Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>037458
MNKMQSSGSDSSQDQQNQRQQQQQPPPPQQQPWMAMQYPAAAMVMPHQMMPPQHYPIPPP
PYMPYHQYQHHHQPHLQHQQQQQHQGSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIA
SIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRS
DNGPDLSIFVGDLAAD

High Scoring Gene Products

The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037458
        (196 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q9LEB3 - symbol:RBP47 "Polyadenylate-binding pr...   440  3.7e-46   2
TAIR|locus:2012211 - symbol:RBP47A "RNA-binding protein 4...   436  4.7e-44   2
TAIR|locus:2094098 - symbol:RBP47B "RNA-binding protein 4...   428  4.1e-43   2
TAIR|locus:2015403 - symbol:RBP47C "RNA-binding protein 4...   419  2.9e-39   1
TAIR|locus:2015398 - symbol:RBP47C' "RNA-binding protein ...   400  3.0e-37   1
TAIR|locus:2027372 - symbol:RBP45B species:3702 "Arabidop...   370  4.6e-34   1
TAIR|locus:2150215 - symbol:AT5G19350 species:3702 "Arabi...   365  1.5e-33   1
UNIPROTKB|Q9LEB4 - symbol:RBP45 "Polyadenylate-binding pr...   361  4.1e-33   1
TAIR|locus:2116322 - symbol:ATRBP45C species:3702 "Arabid...   346  1.6e-31   1
TAIR|locus:2160210 - symbol:RBP45A "RNA-binding protein 4...   343  3.3e-31   1
UNIPROTKB|E1BZH5 - symbol:TRNAU1AP "Uncharacterized prote...   236  7.2e-20   1
UNIPROTKB|Q1RMJ7 - symbol:TRNAU1AP "tRNA selenocysteine 1...   232  1.9e-19   1
UNIPROTKB|E2QV44 - symbol:TRNAU1AP "Uncharacterized prote...   232  1.9e-19   1
UNIPROTKB|Q9NX07 - symbol:TRNAU1AP "tRNA selenocysteine 1...   232  1.9e-19   1
UNIPROTKB|I3LHP4 - symbol:TRNAU1AP "Uncharacterized prote...   232  1.9e-19   1
MGI|MGI:1919037 - symbol:Trnau1ap "tRNA selenocysteine 1 ...   232  1.9e-19   1
RGD|619995 - symbol:Secp43 "tRNA selenocysteine associate...   232  1.9e-19   1
ASPGD|ASPL0000035772 - symbol:rrmA species:162425 "Emeric...   234  2.7e-19   1
UNIPROTKB|G4NFS0 - symbol:MGG_08741 "tRNA selenocysteine-...   224  4.5e-18   1
ZFIN|ZDB-GENE-040426-2386 - symbol:trnau1apl "tRNA seleno...   212  2.5e-17   1
POMBASE|SPAC17A2.09c - symbol:csx1 "RNA-binding protein C...   199  6.5e-15   1
POMBASE|SPBC23E6.01c - symbol:SPBC23E6.01c "mRNA processi...   181  3.3e-13   1
ZFIN|ZDB-GENE-050522-502 - symbol:trnau1ap "tRNA selenocy...   158  4.0e-11   1
WB|WBGene00015943 - symbol:tiar-1 species:6239 "Caenorhab...   151  4.5e-10   1
TAIR|locus:2087457 - symbol:AT3G14100 species:3702 "Arabi...   148  1.0e-09   1
FB|FBgn0031607 - symbol:CG15440 species:7227 "Drosophila ...   145  1.3e-09   1
TAIR|locus:2014340 - symbol:UBP1A "oligouridylate-binding...   147  1.3e-09   1
TAIR|locus:2018794 - symbol:UBP1B "oligouridylate binding...   145  2.1e-09   1
GENEDB_PFALCIPARUM|PFF1425w - symbol:PFF1425w "RNA bindin...   146  4.4e-09   1
UNIPROTKB|C6KTC9 - symbol:PFF1425w "RNA binding protein, ...   146  4.4e-09   1
ASPGD|ASPL0000061196 - symbol:AN10164 species:162425 "Eme...   140  9.3e-09   1
UNIPROTKB|Q83CD7 - symbol:CBU_1183 "Glycine-rich RNA-bind...   131  9.7e-09   1
UNIPROTKB|Q83D11 - symbol:CBU_0935 "RNA binding protein" ...   131  9.7e-09   1
TIGR_CMR|CBU_0935 - symbol:CBU_0935 "RNA-binding protein"...   131  9.7e-09   1
TIGR_CMR|CBU_1183 - symbol:CBU_1183 "nucleic acid binding...   131  9.7e-09   1
UNIPROTKB|E7EV40 - symbol:DAZL "Deleted in azoospermia-li...   127  2.6e-08   1
UNIPROTKB|G3V5Z6 - symbol:RBM23 "Probable RNA-binding pro...   124  5.3e-08   1
UNIPROTKB|Q4VY17 - symbol:PABPC1L "EPAB" species:9606 "Ho...   130  5.7e-08   1
UNIPROTKB|H0YJJ3 - symbol:RBM23 "Probable RNA-binding pro...   124  7.2e-08   1
UNIPROTKB|Q92904 - symbol:DAZL "Deleted in azoospermia-li...   127  9.4e-08   1
UNIPROTKB|F6S8J2 - symbol:DAZ4 "Deleted in azoospermia pr...   127  1.2e-07   1
RGD|1563142 - symbol:Pabpc1l "poly(A) binding protein, cy...   131  1.2e-07   1
UNIPROTKB|E7EUF4 - symbol:DAZ3 "Deleted in azoospermia pr...   127  1.3e-07   1
UNIPROTKB|E7EN82 - symbol:DAZ2 "Deleted in azoospermia pr...   127  1.4e-07   1
UNIPROTKB|E7EU98 - symbol:DAZ3 "Deleted in azoospermia pr...   127  1.4e-07   1
UNIPROTKB|E7ETR3 - symbol:DAZ3 "Deleted in azoospermia pr...   127  1.5e-07   1
UNIPROTKB|E7EU30 - symbol:DAZ4 "Deleted in azoospermia pr...   127  1.5e-07   1
UNIPROTKB|E7EU39 - symbol:DAZ2 "Deleted in azoospermia pr...   127  1.5e-07   1
UNIPROTKB|G3XAP0 - symbol:RBM23 "RNA binding motif protei...   124  1.6e-07   1
UNIPROTKB|I3LPX5 - symbol:LOC100625706 "Uncharacterized p...   125  1.6e-07   1
UNIPROTKB|E7ENA5 - symbol:DAZ4 "Deleted in azoospermia pr...   127  1.6e-07   1
UNIPROTKB|Q4VXU2 - symbol:PABPC1L "Polyadenylate-binding ...   130  1.6e-07   1
UNIPROTKB|E7ERQ6 - symbol:DAZ3 "Deleted in azoospermia pr...   127  1.7e-07   1
UNIPROTKB|E7EU33 - symbol:DAZ4 "Deleted in azoospermia pr...   127  1.7e-07   1
UNIPROTKB|D4A0P8 - symbol:Dazl "Protein Dazl" species:101...   124  1.8e-07   1
UNIPROTKB|A3DUJ0 - symbol:DAZL "Deleted in azoospermia-li...   124  2.0e-07   1
UNIPROTKB|J9NTC5 - symbol:DAZL "Uncharacterized protein" ...   124  2.0e-07   1
UNIPROTKB|E7ENA6 - symbol:DAZ2 "Deleted in azoospermia pr...   127  2.0e-07   1
MGI|MGI:1342328 - symbol:Dazl "deleted in azoospermia-lik...   124  2.1e-07   1
RGD|1591714 - symbol:Dazl "deleted in azoospermia-like" s...   124  2.1e-07   1
UNIPROTKB|Q96B58 - symbol:TIA1 "TIA1 cytotoxic granule-as...   120  2.2e-07   1
WB|WBGene00003902 - symbol:pab-1 species:6239 "Caenorhabd...   129  2.2e-07   1
FB|FBgn0005649 - symbol:Rox8 "Rox8" species:7227 "Drosoph...   127  2.3e-07   1
UNIPROTKB|I3L0B6 - symbol:DAZ2 "Deleted in azoospermia pr...   127  2.4e-07   1
UNIPROTKB|Q9NR90 - symbol:DAZ3 "Deleted in azoospermia pr...   127  2.4e-07   1
UNIPROTKB|Q13117 - symbol:DAZ2 "Deleted in azoospermia pr...   127  3.0e-07   1
UNIPROTKB|G4N7J4 - symbol:MGG_06400 "Nuclear and cytoplas...   126  3.0e-07   1
UNIPROTKB|Q86SG3 - symbol:DAZ4 "Deleted in azoospermia pr...   127  3.1e-07   1
UNIPROTKB|F5H3W3 - symbol:DAZ2 "Deleted in azoospermia pr...   127  3.3e-07   1
UNIPROTKB|Q1RMF9 - symbol:DAZ1 "DAZ1 protein" species:960...   127  3.4e-07   1
ZFIN|ZDB-GENE-030131-2167 - symbol:tia1l "cytotoxic granu...   123  3.6e-07   1
UNIPROTKB|E9PBY2 - symbol:DAZ2 "Deleted in azoospermia pr...   127  3.7e-07   1
UNIPROTKB|B1AM48 - symbol:ELAVL2 "ELAV-like protein 2" sp...   116  3.8e-07   1
UNIPROTKB|F1PL96 - symbol:DAZL "Uncharacterized protein" ...   124  3.9e-07   1
WB|WBGene00003903 - symbol:pab-2 species:6239 "Caenorhabd...   127  4.0e-07   1
UNIPROTKB|Q86U06 - symbol:RBM23 "Probable RNA-binding pro...   124  4.3e-07   1
UNIPROTKB|E1BNB4 - symbol:PABPC1L "Uncharacterized protei...   126  4.4e-07   1
UNIPROTKB|Q9NQZ3 - symbol:DAZ1 "Deleted in azoospermia pr...   127  4.4e-07   1
UNIPROTKB|E2RND1 - symbol:PABPC1L "Uncharacterized protei...   126  4.7e-07   1
UNIPROTKB|B1ANR1 - symbol:PABPC4 "Polyadenylate-binding p...   115  4.8e-07   1
UNIPROTKB|E5RH24 - symbol:PABPC1 "Polyadenylate-binding p...   115  4.8e-07   1
UNIPROTKB|E5RJB9 - symbol:PABPC1 "Polyadenylate-binding p...   115  4.8e-07   1
UNIPROTKB|E7ETC0 - symbol:TIAL1 "Nucleolysin TIAR" specie...   115  4.8e-07   1
UNIPROTKB|D4A7H4 - symbol:Tia1 "Protein Tia1" species:101...   120  5.0e-07   1
UNIPROTKB|C9JTN7 - symbol:TIA1 "Nucleolysin TIA-1 isoform...   120  5.2e-07   1
FB|FBgn0010258 - symbol:Rbp4 "RNA-binding protein 4" spec...   123  5.3e-07   1
GENEDB_PFALCIPARUM|PFL1170w - symbol:PFL1170w "polyadenyl...   127  5.4e-07   1
UNIPROTKB|Q8I5H4 - symbol:PFL1170w "Polyadenylate-binding...   127  5.4e-07   1
WB|WBGene00012904 - symbol:tiar-2 species:6239 "Caenorhab...   123  5.5e-07   1
UNIPROTKB|F1SDR6 - symbol:PABPC1L "Uncharacterized protei...   125  5.5e-07   1
ZFIN|ZDB-GENE-030131-1506 - symbol:tia1 "cytotoxic granul...   122  5.7e-07   1
WB|WBGene00000774 - symbol:cpf-2 species:6239 "Caenorhabd...   120  7.4e-07   1
WB|WBGene00001368 - symbol:exc-7 species:6239 "Caenorhabd...   122  7.6e-07   1
CGD|CAL0001768 - symbol:orf19.1876 species:5476 "Candida ...   106  8.7e-07   2
UNIPROTKB|Q800W4 - symbol:TIA1 "Uncharacterized protein" ...   120  8.9e-07   1
RGD|1305742 - symbol:Tia1 "TIA1 cytotoxic granule-associa...   120  9.0e-07   1
UNIPROTKB|D4A6U8 - symbol:Tia1 "Protein Tia1" species:101...   120  9.3e-07   1
UNIPROTKB|Q0VBZ6 - symbol:TIA1 "TIA1 cytotoxic granule-as...   120  9.4e-07   1
UNIPROTKB|F8W8I6 - symbol:TIA1 "Nucleolysin TIA-1 isoform...   120  9.4e-07   1
UNIPROTKB|P31483 - symbol:TIA1 "Nucleolysin TIA-1 isoform...   120  9.5e-07   1

