BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037453
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XFD1|NCBP2_ARATH Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana
GN=CBP20 PE=1 SV=1
Length = 257
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 134/138 (97%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFK+Q KLSAYRDRRF GTQEEF+EAL ASTTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1 MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
KKIIMGLDKN+KTPCGFCF LFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61 KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>sp|Q84L14|NCBP2_ORYSJ Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp.
japonica GN=CBP20 PE=2 SV=1
Length = 243
Score = 260 bits (664), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 123/138 (89%), Positives = 129/138 (93%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
MASLFKD KLSAYRDRRF GTQEE+E AL AS TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1 MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
+KIIMGLDKNSKTPCGFCF L+YSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61 RKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120
Query: 153 RGRSGGQVRDEYRTDYDP 170
RGRSGGQVRDEYRTDYDP
Sbjct: 121 RGRSGGQVRDEYRTDYDP 138
>sp|B7P877|NCBP2_IXOSC Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis GN=Cbp20
PE=3 SV=1
Length = 152
Score = 188 bits (477), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 108/127 (85%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E L STT+YVGNMSFYTTEEQIYELFS+ G++KK+IMGLD+
Sbjct: 5 LSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRF 64
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 65 HKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFVEGRQFGRGKSGGQVRD 124
Query: 163 EYRTDYD 169
EYRTDYD
Sbjct: 125 EYRTDYD 131
>sp|P52298|NCBP2_HUMAN Nuclear cap-binding protein subunit 2 OS=Homo sapiens GN=NCBP2 PE=1
SV=1
Length = 156
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>sp|Q3ZBJ1|NCBP2_BOVIN Nuclear cap-binding protein subunit 2 OS=Bos taurus GN=NCBP2 PE=2
SV=1
Length = 156
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSQYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYRQDYDA 144
>sp|B1WC40|NCBP2_RAT Nuclear cap-binding protein subunit 2 OS=Rattus norvegicus GN=Ncbp2
PE=2 SV=1
Length = 156
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYREDYDA 144
>sp|Q9CQ49|NCBP2_MOUSE Nuclear cap-binding protein subunit 2 OS=Mus musculus GN=Ncbp2 PE=1
SV=1
Length = 156
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/129 (68%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD+ F G EE E+ L S T+YVGN+SFYTTEEQIYELFS++G+IKKIIMGLDK
Sbjct: 16 ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF +YSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76 MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135
Query: 162 DEYRTDYDP 170
DEYR DYD
Sbjct: 136 DEYREDYDA 144
>sp|Q7QCB6|NCBP2_ANOGA Nuclear cap-binding protein subunit 2 OS=Anopheles gambiae GN=Cbp20
PE=3 SV=3
Length = 163
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 110/139 (79%)
Query: 31 SAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
S + S+ LS YRD+ F G++ E E+ L S+T+YVGN+SFYTTEEQI+ELFSR G
Sbjct: 3 SQIQSVHTPSVSLSKYRDQHFKGSRHEQEKLLRVSSTLYVGNLSFYTTEEQIHELFSRCG 62
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
++++IIMGLDK KTPCGFCF +YSR D E A++YI+GT LDDR +RVD+D GF +GRQ
Sbjct: 63 DVRRIIMGLDKFKKTPCGFCFVEYYSRLDAESAMRYINGTRLDDRIVRVDWDAGFIEGRQ 122
Query: 151 WGRGRSGGQVRDEYRTDYD 169
+GRG++GGQVRDEYR D+D
Sbjct: 123 YGRGKTGGQVRDEYRQDHD 141
>sp|Q177H0|NCBP2_AEDAE Nuclear cap-binding protein subunit 2 OS=Aedes aegypti GN=Cbp20
PE=3 SV=1
Length = 159
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 109/137 (79%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M S+ LS YRD+ F G++ E E L ++T+Y+GN+SFYTTEEQI+ELFSR G+I
