_12643 [Rhizopus delemar RA 99-880]
Length = 291
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
R++ P E E S T+ V N+S T+ IY+LF+R G I ++ + D+ +
Sbjct: 193 RNKGTPSVGETMREKRDDSATLRVTNLSEDVTDSDIYDLFNRFGNIARVYLARDRETNLC 252
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
GF F F SRED + A + I+G D+ +RV+F
Sbjct: 253 KGFAFVSFNSREDADRAQQAINGYGYDNLILRVEF 287
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E+ ++E+F G + I + D S P GF + + S ++ A
Sbjct: 383 SDTLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAY 442
Query: 125 KYISGTILDDRPIRVDF 141
+ G +D RPIR+DF
Sbjct: 443 NELQGAEIDGRPIRLDF 459
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 39 DQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
D +K A + + + EE AS ++VGN+S+ TEE +++ F + GE+ IM
Sbjct: 252 DSKKRKAEEEPAAASKKSKTEEG--ASANLFVGNLSWNVTEEWLHQEFEQFGELSARIM- 308
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGG 158
++++ GF + F + D A + + +D R I +D+ G + G +
Sbjct: 309 TERDTGRSRGFGYVEFTNAADAAKAYEAMKEHEIDGRKINLDYATGRPANKDQGGFKERA 368
Query: 159 QVRDEY---RTDYDPDILLLTLLNFMCWSDVVNISF 191
Q R +T + D L + L F D V+ F
Sbjct: 369 QNRARSFGDQTSPESDTLFVGNLPFSANEDSVHEVF 404
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 56.2 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+S +VYVGN+ TE+Q+ +LFS+A + + + DK + G+ + F+S ED + A
Sbjct: 29 SSVSVYVGNLEASVTEQQLLDLFSQAVPVVSVRICDDKVTGRSLGYAYVNFHSHEDAKVA 88
Query: 124 VKYISGTILDDRPIRVDF 141
++Y + T+++ + IRV F
Sbjct: 89 LEYFNFTVVNGKSIRVMF 106
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + +FS+ G+I+++++ D+ +K GF F F + ED +DA+ +
Sbjct: 8 LFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKTVDGRQIRVD 80
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSPDSRSRG 92
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSPDSRSRG 92
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+G +D R IRVD D R RG GG
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 98
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF T E++++E F G ++ + + D+ + P GF + F + + A+
Sbjct: 303 SNTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAI 362
Query: 125 KYISGTILDDRPIRVDF 141
+G+ LD R IR+DF
Sbjct: 363 DGAAGSELDGRVIRLDF 379
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 57 EFEEALLASTT--VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
E EA+ T ++VG +S+ ++ + F + G +K + LD+ S GF + F
Sbjct: 194 EAAEAITLDNTPQIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEF 253
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDF 141
S E A+ +G +D RP+RVD
Sbjct: 254 ESHELAVKAMDQFAGKEIDGRPVRVDL 280
>gi|195395200|ref|XP_002056224.1| GJ10336 [Drosophila virilis]
gi|194142933|gb|EDW59336.1| GJ10336 [Drosophila virilis]
Length = 427
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y DPD
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCDPD 121
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT + + +F R GE+ I + D++++ GF F FY + D +DA+
Sbjct: 15 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALD 74
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 75 AMDGRMLDGRELRV 88
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+SF T ++I +F + GE+ I + D +K GF F FY + D EDA++
Sbjct: 2 VSLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAME 61
Query: 126 YISGTILDDRPIRV 139
+ G ++D R +RV
Sbjct: 62 RLDGYVIDGREMRV 75
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
V+VGNMSF TTE ++ F GEI +I + D+++ GF F + ED A+
Sbjct: 3 NVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAG 62
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
++GT LD R + V+ + G G GG R Y D
Sbjct: 63 LNGTQLDGRALNVN----EAKPKPQGGGARGGNDRGGYSRD 99
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT E + +F R G + I + D++++ GF F FY + D E+A++
Sbjct: 16 SLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFYEKRDAEEALQE 75
Query: 127 ISGTILDDRPIRVDF 141
+ G +LD R +RV
Sbjct: 76 MDGRVLDGRELRVQM 90
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|317449041|emb|CBX45938.1| Transformer-2 [Bradysia coprophila]
Length = 246
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 45 AYRDR-RFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
Y DR R GT+E+ ++ S + V +S YTT++QI ++FS+ G I+ + + +D ++
Sbjct: 97 PYNDRWRHVGTREKPKK----SRCLGVFGLSVYTTKDQIIQIFSKYGSIEHVQVVVDAST 152
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
GFCF F ED A + +G +D+R IRVD+
Sbjct: 153 GRSRGFCFVYFDRTEDATVARDHCTGMEIDNRRIRVDY 190
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA++
Sbjct: 18 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 77
Query: 127 ISGTILDDRPIRV 139
+ G LD R +RV
Sbjct: 78 MDGRKLDGRELRV 90
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + E+FS G++ ++ + D+++ T GF F F S +D +DA+ +
Sbjct: 7 LFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSM 66
Query: 128 SGTILDDRPIRVD 140
+G L+ R IRVD
Sbjct: 67 NGRSLEGRQIRVD 79
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 56.2 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E AS T+ V N+SF TEE + F +A I+ + + P GF F F S +D
Sbjct: 462 EIFSASKTLVVNNLSFNATEEVLQSTFEKAVSIR-----IPQRDGRPKGFAFLEFESTDD 516
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
+DA++ + T ++ R IR++ + R W RG SG
Sbjct: 517 AKDALENFNNTEIEGRSIRLE----YSQSRDWNRGNSG 550
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 20/125 (16%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E A+TT++VG + T+E + + FS+ GEI + + + K CGF F +R D
Sbjct: 286 EGDSANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKG----CGFV--QFANRND 339
Query: 120 TEDAVKYISGTILDDRPIRVDFDWG-------FQD-GRQWGRGRSGGQVRDEY----RTD 167
E+A++ ++GT++ + +R+ WG F+D G QW GG + D Y +
Sbjct: 340 AEEALQKLNGTVIGKQTVRL--SWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASP 397
Query: 168 YDPDI 172
+DP +
Sbjct: 398 HDPSM 402
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|345807539|ref|XP_003435628.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Canis lupus
familiaris]
Length = 108
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
E+A+ +++GT LDD I D+D GF++GRQ+ RSGGQ+R+E+R D D
Sbjct: 40 AENAMLFLNGTCLDDHTICTDWDLGFREGRQYSHHRSGGQIRNEFREDSD 89
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ TT + + +F R GE+ I + D++++ GF F FY + D +DA+
Sbjct: 16 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALDA 75
Query: 127 ISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 76 MDGRMLDGRELRV 88
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>gi|308490983|ref|XP_003107683.1| CRE-CPF-2 protein [Caenorhabditis remanei]
gi|308250552|gb|EFO94504.1| CRE-CPF-2 protein [Caenorhabditis remanei]
Length = 345
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ TEE I +F++AG + I M D+ + P G+ F F + A++
Sbjct: 19 SVFVGNISYDVTEETIRAIFAKAGHVMSIKMVHDRETGKPKGYGFIEFPDINTADTAIRV 78
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G L R +RVD G + ++G +G +E Y P+
Sbjct: 79 LNGYELGGRVLRVDSAAGGMNMEEFGSTNTGPAPVEE--NPYGPE 121
>gi|187281361|ref|NP_001119705.1| transformer 2 isoform A [Bombyx mori]
gi|61583219|gb|AAT42220.2| transformer-2 protein A [Bombyx mori]
Length = 284
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 108 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 167
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 168 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 200
>gi|393244579|gb|EJD52091.1| hypothetical protein AURDEDRAFT_142864 [Auricularia delicata
TFB-10046 SS5]
Length = 334
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + EEQ+ ++F G++ + D+ + P G+ F F E AV
Sbjct: 6 SRVVFVGNVPYNMGEEQLIDVFKNVGQVVGFRLVFDRETGKPRGYGFCEFADHETAMSAV 65
Query: 125 KYISGTILDDRPIRVDF--DWGFQDGRQWGRGRSGGQVR 161
+ ++ I+D RP+R+D F +G+ RG + R
Sbjct: 66 RNLNNVIVDGRPLRIDLADSDPFLEGKTTTRGELPEEAR 104
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
PG +EEF E L V+VGN+ F Q+ LF +AG ++ + + DK + GF F
Sbjct: 73 PGGEEEFSEDL----RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGF 128
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVD 140
S ++ E AV+ +G +LD R +RV+
Sbjct: 129 VTMSSVQEVEAAVEQFNGYVLDGRSLRVN 157
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
VYVGN+S+ + LFS GE+ + + D+ S GF F + S E+ E+A+ +
Sbjct: 179 VYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNL 238
Query: 128 SGTILDDRPIRV 139
G+ LD R IRV
Sbjct: 239 DGSDLDGRQIRV 250
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R G++ I + D+ ++ GF F F+ R D EDA+
Sbjct: 2 VSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALD 61
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 62 SLDGRMLDGRELRV 75
>gi|384497191|gb|EIE87682.1| hypothetical protein RO3G_12393 [Rhizopus delemar RA 99-880]
Length = 267
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
R++ P E E S T+ V N+S T+ IY+LF+R G I ++ + D+ +
Sbjct: 169 RNKGAPSAGESMREKRDDSATLRVTNLSEDVTDSDIYDLFNRFGSIARVYLARDRETNLC 228
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
GF F F +RED + A + I+G D+ +RV+F
Sbjct: 229 KGFAFVSFNNREDADRAQQAINGYGYDNLILRVEF 263
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+ V N+ F TT + + E F R G+I+ + + LD N+K P GF F +Y + D DAVK
Sbjct: 8 STLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKA 67
Query: 127 ISGTILD 133
+ T LD
Sbjct: 68 MDNTDLD 74
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
+E S T+++G +++ TE+ I+ F+ GE+ + + + +S P GF + F S++
Sbjct: 488 DERSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQD 547
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDG 148
+ A++ ++G L RPIR+DF G +DG
Sbjct: 548 NAAKALETMNGQALGGRPIRIDF-AGKRDG 576
>gi|187281433|ref|NP_001119710.1| transformer 2 isoform F [Bombyx mori]
gi|61583224|gb|AAX47004.1| transformer-2 protein F [Bombyx mori]
Length = 274
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 93 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 152
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 153 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 185
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A TVYVGN+ TEE ++ELF +AG + + + D+ + T G+ F F + ED E
Sbjct: 27 AEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEYG 86
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDE-----YRTDYDPDI 172
+K ++ L +PI+V+ +S G RDE + + DPDI
Sbjct: 87 IKILNMVKLFGKPIKVN--------------KSVGDRRDEVGANLFIGNLDPDI 126
>gi|187281367|ref|NP_001119706.1| transformer 2 isoform B [Bombyx mori]
gi|61583220|gb|AAX47000.1| transformer-2 protein B [Bombyx mori]
Length = 273
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 97 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 156
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 157 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 189
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF + I+E F+ GE+ + + + P GF + + S ++ + A
Sbjct: 356 SDTLFLGNLSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAF 415
Query: 125 KYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 416 EALQGHYIDNRPVRLDF 432
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + +EEQI ++FS AG++ + D+ + P GF FA + + A
Sbjct: 5 PSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASA 64
Query: 124 VKYISGTILDDRPIRVDF-DWGFQDGRQWGRGRSGGQVRDEYRTDY 168
V+ ++ + R +RVDF + G DG G G RD T Y
Sbjct: 65 VRNLNDYEIMGRKLRVDFSNEGGSDGNDDNHGHQG---RDAGNTSY 107
>gi|187281373|ref|NP_001119707.1| transformer 2 isoform C [Bombyx mori]
gi|61583221|gb|AAX47001.1| transformer-2 protein C [Bombyx mori]
Length = 269
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 93 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 152
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 153 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 185
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T +YVGN+ F T+ + F+++GE+ + + D+ S GF F + E + A++
Sbjct: 3 TRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIE 62
Query: 126 YISGTILDDRPIRVD 140
++G ++D RP+RV+
Sbjct: 63 NMNGAMMDGRPLRVN 77
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + + ++K P GF F F+ R D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWG 152
+ G +LD R +RV +G +D GR WG
Sbjct: 75 MDGAVLDGRELRVQMARYGRRDLPRSSQEEPSGRSWG 111
>gi|320580999|gb|EFW95221.1| RNA-binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 343
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 2 AITKQYLWLVNRQKRTRHC--------FISSLLLGELSAMASLFKDQRKLSAYRDRRFPG 53
AIT+ + VN K+T H F S + A++ + R+L F G
Sbjct: 97 AITENDITRVNIPKKTAHKIKGFAYIDFKSQEHVETAIALSEQELNGRRLLIKDANSFEG 156
Query: 54 TQEEFEEAL---LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
++ EE L S ++VGN+SF TTEE + E F GEI +I M ++S GFC
Sbjct: 157 RPQKAEEPLSKNPPSRVLFVGNLSFDTTEELLEEHFRHCGEIVRIRMATFEDSGKCKGFC 216
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDF 141
F F E +A+K + L +RP+R+++
Sbjct: 217 FIDFKDIEGPTNALKDKTVRKLINRPLRLEY 247
>gi|187281421|ref|NP_001119709.1| transformer 2 isoform E [Bombyx mori]
gi|61583223|gb|AAX47003.1| transformer-2 protein E [Bombyx mori]
Length = 278
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 97 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 156
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 157 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 189
>gi|187281391|ref|NP_001119708.1| transformer 2 isoform D [Bombyx mori]
gi|61583222|gb|AAX47002.1| transformer-2 protein D [Bombyx mori]
Length = 289
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR G + E S + V +S YTTE+QI +FS+ G + K+ + +D + G
Sbjct: 108 RRHLGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 167
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
FCF F ED + A +G +D R IRVD+
Sbjct: 168 FCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 200
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + ++ +DA+ +
Sbjct: 7 LFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGKSLDGRQIRVD 79
>gi|329669018|gb|AEB96397.1| cleavage stimulation factor subunit 2 [Angiostrongylus cantonensis]
Length = 97
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 61 ALLASTT---VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSR 117
++AS T VYVGN+ + TTE+ I FS+AG + + + D+ + P GF F F
Sbjct: 10 GMVASPTRYSVYVGNIPYQTTEDAIGNHFSQAGRVTNVRIVYDRETGRPKGFGFCEFSDE 69
Query: 118 EDTEDAVKYISGTILDDRPIRVD 140
++AV ++GT + R +RV+
Sbjct: 70 AGAQNAVNTLNGTDFNGRSLRVN 92
>gi|384500196|gb|EIE90687.1| hypothetical protein RO3G_15398 [Rhizopus delemar RA 99-880]
Length = 213
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ +STT+Y GN+ + E + +F R G +K I + LD + GF F F R+
Sbjct: 131 EQDRKSSTTIYAGNLPYDFIERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEDRQ 190
Query: 119 DTEDAVKYISGTILDDRPIRVD 140
D EDA + G ++ R +R+D
Sbjct: 191 DAEDAFEKFDGFSVEGRRLRLD 212
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G + + + D+ S+ GF F F + ED+++A ++ +G L
Sbjct: 121 LSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSEDSKEAKEHANGMEL 180
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 181 DGRRIRVDF 189
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF TTEE + F + G I+K+ + D+++ GF F + + ED +DA++ +
Sbjct: 4 LFIGGLSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEGM 63
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 64 NGKTLDGRAIRVD 76
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF E + ELFS+ G I+ I + D +S P GF + F S ++ A+
Sbjct: 343 SDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAAL 402
Query: 125 KYISGTILDDRPIRVDFDWGFQ 146
+ +G L R IR+DF Q
Sbjct: 403 EAENGADLGGRSIRLDFSTPKQ 424
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+ + T+ +++ LFSR GEI+ + + LD +K P GF F FY ED ++A++
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 127 ISGTILDDRPIRV 139
+ G +D + V
Sbjct: 74 MDGEEIDGNKVEV 86
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S+T+++GN+SF TE+ ++ FS GE+ + + D +S P GF + F ++E A
Sbjct: 276 PSSTLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAAAA 335
Query: 124 VKYISGTILDDRPIRVDF 141
+ ++G L RP+R+DF
Sbjct: 336 IDAMTGQELAGRPLRLDF 353
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ EEQ+ ++FS+ G + + + D+++ P G+ F + + E A++
Sbjct: 27 SVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDSQTAESAIRN 86
Query: 127 ISGTILDDRPIRVDFDWG 144
++G L+ RP+RVD G
Sbjct: 87 LNGFELNGRPLRVDSAAG 104