WARNING:  Descriptions of 457 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|Q9LEB3 [details] [associations]
            symbol:RBP47 "Polyadenylate-binding protein RBP47"
            species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0034605
            "cellular response to heat" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0034605 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0010494 GO:GO:0008143 HSSP:P33240
            EMBL:AJ292768 ProteinModelPortal:Q9LEB3 Uniprot:Q9LEB3
        Length = 428

 Score = 440 (159.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
 Identities = 78/110 (70%), Positives = 91/110 (82%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             S   +NKTIW+GDL  WMDE+YLHSCF+  GE+ S+K+IRNKQTG SE YGFVEF THA 
Sbjct:    78 SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             AEKVLQSY   +MPNT+QPFRLNWA FSTG+KR++ G D SIFVGDLA+D
Sbjct:   138 AEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASD 187

 Score = 105 (42.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
 Identities = 30/98 (30%), Positives = 49/98 (50%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G   N TI+VG L   + +  L   F   GE+ S+K+   K      G GFV+F   ++A
Sbjct:   290 GDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGK------GCGFVQFSDRSSA 343

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDK--RSDNG 183
             ++ +Q  +  ++    Q  RL+W   S  +K  R+D+G
Sbjct:   344 QEAIQKLSGAIIGK--QAVRLSWGR-SPANKQMRTDSG 378

 Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 24/84 (28%), Positives = 40/84 (47%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             G + +I+VGDL   + +  L   FAS    +   KV+ +  TG S+GYGFV F   +   
Sbjct:   174 GSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERS 233

Query:   149 KVLQSYTSILMPNTDQPFRLNWAT 172
             + +     +    + +  R+  AT
Sbjct:   234 RAMTEMNGVYC--SSRAMRIGVAT 255

 Score = 61 (26.5 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
 Identities = 11/11 (100%), Positives = 11/11 (100%)

Query:    33 WMAMQYPAAAM 43
             WMAMQYPAAAM
Sbjct:    34 WMAMQYPAAAM 44


>TAIR|locus:2012211 [details] [associations]
            symbol:RBP47A "RNA-binding protein 47A" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005829 "cytosol"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0034605
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494
            EMBL:AC011807 eggNOG:COG0724 GO:GO:0008143 HSSP:Q14103
            IPI:IPI00529085 IPI:IPI01019950 PIR:F96532 RefSeq:NP_175383.1
            UniGene:At.23595 ProteinModelPortal:F4I3B3 SMR:F4I3B3 IntAct:F4I3B3
            PRIDE:F4I3B3 EnsemblPlants:AT1G49600.1 GeneID:841384
            KEGG:ath:AT1G49600 TAIR:At1g49600 OMA:KLLAIHQ Uniprot:F4I3B3
        Length = 445

 Score = 436 (158.5 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 78/112 (69%), Positives = 95/112 (84%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GSGG + KT+WVGDL HWMDE YLH+CF+ T E++S+KVIRNKQT  SEGYGFVEF + +
Sbjct:   112 GSGGDDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRS 171

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKR-SDNGPDLSIFVGDLAAD 196
              AE+ LQS++ + MPN +QPFRLNWA+FSTG+KR S+NGPDLSIFVGDLA D
Sbjct:   172 AAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPD 223

 Score = 102 (41.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
 Identities = 30/97 (30%), Positives = 48/97 (49%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G   N TI+VG L   + E  L   F+  GE+ S+K+       + +G GFV+F    +A
Sbjct:   322 GESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI------PVGKGCGFVQFANRQSA 375

Query:   148 EKVLQSYT-SILMPNTDQPFRLNWATFSTGDKRSDNG 183
             E+ + +   +++  NT    RL+W        RSD+G
Sbjct:   376 EEAIGNLNGTVIGKNT---VRLSWGRSPNKQWRSDSG 409

 Score = 82 (33.9 bits), Expect = 0.00041, Sum P(3) = 0.00041
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEF 141
             S  G + +I+VGDL   + +  L   FA     +   KV+ +  TG S+GYGFV F
Sbjct:   207 SENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRF 262

 Score = 45 (20.9 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
 Identities = 10/13 (76%), Positives = 10/13 (76%)

Query:    33 WMA--MQYPAAAM 43
             WMA   QYPAAAM
Sbjct:    48 WMAAMQQYPAAAM 60

 Score = 37 (18.1 bits), Expect = 0.00041, Sum P(3) = 0.00041
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query:   174 STGDKRSDNGPDLSIFVGDLAAD 196
             S  D  S+N    +IFVG L AD
Sbjct:   318 SMSDGESNNS---TIFVGGLDAD 337


>TAIR|locus:2094098 [details] [associations]
            symbol:RBP47B "RNA-binding protein 47B" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0042991 "transcription
            factor import into nucleus" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005829 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            EMBL:AP000419 GO:GO:0010494 eggNOG:COG0724 HSSP:P09651
            GO:GO:0008143 HOGENOM:HOG000186228 EMBL:AK226472 EMBL:BT026489
            EMBL:AY084821 IPI:IPI00522174 IPI:IPI00785888 RefSeq:NP_188544.1
            UniGene:At.8226 ProteinModelPortal:Q0WW84 SMR:Q0WW84 STRING:Q0WW84
            PaxDb:Q0WW84 PRIDE:Q0WW84 EnsemblPlants:AT3G19130.1 GeneID:821447
            KEGG:ath:AT3G19130 TAIR:At3g19130 InParanoid:Q0WW84 OMA:RAVENGP
            PhylomeDB:Q0WW84 ProtClustDB:CLSN2913615 Genevestigator:Q0WW84
            Uniprot:Q0WW84
        Length = 435

 Score = 428 (155.7 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 76/111 (68%), Positives = 96/111 (86%)

Query:    88 GGGEN-KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             G G++ KT+WVGDL HWMDE YLHSCF+ TGE++S+KVIRNK T  SEGYGFVEF + A 
Sbjct:   102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRS-DNGPDLSIFVGDLAAD 196
             AE+VLQ+Y+  +MPN+DQPFR+NWA+FSTG+KR+ +NGPDLS+FVGDL+ D
Sbjct:   162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPD 212

 Score = 95 (38.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
 Identities = 28/97 (28%), Positives = 47/97 (48%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G   N TI+VG +   + +  L   F+  GE+ S+K+       + +G GFV+F    +A
Sbjct:   316 GESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKI------PVGKGCGFVQFADRKSA 369

Query:   148 EKVLQSYT-SILMPNTDQPFRLNWATFSTGDKRSDNG 183
             E  ++S   +++  NT    RL+W        R D+G
Sbjct:   370 EDAIESLNGTVIGKNT---VRLSWGRSPNKQWRGDSG 403

 Score = 90 (36.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEF 141
             G + +++VGDL   + +  LH  F+     + S KV+ +  TG S+GYGFV F
Sbjct:   199 GPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRF 251

 Score = 44 (20.5 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
 Identities = 11/14 (78%), Positives = 12/14 (85%)

Query:    33 WMA-MQYP-AAAMV 44
             WMA MQYP AAAM+
Sbjct:    40 WMAAMQYPPAAAMM 53


>TAIR|locus:2015403 [details] [associations]
            symbol:RBP47C "RNA-binding protein 47C" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0008143 "poly(A) RNA binding"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0034605 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494 EMBL:AC007519
            eggNOG:COG0724 GO:GO:0008143 HSSP:Q14103 HOGENOM:HOG000186228
            UniGene:At.22563 ProtClustDB:CLSN2681931 EMBL:AF344325
            EMBL:AY035180 EMBL:AY062960 EMBL:BX813781 IPI:IPI00519360
            IPI:IPI00543304 PIR:B96515 RefSeq:NP_175180.1 RefSeq:NP_973984.1
            ProteinModelPortal:Q9SX79 SMR:Q9SX79 PRIDE:Q9SX79
            EnsemblPlants:AT1G47490.1 GeneID:841157 KEGG:ath:AT1G47490
            TAIR:At1g47490 InParanoid:Q9SX79 OMA:IWVGDLH PhylomeDB:Q9SX79
            Genevestigator:Q9SX79 Uniprot:Q9SX79
        Length = 432

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 80/110 (72%), Positives = 90/110 (81%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGE--IASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             GENKTIWVGDLHHWMDE YL+S FAS  E  I S+KVIRNK  GLSEGYGFVEF +H  A
Sbjct:    98 GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKR-SDNGPDLSIFVGDLAAD 196
             +KVL+ +    MPNTDQPFRLNWA+FSTG+KR  +NGPDLSIFVGDL+ D
Sbjct:   158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPD 207

 Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
 Identities = 21/53 (39%), Positives = 32/53 (60%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEF 141
             G + +I+VGDL   + +N LH  F+     + + KV+ +  TG S+GYGFV F
Sbjct:   194 GPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRF 246