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRLTSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++I+MGLDK KTPCGFCF +Y+R+D E A++YI+GT LDDR +RVD+D GF +GRQ+G
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVEYYARDDAESAMRYINGTRLDDRIVRVDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG+SGGQVRDEYR D+D
Sbjct: 121 RGKSGGQVRDEYRQDHD 137
>sp|Q54KR9|NCBP2_DICDI Nuclear cap-binding protein subunit 2 OS=Dictyostelium discoideum
GN=ncbp2 PE=3 SV=1
Length = 234
Score = 181 bits (458), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 106/125 (84%)
Query: 46 YRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKT 105
Y D++ TQ+EF+ A+ S+T+YVG +SFYTTEEQ+YELFS+ GEIK+IIMGLD+N KT
Sbjct: 12 YYDKKSGFTQDEFKHAIDKSSTIYVGYLSFYTTEEQLYELFSKCGEIKRIIMGLDRNQKT 71
Query: 106 PCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYR 165
PCGFCF +YS+ED D +KYI+G+ LD+R IR D+D+GF++GRQ+GRG SGGQVRDEYR
Sbjct: 72 PCGFCFVEYYSKEDAADCIKYINGSKLDERLIRCDWDYGFKEGRQYGRGLSGGQVRDEYR 131
Query: 166 TDYDP 170
TDYDP
Sbjct: 132 TDYDP 136
>sp|C0H859|NCBP2_SALSA Nuclear cap-binding protein subunit 2 OS=Salmo salar GN=ncbp2 PE=2
SV=1
Length = 155
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 31 SAMASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRA 89
S + +LF D +S YRD+ F G + E E+ L + T+YVGN+SFYTTEEQ+YELFS++
Sbjct: 3 SKLNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFSKS 62
Query: 90 GEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGR 149
G++K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GR
Sbjct: 63 GDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKEGR 122
Query: 150 QWGRGRSGGQVRDEYRTDYDP 170
Q+GRG+SGGQVRDEYR DYDP
Sbjct: 123 QYGRGKSGGQVRDEYRQDYDP 143
>sp|B3LYP1|NCBP2_DROAN Nuclear cap-binding protein subunit 2 OS=Drosophila ananassae
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>sp|B4LZ88|NCB2B_DROVI Nuclear cap-binding protein subunit 2B OS=Drosophila virilis
GN=Cbp20-B PE=3 SV=1
Length = 154
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>sp|B4JUT1|NCBP2_DROGR Nuclear cap-binding protein subunit 2 OS=Drosophila grimshawi
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L STT+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSTTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>sp|B0W939|NCBP2_CULQU Nuclear cap-binding protein subunit 2 OS=Culex quinquefasciatus
GN=Cbp20 PE=3 SV=1
Length = 160
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 109/137 (79%)
Query: 33 MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI 92
M S+ LS YRD+ F G++ E E L S+T+Y+GN+SFYTTEEQI+ELFSR G+I
Sbjct: 1 MTSVHTPSVALSKYRDQHFKGSRHEQERLLRNSSTLYIGNLSFYTTEEQIHELFSRCGDI 60
Query: 93 KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 152
++I+MGLDK KTPCGFCF +Y+R D+E A++YI+GT LDDR +RVD+D GF +GRQ+G
Sbjct: 61 RRIVMGLDKFKKTPCGFCFVEYYARIDSEYAMRYINGTRLDDRIVRVDWDAGFVEGRQYG 120
Query: 153 RGRSGGQVRDEYRTDYD 169
RG++GGQVRDEYR D+D
Sbjct: 121 RGKTGGQVRDEYRQDHD 137
>sp|B5G279|NCBP2_TAEGU Nuclear cap-binding protein subunit 2 OS=Taeniopygia guttata
GN=NCBP2 PE=2 SV=1
Length = 168
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/148 (58%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Query: 22 ISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
+S LL LS + S ++S YRD+ F G+++ E++L S+T+YVGN+SFYTTEEQ
Sbjct: 1 MSGLLHTTLSGLNS--DSYCEISQYRDQHFRGSRQLQEKSLKISSTLYVGNLSFYTTEEQ 58
Query: 82 IYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
I ELFS+ G++K+I+MGLDK KTPCGFCF +Y+R D E A+++I+GT LDDR IR D+
Sbjct: 59 IQELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIIRTDW 118
Query: 142 DWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 119 DAGFKEGRQYGRGKTGGQVRDEYRTDYD 146
>sp|B4NB54|NCBP2_DROWI Nuclear cap-binding protein subunit 2 OS=Drosophila willistoni