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A AS T+ V N+SF TEE + F +A I+ + + P GF F F S +D
Sbjct: 457 ASAASKTLVVNNLSFNATEEVLQSTFEKAVSIR-----IPQRDGRPKGFAFLEFESTDDA 511
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
+DA++ + T ++ R IR++ + R W RG SG
Sbjct: 512 KDALENFNNTEIEGRSIRLE----YSQSRDWNRGNSG 544
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF G I + + + P GF + + S E+ + A
Sbjct: 310 PSDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKA 369
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 370 LDKLQGEYIDNRPVRLDF 387
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L +T++YVG++ T+ Q+YELFS+AG++ + + D NS+ G+ + + + D
Sbjct: 119 LPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAAR 178
Query: 123 AVKYISGTILDDRPIRV 139
A++ ++ L+++PIRV
Sbjct: 179 AMEALNFAPLNNKPIRV 195
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
V+V N+S TT+E + ++FS G I ++ + + K+ C F F F S +D AV+
Sbjct: 301 NNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRC-FGFVNFESPDDAARAVE 359
Query: 126 YISGTILDDR 135
++G ++D+
Sbjct: 360 ELNGKKINDK 369
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+Y+ N+ T++Q+ ELFS G+I + D+N + G F F +RE+ A+
Sbjct: 405 NLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVS-KGSGFVSFSTREEASQALTE 463
Query: 127 ISGTILDDRPIRVDF 141
++G ++ +P+ V F
Sbjct: 464 MNGKMISGKPLYVAF 478
>gi|194757038|ref|XP_001960772.1| GF13528 [Drosophila ananassae]
gi|190622070|gb|EDV37594.1| GF13528 [Drosophila ananassae]
Length = 261
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
AS + V ++ +TT++++ ELF++ G I++I M +D ++ GFCF F + D A
Sbjct: 99 ASRCIGVFGLNTFTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLSDARVA 158
Query: 124 VKYISGTILDDRPIRVDF 141
SG +DDR IRVD+
Sbjct: 159 KDACSGMEVDDRRIRVDY 176
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 48/78 (61%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ EEQ+ ++FS+ G + + + D+++ P G+ F + + E A++
Sbjct: 27 SVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRN 86
Query: 127 ISGTILDDRPIRVDFDWG 144
++G L+ RP+RVD G
Sbjct: 87 LNGFELNGRPLRVDSAAG 104
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++ N+S+ TTEE + G IK+I + + + P G+ F F D +DA K
Sbjct: 105 TLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQ 164
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
G +D R I VDF+ G + ++W R GG V
Sbjct: 165 ADGRKVDGRRIVVDFERG-RTIKEWKPRRLGGGV 197
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+V +SF +TE++I E FS GE+ + + +DK K P G+ F F ++ E A
Sbjct: 33 SAKVFVKGLSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKAC 92
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G +LD R I V F
Sbjct: 93 EGMNGKLLDGRAIYVRF 109
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 22/137 (16%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLA-----STTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
++ A R+ G Q+++ + + +TT++VG + ++E + + FS+ GEI +
Sbjct: 250 RIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVK 309
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD--------- 147
+ + K CGF F +R + EDA++ ++GT++ + +R+ WG
Sbjct: 310 IPVGKG----CGFV--QFANRNNAEDALQKLNGTVIGKQTVRL--SWGRNPANKQMRADF 361
Query: 148 GRQWGRGRSGGQVRDEY 164
G QW GGQV D Y
Sbjct: 362 GNQWSGAYYGGQVYDGY 378
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 49/77 (63%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L +T++YVG++ T+ Q+YELFS+AG++ + + D NS+ G+ + + + D
Sbjct: 119 LPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAAR 178
Query: 123 AVKYISGTILDDRPIRV 139
A++ ++ L+++PIRV
Sbjct: 179 AMEALNFAPLNNKPIRV 195
Score = 40.8 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RRF + ++ + +Y+ N+ T++Q+ ELFS G+I + D+N + G
Sbjct: 388 RRFEQSMKDAADKY-QGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSK-G 445
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
F F +RE+ A+ ++G ++ +P+ V F
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYVAF 478
Score = 40.8 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+V N+S TT+E + ++FS G I ++ + + K+ C F F F S +D AV+ +
Sbjct: 303 VFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRC-FGFVNFESPDDAARAVEEL 361
Query: 128 SGTILDDR 135
+G ++D+
Sbjct: 362 NGKKINDK 369
>gi|37520960|ref|NP_924337.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35211955|dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 122
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T++VGN+ F TE++I E F+ GE+K + + +D+ + P GF F S + A+
Sbjct: 2 TLFVGNLPFSATEQEIVEAFTEYGEVKSVKIPMDRETGRPRGFAFVDLESETAEQAAIDD 61
Query: 127 ISGTILDDRPIRVD 140
+ G ++R IRV+
Sbjct: 62 LDGATWNNREIRVN 75
>gi|358056531|dbj|GAA97500.1| hypothetical protein E5Q_04178 [Mixia osmundae IAM 14324]
Length = 287
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 40 QRKLSAYRD---RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
+R+ ++ RD + P A S + V +S T E + ++F+R GE+ K++
Sbjct: 20 RREPTSPRDAYPSQVPARPRNAPAAPTKSNVLGVFGLSVNTRERDLEDVFTRIGEVDKVV 79
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 156
+ D+ S+ GF F S +D E A+ ++G +D R +RVD+ + R G
Sbjct: 80 VVYDQRSERSRGFAFVTMRSEDDAEKAIADLNGQEIDGRRVRVDYSLTTRPHRPTP-GEY 138
Query: 157 GGQVRDEYR 165
G RDE+R
Sbjct: 139 MGYRRDEFR 147
>gi|332030467|gb|EGI70155.1| Transformer-2 protein-like protein beta [Acromyrmex echinatior]
Length = 242
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S +TTE+QI +FS+ G ++++ + +D + GFCF F + ED + A + +G +
Sbjct: 141 LSIFTTEQQIQHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFDTSEDAKVAKEQCTGMEI 200
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 201 DGRRIRVDF 209
>gi|428200576|ref|YP_007079165.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427978008|gb|AFY75608.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 93
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T++VGN+S +E + E+F+ G +KK+++ LD+ + GF F S + E A++
Sbjct: 2 TIFVGNISHQAAKEDLEEIFAEYGIVKKVVLPLDRETGRMRGFAFVDLSSEDQEEQAIRD 61
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
+ GT L R +RV+ R R R YRT Y
Sbjct: 62 LDGTELMGRQLRVN----------KARPREDNPNRGSYRTRY 93
>gi|268569436|ref|XP_002640522.1| Hypothetical protein CBG18684 [Caenorhabditis briggsae]
Length = 84
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++YVGN + TTE+++ + FS G + + + LD+ + P GF F F ++ E AV
Sbjct: 7 SIYVGNAPYQTTEQEMGDFFSSVGTVTNVRIVLDRETGRPRGFAFVEFSEQQSAERAVNE 66
Query: 127 ISGTILDDRPIRVD 140
++G + R +RV+
Sbjct: 67 LNGADFNGRQLRVN 80
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALF 114
+++ +A S ++ V N+++ T+ + + LFSR GEI+ + + LD NS P GF F F
Sbjct: 57 RDDAADAEGESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEF 116
Query: 115 YSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGR 153
D +A + G ++D I+VD Q GR+ R
Sbjct: 117 CDPRDVVEAKNAMDGKVVDGNAIQVDI---AQRGRKSPR 152
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
VYVGN+ + + E + E FS G + + + ++ P GF + LF D +DAV+ +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWV-----ARNPPGFAYVLFEDARDAKDAVRGL 68
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRG 154
G I+ DR +RVD GR RG
Sbjct: 69 DGKIICDRKVRVDISNSRSTGRPARRG 95
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT + + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGRMLDGRELRV 87
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T ++V +SFYTT++Q+ LFS G + + + D+N++ P GF F + S + E A K
Sbjct: 7 TKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARK 66
Query: 126 YISGTILDDRPIRVD 140
++G I+D R I V+
Sbjct: 67 ALNGRIVDGRLIFVE 81
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + ++ +DA+ +
Sbjct: 7 LFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGKSLDGRQIRVD 79
>gi|149240135|ref|XP_001525943.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450066|gb|EDK44322.1| hypothetical protein LELG_02501 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 224
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN+ + +T EQI ELF + G ++++ + DK S P G+ + F + E+ + AV+
Sbjct: 67 SVYVGNVDYQSTPEQIEELFHKVGIVERVTILFDKFSGLPKGYAYVEFQTPENAKKAVEE 126
Query: 127 ISGTILDDRPIRV 139
+ G R +RV
Sbjct: 127 LHGESFRGRELRV 139
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R G++ I + D+ ++ GF F FY R D E+A+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 SLDGRMLDGRELRV 87
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
VYVGN+ + + E + E FS G + + + ++ P GF + LF D +DAV+ +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWV-----ARNPPGFAYVLFEDARDAKDAVRGL 68
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRG 154
G I+ DR +RVD GR RG
Sbjct: 69 DGKIICDRKVRVDISNSRSTGRPARRG 95
>gi|145492248|ref|XP_001432122.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399231|emb|CAK64725.1| unnamed protein product [Paramecium tetraurelia]
Length = 559
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
STT ++GNMSFY TE+ +Y +F G+IK++ + D K+ GF + F+ D E A
Sbjct: 404 STTCFIGNMSFYATEDSLYPVFEDCGKIKEVRIAKDAEGKS-RGFGYVEFF---DNESAQ 459
Query: 125 KYIS--GTILDDRPIRVDF 141
K ++ GT ++ R IRVD
Sbjct: 460 KGLAKTGTDVEGRAIRVDL 478
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRVDF 141
+ G +LD R +RV
Sbjct: 74 AMDGRLLDGRELRVQM 89
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like [Ornithorhynchus
anatinus]
Length = 270
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|397582877|gb|EJK52449.1| hypothetical protein THAOC_28271, partial [Thalassiosira oceanica]
Length = 842
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 50 RFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGF 109
R P +EE TV+VGNMSF+ E+ + E F GEI I DK + G+
Sbjct: 687 RAPSQKEE------GCVTVFVGNMSFHIDEDTVRETFKDCGEIASIRFAEDKETGVFKGY 740
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
F + T+ AV ++GT + +RPIRVDF
Sbjct: 741 GHVEFVESKATDRAV-ALAGTYVMNRPIRVDF 771
>gi|386649517|gb|AFJ15564.1| transformer 2 transcript variant 284 [Apis mellifera]
Length = 284
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E S + V +S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED
Sbjct: 136 ENPSPSRCLGVFGLSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLED 195
Query: 120 TEDAVKYISGTILDDRPIRVDFD---------WGFQDGRQ---WGRGRSGGQVRDEYRTD 167
+ A + +G +D R +RVD+ G G+ RG G + RD YR
Sbjct: 196 AKVAKEQCAGMEIDGRRMRVDYSITQRAHTPTPGIYLGKPTHLHDRGWDGPRRRDSYRGS 255
Query: 168 Y 168
Y
Sbjct: 256 Y 256
>gi|387942551|ref|NP_001252514.1| transformer-2 sex-determining protein [Apis mellifera]
gi|386649519|gb|AFJ15565.1| transformer 2 transcript variant 252 [Apis mellifera]
Length = 252
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E S + V +S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED
Sbjct: 104 ENPSPSRCLGVFGLSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLED 163
Query: 120 TEDAVKYISGTILDDRPIRVDFD---------WGFQDGRQ---WGRGRSGGQVRDEYRTD 167
+ A + +G +D R +RVD+ G G+ RG G + RD YR
Sbjct: 164 AKVAKEQCAGMEIDGRRMRVDYSITQRAHTPTPGIYLGKPTHLHDRGWDGPRRRDSYRGS 223
Query: 168 Y 168
Y
Sbjct: 224 Y 224
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
VYVGN+ + + E + E FS G + + + ++ P GF + LF D +DAV+ +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWV-----ARNPPGFAYVLFEDARDAKDAVRGL 68
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRG 154
G I+ DR +RVD GR RG
Sbjct: 69 DGKIICDRKVRVDISNSRSTGRPARRG 95
>gi|9663023|emb|CAC01083.1| DIP1 protein [Arabidopsis thaliana]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 45 AYRDRRFP--GTQEEFEEALLA--------STTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
A R R P + +EE L A TTVY+ N+ T E I EL++ GE+K+
Sbjct: 76 ARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKR 135
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
+ DKN + P G ++ R D A++ + +LD RP++++ G
Sbjct: 136 YAIHYDKNGR-PSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGG 184
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
VYVGN+ + + E + E FS G + + + ++ P GF + LF D +DAV+ +
Sbjct: 14 VYVGNLGTHASREDLEEEFSYYGRLDSVWV-----ARNPPGFAYVLFEDARDAKDAVRGL 68
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRG 154
G I+ DR +RVD GR RG
Sbjct: 69 DGKIICDRKVRVDISNSRSTGRPARRG 95
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F FY + D EDA+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G ++D R +RV
Sbjct: 74 AMDGRMVDGRELRV 87
>gi|386649521|gb|AFJ15566.1| transformer 2 transcript variant 233 [Apis mellifera]
Length = 233
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 72 NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTI 131
+S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED + A + +G
Sbjct: 97 GLSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLEDAKVAKEQCAGME 156
Query: 132 LDDRPIRVDFD---------WGFQDGRQ---WGRGRSGGQVRDEYRTDY 168
+D R +RVD+ G G+ RG G + RD YR Y
Sbjct: 157 IDGRRMRVDYSITQRAHTPTPGIYLGKPTHLHDRGWDGPRRRDSYRGSY 205
>gi|195431461|ref|XP_002063759.1| GK15735 [Drosophila willistoni]
gi|194159844|gb|EDW74745.1| GK15735 [Drosophila willistoni]
Length = 277
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
AS + V ++ TT+ Q+ ELF++ G I++I M +D ++ GFCF + + D A
Sbjct: 102 ASRCIGVFGLNTNTTQHQVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYYENLSDARVA 161
Query: 124 VKYISGTILDDRPIRVDF 141
SG +DDR IRVD+
Sbjct: 162 KDACSGIKVDDRRIRVDY 179
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 22/122 (18%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+TT++VG + T+E + + FS+ GEI + + + K CGF F SR + E+A+
Sbjct: 311 NTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKG----CGFV--QFASRSNAEEAL 364
Query: 125 KYISGTILDDRPIRVDFDWGFQD----------GRQWGRGRSGGQVRDEY----RTDYDP 170
+ ++GT++ + +R+ WG G QWG GGQ+ D Y +DP
Sbjct: 365 QKLNGTVIGKQTVRL--SWGRNPANKQQLRSDFGNQWGGAYYGGQIYDGYGYALPPPHDP 422
Query: 171 DI 172
+
Sbjct: 423 SM 424
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A++ +YV +SF TTEE + F R G++ ++ + +++ +K P GF F + S E++++A
Sbjct: 68 AASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNA 127
Query: 124 VKYISGTILDDRPIRVD 140
++ + G LD R I V+
Sbjct: 128 MEGMQGKFLDGRVIFVE 144
>gi|148665852|gb|EDK98268.1| RNA binding motif protein 11, isoform CRA_a [Mus musculus]
Length = 254
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|432105727|gb|ELK31918.1| RNA-binding protein 7 [Myotis davidii]
Length = 255
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF + G + K+ + DK+ K P F F F
Sbjct: 3 AAEADCTLFVGNLETKVTEELLFELFHQGGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 61
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ-WGRGRSGGQVRDEYRTDYDPDILLLTLLN 179
A+ ++G L RPI++ F G Q S V + T P+ T+ N
Sbjct: 62 PYAMNLLNGIKLFGRPIKIQFRSGSSHASQDVSLSYSQHHVGNSSPTSTSPNRHERTVDN 121
Query: 180 FMCWSDVVNISFHRTEAF 197
++ SF E F
Sbjct: 122 MTPSPQIIQRSFSSPENF 139
>gi|428177517|gb|EKX46396.1| hypothetical protein GUITHDRAFT_70536, partial [Guillardia theta
CCMP2712]
Length = 82
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN+ + +E+Q+ E+F AG + + L + P GF F F E E AV+ +
Sbjct: 1 VFVGNIPYTASEDQLQEVFETAGPVLAFRLVLHPETGAPKGFGFCEFRDVESAEIAVRNL 60
Query: 128 SGTILDDRPIRVDFDWGFQDGR 149
+ ++ RP+RVDF D +
Sbjct: 61 NNYEMNGRPLRVDFASSISDQK 82
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A++ +YV +SF TTEE + F R G++ ++ + +++ +K P GF F + S E++++A
Sbjct: 65 AASRLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNA 124
Query: 124 VKYISGTILDDRPIRVD 140
++ + G LD R I V+
Sbjct: 125 MEGMQGKFLDGRVIFVE 141
>gi|158286824|ref|XP_308949.4| AGAP006798-PA [Anopheles gambiae str. PEST]
gi|157020653|gb|EAA04295.4| AGAP006798-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%)
Query: 72 NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTI 131
N+S YTTE ++Y+ FS+ G ++K + LD + GF F F S ED + A +G
Sbjct: 102 NLSVYTTEAELYDTFSKFGPLRKTTVVLDAKTGRSRGFGFVYFESAEDAKVAHDQANGIE 161
Query: 132 LDDRPIRVDF 141
+ DR IRVDF
Sbjct: 162 IGDRRIRVDF 171
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T E+ + +LFS G+I ++++ D+ ++ GF F + ED +DA++ +
Sbjct: 8 LFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDAKDAMRAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGESVDGRQIRVD 80
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 49/77 (63%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
L +T++YVG++ ++ Q+YELFS+AG++ + + D S+ G+ + F + D