>TAIR|locus:2015398 [details] [associations]
            symbol:RBP47C' "RNA-binding protein 47C'" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008143
            "poly(A) RNA binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0034605
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010494
            EMBL:AC007519 GO:GO:0008143 HSSP:Q14103 HOGENOM:HOG000186228
            EMBL:AK227406 EMBL:BT030029 IPI:IPI00530631 PIR:C96515
            RefSeq:NP_175181.1 UniGene:At.22563 UniGene:At.64064
            ProteinModelPortal:Q9SX80 SMR:Q9SX80 PRIDE:Q9SX80
            EnsemblPlants:AT1G47500.1 GeneID:841159 KEGG:ath:AT1G47500
            TAIR:At1g47500 InParanoid:Q9SX80 OMA:FANDIRP PhylomeDB:Q9SX80
            ProtClustDB:CLSN2681931 Genevestigator:Q9SX80 Uniprot:Q9SX80
        Length = 434

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 78/110 (70%), Positives = 87/110 (79%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGE--IASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             GENKTIWVGDL +WMDE YL+S F S  E  I S+KVIRNK  G SEGYGFVEF +H  A
Sbjct:   100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKR-SDNGPDLSIFVGDLAAD 196
             +KVLQ +    MPNTDQPFRLNWA+FSTG+KR  +NGPDLSIFVGDLA D
Sbjct:   160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPD 209


>TAIR|locus:2027372 [details] [associations]
            symbol:RBP45B species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0010193 "response to ozone" evidence=IEP] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0010193 EMBL:AC007296
            HSSP:P19339 eggNOG:COG0724 GO:GO:0008143 HOGENOM:HOG000186228
            EMBL:AY093201 EMBL:BT008494 EMBL:AK318868 EMBL:AY086969
            IPI:IPI00523017 IPI:IPI00536746 PIR:H86249 RefSeq:NP_172630.1
            RefSeq:NP_849641.1 UniGene:At.19842 ProteinModelPortal:Q9SAB3
            SMR:Q9SAB3 IntAct:Q9SAB3 PRIDE:Q9SAB3 EnsemblPlants:AT1G11650.2
            GeneID:837708 KEGG:ath:AT1G11650 TAIR:At1g11650 InParanoid:Q9SAB3
            OMA:PQAHYGQ PhylomeDB:Q9SAB3 ProtClustDB:CLSN2682179
            Genevestigator:Q9SAB3 Uniprot:Q9SAB3
        Length = 405

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 68/107 (63%), Positives = 87/107 (81%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             E +T+W+GDL +WMDEN+L+ CFA TGE+ S KVIRNKQTG  EGYGF+EF +HA AE+V
Sbjct:    60 EIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERV 119

Query:   151 LQSYTSILMPN-TDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             LQ++ +  +P+  DQ FRLNWA+ S+GDKR D+ PD +IFVGDLAAD
Sbjct:   120 LQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 165


>TAIR|locus:2150215 [details] [associations]
            symbol:AT5G19350 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0010048 "vernalization response" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0034605 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            EMBL:AF296837 GO:GO:0010494 GO:GO:0008143 HSSP:Q14103 EMBL:AY074319
            EMBL:AY114004 IPI:IPI00526390 IPI:IPI00846741 RefSeq:NP_001078604.1
            RefSeq:NP_197436.1 UniGene:At.31302 ProteinModelPortal:Q8VXZ9
            SMR:Q8VXZ9 PRIDE:Q8VXZ9 EnsemblPlants:AT5G19350.1 GeneID:832055
            KEGG:ath:AT5G19350 TAIR:At5g19350 HOGENOM:HOG000186228
            InParanoid:Q8VXZ9 OMA:NGTQMPG PhylomeDB:Q8VXZ9
            ProtClustDB:CLSN2693583 Genevestigator:Q8VXZ9 Uniprot:Q8VXZ9
        Length = 425

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 66/106 (62%), Positives = 81/106 (76%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             E +T+W+GDL +W+DENYL SCF+ TGE+ S+KVIRNK TG  EGYGF+EF +HA AE+ 
Sbjct:    22 EVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERT 81

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             LQ+Y    MP T+  FRLNWA+F +G K  D GPD SIFVGDLA D
Sbjct:    82 LQTYNGTQMPGTELTFRLNWASFGSGQK-VDAGPDHSIFVGDLAPD 126


>UNIPROTKB|Q9LEB4 [details] [associations]
            symbol:RBP45 "Polyadenylate-binding protein RBP45"
            species:4092 "Nicotiana plumbaginifolia" [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0008143 EMBL:AJ292767 HSSP:O08583
            ProteinModelPortal:Q9LEB4 Uniprot:Q9LEB4
        Length = 409

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 64/106 (60%), Positives = 83/106 (78%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             E +++W+GDL +WMDENYL +CF  TGE+ S KVIRNKQTG SEGYGF+EF +HA AE +
Sbjct:    82 EVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETI 141

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             LQ+Y   LMPN +Q FR+NWA+   G++R D+  + +IFVGDLAAD
Sbjct:   142 LQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLAAD 186

 Score = 115 (45.5 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 31/96 (32%), Positives = 47/96 (48%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G     N TI+VG L   + E +L   F+  GE+  +K++  K+ G      FV+F T A
Sbjct:   275 GESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCG------FVQFGTRA 328

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSD 181
             +AE+ L S     +    Q  RL+W   S   K++D
Sbjct:   329 SAEQALSSLNGTQLGG--QSIRLSWGR-SPSSKQTD 361


>TAIR|locus:2116322 [details] [associations]
            symbol:ATRBP45C species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005829
            GO:GO:0005634 EMBL:CP002687 EMBL:AL161566 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 EMBL:AL035440 HSSP:P19339
            GO:GO:0008143 OMA:YANRACA HOGENOM:HOG000186228 EMBL:AF370339
            EMBL:AY054487 EMBL:AY062999 EMBL:AY093292 IPI:IPI00516600
            PIR:T04823 RefSeq:NP_567764.1 UniGene:At.47594 UniGene:At.67098
            UniGene:At.67775 ProteinModelPortal:Q93W34 SMR:Q93W34 IntAct:Q93W34
            STRING:Q93W34 PRIDE:Q93W34 EnsemblPlants:AT4G27000.1 GeneID:828808
            KEGG:ath:AT4G27000 TAIR:At4g27000 ProtClustDB:CLSN2917618
            Genevestigator:Q93W34 Uniprot:Q93W34
        Length = 415

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 63/111 (56%), Positives = 80/111 (72%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G E +++W+GDL  WMDENYL + F  TGE  + KVIRNKQ G SEGYGF+EF  HA
Sbjct:    74 GSAG-EIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHA 132

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             TAE+ LQ+Y    MP+++Q FRLNWA    G++R   GP+ ++FVGDLA D
Sbjct:   133 TAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPD 183


>TAIR|locus:2160210 [details] [associations]
            symbol:RBP45A "RNA-binding protein 45A" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008143 "poly(A) RNA binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 eggNOG:COG0724 EMBL:AB005232 GO:GO:0008143
            HSSP:Q61474 HOGENOM:HOG000186228 EMBL:AF324983 EMBL:BT029545
            IPI:IPI00522054 RefSeq:NP_568815.1 UniGene:At.19141
            ProteinModelPortal:Q9FPJ8 SMR:Q9FPJ8 IntAct:Q9FPJ8 STRING:Q9FPJ8
            PRIDE:Q9FPJ8 EnsemblPlants:AT5G54900.1 GeneID:835581
            KEGG:ath:AT5G54900 TAIR:At5g54900 InParanoid:Q9FPJ8 OMA:EARTLWI
            PhylomeDB:Q9FPJ8 ProtClustDB:CLSN2917762 Genevestigator:Q9FPJ8
            Uniprot:Q9FPJ8
        Length = 387

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 63/105 (60%), Positives = 78/105 (74%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             K++W+GDL  WMDENY+ S FA +GE  S KVIRNK TG SEGYGF+EF +H+ AE+VLQ
Sbjct:    60 KSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQ 119

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKR-SDNGPDLSIFVGDLAAD 196
             +Y    MP+T+Q FRLNWA    G+KR    GPD +IFVGDLA +
Sbjct:   120 TYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPE 164

 Score = 95 (38.5 bits), Expect = 0.00049, P = 0.00049
 Identities = 35/120 (29%), Positives = 55/120 (45%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             G + TI+VGDL   + +  L   F +  G +   KV+ ++ TG S+GYGFV F       
Sbjct:   151 GPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQM 210

Query:   149 KVLQS----YTSI----LMPNTDQ---PFRLNWATFSTGDKRSDNGPD-LSIFVGDLAAD 196
             + +      Y S     + P  ++   P +      + G    DN P+  +IFVG L A+
Sbjct:   211 RAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDAN 270


>UNIPROTKB|E1BZH5 [details] [associations]
            symbol:TRNAU1AP "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0001514
            "selenocysteine incorporation" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0001514
            GeneTree:ENSGT00510000047100 OMA:EDPTPQL EMBL:AADN02043953
            IPI:IPI00576069 RefSeq:XP_417743.3 ProteinModelPortal:E1BZH5
            Ensembl:ENSGALT00000001994 GeneID:419597 KEGG:gga:419597 CTD:419597
            Uniprot:E1BZH5
        Length = 287

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 49/106 (46%), Positives = 69/106 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIA-SIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE+  S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFVSRAFATMGELVLSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL AD
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTAD 106