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 178 bits (452), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 107/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLKESCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYTRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|C1BY64|NCBP2_ESOLU Nuclear cap-binding protein subunit 2 OS=Esox lucius GN=ncbp2 PE=2
SV=1
Length = 155
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 106/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ+YELFS++G++K+II+GLDK
Sbjct: 16 VSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVYELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>sp|Q1HE01|NCBP2_BOMMO Nuclear cap-binding protein subunit 2 OS=Bombyx mori PE=2 SV=1
Length = 154
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 107/125 (85%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
++S+YRD+ F G++ E E+ L AS+T+Y+GN+SFYTTEEQIYEL+SR G+I+++IMGLDK
Sbjct: 6 EISSYRDQHFKGSRSEQEKLLKASSTLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y+RED E+ ++YI+GT LDDR IR D+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYAREDAENCMRYINGTRLDDRIIRCDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRT 166
DEYRT
Sbjct: 126 DEYRT 130
>sp|B4KCD5|NCBP2_DROMO Nuclear cap-binding protein subunit 2 OS=Drosophila mojavensis
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 178 bits (451), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 107/128 (83%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS+YRD+ F G++ E E +L S+T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 7 LSSYRDQHFKGSRSEQERSLRDSSTLYVGNLSFYTTEEQIHELFSRCGDVRIIVMGLDKY 66
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KTPCGFCF +Y+R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVRD
Sbjct: 67 KKTPCGFCFVEYYTRAEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVRD 126
Query: 163 EYRTDYDP 170
EYRTDYD
Sbjct: 127 EYRTDYDA 134
>sp|B3P0D7|NCBP2_DROER Nuclear cap-binding protein subunit 2 OS=Drosophila erecta GN=Cbp20
PE=3 SV=1
Length = 154
Score = 177 bits (448), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRGSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRAEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|B4QV17|NCBP2_DROSI Nuclear cap-binding protein subunit 2 OS=Drosophila simulans
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|B4IBA4|NCBP2_DROSE Nuclear cap-binding protein subunit 2 OS=Drosophila sechellia
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|Q9V3L6|NCBP2_DROME Nuclear cap-binding protein subunit 2 OS=Drosophila melanogaster
GN=Cbp20 PE=1 SV=1
Length = 154
Score = 176 bits (447), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYVRSEAEAAMRFVNGTRLDDRLIRVDWDAGFVEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|Q293V6|NCBP2_DROPS Nuclear cap-binding protein subunit 2 OS=Drosophila pseudoobscura
pseudoobscura GN=Cbp20 PE=3 SV=1
Length = 154
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLKDSCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYIRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|B4GLK8|NCBP2_DROPE Nuclear cap-binding protein subunit 2 OS=Drosophila persimilis
GN=Cbp20 PE=3 SV=1
Length = 154
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLKDSCTLYVGNLSFYTTEEQIHELFSRCGDVRLIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYIRSEAESAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|Q8JGR6|NCBP2_DANRE Nuclear cap-binding protein subunit 2 OS=Danio rerio GN=ncbp2 PE=2
SV=2
Length = 155
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 33 MASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGE 91
+ +LF D +S YRD+ F G + E E+ L S T+YVGN+SFYTTEEQ++ELF++ G+
Sbjct: 5 LNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQSATLYVGNLSFYTTEEQVHELFAKCGD 64
Query: 92 IKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQW 151
+K+II+GLDK KT CGFCF +Y+R D E+A+++++GT LDDR IR D+D GF++GRQ+
Sbjct: 65 VKRIIIGLDKIKKTACGFCFVEYYTRADAENAMRFVNGTRLDDRIIRTDWDAGFKEGRQY 124