Sbjct: 43 LPTTSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAAR 102
Query: 123 AVKYISGTILDDRPIRV 139
A++ ++ +L+++PIRV
Sbjct: 103 ALEVLNFAVLNNKPIRV 119
Score = 40.0 bits (92), Expect = 0.60, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S +++ N+ + ++E FS G I + +D+ ++ GF F + E ++A
Sbjct: 132 GSANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQSK-GFGFVQYEKEEAAQNA 190
Query: 124 VKYISGTILDDRPIRV 139
+K ++G +++D+P+ V
Sbjct: 191 IKSLNGMLINDKPVFV 206
Score = 38.5 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 55 QEEFEEALLASTTVYVG------NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
+ FE++L + Y G N+ ++Q+ ELFS G+I + D+N + G
Sbjct: 311 KRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSK-G 369
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
F F +RE+ A+ ++G ++ +P+ V F
Sbjct: 370 SGFVAFSTREEASQALTEMNGKMISGKPLYVAF 402
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +S+ TTE+ + E FS+ G I K+ + D+ + GF F F + ED +DA+ +
Sbjct: 7 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKQVDGRMIRVD 79
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S+ ++VGN+S+ TE+ ++E F GE+K + + D+ S P GF + F + + A
Sbjct: 443 SSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAF 502
Query: 125 KYISGTILDDRPIRVDF 141
+ +SGT + R IR+D+
Sbjct: 503 EALSGTEIGGRSIRLDY 519
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P QEE S T++VG +S+ ++Q+ F+ GE+ + +D+N+ GF
Sbjct: 335 PAEQEE------ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGH 388
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
F + A+ ++G +D RP+ VD G +Q
Sbjct: 389 VEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQ 427
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF E + ELFS+ G I+ I + D +S P GF + F S ++ A+
Sbjct: 343 SDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAAL 402
Query: 125 KYISGTILDDRPIRVDFDWGFQ 146
+ G L R IR+DF Q
Sbjct: 403 EAEHGADLGGRSIRLDFSTPKQ 424
>gi|12323574|gb|AAG51767.1|AC066691_7 RNA and export factor binding protein, putative; 38196-36208
[Arabidopsis thaliana]
Length = 282
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 45 AYRDRRFP--GTQEEFEEALLA--------STTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
A R R P + +EE L A TTVY+ N+ T E I EL++ GE+K+
Sbjct: 63 ARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKR 122
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
+ DKN + P G ++ R D A++ + +LD RP++++ G
Sbjct: 123 YAIHYDKNGR-PSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGG 171
>gi|18408471|ref|NP_564871.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334183676|ref|NP_001185329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15294238|gb|AAK95296.1|AF410310_1 At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|23506135|gb|AAN31079.1| At1g66260/T6J19_1 [Arabidopsis thaliana]
gi|332196365|gb|AEE34486.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332196366|gb|AEE34487.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 45 AYRDRRFP--GTQEEFEEALLA--------STTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
A R R P + +EE L A TTVY+ N+ T E I EL++ GE+K+
Sbjct: 76 ARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKR 135
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
+ DKN + P G ++ R D A++ + +LD RP++++ G
Sbjct: 136 YAIHYDKNGR-PSGSAEVVYMRRSDAIQAMRKYNNVLLDGRPMKLEILGG 184
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++GN+SF T+E + E F+ G + I + D+ + P GF + F S ++ + A++
Sbjct: 360 TLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETGAPKGFGYVTFGSVDEAKAALEA 419
Query: 127 ISGTILDDRPIRVDF 141
+ G + +RPIR+D+
Sbjct: 420 MQGGYIKNRPIRLDY 434
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VGN+S+ E + F GE+ + + D+ + GF + F D A
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAK 318
Query: 128 SGTILDDRPIRVDF------DWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILLLTLLNFM 181
G LD RP+ VDF D D R+ G G+ D L L L+F
Sbjct: 319 QGAELDGRPLNVDFANARSNDNKPADNRRKSYGDQLGEPT---------DTLFLGNLSFD 369
Query: 182 CWSDVVNISF 191
C + V+ +F
Sbjct: 370 CTQEDVSEAF 379
>gi|386649515|gb|AFJ15563.1| transformer 2 transcript variant 234 [Apis mellifera]
Length = 234
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%)
Query: 72 NMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTI 131
+S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED + A + +G
Sbjct: 97 GLSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLEDAKVAKEQCAGME 156
Query: 132 LDDRPIRVDF 141
+D R +RVD+
Sbjct: 157 IDGRRMRVDY 166
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R GE+ I + D+ ++ GF F F+ R D E+A+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 TMDGRMLDGRELRV 87
>gi|395520258|ref|XP_003764252.1| PREDICTED: RNA-binding protein 7 isoform 2 [Sarcophilus harrisii]
Length = 270
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F E
Sbjct: 8 ADRTLFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEESVPYG 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI++ F G
Sbjct: 67 MNLLNGIKLFGRPIKIQFRSG 87
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ EEQ+ ++F++ G + + + D+++ P G+ F + + E A++
Sbjct: 27 SVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRN 86
Query: 127 ISGTILDDRPIRVDFDWG 144
++G L+ RP+RVD G
Sbjct: 87 LNGFELNGRPLRVDSAAG 104
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A AS T+ V N+SF TEE + F +A I+ + + P GF F F S +D
Sbjct: 416 ASAASKTLVVNNLSFNATEEVLQSTFEKAVSIR-----IPQRDGRPKGFAFLEFESTDDA 470
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
+DA++ + T ++ R IR++ + R W RG SG
Sbjct: 471 KDALENFNNTEIEGRSIRLE----YSQSRDWNRGNSG 503
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ EEQ+ ++F++ G + + + D+++ P G+ F + + E A++
Sbjct: 27 SVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKGYGFCEYNDAQTAESAIRN 86
Query: 127 ISGTILDDRPIRVDFDWG 144
++G L+ RP+RVD G
Sbjct: 87 LNGFELNGRPLRVDSAAG 104
>gi|363728611|ref|XP_416676.3| PREDICTED: putative RNA-binding protein 11 [Gallus gallus]
Length = 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A T++VGN+ EE +YELF +AG + K+ + DK K P F F F +E A
Sbjct: 10 ADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKEGK-PKSFGFVCFKHKESVPYA 68
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI+V + +G
Sbjct: 69 IALLNGIRLYGRPIKVRYRFG 89
>gi|428161292|gb|EKX30760.1| hypothetical protein GUITHDRAFT_123023 [Guillardia theta CCMP2712]
Length = 209
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T+YVGN++ TEE ++ELF +AG + + + DK + GF F F S ED E A+K
Sbjct: 15 ATIYVGNITEKCTEEILWELFLQAGPVVNVHIPRDKVTTVHSGFGFVEFRSEEDAEYAIK 74
Query: 126 YISGTILDDRPIRVD 140
++ L +P+R++
Sbjct: 75 IMNMIKLHGQPLRLN 89
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 30 LSAMASLFKDQRKL----SAYRDRRFPGTQEEF--EEALLASTTVYVGNMSFYTTEEQIY 83
+ AMA D R + SA + R P + F EE +TT+++GN+ F T++ +Y
Sbjct: 459 VEAMAGTEIDGRTINVDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSATQDSVY 518
Query: 84 ELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY--ISGTILDDRPIRVDF 141
E FS G+I + + D ++ GF + F ++E AV G +D R R+D+
Sbjct: 519 EAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQARLDY 578
Score = 43.5 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +S+ ++ + + F + GE+ + ++ ++ GF + F S ED AV+ +
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 128 SGTILDDRPIRVDF 141
+GT +D R I VDF
Sbjct: 463 AGTEIDGRTINVDF 476
>gi|395520256|ref|XP_003764251.1| PREDICTED: RNA-binding protein 7 isoform 1 [Sarcophilus harrisii]
Length = 276
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F E
Sbjct: 8 ADRTLFVGNLDIKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEESVPYG 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI++ F G
Sbjct: 67 MNLLNGIKLFGRPIKIQFRSG 87
>gi|157787052|ref|NP_001099368.1| RNA binding motif protein 11 [Rattus norvegicus]
gi|149059696|gb|EDM10579.1| RNA binding motif protein 11 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 144
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN F T+EE+I FS G + + + D+ + P GF F F + AV+
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 127 ISGTILDDRPIRVD 140
++G + R +RV+
Sbjct: 67 LNGAEFNGRQLRVN 80
>gi|225453197|ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 47 RDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
R + P + FE++L A+ T +Y+ N+ + T E I ELFS G+IK+ +
Sbjct: 69 RRTKIPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRYAVH 128
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+KN + P G ++ R D AVK + +LD +P++++
Sbjct: 129 YEKNGR-PSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEI 170
>gi|390478095|ref|XP_003735419.1| PREDICTED: putative RNA-binding protein 11-like [Callithrix
jacchus]
Length = 238
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A+ TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ANRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|380016565|ref|XP_003692251.1| PREDICTED: uncharacterized protein LOC100864001 [Apis florea]
gi|386649513|gb|AFJ15562.1| transformer 2 transcript variant 253 [Apis mellifera]
Length = 253
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED + A + +G +
Sbjct: 117 LSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLEDAKVAKEQCAGMEI 176
Query: 133 DDRPIRVDF 141
D R +RVD+
Sbjct: 177 DGRRMRVDY 185
>gi|325972386|ref|YP_004248577.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
gi|324027624|gb|ADY14383.1| RNP-1 like RNA-binding protein [Sphaerochaeta globus str. Buddy]
Length = 95
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ +YVGNMS+ TTEE +Y LF++ G++ + +D+++ P GF F A+
Sbjct: 2 AKKIYVGNMSYQTTEEALYSLFAQYGDVMSARIIMDRDTNRPKGFAFVEMDDDSAAVAAI 61
Query: 125 KYISGTILDDRPIRVD 140
+ G LD R +RV+
Sbjct: 62 SQLDGRELDGRNLRVN 77
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S ++VGN+SF TE+ ++E FS G++K + + D+ + +P GF + F E + A
Sbjct: 413 SAVLFVGNLSFSATEDLLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAY 472
Query: 125 KYISGTILDDRPIRVDF 141
+ +SG + R +R+D+
Sbjct: 473 EGVSGKEIAGRAVRLDY 489
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G + + + D+ S+ GF F F + ED+++A ++ +G L
Sbjct: 87 LSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEHANGMEL 146
Query: 133 DDRPIRVDF 141
D R IRVD+
Sbjct: 147 DGRRIRVDY 155
>gi|198418855|ref|XP_002123179.1| PREDICTED: similar to cleavage stimulation factor, 3 pre-RNA,
subunit 2, 64kDa [Ciona intestinalis]
Length = 455
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEEQ+ ++F+ G + + D+ S P G+ FA + +E +++
Sbjct: 17 SVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYGFAEYQDKETALSSMRN 76
Query: 127 ISGTILDDRPIRVDF 141
++G L RP+RVD
Sbjct: 77 LNGRELHGRPLRVDH 91
>gi|386649511|gb|AFJ15561.1| transformer 2 transcript variant 285 [Apis mellifera]
Length = 285
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E S + V +S +TTE+Q++ +FS+ G +++I + +D + G+CF F S ED
Sbjct: 136 ENPSPSRCLGVFGLSIFTTEQQVHHIFSKYGPVERIQVVIDAKTGHSKGYCFVYFESLED 195
Query: 120 TEDAVKYISGTILDDRPIRVDF 141
+ A + +G +D R +RVD+
Sbjct: 196 AKVAKEQCAGMEIDGRRMRVDY 217
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 55 QEEFEEALLASTTVYVGNMSFYTTEEQIYELFSR-AGEIKKIIMGLDKNSKTPCGFCFAL 113
+E EEA+ TV V N+ TE +IYELFS AG+I+ I + D+ + P G +
Sbjct: 109 NKEQEEAMRTDLTVLVANLHMKITEREIYELFSDGAGKIRDIQLVRDQRTGRPKGVAYVE 168
Query: 114 FYSREDTEDAVKYISGTILDDRPIRV 139
FY+ + A+ +SG L ++PIRV
Sbjct: 169 FYTNDSVIKALS-MSGHFLLNQPIRV 193
>gi|389746164|gb|EIM87344.1| hypothetical protein STEHIDRAFT_78229, partial [Stereum hirsutum
FP-91666 SS1]
Length = 244
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + EEQ+ ++F G++ + D+++ P G+ F F E + AV
Sbjct: 2 SKVVFVGNVPYNMGEEQLIDVFKSVGQVIGFRLVYDRDTGKPKGYGFCEFGDHETAQSAV 61
Query: 125 KYISGTILDDRPIRVDF--DWGFQDGRQWGRGR--SGGQVRDEYR 165
+ ++ + RP+R+D F +G+ RG GG+ R ++R
Sbjct: 62 RNLNNVDVGGRPLRIDLADSDPFLEGKTTVRGELVDGGETRAQWR 106
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF E + ELFS+ G I+ I + D S P GF + F S ++ A+
Sbjct: 343 SDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAL 402
Query: 125 KYISGTILDDRPIRVDFDWGFQ 146
+ G L R IR+DF Q
Sbjct: 403 EAEHGADLGGRSIRLDFSTPRQ 424
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 1/157 (0%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
K Q+K A D + + + AS ++VGN+S+ EE + F GE+ +
Sbjct: 210 KPQKKRKAEEDAEPVAKKAKVDVPEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRI 269
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
D+ S GF + F + ED A LD R + +D+ +G R R+
Sbjct: 270 VTDRESGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGNANPRERAD 329
Query: 158 GQVRD-EYRTDYDPDILLLTLLNFMCWSDVVNISFHR 193
+ + +T + D L + ++F ++V F +
Sbjct: 330 NRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSK 366
>gi|402080986|gb|EJT76131.1| cleavage stimulation factor 64-kDa subunit [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 304
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + +EEQI ++FSRAG++ + D+ + P GF FA + + AV
Sbjct: 7 SRVVFVGNIPYGLSEEQITDIFSRAGKVINFRLVYDRETGKPKGFGFAEYPDADSAASAV 66
Query: 125 KYISGTILDDRPIRVDF 141
+ ++ + + R +RVDF
Sbjct: 67 RNLNDSEIMGRKLRVDF 83
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ + N+S+ TT + +F R G+I + + DK S+ GF F FY R D E A+
Sbjct: 18 TSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 77
Query: 126 YISGTILDDRPIRV 139
G ++D R +RV
Sbjct: 78 RTDGKLVDGRELRV 91
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G + ++ + D+ S+ GF F F + ED+++A + +G L
Sbjct: 122 LSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMEL 181
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 182 DGRRIRVDF 190
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF E + ELFS+ G I+ I + D S P GF + F S ++ A+
Sbjct: 343 SDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAL 402
Query: 125 KYISGTILDDRPIRVDFDWGFQ 146
+ G L R IR+DF Q
Sbjct: 403 EAEHGADLGGRSIRLDFSTPRQ 424
>gi|296171404|emb|CBJ17283.1| transformer-2 [Anastrepha aff. fraterculus 3 LS-2007]
Length = 249
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E + + + V +S YTT+++I ++FSR G I++I + +D + GFCF +
Sbjct: 96 REKPVQNRCIGVFGLSVYTTQQKIRDIFSRFGPIERIQVVIDAQTGRSRGFCFIYYQDIA 155
Query: 119 DTEDAVKYISGTILDDRPIRVDFD---------WGFQDGRQWGRGRSGGQVRDEYRT 166
D + A SG +DDR IRVD+ G GR R R + RDEYR+
Sbjct: 156 DAKAAKDACSGMEIDDRRIRVDYSTTQRPHTPTPGVYMGRYTRRERDHDRYRDEYRS 212
>gi|149059695|gb|EDM10578.1| RNA binding motif protein 11 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 176
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ TT E + +F R G++ I + D+ ++ GF F FY R D E+A+
Sbjct: 14 VSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALD 73
Query: 126 YISGTILDDRPIRVDF 141
+ G +LD R +RV
Sbjct: 74 SLDGRMLDGRELRVQM 89
>gi|328867594|gb|EGG15976.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 372
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 54 TQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFAL 113
QEE E+ S ++VGN+ ++ E + +LF + G I + +G DK + GF F
Sbjct: 250 NQEEKEK----SKCLFVGNLPYHYQESHLRDLFIKFGTIATLNIGFDKRTGHNRGFAFIE 305
Query: 114 FYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
F ++ D ++A K S T +D R +R+D+D G
Sbjct: 306 FENKADADEAYKTYSTTDVDGRKLRLDWDVGLN 338
>gi|157278157|ref|NP_001098178.1| transformer 2a [Oryzias latipes]
gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes]
gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias latipes]
Length = 186
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G + ++ + D+ S+ GF F F + ED+++A + +G L
Sbjct: 25 LSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMEL 84
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 85 DGRRIRVDF 93
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ TT E + F + G++ + + D+ ++ GF F FY + D EDA+
Sbjct: 14 TSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALD 73
Query: 126 YISGTILDDRPIRV 139
+ G I+D R +RV
Sbjct: 74 SMDGAIMDGRELRV 87
>gi|313221560|emb|CBY36055.1| unnamed protein product [Oikopleura dioica]
gi|313239684|emb|CBY14576.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S +Y GN+S+ TE I +FS+ GEI + + D+ + T GFCF + + T AV
Sbjct: 35 SAWIYAGNLSYKLTEGDILAVFSQFGEISNVNLVRDRETGTSKGFCFICYEDQRSTILAV 94
Query: 125 KYISGTILDDRPIRVD 140
+G L +RP+RVD