>UNIPROTKB|Q1RMJ7 [details] [associations]
            symbol:TRNAU1AP "tRNA selenocysteine 1-associated protein
            1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0001514 "selenocysteine
            incorporation" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 GO:GO:0001514
            GeneTree:ENSGT00510000047100 EMBL:BC114858 IPI:IPI00693783
            RefSeq:NP_001069435.1 UniGene:Bt.19750 ProteinModelPortal:Q1RMJ7
            SMR:Q1RMJ7 PRIDE:Q1RMJ7 Ensembl:ENSBTAT00000013718 GeneID:532582
            KEGG:bta:532582 CTD:54952 HOGENOM:HOG000234338 HOVERGEN:HBG056959
            InParanoid:Q1RMJ7 OMA:EDPTPQL OrthoDB:EOG44BB34 NextBio:20875741
            Uniprot:Q1RMJ7
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>UNIPROTKB|E2QV44 [details] [associations]
            symbol:TRNAU1AP "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001514 "selenocysteine incorporation" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0001514 GeneTree:ENSGT00510000047100 CTD:54952 OMA:EDPTPQL
            EMBL:AAEX03001701 RefSeq:XP_535338.2 Ensembl:ENSCAFT00000018643
            GeneID:478164 KEGG:cfa:478164 NextBio:20853531 Uniprot:E2QV44
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>UNIPROTKB|Q9NX07 [details] [associations]
            symbol:TRNAU1AP "tRNA selenocysteine 1-associated protein
            1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0001514 "selenocysteine
            incorporation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            EMBL:CH471059 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GO:GO:0001514 EMBL:AL513497 CTD:54952 HOGENOM:HOG000234338
            HOVERGEN:HBG056959 OMA:EDPTPQL OrthoDB:EOG44BB34 EMBL:AK000510
            EMBL:BC000680 EMBL:BC039879 IPI:IPI00016448 IPI:IPI00867673
            RefSeq:NP_060316.1 UniGene:Hs.533626 PDB:2DHG PDB:2DIV PDBsum:2DHG
            PDBsum:2DIV ProteinModelPortal:Q9NX07 SMR:Q9NX07 STRING:Q9NX07
            PhosphoSite:Q9NX07 DMDM:74761781 PRIDE:Q9NX07
            Ensembl:ENST00000373830 GeneID:54952 KEGG:hsa:54952 UCSC:uc001bqh.3
            GeneCards:GC01P028879 H-InvDB:HIX0000337 HGNC:HGNC:30813
            HPA:HPA032069 neXtProt:NX_Q9NX07 PharmGKB:PA164727240
            InParanoid:Q9NX07 PhylomeDB:Q9NX07 ChiTaRS:TRNAU1AP
            EvolutionaryTrace:Q9NX07 GenomeRNAi:54952 NextBio:58127 Bgee:Q9NX07
            CleanEx:HS_TRNAU1AP Genevestigator:Q9NX07 Uniprot:Q9NX07
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>UNIPROTKB|I3LHP4 [details] [associations]
            symbol:TRNAU1AP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0001514
            "selenocysteine incorporation" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0001514
            GeneTree:ENSGT00510000047100 OMA:EDPTPQL EMBL:FP565629
            RefSeq:XP_003356292.1 ProteinModelPortal:I3LHP4 SMR:I3LHP4
            PRIDE:I3LHP4 Ensembl:ENSSSCT00000028704 GeneID:100621644
            KEGG:ssc:100621644 Uniprot:I3LHP4
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>MGI|MGI:1919037 [details] [associations]
            symbol:Trnau1ap "tRNA selenocysteine 1 associated protein 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0001514 "selenocysteine incorporation"
            evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1919037 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HSSP:P11940 GO:GO:0001514
            GeneTree:ENSGT00510000047100 CTD:54952 HOGENOM:HOG000234338
            HOVERGEN:HBG056959 OMA:EDPTPQL OrthoDB:EOG44BB34 ChiTaRS:TRNAU1AP
            EMBL:AK152986 EMBL:CR752656 EMBL:BC005795 EMBL:BC048840
            EMBL:BC055454 EMBL:BC099594 IPI:IPI00556790 RefSeq:NP_082201.2
            UniGene:Mm.239183 ProteinModelPortal:Q80VC6 SMR:Q80VC6
            STRING:Q80VC6 PhosphoSite:Q80VC6 PRIDE:Q80VC6
            Ensembl:ENSMUST00000030730 GeneID:71787 KEGG:mmu:71787
            UCSC:uc008vbb.1 InParanoid:Q80VC6 NextBio:334520 Bgee:Q80VC6
            CleanEx:MM_TRSPAP1 Genevestigator:Q80VC6 Uniprot:Q80VC6
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>RGD|619995 [details] [associations]
            symbol:Secp43 "tRNA selenocysteine associated protein"
            species:10116 "Rattus norvegicus" [GO:0000049 "tRNA binding"
            evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0001514 "selenocysteine incorporation" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:619995 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0000049
            HSSP:P11940 GO:GO:0001514 HOVERGEN:HBG056959 EMBL:AF181856
            IPI:IPI00215043 RefSeq:NP_075416.1 UniGene:Rn.170540
            ProteinModelPortal:Q9QZI7 SMR:Q9QZI7 GeneID:65241 KEGG:rno:65241
            CTD:65241 NextBio:614199 Genevestigator:Q9QZI7 Uniprot:Q9QZI7
        Length = 287

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 48/106 (45%), Positives = 68/106 (64%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   FA+ GE + S+K+IRN+ TG+  GY FVEF   ATAEK L 
Sbjct:     4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63

Query:   153 SYTSILMPNTD--QPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P     + F+LN+AT+    K+ DN P+ S+FVGDL  D
Sbjct:    64 KINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPD 106


>ASPGD|ASPL0000035772 [details] [associations]
            symbol:rrmA species:162425 "Emericella nidulans"
            [GO:0006527 "arginine catabolic process" evidence=IMP] [GO:0003729
            "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 EMBL:BN001306
            GO:GO:0003676 eggNOG:COG0724 OrthoDB:EOG44BFB8 EMBL:AACD01000169
            HOGENOM:HOG000186228 OMA:PQAHYGQ RefSeq:XP_682359.1
            ProteinModelPortal:Q5ARJ0 STRING:Q5ARJ0
            EnsemblFungi:CADANIAT00009524 GeneID:2868083 KEGG:ani:AN9090.2
            Uniprot:Q5ARJ0
        Length = 393

 Score = 234 (87.4 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 51/112 (45%), Positives = 72/112 (64%)

Query:    89 GGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSE-GYGFVEFFTHAT 146
             G E KT +W+G+L  W+DEN++ + +   GE  ++K+IR+K +G S  GY FV+F + A 
Sbjct:    60 GNEGKTTLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVDFASPAA 119

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFS-TGDK-RSDNGPDLSIFVGDLAAD 196
             A K L S     MPNT++ F+LNWAT     D+ R D GP+ SIFVGDL  +
Sbjct:   120 AAKAL-SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPE 170

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 27/84 (32%), Positives = 42/84 (50%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             G   +I+VGDL   ++E  L S F S      S K++ +  +G+S GYGFV F      +
Sbjct:   157 GPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDENDQQ 216

Query:   149 KVLQSYTSILMPNTDQPFRLNWAT 172
             + L     +   N  +P R++ AT
Sbjct:   217 RALSEMQGVYCGN--RPMRISTAT 238


>UNIPROTKB|G4NFS0 [details] [associations]
            symbol:MGG_08741 "tRNA selenocysteine-associated protein 1"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CM001236 RefSeq:XP_003719244.1
            EnsemblFungi:MGG_08741T0 GeneID:2679034 KEGG:mgr:MGG_08741
            Uniprot:G4NFS0
        Length = 415

 Score = 224 (83.9 bits), Expect = 4.5e-18, P = 4.5e-18
 Identities = 46/111 (41%), Positives = 70/111 (63%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             G    KT+W+G+L  WMDEN++   +++  GE  ++KVIR++Q+G + GY FVEF +   
Sbjct:    42 GNDSAKTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSG-NAGYCFVEFPSSEA 100

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFS-TGDKRSDNGPDLSIFVGDLAAD 196
             A K L       +PN+ + F+LNWA+     D+R + GP+ SIFVGDL  +
Sbjct:   101 ATKAL-GLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPE 150

 Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
 Identities = 31/98 (31%), Positives = 47/98 (47%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCF-ASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             G   +I+VGDL   ++E  L S F A      S K++ +  TG S GYGFV F   +  +
Sbjct:   137 GPEYSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQ 196

Query:   149 KVLQSYTSILMPNTDQPFRLNWATFSTGDKRS--DNGP 184
             + L     +   N  +P R++ AT  T   +   + GP
Sbjct:   197 RALVEMQGVYCGN--RPMRISTATPKTRSHQQYGNQGP 232


>ZFIN|ZDB-GENE-040426-2386 [details] [associations]
            symbol:trnau1apl "tRNA selenocysteine 1 associated
            protein 1, like" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-2386 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            HOGENOM:HOG000234338 OrthoDB:EOG44BB34 EMBL:BC098884
            IPI:IPI00833586 UniGene:Dr.5347 ProteinModelPortal:Q4KM14
            SMR:Q4KM14 STRING:Q4KM14 PRIDE:Q4KM14 InParanoid:Q4KM14
            ArrayExpress:Q4KM14 Uniprot:Q4KM14
        Length = 316

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 42/106 (39%), Positives = 69/106 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIA-SIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+GDL  +MDEN++   F++ GE A  +K+I ++ TG S GY FVE    A+ ++ +Q
Sbjct:     7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66

Query:   153 SYTSILMPNTDQP--FRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                  L+P ++ P  F+LN+AT+    KR + GP+ S+FVGDL ++
Sbjct:    67 RLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSE 109


>POMBASE|SPAC17A2.09c [details] [associations]
            symbol:csx1 "RNA-binding protein Csx1" species:4896
            "Schizosaccharomyces pombe" [GO:0000932 "cytoplasmic mRNA
            processing body" evidence=ISO] [GO:0003729 "mRNA binding"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0070935 "3'-UTR-mediated mRNA
            stabilization" evidence=ISO] [GO:2000815 "regulation of mRNA
            stability involved in response to oxidative stress" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 PomBase:SPAC17A2.09c GO:GO:0005829 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0000932 eggNOG:COG0724 GO:GO:2000815
            EMBL:D83417 EMBL:D83418 PIR:T37810 RefSeq:NP_594243.1
            ProteinModelPortal:O13759 IntAct:O13759 MINT:MINT-4667695
            STRING:O13759 EnsemblFungi:SPAC17A2.09c.1 GeneID:2542151
            KEGG:spo:SPAC17A2.09c OrthoDB:EOG44BFB8 NextBio:20803223
            GO:GO:0070935 Uniprot:O13759
        Length = 632

 Score = 199 (75.1 bits), Expect = 6.5e-15, P = 6.5e-15
 Identities = 44/114 (38%), Positives = 66/114 (57%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSE---GYGFVEFF 142
             G G   + T+W+GDL  WMD  ++   +AS  E  ++KV+R+K +  SE    Y FV+F 
Sbjct:    78 GVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASS-SETLISYCFVQFS 136

Query:   143 THATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSD---NGPDLSIFVGDL 193
             + A AE+ L  Y + ++P     F+LNWAT   G + ++     P+ SIFVGDL
Sbjct:   137 SSAAAERALMKYNNTMIPGAHCTFKLNWAT-GGGIQHNNFVSRDPEFSIFVGDL 189


>POMBASE|SPBC23E6.01c [details] [associations]
            symbol:SPBC23E6.01c "mRNA processing factor
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000932
            "cytoplasmic mRNA processing body" evidence=ISO] [GO:0003729 "mRNA
            binding" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
            [GO:0071004 "U2-type prespliceosome" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 PomBase:SPBC23E6.01c GO:GO:0005829 GO:GO:0000166
            EMBL:CU329671 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000932
            eggNOG:COG0724 GO:GO:0071004 OrthoDB:EOG44BFB8 GO:GO:0070935
            HOGENOM:HOG000186228 RefSeq:NP_596601.2 ProteinModelPortal:O60176
            STRING:O60176 EnsemblFungi:SPBC23E6.01c.1 GeneID:2540551
            KEGG:spo:SPBC23E6.01c OMA:HEASSAM NextBio:20801677 Uniprot:O60176
        Length = 473

 Score = 181 (68.8 bits), Expect = 3.3e-13, P = 3.3e-13
 Identities = 40/114 (35%), Positives = 64/114 (56%)

Query:    86 GSGGGEN----KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEF 141
             GS   EN     T+W+G+L  W+ E ++   + + G+   +K+IRN+ TG++ GY FVEF
Sbjct:    82 GSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEF 141