Query: 152 GRGRSGGQVRDEYRTDYDP 170
GRG+SGGQVRDEYR DYDP
Sbjct: 125 GRGKSGGQVRDEYRQDYDP 143
>sp|B4PL68|NCBP2_DROYA Nuclear cap-binding protein subunit 2 OS=Drosophila yakuba GN=Cbp20
PE=3 SV=1
Length = 154
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/129 (62%), Positives = 106/129 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ F G++ E E +L S T+YVGN+SFYTTEEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHFKGSRSEQERSLRDSCTLYVGNLSFYTTEEQIHELFSRCGDVRVIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYIRSEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYDP 170
DEYRTDYD
Sbjct: 126 DEYRTDYDA 134
>sp|Q5ZKR5|NCBP2_CHICK Nuclear cap-binding protein subunit 2 OS=Gallus gallus GN=NCBP2
PE=2 SV=1
Length = 168
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 115/148 (77%), Gaps = 2/148 (1%)
Query: 22 ISSLLLGELSAMASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQ 81
+S LL LS + S ++S YRD+ F G+++ E+ L S+T+YVGN+SFYTTEEQ
Sbjct: 1 MSGLLHTTLSGLNS--DSYCEISRYRDQHFRGSKKLQEKFLKISSTLYVGNLSFYTTEEQ 58
Query: 82 IYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDF 141
I ELFS+ G++K+I+MGLDK KTPCGFCF +Y+R D E A+++I+GT LDDR +R D+
Sbjct: 59 IQELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIVRTDW 118
Query: 142 DWGFQDGRQWGRGRSGGQVRDEYRTDYD 169
D GF++GRQ+GRG++GGQVRDEYRTDYD
Sbjct: 119 DAGFKEGRQYGRGKTGGQVRDEYRTDYD 146
>sp|P52299|NCBP2_XENLA Nuclear cap-binding protein subunit 2 OS=Xenopus laevis GN=ncbp2
PE=2 SV=2
Length = 153
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 103/128 (80%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
LS YRD+ F G + + E L S T+YVGN+SFYTTEEQI+ELFS++G++K+I+MGLDK
Sbjct: 14 LSQYRDQHFRGNRSDQESLLKQSCTLYVGNLSFYTTEEQIHELFSKSGDVKRIVMGLDKV 73
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R D E A+++I+GT LDDR +R D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 74 KKTACGFCFVEYYTRADAEQAMRFINGTRLDDRIVRTDWDAGFKEGRQYGRGKSGGQVRD 133
Query: 163 EYRTDYDP 170
EYR DYD
Sbjct: 134 EYRQDYDA 141
>sp|Q6DES0|NCBP2_XENTR Nuclear cap-binding protein subunit 2 OS=Xenopus tropicalis
GN=ncbp2 PE=2 SV=1
Length = 153
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/140 (60%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Query: 32 AMASLFKDQR-KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAG 90
A+ +L D +LS YRD+ F G + + E L S T+YVGN+SFYTTEEQI+ELFS++G
Sbjct: 2 ALGALKSDSYVELSQYRDQHFRGNRSDQECLLKHSCTLYVGNLSFYTTEEQIHELFSKSG 61
Query: 91 EIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQ 150
++KKI+MGLDK KT CGFCF +Y+R D E A+++I+GT LDDR IR D+D GF++GRQ
Sbjct: 62 DVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDAGFKEGRQ 121
Query: 151 WGRGRSGGQVRDEYRTDYDP 170
+GRG+SGGQVRDEYR DYD
Sbjct: 122 YGRGKSGGQVRDEYRQDYDA 141
>sp|Q93594|NCBP2_CAEEL Nuclear cap-binding protein subunit 2 OS=Caenorhabditis elegans
GN=ncbp-2 PE=3 SV=2
Length = 158
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 79/131 (60%), Positives = 106/131 (80%)
Query: 41 RKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLD 100
+++SAYRD+R+ GT + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IMGLD
Sbjct: 12 KEISAYRDQRYQGTVRDQETALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLD 71
Query: 101 KNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQV 160
+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ GGQV
Sbjct: 72 RFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFIEGRQYGRGKHGGQV 131
Query: 161 RDEYRTDYDPD 171
RDEYR DYDP+
Sbjct: 132 RDEYRKDYDPE 142
>sp|A2SW84|NCBP2_SINCH Nuclear cap-binding protein subunit 2 OS=Siniperca chuatsi GN=ncbp2
PE=2 SV=1
Length = 165
Score = 173 bits (439), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 105/128 (82%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S YRD+ F G + + E+ L S T+YVGN+SFYTTEEQ++ELFS++G++K+II+GLDK