Sbjct: 95 DNFNGMELCNRPVRVD 110
>gi|19113461|ref|NP_596669.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe 972h-]
gi|15213955|sp|O43040.1|CTF1_SCHPO RecName: Full=Cleavage and termination factor 1; AltName:
Full=Transcription termination factor ctf1
gi|2950477|emb|CAA17791.1| mRNA cleavage and polyadenylation specificity factor complex
subunit Ctf1 [Schizosaccharomyces pombe]
Length = 363
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
++ A V+VGN+ + +E+Q+ E+F++ G +K + LD + + G+ F F+ E T
Sbjct: 2 SMTAGNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETT 61
Query: 121 EDAVKYISGTILDDRPIRVDF 141
AV+ ++ + L R IRV+F
Sbjct: 62 AMAVRKLNNSELGPRKIRVEF 82
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T EE + F + G I+K+ + D+ ++ GF F + + ED +DA+ +
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDGM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGQTLDGRTIRVD 79
>gi|168702843|ref|ZP_02735120.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 94
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VGNMSF T EEQ+ E F++ G + K+ + D+ + P GF F S E A++ +
Sbjct: 5 LFVGNMSFATGEEQLREAFAQYGTVTKVQVVTDRETGRPRGFGFVEMSS--GGEQAIQAL 62
Query: 128 SGTILDDRPIRVD 140
+GT LD R + V+
Sbjct: 63 NGTQLDGRSLTVN 75
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + +EEQI ++FS AG + + D+ + P GF FA + + AV
Sbjct: 1280 SKIVFVGNIPYGLSEEQISDIFSSAGRVVSFRLVYDRENGKPKGFGFAEYPDSDSAASAV 1339
Query: 125 KYISGTILDDRPIRVDF-DWGFQDGRQWGRGRSG 157
+ ++ + R +RVDF + G +DG G SG
Sbjct: 1340 RNLNDYEVMGRKLRVDFSNEGGEDGHGGLTGASG 1373
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++F T E+ + ++F + G+I ++++ D+ +K GF F F + +D +DA+ +
Sbjct: 6 LFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 65
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 66 NGKAVDGRQIRVD 78
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + ED ++A + +G L
Sbjct: 138 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMEL 197
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 198 DGRRIRVDF 206
>gi|384501386|gb|EIE91877.1| hypothetical protein RO3G_16588 [Rhizopus delemar RA 99-880]
Length = 184
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
E+ STT+Y GN+ + E + +F R G +K I + LD + GF F F R
Sbjct: 102 EQERKNSTTIYAGNLPYDFVERDVATMFERYGRLKSITVPLDTVTNKNKGFAFVEFEERR 161
Query: 119 DTEDAVKYISGTILDDRPIRVD 140
D EDA + G ++ R +R+D
Sbjct: 162 DAEDAFEKFDGFSVEGRRLRLD 183
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 40 QRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGL 99
Q++ AY D+ A S+ ++VGN+S+ TE+ ++E F+ G+IK + +
Sbjct: 129 QKRAEAYGDK-----------ASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPT 177
Query: 100 DKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D+ + P GF + F E ++ A + +G + R IRVDF
Sbjct: 178 DRETGKPKGFAYVEFSDIEASKKAFEGAAGAEVAGRNIRVDF 219
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 32 AMASLFKDQRKLSAYRDRRFP--------GTQEEFEEALLASTTVYVGNMSFYTTEEQIY 83
A AS + + K A D P G EEA A+ T++VG +S+ + +
Sbjct: 2 AEASKSESKGKRKAEEDAPAPAKKVKLADGNAAPAEEASDATKTIFVGKLSWNVDNDWLA 61
Query: 84 ELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+ F+ GE+ + +D+N+ GF + F + E + A+ +G +D R + +D
Sbjct: 62 QEFAECGEVVSARVQMDRNTGKSRGFGYVTFATVEAVDAAIAQ-NGKEIDGRAVNID 117
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+ F E + F+ +++ + + D+ S P GF + F S +D +
Sbjct: 325 SDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSIDDAKKVF 384
Query: 125 KYISGTILDDRPIRVDF 141
+ ++G LD RP+R+D+
Sbjct: 385 EALNGGDLDGRPVRLDY 401
>gi|426370523|ref|XP_004052212.1| PREDICTED: RNA-binding protein 7 isoform 1 [Gorilla gorilla
gorilla]
Length = 149
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSGSSHAPQ 93
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ + N+S+ T E + FS+ GEI + + DK+ ++ GF F F+ + D DA+
Sbjct: 13 TSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKHGES-RGFAFVRFHDKRDAGDAID 71
Query: 126 YISGTILDDRPIRVDF 141
++G LD R IRVD+
Sbjct: 72 DLAGKDLDGREIRVDY 87
>gi|374314656|ref|YP_005061084.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
gi|359350300|gb|AEV28074.1| RRM domain-containing RNA-binding protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 92
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ +YVGNMS+ TTE+ + ELFS+ G + + +D+ ++ P GF F + A+
Sbjct: 2 AKKIYVGNMSYNTTEDDLRELFSQYGNVLSATIIMDRETRRPKGFGFVEMEENSAADAAI 61
Query: 125 KYISGTILDDRPIRVD 140
+ G +D R +RV+
Sbjct: 62 SQLDGKEIDGRNLRVN 77
>gi|313224020|emb|CBY43539.1| unnamed protein product [Oikopleura dioica]
Length = 277
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+Y GN+S+ TE I +FS+ GEI + + D+ + T GFCF + + T AV
Sbjct: 4 IYAGNLSYKLTEGDILAVFSQFGEISNVNLVRDRETGTSKGFCFICYEDQRSTILAVDNF 63
Query: 128 SGTILDDRPIRVD 140
+G L +RP+RVD
Sbjct: 64 NGMELCNRPVRVD 76
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ + N+S+ TT + +F R G+I + + DK S+ GF F FY R D E A+
Sbjct: 18 TSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 77
Query: 126 YISGTILDDRPIRV 139
G ++D R +RV
Sbjct: 78 RTDGKLVDGRELRV 91
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 49/80 (61%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
+L A +++ +SF TTEE + F R G++ ++ + +D+ +K P GF F + + E++
Sbjct: 111 SLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEES 170
Query: 121 EDAVKYISGTILDDRPIRVD 140
++A++ + G LD R I V+
Sbjct: 171 KNAMEGMHGKFLDGRVIFVE 190
>gi|426217269|ref|XP_004002876.1| PREDICTED: splicing regulator RBM11 [Ovis aries]
Length = 246
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A+ TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ANRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ TT E + ++F + G++ I + D+N+ GF F FY + D EDA+
Sbjct: 16 TSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMD 75
Query: 126 YISGTILDDRPIRV 139
+ +LD R +RV
Sbjct: 76 CMDRHLLDGREVRV 89
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
++A S T++VGN+SF TE+ + E F G I I + D+ S P GF + S +
Sbjct: 344 DKASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSID 403
Query: 119 DTEDAVKYISGTILDDRPIRVDF 141
+ + A + + G L RP+R+D+
Sbjct: 404 EAKAAYEALQGADLGGRPMRLDY 426
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+++GN+S+ EE + F GE+K + + D++S GF + F + ED A++
Sbjct: 246 NLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEA 305
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQ 150
+G LD+R IR+DF Q+ Q
Sbjct: 306 KNGAELDNRAIRLDFSVPRQNNAQ 329
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + ED ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|294933049|ref|XP_002780572.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
gi|239890506|gb|EER12367.1| Heterogeneous nuclear ribonucleoprotein D0, putative [Perkinsus
marinus ATCC 50983]
Length = 540
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S +V+VGN+ + T+E + E+F G I + M D+ + P GF + F + + E A
Sbjct: 400 SASVFVGNLPWSMTQEWLSEVFGDCGSITRCFMPTDRETGNPRGFAYIDFDTEDSAEKAT 459
Query: 125 KYISGTILDDRPIRVDFD 142
K +SGT L+ R IRV+++
Sbjct: 460 K-LSGTDLEGRQIRVNYN 476
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
+E++ S +V+VGN+ F T+E + ++FS G+I+++ + D S GF F F +
Sbjct: 287 QESVERSKSVFVGNLPFSMTKEWLEQIFSWCGDIERVSLPTDWESGKIKGFAFLDFADED 346
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQD 147
E AV +G + R +RV++ + D
Sbjct: 347 SAEKAVGK-NGEDCEGRDLRVNYSFPKND 374
>gi|255725524|ref|XP_002547691.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
gi|240135582|gb|EER35136.1| hypothetical protein CTRG_01998 [Candida tropicalis MYA-3404]
Length = 137
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 43 LSAYRDRRFPGTQEEFEEAL-----LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
+S + R P T+EE +E L + + +VYVGN+ + +T EQ+ E F G I+++ +
Sbjct: 1 MSEEKPTRVPETEEERQERLEKQQEIDNRSVYVGNVDYQSTPEQLEEFFHVVGVIERVTI 60
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRV 139
D+ S P G+ + F + E A++ + G R +R+
Sbjct: 61 LFDRFSGLPKGYAYIEFETEESAVKAIEELDGKEFKGRALRI 102
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ TT E + +F + G++ + + D+ S+ GF F FY R D EDA+
Sbjct: 13 TSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDRRDGEDAMH 72
Query: 126 YISGTILDDRPIRV 139
+ G ++D R +RV
Sbjct: 73 AMDGRMMDGRELRV 86
>gi|408400674|gb|EKJ79751.1| hypothetical protein FPSE_00031 [Fusarium pseudograminearum CS3096]
Length = 295
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG++++ + D + P GF FA + + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + R +RVDF
Sbjct: 66 VRNLNDHEIMGRKLRVDF 83
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T EE + F + G I+K+ + DK + GF F + + +D +DA++ +
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEGM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGKTLDGRAIRVD 79
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+ F E + ELFS+ G I I + D +S P GF + F S ++ A+
Sbjct: 338 SDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAAL 397
Query: 125 KYISGTILDDRPIRVDFDWGFQDG 148
+ G L R IR+DF Q G
Sbjct: 398 EAEYGADLGGRAIRIDFSTPRQPG 421
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 49 RRFPGTQEEFEEA----------LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
+RFP + EA + T +YVGN+SF TEE++ F + GE+ + +
Sbjct: 39 KRFPVKRARMREASCLVGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNII 98
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+D+ + GF F E +DA++ ++G +D R + V+
Sbjct: 99 MDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVN 140
>gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gibberella zeae PH-1]
Length = 294
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG++++ + D + P GF FA + + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + R +RVDF
Sbjct: 66 VRNLNDHEIMGRKLRVDF 83
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST ++V +SFYTTEE++ +FS G I++ + D + P GF F + S+ E AV
Sbjct: 25 STEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAV 84
Query: 125 KYISGTILDDRPIRVD 140
K + G I+ R I V+
Sbjct: 85 KAMDGRIIRGRIIFVE 100
>gi|345326044|ref|XP_003430992.1| PREDICTED: putative RNA-binding protein 11-like [Ornithorhynchus
anatinus]
Length = 240
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + DK K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLESRVREEILYELFLQAGPLIKVTICKDKEGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHTESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|449665135|ref|XP_002159315.2| PREDICTED: cleavage stimulation factor subunit 2-like [Hydra
magnipapillata]
Length = 413
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 41 RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLD 100
R++SA +D Q+ E A ++ +V+VGN+ + +++Q+ ++FS+AG + + D
Sbjct: 7 REISAVKD------QQMKEAAEKSARSVFVGNIPYEASDDQLKDIFSQAGPVLSFRLVYD 60
Query: 101 KNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+ + P G+ F + E + A++ ++GT + R +RVD
Sbjct: 61 RETGKPKGYGFCEYKDSETAQSAMRNLNGTEIHGRQLRVD 100
>gi|39930581|ref|NP_938044.1| splicing regulator RBM11 [Mus musculus]
gi|81912952|sp|Q80YT9.1|RBM11_MOUSE RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|29747748|gb|AAH50779.1| Rbm11 protein [Mus musculus]
Length = 238
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KDQ+ ++DR + ++A S T++VGN+ F E+ + ELF G I I +
Sbjct: 368 KDQQ--GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRL 425
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D +S P GF + + S ++ A + G L RP+R+DF
Sbjct: 426 PTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDF 469
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KDQ+ ++DR + ++A S T++VGN+ F E+ + ELF G I I +
Sbjct: 371 KDQQ--GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRL 428
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D +S P GF + + S ++ A + G L RP+R+DF
Sbjct: 429 PTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDF 472
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
F G + + E STT+ V N+S+ TEE + E+F +A I+ N P G+
Sbjct: 440 FTGEKSQQENQKGESTTLIVNNLSYAATEETLQEVFKKASSIRVP----QNNQGRPKGYA 495
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
F F + ED ++A+ ++ T ++ R IR++F W +G + +
Sbjct: 496 FVDFATAEDAKEALNSLNNTEIEGRTIRLEF-----SSPSWQKGNTNAR 539
Score = 42.7 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++ N+ + TE+ I E+F A E+ +I+M D NS+ G + F + + + A++
Sbjct: 370 TLFLKNLPYRITEDDIREVFENALEV-RIVMNKDGNSR---GMAYVEFKTEAEADKALEE 425
Query: 127 ISGTILDDRPIRVDF 141
GT ++ R + +DF
Sbjct: 426 KQGTEIEGRAVVIDF 440
>gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus]
gi|148665853|gb|EDK98269.1| RNA binding motif protein 11, isoform CRA_b [Mus musculus]
Length = 237
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 1 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 52
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 53 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 86
>gi|403286148|ref|XP_003934367.1| PREDICTED: putative RNA-binding protein 11 [Saimiri boliviensis
boliviensis]
Length = 237
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ G F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+G +D R IRVD D R RG GG
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRS--RGYRGGSA 98
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S +YVGN+ F EE I ++FS G I+ + M D+ + GF F + S + E+
Sbjct: 1 MVSNKIYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEE 60
Query: 123 AVKYISGTILDDRPIRVDF 141
AV ++G +D R ++V F
Sbjct: 61 AVAQMNGQPIDGRNLKVTF 79
>gi|291400883|ref|XP_002716809.1| PREDICTED: RNA binding motif protein 7-like [Oryctolagus cuniculus]
Length = 238
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|157121119|ref|XP_001659834.1| hypothetical protein AaeL_AAEL009224 [Aedes aegypti]
gi|108874698|gb|EAT38923.1| AAEL009224-PB [Aedes aegypti]
Length = 279
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G+ + +A+LA V N+S YTTE ++Y++F++ G +KK + +D + GF F
Sbjct: 74 GSDYDESKAVLA-----VFNLSIYTTESELYDVFTKFGPLKKATVVIDAKTGRSRGFGFV 128
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDF 141
F S ED + A +G + DR IRVD+
Sbjct: 129 YFDSTEDAKVAHAQANGIEIGDRRIRVDY 157
>gi|157121117|ref|XP_001659833.1| hypothetical protein AaeL_AAEL009224 [Aedes aegypti]
gi|108874697|gb|EAT38922.1| AAEL009224-PA [Aedes aegypti]
Length = 280
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G+ + +A+LA V N+S YTTE ++Y++F++ G +KK + +D + GF F
Sbjct: 74 GSDYDESKAVLA-----VFNLSIYTTESELYDVFTKFGPLKKATVVIDAKTGRSRGFGFV 128
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRVDF 141
F S ED + A +G + DR IRVD+
Sbjct: 129 YFDSTEDAKVAHAQANGIEIGDRRIRVDY 157
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
++T++V +SF TTE+ + E FS+ GE+ + + +DK P GF + F ++ E A+
Sbjct: 33 ASTLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKAL 92
Query: 125 KYISGTILDDRPIRVDF 141
++G ++D R + VD+
Sbjct: 93 TEMNGKVVDGRTVLVDY 109
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S ++V +S YTT++ + +LFS G+IK+ + D ++ P GF F F S +D A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 125 KYISGTILDDRPIRVD 140
K + G I+D R I V+
Sbjct: 66 KSLDGKIVDGRLIFVE 81
>gi|426392612|ref|XP_004062641.1| PREDICTED: splicing regulator RBM11 [Gorilla gorilla gorilla]
Length = 239
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S VY+GN+ T+ Q+Y LFS+ G ++K+++ +D + GF F + +D A+
Sbjct: 529 SQKVYLGNVDRMVTQAQLYALFSQFGPLEKVLLQMDPTTGASRGFAFLSYRDPKDANLAI 588
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP 170
+ +SG +L +P++ W +S E +TD P
Sbjct: 589 QTMSGQLLAGKPLKTG----------WANQQSAAAGIVEVKTDEIP 624
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 49 RRFPGTQEEFEEA----------LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
+RFP + EA + T +YVGN+SF TEE++ F + GE+ + +
Sbjct: 28 KRFPVKRARMREASCLVGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNII 87
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+D+ + GF F E +DA++ ++G +D R + V+
Sbjct: 88 MDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVN 129
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 49 RRFPGTQEEFEEA----------LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
+RFP + EA + T +YVGN+SF TEE++ F + GE+ + +
Sbjct: 28 KRFPVKRARMREASCLVGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNII 87
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+D+ + GF F E +DA++ ++G +D R + V+