Query:   142 FTHATAEKVLQSYTSILMPNTDQPFRLNWATFS-TGDKRSDNGPDLSIFVGDLA 194
              +   A   + S  +  +P T+  F+LNWA+     +K      + SIFVGDL+
Sbjct:   142 ASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLS 194

 Score = 96 (38.9 bits), Expect = 0.00051, P = 0.00051
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query:    94 TIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             +I+VGDL   ++E  ++S FAS      S K++ + QT +S GYGFV F      +  L 
Sbjct:   187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246

Query:   153 SYTSILMPNTDQPFRLNWAT 172
                  +    D+P R+  AT
Sbjct:   247 EMQGQICG--DRPIRVGLAT 264


>ZFIN|ZDB-GENE-050522-502 [details] [associations]
            symbol:trnau1ap "tRNA selenocysteine 1 associated
            protein 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050522-502 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006412 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            HSSP:P11940 GeneTree:ENSGT00510000047100 CTD:54952
            HOGENOM:HOG000234338 HOVERGEN:HBG056959 OrthoDB:EOG44BB34
            EMBL:BX530067 EMBL:BC095331 IPI:IPI00607273 RefSeq:NP_001018445.1
            UniGene:Dr.107924 ProteinModelPortal:Q503H1 SMR:Q503H1
            STRING:Q503H1 Ensembl:ENSDART00000052292 GeneID:553636
            KEGG:dre:553636 InParanoid:Q503H1 OMA:NVTEANE NextBio:20880371
            Bgee:Q503H1 Uniprot:Q503H1
        Length = 314

 Score = 158 (60.7 bits), Expect = 4.0e-11, P = 4.0e-11
 Identities = 35/104 (33%), Positives = 57/104 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++W+G+L  +MDE+++   FA  GE +  I++IR+K TG + GYGFVE       E+ L+
Sbjct:     3 SLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLR 62

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                   +P    P R   +  + G K+ ++    S+FV DL  D
Sbjct:    63 KVNGKPLPGATPPKRFKLSRSNYG-KQGESST-FSLFVSDLTPD 104


>WB|WBGene00015943 [details] [associations]
            symbol:tiar-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0009792
            GO:GO:0002009 GO:GO:0040007 GO:GO:0002119 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
            GO:GO:0003676 EMBL:FO080599 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            GeneID:173967 KEGG:cel:CELE_C18A3.5 UCSC:C18A3.5f.1 CTD:173967
            NextBio:881893 RefSeq:NP_495121.1 ProteinModelPortal:Q95QV8
            SMR:Q95QV8 IntAct:Q95QV8 STRING:Q95QV8 PRIDE:Q95QV8
            EnsemblMetazoa:C18A3.5a WormBase:C18A3.5a InParanoid:Q95QV8
            OMA:WAVEPGQ ArrayExpress:Q95QV8 Uniprot:Q95QV8
        Length = 408

 Score = 151 (58.2 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 36/113 (31%), Positives = 62/113 (54%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G+G  E +T++VG+L   + E+++ + F   G +   KVI +   G ++ Y FVEF  H 
Sbjct:    39 GNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHG 95

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRS--DNGPDLSIFVGDLAAD 196
              A + LQ+    L+   D+  ++NWA    G ++S  D      +FVGDL+++
Sbjct:    96 QASQALQTMNKRLL--LDREMKVNWAV-EPGQQQSKIDTTRHFHVFVGDLSSE 145

 Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 28/84 (33%), Positives = 43/84 (51%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +D   L   F   G+++  KVIR+  T  S+GYGFV +     AE+ ++  
Sbjct:   137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

Query:   155 TSILMPNTDQPFRLNWATFSTGDK 178
                 +    +  R NWAT   GD+
Sbjct:   197 NGQWLGR--RTIRTNWATRKPGDQ 218


>TAIR|locus:2087457 [details] [associations]
            symbol:AT3G14100 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005829 "cytosol" evidence=RCA] [GO:0006007
            "glucose catabolic process" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP000600 HSSP:P33240 KO:K13201 OMA:WAVEPGQ EMBL:AY139775
            EMBL:BT004540 IPI:IPI00517194 RefSeq:NP_188026.1 UniGene:At.22594
            UniGene:At.70203 ProteinModelPortal:Q9LJH8 SMR:Q9LJH8 IntAct:Q9LJH8
            STRING:Q9LJH8 PRIDE:Q9LJH8 EnsemblPlants:AT3G14100.1 GeneID:820626
            KEGG:ath:AT3G14100 TAIR:At3g14100 InParanoid:Q9LJH8
            PhylomeDB:Q9LJH8 ProtClustDB:CLSN2682164 Genevestigator:Q9LJH8
            Uniprot:Q9LJH8
        Length = 427

 Score = 148 (57.2 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 35/104 (33%), Positives = 58/104 (55%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++++VG++H  + E  L   F STG + S K+IR  ++     YGFV +F   +A   + 
Sbjct:    59 RSVYVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSS----YGFVHYFDRRSAALAIL 114

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             S     +    QP ++NWA ++TG +R D     +IFVGDL+ +
Sbjct:   115 SLNGRHL--FGQPIKVNWA-YATG-QREDTSSHFNIFVGDLSPE 154

 Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 27/92 (29%), Positives = 45/92 (48%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   + +  L+  F+     +  +V+ +++TG S G+GFV F     A+  +   
Sbjct:   146 IFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 205

Query:   155 TSILMPNTDQPFRLNWAT---FSTGDKRSDNG 183
                 +  + +  R NWAT    S  DK S +G
Sbjct:   206 NGKWL--SSRQIRCNWATKGATSGDDKLSSDG 235


>FB|FBgn0031607 [details] [associations]
            symbol:CG15440 species:7227 "Drosophila melanogaster"
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339
            eggNOG:COG0724 GeneTree:ENSGT00510000047100 EMBL:AY089645
            RefSeq:NP_608837.2 UniGene:Dm.4903 SMR:Q8SXG7 IntAct:Q8SXG7
            MINT:MINT-300703 STRING:Q8SXG7 EnsemblMetazoa:FBtr0077454
            GeneID:33652 KEGG:dme:Dmel_CG15440 UCSC:CG15440-RA
            FlyBase:FBgn0031607 InParanoid:Q8SXG7 OMA:EREFSVW OrthoDB:EOG4F7M1N
            ChiTaRS:CG15440 GenomeRNAi:33652 NextBio:784624 Uniprot:Q8SXG7
        Length = 336

 Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 36/105 (34%), Positives = 56/105 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEI-ASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +W+G L  +M EN++ + F   GE   +++++RNK TG   GY FV F +   A   +  
Sbjct:     8 LWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNFISDDHALDAMHK 67

Query:   154 YTSILMPNTDQ--PFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
                  +P T+    FRLN A  S   K   N  + S++VGDL++D
Sbjct:    68 LNGKPIPGTNPIVRFRLNSA--SNSYKLPGNEREFSVWVGDLSSD 110

 Score = 93 (37.8 bits), Expect = 0.00065, P = 0.00065
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query:    89 GGENK-TIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEF 141
             G E + ++WVGDL   +D+  L+  F+S    I + KVI +   G S+GYGFV F
Sbjct:    95 GNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTAKVILDS-LGFSKGYGFVRF 148


>TAIR|locus:2014340 [details] [associations]
            symbol:UBP1A "oligouridylate-binding protein 1A"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] [GO:0006007 "glucose catabolic process" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0005886 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 KO:K13201 IPI:IPI00516341
            RefSeq:NP_849806.1 UniGene:At.23098 ProteinModelPortal:F4HV67
            SMR:F4HV67 PRIDE:F4HV67 EnsemblPlants:AT1G54080.2 GeneID:841846
            KEGG:ath:AT1G54080 OMA:YEHRHAT PhylomeDB:F4HV67 Uniprot:F4HV67
        Length = 430

 Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 35/104 (33%), Positives = 57/104 (54%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++++ G++H  + E  L   FASTG I S K+IR  ++     YGFV +F    A   + 
Sbjct:    63 RSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKSS----YGFVHYFDRRCASMAIM 118

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +    QP ++NWA ++TG +R D     +IFVGDL+ +
Sbjct:   119 TLNGRHI--FGQPMKVNWA-YATG-QREDTSSHFNIFVGDLSPE 158


>TAIR|locus:2018794 [details] [associations]
            symbol:UBP1B "oligouridylate binding protein 1B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC007843 HSSP:P33240
            HOGENOM:HOG000206748 KO:K13201 OMA:NGSKQLR ProtClustDB:CLSN2682164
            EMBL:AY085705 EMBL:BT026477 IPI:IPI00543090 RefSeq:NP_564018.1
            UniGene:At.43816 ProteinModelPortal:Q9LQI9 SMR:Q9LQI9 STRING:Q9LQI9
            PRIDE:Q9LQI9 EnsemblPlants:AT1G17370.1 GeneID:838309
            KEGG:ath:AT1G17370 TAIR:At1g17370 InParanoid:Q9LQI9
            PhylomeDB:Q9LQI9 Genevestigator:Q9LQI9 Uniprot:Q9LQI9
        Length = 419

 Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 34/104 (32%), Positives = 59/104 (56%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             ++++VG++H  + E  L   FA TG + S K+IR +++     YGFV +F   +A   + 
Sbjct:    54 RSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSS----YGFVHYFDRRSAGLAIL 109

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             S     +    QP ++NWA +++G +R D     +IFVGDL+ +
Sbjct:   110 SLNGRHL--FGQPIKVNWA-YASG-QREDTSSHFNIFVGDLSPE 149

 Score = 106 (42.4 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 29/105 (27%), Positives = 53/105 (50%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   + +  L +CF+     +  +V+ +++TG S G+GFV F     A+  +   
Sbjct:   141 IFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEI 200

Query:   155 TSILMPNTDQPFRLNWAT--FSTG-DKRSDNGPDLSIFVGDLAAD 196
             T   + +  +  R NWAT   ++G DK+S +   +      ++ D
Sbjct:   201 TGKWLGS--RQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSED 243


>GENEDB_PFALCIPARUM|PFF1425w [details] [associations]
            symbol:PFF1425w "RNA binding protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AL844505 RefSeq:XP_966276.1
            ProteinModelPortal:C6KTC9 EnsemblProtists:PFF1425w:mRNA
            GeneID:3885734 KEGG:pfa:PFF1425w EuPathDB:PlasmoDB:PF3D7_0629400
            ProtClustDB:CLSZ2515346 Uniprot:C6KTC9
        Length = 780

 Score = 146 (56.5 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 34/106 (32%), Positives = 53/106 (50%)

Query:    93 KTIWVGDLH----HWMDENYLHSC--FASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             KT+WVGDL       +DENY+  C  +    +I  IK+ + K +     Y F+EF T+  
Sbjct:    23 KTLWVGDLEKIKDEVVDENYILYCMFYEFAEDIIRIKLCKEK-SNQKNSYAFIEFSTYEV 81