Sbjct: 16 VSQYRDQHFKGNRYDQEKLLKQSHTLYVGNLSFYTTEEQVHELFSKSGDVKRIIIGLDKV 75
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
KT CGFCF +Y+R E+A+++I+GT LDDR IR D+D GF++GRQ+GRG+SGGQVRD
Sbjct: 76 KKTACGFCFVEYYTRAGAENAMRFINGTRLDDRIIRADWDAGFKEGRQYGRGKSGGQVRD 135
Query: 163 EYRTDYDP 170
EYR DYDP
Sbjct: 136 EYRQDYDP 143
>sp|B4M205|NCB2A_DROVI Nuclear cap-binding protein subunit 2-A OS=Drosophila virilis
GN=Cbp20-A PE=3 SV=1
Length = 154
Score = 173 bits (439), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 106/128 (82%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS+YRD+ + G++ E E +L S+T+YVGN+SFYT EEQI+ELFSR G+++ I+MGLDK
Sbjct: 6 ELSSYRDQHYKGSRFEQERSLRDSSTLYVGNLSFYTAEEQIHELFSRCGDVRMIVMGLDK 65
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KTPCGFCF +Y R + E A+++++GT LDDR IRVD+D GF +GRQ+GRG++GGQVR
Sbjct: 66 YKKTPCGFCFVEYYKRSEAEAAMRFVNGTRLDDRLIRVDWDAGFIEGRQYGRGKTGGQVR 125
Query: 162 DEYRTDYD 169
DEYRTDYD
Sbjct: 126 DEYRTDYD 133
>sp|A8Y1R8|NCBP2_CAEBR Nuclear cap-binding protein subunit 2 OS=Caenorhabditis briggsae
GN=ncbp-2 PE=3 SV=2
Length = 157
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
Query: 39 DQRK-LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIM 97
DQ K +SAYRD+R+ G+ + E AL S T+YVGN+S+YT E+Q+YELF RAG+++++IM
Sbjct: 9 DQPKDISAYRDQRYQGSVRDQELALRTSCTLYVGNLSYYTKEDQVYELFGRAGDVRRVIM 68
Query: 98 GLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSG 157
GLD+ KTPCGFCF +Y+RED E A++ IS T +DDR IR D+D GF +GRQ+GRG+ G
Sbjct: 69 GLDRFKKTPCGFCFVEYYTREDAELALQNISNTRMDDRVIRADWDAGFVEGRQYGRGKHG 128
Query: 158 GQVRDEYRTDYDPD 171
GQVRDEYR DYDP+
Sbjct: 129 GQVRDEYRKDYDPE 142
>sp|Q9P383|NCBP2_SCHPO Nuclear cap-binding protein subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cbc2 PE=3 SV=1
Length = 182
Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 95/128 (74%), Gaps = 1/128 (0%)
Query: 43 LSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKN 102
+S Y RRF + A+ S VYVGN+SFYTTEEQIY LFS+ GEI++IIMG+D+
Sbjct: 10 VSPYLIRRFKNDLRALD-AVKQSNCVYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRF 68
Query: 103 SKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 162
+KTPCGFCF ++ +D D++KYIS T LD+R IR D D G+++GRQ+GRG SGGQVRD
Sbjct: 69 TKTPCGFCFVEYFENQDALDSLKYISRTSLDERIIRADLDHGYEEGRQYGRGASGGQVRD 128
Query: 163 EYRTDYDP 170
E R ++DP
Sbjct: 129 EMREEFDP 136
>sp|Q08920|NCBP2_YEAST Nuclear cap-binding protein subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CBC2 PE=1 SV=1
Length = 208
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Query: 49 RRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCG 108
RR P +E E++ S+T+YVGN+SFYT+EEQIYELFS+ G IK+IIMGLD+ TPCG
Sbjct: 30 RRNPNGLQELRESM-KSSTIYVGNLSFYTSEEQIYELFSKCGTIKRIIMGLDRFKFTPCG 88
Query: 109 FCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDY 168
FCF ++ ++ +A+KY+S T LD++ I +D D GF+DGRQ+GRG+SGGQV DE R D+
Sbjct: 89 FCFIIYSCPDEALNALKYLSDTKLDEKTITIDLDPGFEDGRQFGRGKSGGQVSDELRFDF 148
Query: 169 D 169
D
Sbjct: 149 D 149
>sp|Q754W7|NCBP2_ASHGO Nuclear cap-binding protein subunit 2 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=CBC2 PE=3 SV=1
Length = 218
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 47 RDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTP 106
+ R+ PG EE +++ S T+YVGN+SFYT+EEQ+YELFS+ G I+KIIMGLD+ TP
Sbjct: 28 KARKTPGGLEELRKSM-TSATIYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTP 86
Query: 107 CGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRT 166
CGFCF ++ + ++ A+KY+S T LDDR I +D D GF++GRQ+GRG++GGQV DE R
Sbjct: 87 CGFCFIIYQTPQEALAALKYLSKTKLDDREITIDLDPGFEEGRQFGRGKNGGQVSDELRF 146
Query: 167 DYD 169
++D
Sbjct: 147 EFD 149
>sp|A6PVI3|NCB2L_HUMAN Nuclear cap-binding protein subunit 2-like OS=Homo sapiens
GN=NCBP2L PE=3 SV=1
Length = 153
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 42 KLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDK 101