Sbjct: 88 MDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVN 129
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 49 RRFPGTQEEFEEA----------LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMG 98
+RFP + EA + T +YVGN+SF TEE++ F + GE+ + +
Sbjct: 28 KRFPVKRARMREASCLVGDGLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNII 87
Query: 99 LDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
+D+ + GF F E +DA++ ++G +D R + V+
Sbjct: 88 MDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTVN 129
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLAST-----TVYVGNMSFYTTEEQIYELF 86
AMA+L + R L++ G + LLA + ++VG +S + TE + E F
Sbjct: 2 AMAALREASRCLASR------GRSAAWRPVLLAQSRGITYKLFVGGLSQFATEASLAEAF 55
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
SR G++ + + DK + P GF F F S E+ +A + ++G L+ R I VD Q
Sbjct: 56 SRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKARQ 115
Query: 147 D 147
D
Sbjct: 116 D 116
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G + + + D+ S+ GF F +RED+++A + +G L
Sbjct: 130 LSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDSKEAKERANGMEL 189
Query: 133 DDRPIRVDFD---------WGFQDGRQ-WGRGRSGGQVRDEYRTDYD 169
D R IRVD+ G GR +G G S + RD Y Y+
Sbjct: 190 DGRRIRVDYSITKGPHTPTPGIYMGRPTYGGGPSVSRRRDSYDRGYE 236
>gi|9757981|dbj|BAB08317.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 43 LSAYRDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
L R R P FE+ L A+ T ++V N+ T E I ELFS GE+++
Sbjct: 104 LPVRRVRSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVER 163
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
+ DKN + P G ++ R D A+K + +LD RP+R++ G G
Sbjct: 164 YAIHYDKNGR-PSGTAEVVYPRRSDAFQALKKYNNVLLDGRPMRLEILGGNNSSEAPLSG 222
Query: 155 R 155
R
Sbjct: 223 R 223
>gi|431838638|gb|ELK00569.1| Putative RNA-binding protein 11 [Pteropus alecto]
Length = 238
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLAST-----TVYVGNMSFYTTEEQIYELF 86
AMA+L + R L++ G + LLA + ++VG +S + TE + E F
Sbjct: 2 AMAALRETSRCLASR------GRSAAWRPVLLAQSRGITYKLFVGGLSQFATEASLAEAF 55
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
SR G++ + + DK + P GF F F S E+ +A + ++G L+ R I VD Q
Sbjct: 56 SRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKARQ 115
Query: 147 D 147
D
Sbjct: 116 D 116
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 19 HCFISSLLLGELSAMASLFKDQRK-------LSAYRDRR-FPGTQEEFEEALLASTTVYV 70
H + LL ++SA+ + +++K R+R F G QEE T+ V
Sbjct: 147 HAEKAKLLGKKVSAVETEPAEEKKDGPQGYVPPHMRNRDGFGGPQEE------EKATLRV 200
Query: 71 GNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGT 130
N+S T E ++ELF + G I ++ + D+ + GF F FY+RED + A+ ++GT
Sbjct: 201 TNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFIDFYNREDAQRAINALNGT 260
Query: 131 ILDDRPIRVDF 141
D + VD+
Sbjct: 261 GFDSLILNVDW 271
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 53 GTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFA 112
G +++F + T++VGN+ F +E ++ LF + GE+ + + D+ S P GF F
Sbjct: 122 GGEKKFRHDRKGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFV 181
Query: 113 LFYSREDTEDAVKYISGTILDDRPIRV 139
+ + + +DAV ++G LD R I V
Sbjct: 182 DYDNEQSAKDAVSNLNGMPLDGREISV 208
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 70 VGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISG 129
V +S YTTE + E+FS+ G I + + D+ S+ GF F F S +D ++A + +G
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFESVDDAKEAKERANG 81
Query: 130 TILDDRPIRVDF 141
LD R IRVDF
Sbjct: 82 MELDGRRIRVDF 93
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KDQ+ ++DR + ++A S T++VGN+ F E+ + ELF G I I +
Sbjct: 370 KDQQ--GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRL 427
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D +S P GF + + S ++ A + G L RP+R+DF
Sbjct: 428 PTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDF 471
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + L+ +K P GF F F+ D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWSDAQDAEAA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWGRGRSGGQVR 161
+ G +LD R +RV +G +D GR WG GR G + R
Sbjct: 75 MDGAVLDGRELRVQVARYGRRDLSGSSQEEPRGRSWG-GRYGRRSR 119
>gi|17553656|ref|NP_499734.1| Protein CPF-2 [Caenorhabditis elegans]
gi|3877650|emb|CAB05746.1| Protein CPF-2 [Caenorhabditis elegans]
Length = 336
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+S+ +E+ I +FS+AG + I M D+ + P G+ F F + E A++
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G L R +RVD G + ++G + +E Y P+
Sbjct: 79 LNGYELSGRILRVDSAAGGMNMEEFGSSSNAPAPVEE--NPYGPE 121
>gi|402895331|ref|XP_003910783.1| PREDICTED: RNA-binding protein 7 [Papio anubis]
Length = 267
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|77735925|ref|NP_001029659.1| RNA-binding protein 7 [Bos taurus]
gi|91207337|sp|Q3MHY8.1|RBM7_BOVIN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|75775082|gb|AAI04519.1| RNA binding motif protein 7 [Bos taurus]
gi|296480264|tpg|DAA22379.1| TPA: RNA-binding protein 7 [Bos taurus]
gi|440909197|gb|ELR59131.1| RNA-binding protein 7 [Bos grunniens mutus]
Length = 262
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRAGSSHASQ 93
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + +EEQI ++FS AG++ + D+ + P GF FA + + A
Sbjct: 5 PSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSAASA 64
Query: 124 VKYISGTILDDRPIRVDF-DWGFQDGR---QWGRGRSGG 158
V+ ++ + R +RVDF + G DG +GR GG
Sbjct: 65 VRNLNDYEIMGRKLRVDFSNEGGSDGNDDSHGHQGRDGG 103
>gi|410970206|ref|XP_003991579.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulator RBM11 [Felis
catus]
Length = 238
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|303275187|ref|XP_003056892.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461244|gb|EEH58537.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 302
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T+YVGN+ TEE ++E+F +AG + + + D+ S G+ F F + ED + A+K
Sbjct: 8 ATIYVGNLDLACTEEILWEVFVQAGPVVNVYVPKDRVSNAHQGYGFVEFANEEDADYAIK 67
Query: 126 YISGTILDDRPIRVD 140
++ L +P+RV+
Sbjct: 68 VLNMIKLHGKPVRVN 82
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEI---KKIIMGLDKNSKTPCGFCFALFYSREDTED 122
++VGN+ E+ +Y+ FS G + KI+ D +S GF F + S E +
Sbjct: 95 ANLFVGNLDSELDEKLLYDTFSAFGVVITTPKIMR--DPDSGNSRGFGFVSYDSFEAADA 152
Query: 123 AVKYISGTILDDRPIRVDFDW 143
A++ ++G L +RPI V F +
Sbjct: 153 AIEAMNGQFLCNRPISVTFAY 173
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G +SF T E+ + F + G I+K+ + DK + GF F + + ED +DA+ +
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAM 66
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 67 NGKTLDGRAIRVD 79
>gi|169234630|ref|NP_658983.3| splicing regulator RBM11 [Homo sapiens]
gi|9978670|sp|P57052.1|RBM11_HUMAN RecName: Full=Splicing regulator RBM11; AltName: Full=RNA-binding
motif protein 11
gi|7768750|dbj|BAA95545.1| RBM11 [Homo sapiens]
gi|119630467|gb|EAX10062.1| RNA binding motif protein 11, isoform CRA_c [Homo sapiens]
Length = 281
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|365986549|ref|XP_003670106.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
gi|343768876|emb|CCD24863.1| hypothetical protein NDAI_0E00470 [Naumovozyma dairenensis CBS 421]
Length = 258
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN+ T+ Q+YELF + I KI DK +T G+ F FY+ EDT VK
Sbjct: 50 SVYVGNIDPNVTKAQLYELFVQVSPISKIAYPKDKLLQTHQGYAFIEFYTPEDTNYVVKV 109
Query: 127 ISGTI-LDDRPIRV 139
++ T+ L DR ++V
Sbjct: 110 MNNTVSLYDRFLKV 123
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+++GN+SF E + ELFS+ G I+ I + D S P GF + F S ++ A+
Sbjct: 343 SDTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAM 402
Query: 125 KYISGTILDDRPIRVDF 141
+ G L R IR+D+
Sbjct: 403 EAEHGADLGGRSIRLDY 419
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A+ + ++VG +S YTT +++ +LFS G +K+ + LD ++ P GF F F S
Sbjct: 2 AIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQA 61
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDG 148
+ A+K ++G I+D R + V+ G
Sbjct: 62 QKALKAMNGRIVDGRLLFVEVAKSINSG 89
>gi|114683624|ref|XP_531391.2| PREDICTED: splicing regulator RBM11 [Pan troglodytes]
Length = 281
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V V +S YTTE + E+FSR G + + + D+ + GF F F ED+ +A++++
Sbjct: 114 VGVFGLSLYTTERDLREVFSRYGPLSSVNVVYDQRTGRSRGFAFVYFERMEDSREAMEHV 173
Query: 128 SGTILDDRPIRVDF 141
+G LD R +RVD+
Sbjct: 174 NGMELDGRKLRVDY 187
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 58 FEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSR 117
F++ +TTVY+GN++ YTT+ + +F G I ++ M D+ GF F S
Sbjct: 213 FQQTPAYNTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQADR------GFAFVKLDSH 266
Query: 118 EDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
E+ A+ + GT++ RPI+ WGR R+
Sbjct: 267 ENASMAIVQLQGTLIQGRPIKCS----------WGRDRTA 296
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN-SKTPCGFCFALFYSREDTEDAVKY 126
+YVGN+S TE + E+F+ AG ++ + + D+N S + F + E A++
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 127 ISGTILDDRPIRVDFDWGFQ 146
++G + D IRV +W +Q
Sbjct: 77 LNGRKIFDTEIRV--NWAYQ 94
>gi|332208260|ref|XP_003253218.1| PREDICTED: RNA-binding protein 7 [Nomascus leucogenys]
Length = 267
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|449266970|gb|EMC77948.1| Transformer-2 like protein beta, partial [Columba livia]
Length = 156
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + ED ++A + +G L
Sbjct: 69 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVEDAKEAKERANGMEL 128
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 129 DGRRIRVDF 137
>gi|426370525|ref|XP_004052213.1| PREDICTED: RNA-binding protein 7 isoform 2 [Gorilla gorilla
gorilla]
Length = 220
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSGSSHAPQ 93
>gi|389578479|ref|ZP_10168506.1| RRM domain-containing RNA-binding protein [Desulfobacter postgatei
2ac9]
gi|389400114|gb|EIM62336.1| RRM domain-containing RNA-binding protein [Desulfobacter postgatei
2ac9]
Length = 93
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN++ Y TEE + E F GE++ + + ++ ++ GF F S + + A+K +
Sbjct: 3 IYVGNLTEYMTEEALKEAFEAFGEVESVKIIKNRFNERSKGFGFVEMPSNSEADKAIKAL 62
Query: 128 SGTILDDRPIRVD 140
+G I+D +PI+V+
Sbjct: 63 NGNIVDKKPIKVN 75
>gi|55732787|emb|CAH93091.1| hypothetical protein [Pongo abelii]
Length = 264
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 2 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 60
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 61 PYAMNLLNGIKLYGRPIKIQFRSGSSHASQ 90
>gi|289741259|gb|ADD19377.1| hypothetical protein [Glossina morsitans morsitans]
Length = 260
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 60 EALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
E S + V ++ TT+++I E+FSR G I++I + +D + GFCF + D
Sbjct: 117 EKPSPSRCIGVFGLNVSTTQQKIREIFSRYGNIERIQVVIDAQTGHSRGFCFIYYEKLAD 176
Query: 120 TEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG---RGRSGGQVRDEYRT 166
+ A +Y G +D R IRVD+ + +GRS +RD+YR+
Sbjct: 177 AKLAREYCCGLEVDGRRIRVDYSITERPHTPTPGVYKGRSRKSLRDKYRS 226
>gi|397496846|ref|XP_003819236.1| PREDICTED: putative RNA-binding protein 11 [Pan paniscus]
Length = 281
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|344276876|ref|XP_003410231.1| PREDICTED: putative RNA-binding protein 11-like [Loxodonta
africana]
Length = 238
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAREE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|332229296|ref|XP_003263827.1| PREDICTED: splicing regulator RBM11 [Nomascus leucogenys]
Length = 281
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A+ TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ANRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|302926856|ref|XP_003054377.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735318|gb|EEU48664.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 294
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + TEEQI E+FS AG++++ + D + P GF FA + + A
Sbjct: 6 PSRVVFVGNIPYGLTEEQITEIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + R +RVDF
Sbjct: 66 VRNLNDYEIMGRKLRVDF 83
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G ILD R +RV
Sbjct: 74 AMDGAILDGRELRV 87
>gi|168700972|ref|ZP_02733249.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 117
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGNMSF TTE+++ ELFS+ G + K + +D+ + P GF F + E A++ +
Sbjct: 3 LYVGNMSFSTTEDELRELFSQYGTVTKAQIVMDRETGRPRGFAFVEM--SDGGEQAIQAL 60
Query: 128 SGTILDDRPIRVD 140
+GT + R + V+
Sbjct: 61 NGTQVGGRSLTVN 73
>gi|322693277|gb|EFY85143.1| RNA recognition motif containing protein [Metarhizium acridum CQMa
102]
Length = 309
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + +EEQI E+FSRAG++++ + D + P GF FA + + AV
Sbjct: 7 SRVVFVGNIPYGLSEEQITEIFSRAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSAV 66
Query: 125 KYISGTILDDRPIRVDF 141
+ ++ + R +RVDF
Sbjct: 67 RNLNDFEVMGRKLRVDF 83
>gi|297690283|ref|XP_002822554.1| PREDICTED: RNA-binding protein 7 [Pongo abelii]
Length = 267
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSGSSHASQ 93
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T YVGN+ TEE ++ELF +AG + + + D+ + G+ F F S ED + A+K
Sbjct: 25 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 126 YISGTILDDRPIRVDFD 142
++ L +PIRV+ D
Sbjct: 85 VLNMIKLYGKPIRVNKD 101
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + E+F++ G++ ++I+ +++++ GF F F + +D DA+ +
Sbjct: 7 LFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAGM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKTVDGRQIRVD 79
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
YVGN+ + + ++ +LFS GE+ + D+ S GF F S+E+ +DA+ +
Sbjct: 210 AYVGNLPWQVDDSRLVQLFSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISAL 269
Query: 128 SGTILDDRPIRVDF 141
G LD RP+RV+
Sbjct: 270 DGQELDGRPLRVNV 283
>gi|297707634|ref|XP_002830605.1| PREDICTED: putative RNA-binding protein 11 [Pongo abelii]
Length = 281
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ F F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|114640401|ref|XP_001151010.1| PREDICTED: RNA-binding protein 7 isoform 1 [Pan troglodytes]
gi|397467681|ref|XP_003805538.1| PREDICTED: RNA-binding protein 7 [Pan paniscus]
gi|410213740|gb|JAA04089.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410258170|gb|JAA17052.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410291802|gb|JAA24501.1| RNA binding motif protein 7 [Pan troglodytes]
gi|410332447|gb|JAA35170.1| RNA binding motif protein 7 [Pan troglodytes]
Length = 267
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|386782309|ref|NP_001248000.1| RNA-binding protein 7 [Macaca mulatta]
gi|355567065|gb|EHH23444.1| hypothetical protein EGK_06917 [Macaca mulatta]
gi|355752653|gb|EHH56773.1| hypothetical protein EGM_06248 [Macaca fascicularis]
gi|380808630|gb|AFE76190.1| RNA-binding protein 7 [Macaca mulatta]
gi|383414981|gb|AFH30704.1| RNA-binding protein 7 [Macaca mulatta]
Length = 267
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|410971965|ref|XP_003992431.1| PREDICTED: RNA-binding protein 7 [Felis catus]
Length = 266
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSG 87
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 52 PGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCF 111
P T F +S+ ++V +SF +T E + E FS+ GEI ++ + DK P G+ +
Sbjct: 20 PNTPLFFSTNSASSSRLFVKGISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAY 79
Query: 112 ALFYSREDTEDAVKYISGTILDDRPIRVD 140
F + + + A+ ++G ++D RP+ VD
Sbjct: 80 VTFATENEAKKALTEMNGKVIDGRPVFVD 108
>gi|355747455|gb|EHH51952.1| RNA-binding motif protein 11 [Macaca fascicularis]
Length = 281
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 38 KDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
KDQ+ ++DR + ++A S T++VGN+ F E+ + ELF G I I +
Sbjct: 378 KDQQ--GGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRL 435
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
D +S P GF + + S ++ A + G L RP+R+DF
Sbjct: 436 PTDPDSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDF 479
>gi|296216231|ref|XP_002754472.1| PREDICTED: RNA-binding protein 7 [Callithrix jacchus]
Length = 264