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGD 192
             A+   +      +P     F+LNWA ++  D  + N  DL+I + D
Sbjct:    82 AKYCFEKLNGKWIPGKAHRFKLNWAKYNMSDNITTNEKDLNIEIDD 127


>UNIPROTKB|C6KTC9 [details] [associations]
            symbol:PFF1425w "RNA binding protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AL844505 RefSeq:XP_966276.1
            ProteinModelPortal:C6KTC9 EnsemblProtists:PFF1425w:mRNA
            GeneID:3885734 KEGG:pfa:PFF1425w EuPathDB:PlasmoDB:PF3D7_0629400
            ProtClustDB:CLSZ2515346 Uniprot:C6KTC9
        Length = 780

 Score = 146 (56.5 bits), Expect = 4.4e-09, P = 4.4e-09
 Identities = 34/106 (32%), Positives = 53/106 (50%)

Query:    93 KTIWVGDLH----HWMDENYLHSC--FASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             KT+WVGDL       +DENY+  C  +    +I  IK+ + K +     Y F+EF T+  
Sbjct:    23 KTLWVGDLEKIKDEVVDENYILYCMFYEFAEDIIRIKLCKEK-SNQKNSYAFIEFSTYEV 81

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGD 192
             A+   +      +P     F+LNWA ++  D  + N  DL+I + D
Sbjct:    82 AKYCFEKLNGKWIPGKAHRFKLNWAKYNMSDNITTNEKDLNIEIDD 127


>ASPGD|ASPL0000061196 [details] [associations]
            symbol:AN10164 species:162425 "Emericella nidulans"
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:BN001308 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:C8VTL0 EnsemblFungi:CADANIAT00001543 OMA:QNTNPIP
            Uniprot:C8VTL0
        Length = 477

 Score = 140 (54.3 bits), Expect = 9.3e-09, P = 9.3e-09
 Identities = 35/104 (33%), Positives = 55/104 (52%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEG--YGFVEFFTHATAEKV 150
             + ++VG L   + E+ L   F +TG + S+K+I +K    S+G  YGFVEF     AE+ 
Sbjct:    90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFN-SKGANYGFVEFDDPGAAERA 148

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
             +Q+     +  ++   R+NWA  S    + D      IFVGDL+
Sbjct:   149 MQTLNGRRIHQSE--IRVNWAYQSNTANKEDTSNHFHIFVGDLS 190

 Score = 121 (47.7 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 28/77 (36%), Positives = 44/77 (57%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL + +++  L   F++ G ++  +V+ + +TG S GYGFV F   A AEK L S 
Sbjct:   184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSM 243

Query:   155 TSILMPNTDQPFRLNWA 171
                 + +  +  R NWA
Sbjct:   244 DGEWLGS--RAIRCNWA 258


>UNIPROTKB|Q83CD7 [details] [associations]
            symbol:CBU_1183 "Glycine-rich RNA-binding protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             +NK I+VG L + +  + L S F   GEI   K+I +++TG S+G+ F+ + T   A++ 
Sbjct:    17 QNK-IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEA 75

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
             +     I +    +  R+N A  +TGD+R D G
Sbjct:    76 VSKANGIDLQG--RKIRVNIARENTGDRRRDGG 106


>UNIPROTKB|Q83D11 [details] [associations]
            symbol:CBU_0935 "RNA binding protein" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
            RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
            KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
            ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
            Uniprot:Q83D11
        Length = 129

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query:    92 NKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 151
             N  I+VG+L + + EN LH  F+  G I S+K++RN +TG S+GY FV + T   A K L
Sbjct:    43 NDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKGYAFVTYVTPKQAVKAL 102

Query:   152 QSY 154
              ++
Sbjct:   103 DAH 105


>TIGR_CMR|CBU_0935 [details] [associations]
            symbol:CBU_0935 "RNA-binding protein" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR HSSP:Q9V535
            RefSeq:NP_819948.1 ProteinModelPortal:Q83D11 GeneID:1208828
            KEGG:cbu:CBU_0935 PATRIC:17930577 HOGENOM:HOG000026939 OMA:QVHSANI
            ProtClustDB:CLSK914425 BioCyc:CBUR227377:GJ7S-926-MONOMER
            Uniprot:Q83D11
        Length = 129

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 27/63 (42%), Positives = 40/63 (63%)

Query:    92 NKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 151
             N  I+VG+L + + EN LH  F+  G I S+K++RN +TG S+GY FV + T   A K L
Sbjct:    43 NDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGRSKGYAFVTYVTPKQAVKAL 102

Query:   152 QSY 154
              ++
Sbjct:   103 DAH 105


>TIGR_CMR|CBU_1183 [details] [associations]
            symbol:CBU_1183 "nucleic acid binding domain protein"
            species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AE016828
            GenomeReviews:AE016828_GR HOGENOM:HOG000276232 OMA:KRVHIPT
            RefSeq:NP_820178.2 ProteinModelPortal:Q83CD7 PRIDE:Q83CD7
            GeneID:1209086 KEGG:cbu:CBU_1183 PATRIC:17931107
            ProtClustDB:CLSK914597 BioCyc:CBUR227377:GJ7S-1169-MONOMER
            Uniprot:Q83CD7
        Length = 117

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 31/93 (33%), Positives = 52/93 (55%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             +NK I+VG L + +  + L S F   GEI   K+I +++TG S+G+ F+ + T   A++ 
Sbjct:    17 QNK-IYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEA 75

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
             +     I +    +  R+N A  +TGD+R D G
Sbjct:    76 VSKANGIDLQG--RKIRVNIARENTGDRRRDGG 106


>UNIPROTKB|E7EV40 [details] [associations]
            symbol:DAZL "Deleted in azoospermia-like" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC010139
            HGNC:HGNC:2685 IPI:IPI00927411 ProteinModelPortal:E7EV40 SMR:E7EV40
            Ensembl:ENST00000454457 ArrayExpress:E7EV40 Bgee:E7EV40
            Uniprot:E7EV40
        Length = 204

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 24/60 (40%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV FF     +K+++S
Sbjct:    79 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 137


>UNIPROTKB|G3V5Z6 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132780
            EMBL:AL135998 HGNC:HGNC:20155 ChiTaRS:RBM23
            ProteinModelPortal:G3V5Z6 SMR:G3V5Z6 Ensembl:ENST00000555209
            ArrayExpress:G3V5Z6 Bgee:G3V5Z6 Uniprot:G3V5Z6
        Length = 189

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 32/109 (29%), Positives = 52/109 (47%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G G    ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F     A
Sbjct:     8 GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 67

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              + L+      +    +P R+   T     +R D G D++   GD   D
Sbjct:    68 RRALEQLNGFELAG--RPMRVGHVT-----ERLDGGTDITFPDGDQELD 109


>UNIPROTKB|Q4VY17 [details] [associations]
            symbol:PABPC1L "EPAB" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:AL008725 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            HOVERGEN:HBG002295 TIGRFAMs:TIGR01628 HOGENOM:HOG000217922
            EMBL:AL109839 UniGene:Hs.641481 HGNC:HGNC:15797 EMBL:EU190483
            IPI:IPI00306870 SMR:Q4VY17 STRING:Q4VY17 Ensembl:ENST00000217074
            Ensembl:ENST00000537323 Uniprot:Q4VY17
        Length = 330

 Score = 130 (50.8 bits), Expect = 5.7e-08, P = 5.7e-08
 Identities = 36/108 (33%), Positives = 57/108 (52%)

Query:    87 SGGGEN-KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             SG G    +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A
Sbjct:     4 SGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPA 63

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
              AE+ L +    ++    QP R+ W+    G ++S  G   +IF+ +L
Sbjct:    64 DAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNL 106


>UNIPROTKB|H0YJJ3 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132780
            EMBL:AL135998 HGNC:HGNC:20155 ChiTaRS:RBM23 Ensembl:ENST00000553884
            Uniprot:H0YJJ3
        Length = 214

 Score = 124 (48.7 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 32/109 (29%), Positives = 52/109 (47%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G G    ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F     A
Sbjct:    33 GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 92

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              + L+      +    +P R+   T     +R D G D++   GD   D
Sbjct:    93 RRALEQLNGFELAG--RPMRVGHVT-----ERLDGGTDITFPDGDQELD 134


>UNIPROTKB|Q92904 [details] [associations]
            symbol:DAZL "Deleted in azoospermia-like" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008494 "translation activator activity"
            evidence=IDA] [GO:0045948 "positive regulation of translational
            initiation" evidence=IDA] [GO:0007281 "germ cell development"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 EMBL:CH471055 Gene3D:3.30.70.330
            GO:GO:0007283 GO:GO:0003723 GO:GO:0008494 GO:GO:0003730
            GO:GO:0007281 GO:GO:0005844 GO:GO:0045836 eggNOG:NOG260394
            GO:GO:0045948 OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573
            HOGENOM:HOG000246400 EMBL:U65918 EMBL:U66726 EMBL:U66078
            EMBL:U77476 EMBL:U77467 EMBL:U77468 EMBL:U77469 EMBL:U77470
            EMBL:U77471 EMBL:U77472 EMBL:U77473 EMBL:U77474 EMBL:U77475
            EMBL:AK303026 EMBL:BX648638 EMBL:AC010139 EMBL:BC027595
            IPI:IPI00871660 RefSeq:NP_001177740.1 RefSeq:NP_001342.2
            UniGene:Hs.131179 ProteinModelPortal:Q92904 SMR:Q92904
            IntAct:Q92904 STRING:Q92904 PhosphoSite:Q92904 DMDM:27805453
            PRIDE:Q92904 DNASU:1618 Ensembl:ENST00000250863
            Ensembl:ENST00000399444 GeneID:1618 KEGG:hsa:1618 UCSC:uc003cbb.3
            GeneCards:GC03M016603 HGNC:HGNC:2685 HPA:HPA019593 HPA:HPA019777
            MIM:601486 neXtProt:NX_Q92904 PharmGKB:PA27155 OMA:YVIPPAY
            GenomeRNAi:1618 NextBio:6646 ArrayExpress:Q92904 Bgee:Q92904
            CleanEx:HS_DAZL Genevestigator:Q92904 GermOnline:ENSG00000092345
            Uniprot:Q92904
        Length = 295

 Score = 127 (49.8 bits), Expect = 9.4e-08, P = 9.4e-08
 Identities = 24/60 (40%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV FF     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVES 99


>UNIPROTKB|F6S8J2 [details] [associations]
            symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
            HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
            IPI:IPI01018895 ProteinModelPortal:F6S8J2 SMR:F6S8J2
            Ensembl:ENST00000382290 UCSC:uc022cok.1 ArrayExpress:F6S8J2
            Bgee:F6S8J2 Uniprot:F6S8J2
        Length = 334