+LS YRD +F G + + E+ L S+T+ +GN+SFYTTEE+I+ELFSR+ +I+ I MGLDK
Sbjct: 15 ELSCYRDHQFSGRKFQQEKLLKESSTLNMGNLSFYTTEEKIHELFSRS-DIRNIFMGLDK 73
Query: 102 NSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 161
KT CGFCF ++R D E+A+++++GT LD+ I D+D GF++G+Q+GRG+SGGQVR
Sbjct: 74 IKKTACGFCFVECHNRADAENAMRFLTGTCLDEWIICTDWDVGFREGQQYGRGKSGGQVR 133
Query: 162 DEYRTDY 168
DE+R D+
Sbjct: 134 DEFREDF 140
>sp|P27476|NSR1_YEAST Nuclear localization sequence-binding protein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1
SV=1
Length = 414
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%)
Query: 64 ASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDA 123
S T+++GN+SF + I+ELF++ GE+ + + ++ P GF + F + ED + A
Sbjct: 265 PSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 324
Query: 124 VKYISGTILDDRPIRVDF 141
+ + G +D+RP+R+DF
Sbjct: 325 LDALQGEYIDNRPVRLDF 342
>sp|Q28IQ9|CIRBP_XENTR Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp
PE=2 SV=1
Length = 166
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG ++F TTEE + ++FS+ G++ ++++ D+ SK GF F F + ED +DA+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKSVDGRQIRVD 80
>sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis GN=cirbp-b
PE=1 SV=1
Length = 166
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
+++G ++F T EE + ++FS+ G+I ++++ D+ +K GF F F + +D +DA+ +
Sbjct: 7 LFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 66
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 67 NGKAVDGRQIRVD 79
>sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2
SV=1
Length = 172
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1
SV=1
Length = 172
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp
PE=2 SV=1
Length = 172
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1
SV=1
Length = 172
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP
PE=2 SV=1
Length = 172
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + ++FS+ G+I ++++ D+ ++ GF F F + +D +DA+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 128 SGTILDDRPIRVDFDWGFQDGRQWG 152
+G +D R IRVD D R G
Sbjct: 68 NGKSVDGRQIRVDQAGKSSDNRSRG 92
>sp|Q9PTX2|CIRBP_LITCT Cold-inducible RNA-binding protein OS=Lithobates catesbeiana
GN=cirbp PE=2 SV=1
Length = 164
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 68 VYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYI 127
++VG +SF T E+ + +FS+ G+I+++++ D+ +K GF F F + ED +DA+ +
Sbjct: 8 LFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGM 67
Query: 128 SGTILDDRPIRVD 140
+G +D R IRVD
Sbjct: 68 NGKTVDGRQIRVD 80
>sp|O43040|CTF1_SCHPO Cleavage and termination factor 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ctf1 PE=1 SV=1
Length = 363
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 61 ALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFCFALFYSREDT 120
++ A V+VGN+ + +E+Q+ E+F++ G +K + LD + + G+ F F+ E T
Sbjct: 2 SMTAGNVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETT 61
Query: 121 EDAVKYISGTILDDRPIRVDF 141
AV+ ++ + L R IRV+F
Sbjct: 62 AMAVRKLNNSELGPRKIRVEF 82
>sp|Q80YT9|RBM11_MOUSE Splicing regulator RBM11 OS=Mus musculus GN=Rbm11 PE=1 SV=1
Length = 238
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 51 FPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEIKKIIMGLDKNSKTPCGFC 110
FP +E A TV+VGN+ EE +YELF +AG + K+ + D++ K P F
Sbjct: 2 FPAQEE-------ADRTVFVGNLEARVREEILYELFLQAGPLTKVTLCKDRDGK-PKSFG 53
Query: 111 FALFYSREDTEDAVKYISGTILDDRPIRVDFDWG 144
F F E A+ ++G L RPI V + +G
Sbjct: 54 FVCFKHPESVSYAIALLNGIRLYGRPINVQYRFG 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,986,494
Number of Sequences: 539616
Number of extensions: 3355081
Number of successful extensions: 8229
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 235
Number of HSP's that attempted gapping in prelim test: 7307
Number of HSP's gapped (non-prelim): 1059
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)