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSGSSHASQ 93
>gi|109065778|ref|XP_001083260.1| PREDICTED: putative RNA-binding protein 11 [Macaca mulatta]
gi|355560395|gb|EHH17081.1| RNA-binding motif protein 11 [Macaca mulatta]
Length = 281
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G ILD R +RV
Sbjct: 74 AMDGAILDGRELRV 87
>gi|9994185|ref|NP_057174.1| RNA-binding protein 7 [Homo sapiens]
gi|9978697|sp|Q9Y580.1|RBM7_HUMAN RecName: Full=RNA-binding protein 7; AltName: Full=RNA-binding
motif protein 7
gi|5070698|gb|AAD39257.1|AF156098_1 RNA binding motif protein 7 [Homo sapiens]
gi|21707920|gb|AAH34381.1| RNA binding motif protein 7 [Homo sapiens]
gi|119587651|gb|EAW67247.1| RNA binding motif protein 7, isoform CRA_b [Homo sapiens]
gi|189069167|dbj|BAG35505.1| unnamed protein product [Homo sapiens]
gi|208967360|dbj|BAG73694.1| RNA binding motif protein 7 [synthetic construct]
gi|312150136|gb|ADQ31580.1| RNA binding motif protein 7 [synthetic construct]
Length = 266
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|355715837|gb|AES05418.1| RNA binding motif protein 7 [Mustela putorius furo]
Length = 262
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSG 87
>gi|367042708|ref|XP_003651734.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
gi|346998996|gb|AEO65398.1| hypothetical protein THITE_2112338 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ +++GN+ + TT+ ++ LF ++ + + +D+ + P GF A F S E +A
Sbjct: 225 TAQLFIGNIPYETTDAELNRLFRGIENLRDVRVAVDRTTGWPRGFAHADFTSIEAAIEAK 284
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQ 159
K + GT+L +R +RVDF G+Q R RS Q
Sbjct: 285 KRLEGTMLGNRLLRVDFATGYQR-----RSRSPPQ 314
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
R PG + +E +V+V N+ F TEE + + FS+ GE+ + D + G
Sbjct: 117 RPAPGAMSKAQEI---QNSVFVRNLVFEVTEEHLQKAFSKYGEVASTFIARDPRGLS-KG 172
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPI 137
F F F + E E A ++G+ R I
Sbjct: 173 FGFVTFTTPEAVETACSQVNGSFWHGRRI 201
>gi|119587652|gb|EAW67248.1| RNA binding motif protein 7, isoform CRA_c [Homo sapiens]
Length = 267
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|392412892|ref|YP_006449499.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390626028|gb|AFM27235.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 109
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+AS +YVGN+SF T+E+Q+ ELF G+++ + DK + P GF F RE+
Sbjct: 1 MASINIYVGNLSFQTSEDQLKELFESFGQVESATIISDKTTGRPRGFGFVKMPEREEGLK 60
Query: 123 AVKYISGTILDDRPIRVD 140
A++ + R ++V+
Sbjct: 61 AIQELDARDFMGRNLKVN 78
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+SF T+E + FS G + + + D+ + P GF F F + E+++ A + +
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 128 SGTILDDRPIRVD-----FDWGFQDGRQWGRGRSGGQVRDEY 164
+GT L R I V+ G R +G R Q R+ Y
Sbjct: 65 NGTDLGGRAITVNEARPKEATGGGGSRNFGPDRKPFQSRNRY 106
>gi|336390019|gb|EGO31162.1| hypothetical protein SERLADRAFT_432817 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1167
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 56 EEFEEALLASTTVYVGNMSFYT----TEEQIYELFSRAG--EIKKIIMGLDKNSKTPCGF 109
EE E+ L TT++VG + Y EE++ FSR G E K++ ++K S F
Sbjct: 604 EEKRESALDPTTIFVGGLEMYGPNAWDEERVRNFFSRFGGVETVKVVRPVNKRS----AF 659
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFD---------WGFQDGR----QWGRGRS 156
F F + E AV +LD RPIRV W F GR Q+G R
Sbjct: 660 AFVKFDNTESPIRAVNEEHNRVLDGRPIRVQLRDWNPPHRAVWKFSRGRGRFQQFGATRH 719
Query: 157 GGQVRDEYRTDYDPDILLLTL 177
+ D+ D+ + LL+L
Sbjct: 720 SVEQADDQSEDFCTNTSLLSL 740
>gi|336376970|gb|EGO05305.1| hypothetical protein SERLA73DRAFT_157880 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1119
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 56 EEFEEALLASTTVYVGNMSFYT----TEEQIYELFSRAG--EIKKIIMGLDKNSKTPCGF 109
EE E+ L TT++VG + Y EE++ FSR G E K++ ++K S F
Sbjct: 549 EEKRESALDPTTIFVGGLEMYGPNAWDEERVRNFFSRFGGVETVKVVRPVNKRS----AF 604
Query: 110 CFALFYSREDTEDAVKYISGTILDDRPIRVDFD---------WGFQDGR----QWGRGRS 156
F F + E AV +LD RPIRV W F GR Q+G R
Sbjct: 605 AFVKFDNTESPIRAVNEEHNRVLDGRPIRVQLRDWNPPHRAVWKFSRGRGRFQQFGATRH 664
Query: 157 GGQVRDEYRTDYDPDILLLTL 177
+ D+ D+ + LL+L
Sbjct: 665 SVEQADDQSEDFCTNTSLLSL 685
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 277 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 336
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 337 DGRRIRVDF 345
>gi|62089092|dbj|BAD92990.1| Hypothetical protein FLJ11153 variant [Homo sapiens]
Length = 155
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F A+
Sbjct: 17 TLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSVPYAMNL 75
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQ 150
++G L RPI++ F G Q
Sbjct: 76 LNGIKLYGRPIKIQFRSGSSHAPQ 99
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+A R R +F A A YVGN+ + + ++ +LFS GE+ + D+ S
Sbjct: 203 AAPRGSRVERPPRQFAPAFRA----YVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRES 258
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ +DA+ + G LD RP+RV+
Sbjct: 259 GRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVN 295
>gi|311263944|ref|XP_003129925.1| PREDICTED: RNA-binding protein 7-like [Sus scrofa]
Length = 265
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSGSSHASQ 93
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+A R R +F A A YVGN+ + + ++ +LFS GE+ + D+ S
Sbjct: 204 AAPRGSRVERPPRQFAPAFRA----YVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRES 259
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ +DA+ + G LD RP+RV+
Sbjct: 260 GRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVN 296
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+A R R +F A A YVGN+ + + ++ +LFS GE+ + D+ S
Sbjct: 29 AAPRGSRVERPPRQFAPAFRA----YVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRES 84
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ +DA+ + G LD RP+RV+
Sbjct: 85 GRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVN 121
>gi|194743216|ref|XP_001954096.1| GF16912 [Drosophila ananassae]
gi|190627133|gb|EDV42657.1| GF16912 [Drosophila ananassae]
Length = 415
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ F F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens]
Length = 267
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSG 87
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ + N+S+ TT + F R G+I + + DK S+ GF F FY R D E A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 126 YISGTILDDRPIRV 139
G ++D R +RV
Sbjct: 79 RTDGKLVDGRELRV 92
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + + ++K P F F F+ R D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSDAQDAEAA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQD----------GRQWG 152
+ G +LD R +RV +G +D GR WG
Sbjct: 75 MDGAVLDGRELRVQMARYGRRDLPRSSQEEPSGRSWG 111
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 227 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 286
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 287 DGRRIRVDF 295
>gi|170095009|ref|XP_001878725.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646029|gb|EDR10275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 62 LLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTE 121
+ AS V+VGN+ + E+Q+ ++F G++ + D+++ P G+ F F E
Sbjct: 1 MAASKVVFVGNVPYNMAEDQLIDVFKSVGQVIGFRLSYDRDTGKPKGYGFCEFADHETAM 60
Query: 122 DAVKYISGTILDDRPIRVDF 141
AV+ ++G + RP+R+D
Sbjct: 61 SAVRNLNGVDVGGRPLRIDL 80
>gi|403262742|ref|XP_003945221.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 266
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLYGRPIKIQFRSGSSHASQ 93
>gi|395844114|ref|XP_003794810.1| PREDICTED: RNA-binding protein 7 [Otolemur garnettii]
Length = 264
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSG 87
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 49/79 (62%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
A+ ++YVG++ EEQ+Y+LFS+ ++ + + D+ ++ G+ + F + +D +
Sbjct: 42 FANLSLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAAN 101
Query: 123 AVKYISGTILDDRPIRVDF 141
A+K ++ T L+ +PIR+ F
Sbjct: 102 AMKALNFTPLNGKPIRIMF 120
>gi|355725838|gb|AES08680.1| transformer 2 beta-like protein [Mustela putorius furo]
Length = 297
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 183 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 242
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 243 DGRRIRVDF 251
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+ V N+++ T+ + + +F + G + + + + ++K P GF F F+ R D +DA
Sbjct: 15 TLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRSDAQDAEAA 74
Query: 127 ISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 75 MDGAVLDGRELRV 87
>gi|440635199|gb|ELR05118.1| hypothetical protein GMDG_07160 [Geomyces destructans 20631-21]
Length = 318
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S +V+VGN+ + TEEQI ++FS AG++ + D+ + P GF FA + + A
Sbjct: 6 PSKSVFVGNIPYGLTEEQIIDIFSSAGKVVNFRLVYDRETGRPKGFGFAEYPDSDSAASA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + +R +RVDF
Sbjct: 66 VRNLNDYEIMNRKLRVDF 83
>gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]
Length = 437
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|291383856|ref|XP_002708466.1| PREDICTED: RNA binding motif protein 7 [Oryctolagus cuniculus]
Length = 266
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSG 87
>gi|431908299|gb|ELK11897.1| RNA-binding protein 7 [Pteropus alecto]
Length = 264
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A+ ++G L RPI++ F G Q
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSGSSHASQ 93
>gi|195343246|ref|XP_002038209.1| GM17877 [Drosophila sechellia]
gi|194133059|gb|EDW54627.1| GM17877 [Drosophila sechellia]
Length = 419
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|47682782|gb|AAH70262.1| RNA binding motif protein 7 [Homo sapiens]
Length = 266
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIRLYGRPIKIQFRSG 87
>gi|440893645|gb|ELR46339.1| Putative RNA-binding protein 11 [Bos grunniens mutus]
Length = 246
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|344293100|ref|XP_003418262.1| PREDICTED: RNA-binding protein 7-like [Loxodonta africana]
Length = 268
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 10/160 (6%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AAEADRTLFVGNLEAKVTEEILFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG----FQDGRQWGRGRSGGQVRDEYRTDYDPDILLLT 176
A+ ++G L RPI++ F G QD GG T P
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSGSSHALQDVSMPHSQYHGGNS-SPTATPTSPSRYERP 122
Query: 177 LLNFMCWSDVVNISFHRTEAFNSFGGGDAYKSV-NHLICG 215
+ N + + + SF E F K+V H+ CG
Sbjct: 123 MDNMIPSAQTIQRSFSSPENFQRQA---VMKNVLRHMSCG 159
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ F F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + E+FS G+I ++ + D++++ GF F F + D +DA+ +
Sbjct: 7 LFVGGLSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLAM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKSIDGRQIRVD 79
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 32 AMASLFKDQRKLSAYRDRRFPGTQEEFEEALLAST-----TVYVGNMSFYTTEEQIYELF 86
AMA+L + R L++ G+ LLA + ++VG +S + TEE + E F
Sbjct: 2 AMAALREASRCLASR------GSPAAARSMLLAQSRGITYKLFVGGLSQFATEESLAEAF 55
Query: 87 SRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
SR G++ + + DK + P GF F F S E+ +A + ++G L+ R I VD
Sbjct: 56 SRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREEMNGKALNGRVIYVDIAKAKP 115
Query: 147 D 147
D
Sbjct: 116 D 116
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST ++V +SFYTTEE+ ++FS G +++ + D + GF F + S+ + E AV
Sbjct: 20 STEIFVSRLSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAV 79
Query: 125 KYISGTILDDRPIRVDFDWGFQD 147
K + G IL R I V+ G +
Sbjct: 80 KAMDGKILRGRLIFVEMAKGHES 102
>gi|126326634|ref|XP_001371053.1| PREDICTED: RNA-binding protein 7-like isoform 1 [Monodelphis
domestica]
Length = 276
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F E
Sbjct: 8 ADRTLFVGNLDCKVTEELLFELFHQAGPVIKVKIPKDKDGK-PKQFAFVNFKHEESVPYG 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI++ F G
Sbjct: 67 MNLLNGIKLFGRPIKIQFRSG 87
>gi|449494200|ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 63 LASTT---VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+AST V+VGN+ + TEEQ+ E+ G + + +D+ + P G+ F + E
Sbjct: 1 MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
Query: 120 TEDAVKYISGTILDDRPIRVDF---DWGFQDGRQWGRGRSG 157
A + + G ++ R +RVDF D G R+ GRG G
Sbjct: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG 101
>gi|94966923|ref|NP_001035657.1| putative RNA-binding protein 11 [Bos taurus]
gi|74267635|gb|AAI02761.1| RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
+ T++VGN+SF E I E F G IK + + D+ + P GF + S E+ + A
Sbjct: 347 AATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAAF 406
Query: 125 KYISGTILDDRPIRVDF 141
+ G + RPIR+D+
Sbjct: 407 TALQGADIAGRPIRLDY 423
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VGN+S+ EE + F GE+ + + D++S GF + F ++ + A++
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAK 303
Query: 128 SGTILDDRPIRVDF 141
+G LD R +R+DF
Sbjct: 304 NGAELDGRELRLDF 317
>gi|358410117|ref|XP_003581718.1| PREDICTED: putative RNA-binding protein 11-like [Bos taurus]
gi|296491598|tpg|DAA33639.1| TPA: RNA binding motif protein 11 [Bos taurus]
Length = 246
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|195569859|ref|XP_002102926.1| GD19237 [Drosophila simulans]
gi|194198853|gb|EDX12429.1| GD19237 [Drosophila simulans]
Length = 419
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|195452858|ref|XP_002073531.1| GK14167 [Drosophila willistoni]
gi|194169616|gb|EDW84517.1| GK14167 [Drosophila willistoni]
Length = 401
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 18 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 77
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 78 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 122
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ T +YV +SF TTEE + F G++ ++ + +DK + P GF F + + E++E
Sbjct: 76 IPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEK 135
Query: 123 AVKYISGTILDDRPIRVDFDWGFQDGRQ 150
A++ + G LD R I V+ + RQ
Sbjct: 136 AIEGMHGKFLDGRVIFVEVAKPRSELRQ 163
>gi|1843458|gb|AAB81555.1| Rbm [Mus musculus]
Length = 380
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++ T ++ + E+F R G + ++I+ D+ +K GF F F D ++AVK +
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEM 69
Query: 128 SGTILDDRPIRV 139
+G ILD + I+V
Sbjct: 70 NGVILDGKRIKV 81
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ + N+S+ TT + F R G+I + + DK S+ GF F FY R D E A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 126 YISGTILDDRPIRV 139
G ++D R +RV
Sbjct: 79 RTDGKLVDGRELRV 92
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+VYVGN F +TE++I + FS+ G + + + D+ + P GF F + + + AV
Sbjct: 6 SVYVGNAPFQSTEQEIGDFFSQKGNVTNVRIVYDRETGRPRGFAFVEYSDEQSAQRAVNE 65
Query: 127 ISGTILDDRPIRVDF 141
++G + R +RV+
Sbjct: 66 LNGADFNGRQLRVNL 80
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN++F TTEEQ+ ++FS G + + + D ++ P GF F F + A++ +
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 128 SGTILDDRPIRVDF 141
+ L+ R IRV+F
Sbjct: 61 NDYELNGRRIRVNF 74
>gi|449446484|ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 63 LASTT---VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRED 119
+AST V+VGN+ + TEEQ+ E+ G + + +D+ + P G+ F + E
Sbjct: 1 MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
Query: 120 TEDAVKYISGTILDDRPIRVDF---DWGFQDGRQWGRGRSG 157
A + + G ++ R +RVDF D G R+ GRG G
Sbjct: 61 ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG 101
>gi|281354031|gb|EFB29615.1| hypothetical protein PANDA_003724 [Ailuropoda melanoleuca]
Length = 249
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 162 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 221
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 222 DGRRIRVDF 230
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
STT++VGN+S+ TTE+ ++ F G++ + + D+ S P GF + F +E A
Sbjct: 207 PSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKA 266
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G LD R +R+D+
Sbjct: 267 YEAMKGKDLDGRTLRLDY 284