 Score = 127 (49.8 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>RGD|1563142 [details] [associations]
            symbol:Pabpc1l "poly(A) binding protein, cytoplasmic 1-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 RGD:1563142
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 OrthoDB:EOG4K6G3V
            GeneTree:ENSGT00640000091232 IPI:IPI00778604
            ProteinModelPortal:D3ZAS7 Ensembl:ENSRNOT00000055172
            UCSC:RGD:1563142 Uniprot:D3ZAS7
        Length = 607

 Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 34/100 (34%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    QP R+ W+    G +RS  G   +IF+ +L
Sbjct:    72 MNFEMIKG--QPIRIMWSHRDPGLRRSGMG---NIFIKNL 106

 Score = 105 (42.0 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L + +D   L+  F++ G I S KV+ N+  G S G+GFV F TH  A+K + + 
Sbjct:   101 IFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEH-G-SRGFGFVHFETHEAAQKAINTM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163

 Score = 98 (39.6 bits), Expect = 0.00043, P = 0.00043
 Identities = 22/57 (38%), Positives = 33/57 (57%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 151
             I+V +L   MDE  L   F+  G+  S+KV+R+   G S G+GF+ F  H  A+K +
Sbjct:   193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSN-GQSRGFGFINFEKHEEAQKAV 248


>UNIPROTKB|E7EUF4 [details] [associations]
            symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
            EMBL:AC010089 IPI:IPI00749494 ProteinModelPortal:E7EUF4 SMR:E7EUF4
            Ensembl:ENST00000306737 ArrayExpress:E7EUF4 Bgee:E7EUF4
            Uniprot:E7EUF4
        Length = 337

 Score = 127 (49.8 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7EN82 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00874259
            ProteinModelPortal:E7EN82 SMR:E7EN82 Ensembl:ENST00000382434
            ArrayExpress:E7EN82 Bgee:E7EN82 Uniprot:E7EN82
        Length = 361

 Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7EU98 [details] [associations]
            symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
            EMBL:AC010089 IPI:IPI00872285 ProteinModelPortal:E7EU98 SMR:E7EU98
            Ensembl:ENST00000400212 ArrayExpress:E7EU98 Bgee:E7EU98
            Uniprot:E7EU98
        Length = 361

 Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7ETR3 [details] [associations]
            symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
            EMBL:AC010089 IPI:IPI00872074 ProteinModelPortal:E7ETR3 SMR:E7ETR3
            Ensembl:ENST00000315357 ArrayExpress:E7ETR3 Bgee:E7ETR3
            Uniprot:E7ETR3
        Length = 366

 Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7EU30 [details] [associations]
            symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
            HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
            IPI:IPI00930462 ProteinModelPortal:E7EU30 SMR:E7EU30 PRIDE:E7EU30
            Ensembl:ENST00000382314 ArrayExpress:E7EU30 Bgee:E7EU30
            Uniprot:E7EU30
        Length = 366

 Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7EU39 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
            RefSeq:NP_001005786.2 UniGene:Hs.592257 GeneID:57055 KEGG:hsa:57055
            CTD:57055 HGNC:HGNC:15964 GenomeRNAi:57055 NextBio:62832
            HGNC:HGNC:15966 EMBL:AC006983 EMBL:AC007039 EMBL:AC053490
            EMBL:AC006982 EMBL:AC010089 IPI:IPI00974525 SMR:E7EU39
            Ensembl:ENST00000382294 Ensembl:ENST00000415508 UCSC:uc004fvo.3
            Uniprot:E7EU39
        Length = 366

 Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|G3XAP0 [details] [associations]
            symbol:RBM23 "RNA binding motif protein 23, isoform CRA_f"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL132780 EMBL:CH471078 EMBL:AL135998 UniGene:Hs.4997
            HGNC:HGNC:20155 ChiTaRS:RBM23 TIGRFAMs:TIGR01622
            ProteinModelPortal:G3XAP0 SMR:G3XAP0 Ensembl:ENST00000542016
            ArrayExpress:G3XAP0 Bgee:G3XAP0 Uniprot:G3XAP0
        Length = 269

 Score = 124 (48.7 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 32/109 (29%), Positives = 52/109 (47%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G G    ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F     A
Sbjct:    88 GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 147

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              + L+      +    +P R+   T     +R D G D++   GD   D
Sbjct:   148 RRALEQLNGFELAG--RPMRVGHVT-----ERLDGGTDITFPDGDQELD 189


>UNIPROTKB|I3LPX5 [details] [associations]
            symbol:LOC100625706 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0045836 "positive regulation of
            meiosis" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
            [GO:0005844 "polysome" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YVIPPAY
            EMBL:FP312724 Ensembl:ENSSSCT00000022390 Uniprot:I3LPX5
        Length = 298

 Score = 125 (49.1 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 24/60 (40%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             TI+VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TIFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>UNIPROTKB|E7ENA5 [details] [associations]
            symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
            HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
            IPI:IPI00936003 SMR:E7ENA5 Ensembl:ENST00000382432
            Ensembl:ENST00000400494 UCSC:uc022coz.1 Uniprot:E7ENA5
        Length = 382

 Score = 127 (49.8 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|Q4VXU2 [details] [associations]
            symbol:PABPC1L "Polyadenylate-binding protein 1-like"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 EMBL:AL008725
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 CTD:80336 HOGENOM:HOG000217922 OrthoDB:EOG4K6G3V
            HSSP:P11940 EMBL:AL109839 IPI:IPI00556259 RefSeq:NP_001118228.1
            UniGene:Hs.641481 ProteinModelPortal:Q4VXU2 SMR:Q4VXU2
            IntAct:Q4VXU2 STRING:Q4VXU2 PhosphoSite:Q4VXU2 DMDM:74754038
            PaxDb:Q4VXU2 PRIDE:Q4VXU2 Ensembl:ENST00000217073
            Ensembl:ENST00000255136 GeneID:80336 KEGG:hsa:80336 UCSC:uc010ggv.1
            GeneCards:GC20P043538 HGNC:HGNC:15797 neXtProt:NX_Q4VXU2
            PharmGKB:PA162398552 InParanoid:Q4VXU2 OMA:MNFEMLK ChiTaRS:PABPC1L
            GenomeRNAi:80336 NextBio:70904 ArrayExpress:Q4VXU2 Bgee:Q4VXU2
            CleanEx:HS_PABPC1L Genevestigator:Q4VXU2 Uniprot:Q4VXU2
        Length = 614

 Score = 130 (50.8 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 36/108 (33%), Positives = 57/108 (52%)

Query:    87 SGGGEN-KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             SG G    +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A
Sbjct:     4 SGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPA 63

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
              AE+ L +    ++    QP R+ W+    G ++S  G   +IF+ +L
Sbjct:    64 DAERALDTMNFEMLKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNL 106


>UNIPROTKB|E7ERQ6 [details] [associations]
            symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15965
            EMBL:AC010089 IPI:IPI00942002 ProteinModelPortal:E7ERQ6 SMR:E7ERQ6
            Ensembl:ENST00000446723 ArrayExpress:E7ERQ6 Bgee:E7ERQ6
            Uniprot:E7ERQ6
        Length = 390

 Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E7EU33 [details] [associations]
            symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006338
            HGNC:HGNC:15966 ChiTaRS:DAZ4 EMBL:AC006982 EMBL:AC010089
            IPI:IPI00639994 SMR:E7EU33 Ensembl:ENST00000382296
            Ensembl:ENST00000382305 Uniprot:E7EU33
        Length = 390

 Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|D4A0P8 [details] [associations]
            symbol:Dazl "Protein Dazl" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IEA] [GO:0008494
            "translation activator activity" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0045836 "positive
            regulation of meiosis" evidence=IEA] [GO:0045948 "positive
            regulation of translational initiation" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1591714 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00530000063480 CTD:1618 EMBL:CH473987
            IPI:IPI00870381 RefSeq:NP_001102884.1 UniGene:Rn.136288
            Ensembl:ENSRNOT00000066517 GeneID:680486 KEGG:rno:680486
            NextBio:718813 Uniprot:D4A0P8
        Length = 281

 Score = 124 (48.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>UNIPROTKB|A3DUJ0 [details] [associations]
            symbol:DAZL "Deleted in azoospermia-like transcript variant
            1" species:9913 "Bos taurus" [GO:0045948 "positive regulation of
            translational initiation" evidence=IEA] [GO:0045836 "positive
            regulation of meiosis" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=IEA] [GO:0007281 "germ cell development" evidence=IEA]
            [GO:0005844 "polysome" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
            eggNOG:NOG260394 GO:GO:0045948 GeneTree:ENSGT00530000063480
            OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 HOGENOM:HOG000246400
            OMA:YVIPPAY EMBL:DAAA02003725 EMBL:DQ408764 EMBL:DQ408765
            EMBL:EF501823 IPI:IPI00706010 RefSeq:NP_001075194.1
            UniGene:Bt.63695 STRING:A3DUJ0 Ensembl:ENSBTAT00000048665
            GeneID:530116 KEGG:bta:530116 InParanoid:A3DUJ0 NextBio:20875183
            Uniprot:A3DUJ0
        Length = 295

 Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>UNIPROTKB|J9NTC5 [details] [associations]
            symbol:DAZL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00530000063480 CTD:1618 OMA:YVIPPAY EMBL:AAEX03013583
            RefSeq:XP_534251.3 Ensembl:ENSCAFT00000046462 GeneID:477055
            KEGG:cfa:477055 Uniprot:J9NTC5
        Length = 295

 Score = 124 (48.7 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>UNIPROTKB|E7ENA6 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00942959
            ProteinModelPortal:E7ENA6 SMR:E7ENA6 Ensembl:ENST00000400493
            ArrayExpress:E7ENA6 Bgee:E7ENA6 Uniprot:E7ENA6
        Length = 438

 Score = 127 (49.8 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>MGI|MGI:1342328 [details] [associations]
            symbol:Dazl "deleted in azoospermia-like" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IMP] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=ISO;IDA] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0042802 "identical protein binding" evidence=IPI]
            [GO:0044464 "cell part" evidence=IDA] [GO:0045836 "positive
            regulation of meiosis" evidence=IMP] [GO:0045948 "positive
            regulation of translational initiation" evidence=ISO;IDA]
            [GO:0048477 "oogenesis" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:1342328 GO:GO:0007275 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283 GO:GO:0008494
            GO:GO:0003730 GO:GO:0007281 GO:GO:0005844 GO:GO:0045836
            eggNOG:NOG260394 GO:GO:0045948 GeneTree:ENSGT00530000063480
            OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 HOGENOM:HOG000246400
            OMA:YVIPPAY EMBL:X95724 EMBL:U38690 EMBL:U46694 EMBL:AK014854
            EMBL:AK033183 IPI:IPI00262067 RefSeq:NP_034151.3 UniGene:Mm.280641
            PDB:2XS2 PDB:2XS5 PDB:2XS7 PDB:2XSF PDBsum:2XS2 PDBsum:2XS5
            PDBsum:2XS7 PDBsum:2XSF ProteinModelPortal:Q64368 SMR:Q64368
            IntAct:Q64368 MINT:MINT-133503 STRING:Q64368 PhosphoSite:Q64368
            PaxDb:Q64368 PRIDE:Q64368 Ensembl:ENSMUST00000010736 GeneID:13164
            KEGG:mmu:13164 UCSC:uc008cyv.2 InParanoid:Q64368
            EvolutionaryTrace:Q64368 NextBio:283242 Bgee:Q64368 CleanEx:MM_DAZL
            Genevestigator:Q64368 GermOnline:ENSMUSG00000010592 Uniprot:Q64368
        Length = 298