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
K A + P + + + S TV+VG +S+ + + + F G + + +D+
Sbjct: 86 KRKAEEPAQTPAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDR 145
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ 146
NS GF + F S + + AV+ ++G +D R + VD Q
Sbjct: 146 NSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDGREVNVDISQPRQ 190
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++ V N+++ T E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 15 SLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMDA 74
Query: 127 ISGTILDDRPIRVDF-DWGFQDGRQWGRGRSG 157
+ G +LD R +RV +G +G GR G
Sbjct: 75 MDGALLDGRELRVQMARYGRPPDSHYGGGRRG 106
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+A R R +F A A YVGN+ + + ++ +LFS GE+ + D+ +
Sbjct: 184 AAQRGSRVERPPRQFASAFRA----YVGNLPWQAEDSRLVQLFSEHGEVLNATVVYDRET 239
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ +DA+ + G LD RP+RV+
Sbjct: 240 GRSRGFGFVTMASKEELDDAISALDGQELDGRPLRVN 276
>gi|198436643|ref|XP_002128347.1| PREDICTED: similar to homology with RNA-binding proteins in
meristematic tissue [Ciona intestinalis]
Length = 202
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S ++VG++ F TE+ + E FS GEI+ I++ DK ++ GF F F + E A+
Sbjct: 8 SHKIFVGSIDFKATEKDVEEAFSHIGEIEHIVLLKDKETQKSRGFGFITFKDKNSVELAI 67
Query: 125 KYISGTILDDRPIRVDF 141
++ I+ RPI V++
Sbjct: 68 SSMNHKIIMGRPIVVNY 84
>gi|194900156|ref|XP_001979623.1| GG22991 [Drosophila erecta]
gi|190651326|gb|EDV48581.1| GG22991 [Drosophila erecta]
Length = 416
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|302840391|ref|XP_002951751.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
gi|300262999|gb|EFJ47202.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
Length = 924
Score = 53.1 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+T + VGN++ TE+ I E+FS G +K + + +D+ P GF + S ED E A
Sbjct: 45 GATRLVVGNLTRNVTEDHIREIFSCYGVLKSVELAMDRAVNLPRGFAHVEYESHEDAERA 104
Query: 124 VKYISGTILDDRPIRVDF 141
+ +++ +D +RV+F
Sbjct: 105 LDFMNNGQIDGNAVRVNF 122
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGAVLDGRELRV 87
>gi|346979364|gb|EGY22816.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 306
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + +EEQI ++FS AG++ + D+ + P GF FA + + AV
Sbjct: 6 SRVVFVGNIPYGLSEEQITDIFSSAGKVINFRLVYDRETGRPKGFGFAEYPDHDSAASAV 65
Query: 125 KYISGTILDDRPIRVDF-DWGFQDGRQWGRGRSG 157
+ ++ R +RVDF + G D + +GR G
Sbjct: 66 RNLNDYETMGRKLRVDFSNEGGTDDNDFNQGRDG 99
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEE-ALLASTTVYVGNMSFYTTEEQIYELFSR 88
LS + +F Q S R P F+ ++S+ V+VG +S+ T ++++ E F++
Sbjct: 4 LSKVGKIFS-QSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTK 62
Query: 89 AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
GE+ + + +D+++ GF F F + ED A++ + G LD R IR +
Sbjct: 63 YGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSY 115
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 30 LSAMASLFKDQRKLSAYRDRRFPGTQEEFEE-ALLASTTVYVGNMSFYTTEEQIYELFSR 88
LS + +F Q S R P F+ ++S+ V+VG +S+ T ++++ E F++
Sbjct: 4 LSKVGKIFS-QSSASGIRSHFQPSNLSVFQTLRFMSSSKVFVGGLSYGTDDQRLTEAFTK 62
Query: 89 AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
GE+ + + +D+++ GF F F + ED A++ + G LD R IR +
Sbjct: 63 YGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSY 115
>gi|395394008|ref|NP_001257441.1| RNA-binding motif protein, Y chromosome, family 1 member B [Mus
musculus]
gi|341942161|sp|Q60990.3|RBY1B_MOUSE RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B; AltName: Full=RNA-binding motif protein 1
Length = 380
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++ T ++ + E+F R G + ++I+ D+ +K GF F F D ++AVK +
Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRPADAKNAVKEM 69
Query: 128 SGTILDDRPIRV 139
+G ILD + I+V
Sbjct: 70 NGVILDGKRIKV 81
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ SK GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGALLDGRELRV 87
>gi|301757276|ref|XP_002914487.1| PREDICTED: putative RNA-binding protein 11-like [Ailuropoda
melanoleuca]
gi|281347610|gb|EFB23194.1| hypothetical protein PANDA_002377 [Ailuropoda melanoleuca]
Length = 238
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D+ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKTFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
+A R R +F A A YVGN+ + + ++ +LFS GE+ + D+ S
Sbjct: 92 AAPRGSRVERPPRQFAPAFRA----YVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRES 147
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ +DA+ + G LD RP+RV+
Sbjct: 148 GRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVN 184
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 49/73 (67%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++++TT+E +YE FS+ G I++ ++ D+++ GF F F ++ + ++A++ +
Sbjct: 4 LFIGGLAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQRM 63
Query: 128 SGTILDDRPIRVD 140
+ T D R IRVD
Sbjct: 64 NNTQFDGRLIRVD 76
>gi|401887270|gb|EJT51267.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
gi|406702339|gb|EKD05370.1| RNA binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 393
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 68 VYVGNMSFYTTEEQIYELFSR-AGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
VYVGN++F TE ++ E FS+ GEI +I+ S+ P G+ F F D AV+
Sbjct: 37 VYVGNLAFAATEAEVREHFSKVGGEILSVILPTRFKSRRPAGYAFVTFKDEADANKAVET 96
Query: 127 ISGTILDDRPIRV 139
++ T + DR I++
Sbjct: 97 LNETEIGDRKIQL 109
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST VYVGN+S+ TT++ + E FS G++ I+ D+ + GF F F S ++ E A+
Sbjct: 2 STKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAI 61
Query: 125 KYISGTILDDRPIRVDF 141
+ LD R I+V+
Sbjct: 62 NSLHEQDLDGRRIKVNL 78
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T++VGN+SF EE + FS +K + + D S P GF + FYS ED++ A
Sbjct: 269 SDTLFVGNLSFDADEETVSAFFSEVANVKSLRLPTDMESGRPKGFGYVSFYSLEDSKKAF 328
Query: 125 KYISGTILDDRPIRVDF 141
++G R +R+D+
Sbjct: 329 DTLNGQSCAGRNVRLDY 345
Score = 36.6 bits (83), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 59 EEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSRE 118
EE S+T++VGN+S+ + +Y+ F + + D+ ++ GF + F S E
Sbjct: 159 EEEGETSSTLFVGNLSWNVDDSVLYDEFKGFDGLTGARVITDRETQRSRGFGYVEFDSVE 218
Query: 119 DTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG----RGRSGGQVRDEYRTDYDPDILL 174
+ A ++G LD R +++DF G R + G V T + D L
Sbjct: 219 HAQAAFDKMTGYFLDGRELKIDFSTGRAKSNDANPAASRAKKYGDV-----TSPESDTLF 273
Query: 175 LTLLNFMCWSDVVNISF 191
+ L+F + V+ F
Sbjct: 274 VGNLSFDADEETVSAFF 290
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 48/77 (62%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
ST+VYVG++ +E Q+YE+FS+ G + I + D ++ G+ + ++S +D A+
Sbjct: 23 STSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRAL 82
Query: 125 KYISGTILDDRPIRVDF 141
+ ++ T ++ +PIR+ F
Sbjct: 83 ELLNFTPVNGKPIRIMF 99
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
VYV N+ TT++++ ++F G I ++ D K+ C F F F +D AV+
Sbjct: 203 NNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKC-FGFVNFELADDAAKAVE 261
Query: 126 YISGTILDDR 135
++G D++
Sbjct: 262 ALNGKKQDEK 271
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+YVGN+S+ TEE++ E+F+ GEI + + DK + GF F + D E A+K +
Sbjct: 3 IYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKEL 62
Query: 128 SGTILDDRPIRVD 140
+G + I+V+
Sbjct: 63 NGKTIKGMSIKVN 75
>gi|17137710|ref|NP_477453.1| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|5713194|gb|AAD47839.1|AF170082_1 cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|23171661|gb|AAF55577.2| cleavage stimulation factor 64 kilodalton subunit [Drosophila
melanogaster]
gi|205360993|gb|ACI03573.1| FI01908p [Drosophila melanogaster]
Length = 419
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 37 FKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKII 96
F + R +A RDR Q ++ S T+++GN++F E I E F+ G I +
Sbjct: 306 FANARSNAAPRDRAQSRAQNFGDQKSPESDTLFIGNIAFSADESMISETFAEYGSILGVR 365
Query: 97 MGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQD 147
+ D S P GF + F S ++ A + ++G+ L R +R+DF Q+
Sbjct: 366 LPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQN 416
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++GN+S+ EE + F GE+ + + D++S GF + F + ED A
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKAHAAK 292
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILLLTLLNFMCWSDVV 187
T LD R + VDF + R +S Q + ++ + D L + + F ++
Sbjct: 293 KDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFGDQKS-PESDTLFIGNIAFSADESMI 351
Query: 188 NISF 191
+ +F
Sbjct: 352 SETF 355
>gi|401839791|gb|EJT42839.1| HSH49-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 213
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
+ +TVYVGN+ T++Q+YELF + + +I DK +T G+ F FY++ED E
Sbjct: 7 SDSTVYVGNIDPRITKDQLYELFIQINPVLRIKYPKDKVLQTYQGYAFIEFYNKEDAEYV 66
Query: 124 VKYISGTI-LDDRPIRV 139
++ ++ T+ L DR I+V
Sbjct: 67 IQIMNNTVKLYDRLIKV 83
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
AS TV+V N+ + +EEQ+ +FS AG + + + D N+ G+ F FY A
Sbjct: 5 ASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSA 64
Query: 124 VKYISGTILDDRPIRVDFDWGFQDGRQWGRG 154
V+ + ++ R +RV+ R+ G G
Sbjct: 65 VRNLQDAPVNGRNLRVELSTDEPGPRRRGAG 95
>gi|397635556|gb|EJK71910.1| hypothetical protein THAOC_06607 [Thalassiosira oceanica]
Length = 293
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+ GN++F TTEEQ+Y FS G++ K+ M +D+ + GF F F + A++ +
Sbjct: 161 VFCGNLAFNTTEEQLYNAFSEIGKVVKVRMVVDQETGKMRGFSFIEFEDPQAALSAIRNM 220
Query: 128 SGTILDDRPIRVDFD 142
+ ++ R +RV+F
Sbjct: 221 NDYEMNGRKLRVNFS 235
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
+ S +YVGN+ F EE I ++FS G I+ + M D+ + GF F + + E+ E+
Sbjct: 1 MISKKIYVGNLKFTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEE 60
Query: 123 AVKYISGTILDDRPIRVDF 141
AV ++G +D R ++V F
Sbjct: 61 AVTQMNGQPVDGRNLKVTF 79
>gi|345799921|ref|XP_853905.2| PREDICTED: RNA-binding protein 7 [Canis lupus familiaris]
Length = 262
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A T++VGN+ TEE ++ELF +AG + K+ + DK+ K P F F F
Sbjct: 5 AEEADRTLFVGNLETKVTEELLFELFHQAGPVVKVKIPKDKDGK-PKQFAFVNFKHEVSV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
A+ ++G L RPI++ F G
Sbjct: 64 PYAMNLLNGIKLFGRPIKIQFRSG 87
>gi|242820506|ref|XP_002487523.1| nucleic acid-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218713988|gb|EED13412.1| nucleic acid-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 411
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 53/101 (52%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++Y+GN+++ ++ ++ ++F + ++ + +D+ S +P GF A F + A++
Sbjct: 301 SLYIGNLAYDLSDRELNDIFKSVRNVVEVRVAVDRQSGSPRGFAHADFLDIPSAQAALEI 360
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTD 167
+S R +RVDF G + GR+ R ++ E T+
Sbjct: 361 LSSKAPHGRRLRVDFSQGVKKGRREPRDQAAANTETENATN 401
>gi|449489183|ref|XP_004176732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 7 [Taeniopygia
guttata]
Length = 272
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
A A+ T++VGN+ TEE I+ELF +AG + + + D++ + P F F F E
Sbjct: 5 AAEANRTLFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDGR-PKQFAFVNFKHEESV 63
Query: 121 EDAVKYISGTILDDRPIRVDFDWG 144
++ ++G L RP+R+ F G
Sbjct: 64 PYGLRLLNGIXLYGRPMRIQFRSG 87
>gi|195497709|ref|XP_002096214.1| GE25546 [Drosophila yakuba]
gi|194182315|gb|EDW95926.1| GE25546 [Drosophila yakuba]
Length = 414
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEI--KKIIMGLDKNSKTPCGFCFALFYSREDTED 122
ST +++G +S+ T E+ + E FS+ GE+ +IIM D+ + GF F + S E+
Sbjct: 41 STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIM--DRETGRSRGFGFITYTSVEEASS 98
Query: 123 AVKYISGTILDDRPIRVDF 141
A++ + G L RPIRV++
Sbjct: 99 AIQALDGQDLHGRPIRVNY 117
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 136 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 195
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 196 DGRRIRVDF 204
>gi|356535727|ref|XP_003536395.1| PREDICTED: uncharacterized protein LOC100794399 [Glycine max]
Length = 545
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN+ + TEEQ+ E+ G + + +D+ + P G+ F + E A + +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 128 SGTILDDRPIRVDF---DWGFQDGRQWGRGRSG 157
G ++ R +RVDF D G R+ GRG G
Sbjct: 71 QGYEINGRQLRVDFAENDKGNDRNREQGRGGPG 103
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + + FS G I ++++ D+ ++ GF F F + E DA++ +
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQW------GRGRS 156
+G LD R IRVD G + GRGRS
Sbjct: 68 NGESLDGRQIRVDHAGKSARGSRGGAFGAHGRGRS 102
>gi|291400295|ref|XP_002716399.1| PREDICTED: splicing factor, arginine/serine-rich 10 [Oryctolagus
cuniculus]
Length = 240
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 77 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 136
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 137 DGRRIRVDF 145
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 44 SAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNS 103
++ R R Q +F A A YVGN+ + + ++ +LFS GE+ + D+ +
Sbjct: 29 ASSRGTRMERPQRQFAPAFRA----YVGNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRET 84
Query: 104 KTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVD 140
GF F S+E+ DA+ + G LD RP+RV+
Sbjct: 85 GRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVN 121
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S VYVGN+S+ TT+E + FS G+I I+ D+++ GF F F S + ++A+
Sbjct: 2 SAKVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAI 61
Query: 125 KYISGTILDDRPIRVDF 141
++ LD R IRV+
Sbjct: 62 ASLNEQDLDGRRIRVNL 78
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 89 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 148
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 149 DGRRIRVDF 157
>gi|4759098|ref|NP_004584.1| transformer-2 protein homolog beta isoform 1 [Homo sapiens]
gi|6677975|ref|NP_033212.1| transformer-2 protein homolog beta [Mus musculus]
gi|16923966|ref|NP_476460.1| transformer-2 protein homolog beta [Rattus norvegicus]
gi|77736495|ref|NP_001029948.1| transformer-2 protein homolog beta [Bos taurus]
gi|116175275|ref|NP_001070689.1| transformer-2 protein homolog beta [Sus scrofa]
gi|386780576|ref|NP_001248265.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|114590871|ref|XP_530672.2| PREDICTED: transformer-2 protein homolog beta isoform 3 [Pan
troglodytes]
gi|194222668|ref|XP_001497871.2| PREDICTED: transformer-2 protein homolog beta-like isoform 1 [Equus
caballus]
gi|296224784|ref|XP_002758193.1| PREDICTED: transformer-2 protein homolog beta [Callithrix jacchus]
gi|332215039|ref|XP_003256645.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Nomascus
leucogenys]
gi|345796409|ref|XP_535833.3| PREDICTED: transformer-2 protein homolog beta [Canis lupus
familiaris]
gi|354484188|ref|XP_003504272.1| PREDICTED: transformer-2 protein homolog beta-like [Cricetulus
griseus]
gi|395839823|ref|XP_003792775.1| PREDICTED: transformer-2 protein homolog beta [Otolemur garnettii]
gi|397470084|ref|XP_003806663.1| PREDICTED: transformer-2 protein homolog beta [Pan paniscus]
gi|402860695|ref|XP_003894758.1| PREDICTED: transformer-2 protein homolog beta [Papio anubis]
gi|403270092|ref|XP_003927029.1| PREDICTED: transformer-2 protein homolog beta-like [Saimiri
boliviensis boliviensis]
gi|410970819|ref|XP_003991874.1| PREDICTED: transformer-2 protein homolog beta [Felis catus]
gi|426217758|ref|XP_004003119.1| PREDICTED: transformer-2 protein homolog beta [Ovis aries]
gi|426343199|ref|XP_004038202.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Gorilla
gorilla gorilla]
gi|51703329|sp|P62997.1|TRA2B_RAT RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=RA301; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; Short=hTRA2-beta; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Silica-induced gene 41
protein; Short=SIG-41; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|1255683|dbj|BAA08556.1| RNA binding protein (transformer-2-like) [Rattus norvegicus]
gi|1279558|emb|CAA56518.1| SIG41 [Mus musculus]
gi|1418286|gb|AAC28242.1| htra2-beta [Homo sapiens]
gi|1553035|gb|AAB08701.1| transformer-2 beta [Homo sapiens]
gi|4377848|gb|AAD19277.1| transformer-2-beta isoform 1 [Homo sapiens]
gi|12652815|gb|AAH00160.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|12653363|gb|AAH00451.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|13543480|gb|AAH05898.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|26340312|dbj|BAC33819.1| unnamed protein product [Mus musculus]
gi|38174351|gb|AAH61177.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Mus musculus]
gi|47477836|gb|AAH70948.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|73586673|gb|AAI03114.1| Transformer 2 beta homolog (Drosophila) [Bos taurus]
gi|115371737|gb|ABI96193.1| TRA2B [Sus scrofa]
gi|119598612|gb|EAW78206.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_b [Homo sapiens]
gi|123980068|gb|ABM81863.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|148665208|gb|EDK97624.1| mCG127344, isoform CRA_a [Mus musculus]
gi|149019900|gb|EDL78048.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|157928074|gb|ABW03333.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|296491312|tpg|DAA33375.1| TPA: transformer-2 protein homolog beta [Bos taurus]
gi|307685141|dbj|BAJ20501.1| transformer 2 beta homolog [synthetic construct]
gi|344239811|gb|EGV95914.1| Transformer-2 protein-like beta [Cricetulus griseus]
gi|380815584|gb|AFE79666.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|383420761|gb|AFH33594.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|410211132|gb|JAA02785.1| transformer 2 beta homolog [Pan troglodytes]
gi|410264594|gb|JAA20263.1| transformer 2 beta homolog [Pan troglodytes]
gi|410302962|gb|JAA30081.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGAVLDGRELRV 87
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 91 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 150
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 151 DGRRIRVDF 159
>gi|326913169|ref|XP_003202913.1| PREDICTED: putative RNA-binding protein 11-like [Meleagris
gallopavo]
Length = 221
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A T++VGN+ EE +YELF +AG + K+ + DK K P F F F +E A
Sbjct: 10 ADRTLFVGNLESRVREEILYELFLQAGPLTKVTICKDKEGK-PKSFGFVCFKHKESVPYA 68
Query: 124 VKYISGTILDDRPIRVDFDW 143
+ ++G L RPI+V + +
Sbjct: 69 IALLNGIRLYGRPIKVRYRY 88
>gi|402862668|ref|XP_003895669.1| PREDICTED: putative RNA-binding protein 11 [Papio anubis]
Length = 281
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A TV+VGN+ EE +YELF +AG + K+ + D+ K P F F F E A
Sbjct: 8 ADRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGK-PKSFGFVCFKHPESVSYA 66
Query: 124 VKYISGTILDDRPIRVDFDWG 144
+ ++G L RPI V + +G
Sbjct: 67 IALLNGIRLYGRPINVQYRFG 87
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGAVLDGRELRV 87
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T ++V + YTT+EQ+ +LFS G + + + LD +K P GF F F S + E A++
Sbjct: 7 TKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALR 66
Query: 126 YISGTILDDRPIRVDF 141
++G I+ R I V+
Sbjct: 67 AMNGRIVSGRLILVEL 82
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|119598613|gb|EAW78207.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_c [Homo sapiens]
Length = 289
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|392560296|gb|EIW53479.1| hypothetical protein TRAVEDRAFT_60908 [Trametes versicolor
FP-101664 SS1]
Length = 392
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + E+ + ++F G++ + + D+ + P G+ F F E AV
Sbjct: 2 SKVVFVGNVPYNMGEDSLIDVFKSVGQVVGLRLVFDRETGKPKGYGFCEFADHETALSAV 61
Query: 125 KYISGTILDDRPIRVDF--DWGFQDGRQWGRGR--SGGQVRDEYR 165
+ ++G + RP+R+D F +G+ RG GG+ R ++R
Sbjct: 62 RNLNGQEIGGRPLRIDLADSDPFLEGKTTVRGEIIDGGETRAQWR 106
>gi|356574567|ref|XP_003555417.1| PREDICTED: uncharacterized protein LOC100806489 [Glycine max]
Length = 544
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
V+VGN+ + TEEQ+ E+ G + + +D+ + P G+ F + E A + +
Sbjct: 11 VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 70
Query: 128 SGTILDDRPIRVDF---DWGFQDGRQWGRGRSG 157
G ++ R +RVDF D G R+ GRG G
Sbjct: 71 QGYEINGRQLRVDFAENDKGNDRNREQGRGGPG 103
>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) variant [Homo sapiens]
Length = 278
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 113 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 172
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 173 DGRRIRVDF 181
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 112 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 171
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 172 DGRRIRVDF 180
>gi|395536427|ref|XP_003770219.1| PREDICTED: transformer-2 protein homolog beta-like [Sarcophilus
harrisii]
Length = 288
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|351709599|gb|EHB12518.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 290
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|326327708|pdb|2KXN|B Chain B, Nmr Structure Of Human Tra2beta1 Rrm In Complex With
Aagaac Rna
Length = 129
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 54 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 113
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 114 DGRRIRVDF 122
>gi|355559800|gb|EHH16528.1| hypothetical protein EGK_11817, partial [Macaca mulatta]
gi|355746830|gb|EHH51444.1| hypothetical protein EGM_10813, partial [Macaca fascicularis]
Length = 288
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 52.8 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S T+ V N+S+ TEE + E+F +A I+ N P GF F F + ED ++A+
Sbjct: 463 SKTLVVNNLSYDATEESLQEVFEKASAIRIP----QNNQGRPKGFAFVDFATAEDAKEAM 518
Query: 125 KYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
+ T ++ R IR++F Q G+ +GR G
Sbjct: 519 NSCNNTEIEGRAIRLEFS--TQGGQNRNQGRGG 549
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|224077330|ref|XP_002305214.1| predicted protein [Populus trichocarpa]
gi|222848178|gb|EEE85725.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 43 LSAYRDRRFPGTQEEFEEALLAS--------TTVYVGNMSFYTTEEQIYELFSRAGEIKK 94
+ + R R P + E+++ A+ T +YV N+ + T E I ELF+ G++K+
Sbjct: 72 MPSRRIRSLPWQHDLLEDSIRAAGITGLEVGTKLYVSNLDYGVTNEDIRELFAEIGDLKR 131
Query: 95 IIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
+ DKN ++ G ++ R D A+K + +LD RP++++
Sbjct: 132 FAVHYDKNGRS-TGSAEVMYTRRSDAFSALKKYNNVLLDGRPMKIEI 177
>gi|196005405|ref|XP_002112569.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
gi|190584610|gb|EDV24679.1| hypothetical protein TRIADDRAFT_56724 [Trichoplax adhaerens]
Length = 316
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEEQ+ ++F AG + + D+ S P G+ F F +E A++
Sbjct: 14 SVFVGNIPYEATEEQLKDIFGSAGPVVSFRLVYDRESGKPKGYGFCEFQDKETALSAMRN 73
Query: 127 ISGTILDDRPIRVDFDWGFQD 147
+SG L+ R +RVD +D
Sbjct: 74 LSGYELNGRSLRVDSAASEKD 94
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 55 QEEFEEALLAST-TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFAL 113
Q++F +A T T++ GN+SF TE+ + E F+ G + I + D+++ P GF +
Sbjct: 334 QQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVE 393
Query: 114 FYSREDTEDAVKYISGTILDDRPIRVDF 141
S E+ + A + G + RP+R+D+
Sbjct: 394 MGSVEEAQAAFNALQGQDVGGRPVRLDY 421
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
A +++GN+S+ EE + F GE+ + + D++S GF + F + ED A
Sbjct: 238 AVANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKA 297
Query: 124 VKYISGTILDDRPIRVDF 141
++ + ++LD+R IRVDF
Sbjct: 298 LEAKNESLLDNRNIRVDF 315
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
++ V N+++ T++E + + F + GE+ + + D ++ GF F +Y + D EDA+
Sbjct: 12 VSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAEDAID 71
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 72 SMDGAVLDGRELRV 85
>gi|406946237|gb|EKD77506.1| glycine-rich RNA-binding protein [uncultured bacterium]
Length = 113
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 63 LASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTED 122
++ + +YVGN+S+ TTE+++ + FS+ G I+ I + +D N+ GF F + S +D E
Sbjct: 1 MSQSKIYVGNLSYNTTEDELRDYFSQFGNIEDIKLIIDFNTGRSKGFGFITYASIQDCES 60
Query: 123 AVKYISGTILDDRPIRVD 140
AV +G + R ++V+
Sbjct: 61 AVTTANGVDMGGRKLKVN 78
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGALLDGRELRV 87
>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [Mus musculus]
gi|417409256|gb|JAA51145.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 276
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 113 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 172
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 173 DGRRIRVDF 181
>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 113 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 172
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 173 DGRRIRVDF 181
>gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus musculus]
Length = 229
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 125 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 184
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 185 DGRRIRVDF 193
>gi|116624848|ref|YP_827004.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228010|gb|ABJ86719.1| RNP-1 like RNA-binding protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 97
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
++VGN+SF TE+ + LF G++ ++ + D++S P GF F + + E A+
Sbjct: 3 NIFVGNLSFGATEDTVRALFETHGKVDRVNICTDRDSGQPRGFGFVEMANDSEAEKAISA 62
Query: 127 ISGTILDDRPIRVD 140
++G LD R + V+
Sbjct: 63 VNGKELDGRALNVN 76
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGAVLDGRELRV 87
>gi|347830477|emb|CCD46174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S +V+VGN+ + TEEQI ++FS AG + + D+ + P GF FA + + A
Sbjct: 6 PSKSVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + +R +RVDF
Sbjct: 66 VRNLNDYEIMNRKLRVDF 83
>gi|154290312|ref|XP_001545753.1| hypothetical protein BC1G_15665 [Botryotinia fuckeliana B05.10]
Length = 322
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S +V+VGN+ + TEEQI ++FS AG + + D+ + P GF FA + + A
Sbjct: 6 PSKSVFVGNIPYGLTEEQIIDIFSSAGNVVNFRLVYDRETGRPKGFGFAEYPDSDSAASA 65
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + +R +RVDF
Sbjct: 66 VRNLNDYEIMNRKLRVDF 83
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 66 TTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVK 125
T++ V N+++ T+ E + +F + G + + + D+ +K GF F F+ + D EDA+
Sbjct: 14 TSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMD 73
Query: 126 YISGTILDDRPIRV 139
+ G +LD R +RV
Sbjct: 74 AMDGAVLDGRELRV 87
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + + FS G I ++++ D+ ++ GF F F + E DA++ +
Sbjct: 65 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 124
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 125 NGESLDGRQIRVD 137
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 19 HCFISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTT 78
HC + +G + + Q ++Y++ PGTQ E + +TT++VGN+ T
Sbjct: 223 HCSSRPMRIGPAANKNTSGSQQFSKTSYQNP--PGTQNENDPN---NTTIFVGNLDSNVT 277
Query: 79 EEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIR 138
+E + ++FS+ GE+ + + K CGF F R E+A++ ++GT + + IR
Sbjct: 278 DEHLRQVFSQYGELVHVKIPAGKR----CGFV--QFSDRSCAEEALRILNGTPIGGQNIR 331
Query: 139 VDFDWGFQDGRQWGRGRSGGQVR 161
+ WGR S Q +
Sbjct: 332 LS----------WGRSPSNKQPQ 344
Score = 37.0 bits (84), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
T+++G++ ++ E I+ F+ GE+ + + +K + G+ F F +R E ++
Sbjct: 67 TLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQT 126
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
+GT + + +W S G+ R + DY
Sbjct: 127 YNGTAMPNGAQNFRLNWA-----------SAGEKRQDDSPDY 157
>gi|195145742|ref|XP_002013849.1| GL24357 [Drosophila persimilis]
gi|194102792|gb|EDW24835.1| GL24357 [Drosophila persimilis]
Length = 418
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|406867619|gb|EKD20657.1| RNA recognition motif containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S +V+VGN+ + TEEQI +FS AG++ + D+ + P GF F F + A
Sbjct: 5 PSKSVFVGNIPYGLTEEQIIRIFSTAGKVLNFRLVYDRETGRPKGFGFVEFPDSDSAASA 64
Query: 124 VKYISGTILDDRPIRVDF 141
V+ ++ + +R +RVDF
Sbjct: 65 VRNLNDHEIMNRKLRVDF 82
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + + FS G I ++++ D+ ++ GF F F + E DA++ +
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 68 NGESLDGRQIRVD 80
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG + F T E + E FS+ G I K+ + D+ ++ GF F F + ED +DA+ +
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAAM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKSVDGRMIRVD 79
>gi|125774537|ref|XP_001358527.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
gi|54638266|gb|EAL27668.1| GA20525 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
+V+VGN+ + TEE++ E+FS G + + + D+ S P GF F + +E A++
Sbjct: 17 SVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRN 76
Query: 127 ISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPD 171
++G + R +RVD + + + G QV + Y +P+
Sbjct: 77 LNGYEIGGRTLRVDNACTEKSRMEMQQLLQGPQVENPYGEPCEPE 121
>gi|345197228|ref|NP_001230808.1| transformer-2 protein homolog beta isoform 2 [Homo sapiens]
gi|410037850|ref|XP_003950298.1| PREDICTED: transformer-2 protein homolog beta [Pan troglodytes]
gi|426343201|ref|XP_004038203.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Gorilla
gorilla gorilla]
gi|441633316|ref|XP_004089753.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Nomascus
leucogenys]
gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens]
gi|119598610|gb|EAW78204.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598611|gb|EAW78205.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598614|gb|EAW78208.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|194375203|dbj|BAG62714.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 73 MSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTIL 132
+S YTTE + E+FS+ G I + + D+ S+ GF F F + +D ++A + +G L
Sbjct: 25 LSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMEL 84
Query: 133 DDRPIRVDF 141
D R IRVDF
Sbjct: 85 DGRRIRVDF 93
>gi|358378081|gb|EHK15764.1| hypothetical protein TRIVIDRAFT_38275 [Trichoderma virens Gv29-8]
Length = 300
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S V+VGN+ + +EEQI ++FS AG++++ + D + P GF FA + + A
Sbjct: 6 PSRVVFVGNIPYGLSEEQITDIFSSAGKVERFRLVYDSETGRPKGFGFADYPDTDSASSA 65
Query: 124 VKYISGTILDDRPIRVDFD----WGFQDGRQWGRGRSGG 158
V+ ++ + R +RVDF G DG+ G G
Sbjct: 66 VRNLNEYEIMGRKLRVDFSNEQKSGDDDGQNPGASNGGA 104
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F T E+ + + FS G I ++++ D+ ++ GF F F + E DA++ +
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 128 SGTILDDRPIRVD 140
+G LD R IRVD
Sbjct: 68 NGESLDGRQIRVD 80
>gi|116181910|ref|XP_001220804.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
gi|88185880|gb|EAQ93348.1| hypothetical protein CHGG_01583 [Chaetomium globosum CBS 148.51]
Length = 315
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 65 STTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAV 124
S V+VGN+ + TEEQI E+FS AG + + D+ + P GF FA F + AV
Sbjct: 7 SRVVFVGNIPYGLTEEQITEIFSGAGRVLNFRLVYDRETGRPKGFGFAEFPDYDSAASAV 66
Query: 125 KYISGTILDDRPIRVDF------DWGFQDGRQWGRGRSGG 158
+ ++ + R +RVDF D +D R G SGG
Sbjct: 67 RNLNDYEIMGRKLRVDFSNETVSDEDNRD-RDGAAGTSGG 105
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 67 TVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKY 126
TVYVGN+ TEE ++E+F +AG + + M D+ S G+ F + ED + A+K
Sbjct: 32 TVYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDADYAIKV 91
Query: 127 ISGTILDDRPIRVD 140
++ L +PIR +
Sbjct: 92 LNMIKLFGKPIRAN 105
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,443,000,445
Number of Sequences: 23463169
Number of extensions: 143287499
Number of successful extensions: 327224
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9071
Number of HSP's successfully gapped in prelim test: 5110
Number of HSP's that attempted gapping in prelim test: 309899
Number of HSP's gapped (non-prelim): 20559
length of query: 216
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 79
effective length of database: 9,144,741,214
effective search space: 722434555906
effective search space used: 722434555906
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 74 (33.1 bits)