 Score = 124 (48.7 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>RGD|1591714 [details] [associations]
            symbol:Dazl "deleted in azoospermia-like" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0005844 "polysome"
            evidence=IEA;ISO] [GO:0007281 "germ cell development"
            evidence=IEA;ISO] [GO:0008494 "translation activator activity"
            evidence=IEA;ISO] [GO:0042802 "identical protein binding"
            evidence=IEA;ISO] [GO:0044464 "cell part" evidence=ISO] [GO:0045836
            "positive regulation of meiosis" evidence=IEA;ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1591714 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0008494 GO:GO:0003730 GO:GO:0007281
            GO:GO:0005844 GO:GO:0045836 GO:GO:0045948 OrthoDB:EOG4T783S
            EMBL:CH473987 UniGene:Rn.136288 IPI:IPI00765442
            Ensembl:ENSRNOT00000039512 UCSC:RGD:1591714 Uniprot:D4A3C6
        Length = 298

 Score = 124 (48.7 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    41 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 99


>UNIPROTKB|Q96B58 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein, isoform CRA_d" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CH471053
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
            HSSP:P11940 EMBL:AC016700 UniGene:Hs.413123 HGNC:HGNC:11802
            ChiTaRS:TIA1 EMBL:BC015944 IPI:IPI00743479 SMR:Q96B58 STRING:Q96B58
            Ensembl:ENST00000416149 UCSC:uc002sgm.3 Uniprot:Q96B58
        Length = 214

 Score = 120 (47.3 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>WB|WBGene00003902 [details] [associations]
            symbol:pab-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0040010 "positive regulation of growth
            rate" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
            evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0007276 "gamete generation" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0043186
            "P granule" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
            body" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0010171
            GO:GO:0040035 GO:GO:0000932 GO:GO:0007276 GO:GO:0043186 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            EMBL:AL032631 HSSP:P11940 GeneTree:ENSGT00640000091232
            GeneID:172920 KEGG:cel:CELE_Y106G6H.2 UCSC:Y106G6H.2b CTD:172920
            NextBio:877531 PIR:T26427 RefSeq:NP_001021709.1
            ProteinModelPortal:Q9U302 SMR:Q9U302 DIP:DIP-26308N IntAct:Q9U302
            MINT:MINT-226577 STRING:Q9U302 PRIDE:Q9U302
            EnsemblMetazoa:Y106G6H.2a.1 EnsemblMetazoa:Y106G6H.2a.2
            EnsemblMetazoa:Y106G6H.2a.3 EnsemblMetazoa:Y106G6H.2a.4
            EnsemblMetazoa:Y106G6H.2a.5 EnsemblMetazoa:Y106G6H.2a.6
            WormBase:Y106G6H.2a InParanoid:Q9U302 OMA:CKVAMDE
            ArrayExpress:Q9U302 Uniprot:Q9U302
        Length = 646

 Score = 129 (50.5 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 32/100 (32%), Positives = 55/100 (55%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  ++E+ L   F++ G + SI+V R+  T LS GY +V F   A AE+ + +
Sbjct:    33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                  +    +P R+ W+      +RS  G   +IF+ +L
Sbjct:    93 MNFEALHG--KPMRIMWSQRDPAMRRSGAG---NIFIKNL 127

 Score = 96 (38.9 bits), Expect = 0.00077, P = 0.00076
 Identities = 24/73 (32%), Positives = 38/73 (52%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             SG G    I++ +L   +D   ++  F+  G I S KV  ++  G S+GYGFV F T   
Sbjct:   117 SGAGN---IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEA 172

Query:   147 AEKVLQSYTSILM 159
             A+  +Q    +L+
Sbjct:   173 AQNAIQKVNGMLL 185


>FB|FBgn0005649 [details] [associations]
            symbol:Rox8 "Rox8" species:7227 "Drosophila melanogaster"
            [GO:0008143 "poly(A) RNA binding" evidence=NAS] [GO:0003729 "mRNA
            binding" evidence=ISS;NAS] [GO:0005685 "U1 snRNP" evidence=ISS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000398
            GO:GO:0000381 HSSP:P11940 GO:GO:0005685
            GeneTree:ENSGT00680000099967 KO:K13201 OMA:EEVYNQS
            FlyBase:FBgn0005649 EMBL:BT050464 RefSeq:NP_732945.1
            UniGene:Dm.6352 SMR:Q8IMX4 IntAct:Q8IMX4 MINT:MINT-303158
            STRING:Q8IMX4 EnsemblMetazoa:FBtr0084591 EnsemblMetazoa:FBtr0333200
            EnsemblMetazoa:FBtr0333201 EnsemblMetazoa:FBtr0333202 GeneID:42848
            KEGG:dme:Dmel_CG5422 UCSC:CG5422-RD CTD:42848 InParanoid:Q8IMX4
            GenomeRNAi:42848 NextBio:830893 Uniprot:Q8IMX4
        Length = 470

 Score = 127 (49.8 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 31/104 (29%), Positives = 56/104 (53%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E+ L + F++ G + S K+IR  + G ++ Y F+E+  +  A   L 
Sbjct:     7 KTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIR--EPG-NDPYAFIEYSNYQAATTALT 63

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +    L    ++  ++NWAT      ++D      IFVGDL+ +
Sbjct:    64 AMNKRLF--LEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPE 105

 Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 27/78 (34%), Positives = 43/78 (55%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   ++   L   FA  GEI++ +++R+  T  S+GY FV F   A AE  +Q+ 
Sbjct:    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAM 156

Query:   155 TSILMPNTDQPFRLNWAT 172
                 + +  +  R NW+T
Sbjct:   157 NGQWIGS--RSIRTNWST 172


>UNIPROTKB|I3L0B6 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 ProteinModelPortal:I3L0B6
            SMR:I3L0B6 Ensembl:ENST00000382431 Bgee:I3L0B6 Uniprot:I3L0B6
        Length = 486

 Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|Q9NR90 [details] [associations]
            symbol:DAZ3 "Deleted in azoospermia protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007283 GO:GO:0003723 EMBL:AC006338 UniGene:Hs.70936
            MIM:415000 Orphanet:1646 eggNOG:KOG0118 HOVERGEN:HBG048860
            UniGene:Hs.592257 HOGENOM:HOG000112149 GermOnline:ENSG00000205944
            EMBL:AF248481 EMBL:BC113005 IPI:IPI00006501 IPI:IPI00742060
            RefSeq:NP_065097.2 ProteinModelPortal:Q9NR90 SMR:Q9NR90
            STRING:Q9NR90 PhosphoSite:Q9NR90 DMDM:44887842 PRIDE:Q9NR90
            Ensembl:ENST00000382365 GeneID:57054 KEGG:hsa:57054 UCSC:uc004fvs.3
            UCSC:uc004fvw.3 CTD:57054 GeneCards:GC0YM026909 H-InvDB:HIX0093747
            HGNC:HGNC:15965 MIM:400027 neXtProt:NX_Q9NR90 PharmGKB:PA27151
            OrthoDB:EOG4T783S GenomeRNAi:57054 NextBio:62828
            ArrayExpress:Q9NR90 Bgee:Q9NR90 Genevestigator:Q9NR90
            Uniprot:Q9NR90
        Length = 486

 Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|Q13117 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007338 "single fertilization" evidence=TAS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
            GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 GO:GO:0007338 EMBL:AC006338 MIM:415000 Orphanet:1646
            eggNOG:KOG0118 HOVERGEN:HBG048860 EMBL:U21663 EMBL:AF248480
            EMBL:AF414184 EMBL:BC113006 IPI:IPI00006498 IPI:IPI00382559
            IPI:IPI00401964 PIR:I38963 RefSeq:NP_001005785.1
            RefSeq:NP_001005786.2 RefSeq:NP_065096.2 UniGene:Hs.592257
            ProteinModelPortal:Q13117 SMR:Q13117 STRING:Q13117
            PhosphoSite:Q13117 DMDM:218512098 PRIDE:Q13117
            Ensembl:ENST00000382306 Ensembl:ENST00000382433
            Ensembl:ENST00000382449 GeneID:57055 KEGG:hsa:57055 UCSC:uc004fvq.3
            UCSC:uc022col.1 CTD:57055 GeneCards:GC0YP025365 H-InvDB:HIX0056667
            HGNC:HGNC:15964 MIM:400026 neXtProt:NX_Q13117 PharmGKB:PA27150
            HOGENOM:HOG000112149 OrthoDB:EOG43N7FJ GenomeRNAi:57055
            NextBio:62832 ArrayExpress:Q13117 Bgee:Q13117 CleanEx:HS_DAZ2
            Genevestigator:Q13117 GermOnline:ENSG00000205944 Uniprot:Q13117
        Length = 558

 Score = 127 (49.8 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|G4N7J4 [details] [associations]
            symbol:MGG_06400 "Nuclear and cytoplasmic polyadenylated
            RNA-binding protein pub1" species:242507 "Magnaporthe oryzae 70-15"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CM001234
            KO:K13201 RefSeq:XP_003717170.1 ProteinModelPortal:G4N7J4
            EnsemblFungi:MGG_06400T0 GeneID:2684555 KEGG:mgr:MGG_06400
            Uniprot:G4N7J4
        Length = 479

 Score = 126 (49.4 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 30/103 (29%), Positives = 53/103 (51%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             + ++VG L   + E+ L   F +TG + ++K+I +K       YGFVE+     A++ +Q
Sbjct:    85 RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAK-GYNYGFVEYDDPGAADRAMQ 143

Query:   153 SYTSILMPNTDQPFRLNWA-TFSTGDKRSDNGPDLSIFVGDLA 194
             +     +  ++   R+NWA   +T   + D      IFVGDL+
Sbjct:   144 TLNGRRVHQSE--IRVNWAYQAATSATKEDTSNHFHIFVGDLS 184

 Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL + +++  L   F+  G ++  +V+ + +TG S GYGFV F   + AEK L S 
Sbjct:   178 IFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSM 237

Query:   155 TSILMPNTDQPFRLNWA 171
                 + +  +  R NWA
Sbjct:   238 DGEWLGS--RAIRCNWA 252


>UNIPROTKB|Q86SG3 [details] [associations]
            symbol:DAZ4 "Deleted in azoospermia protein 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007283 GO:GO:0003723 EMBL:AC006338 UniGene:Hs.522868
            UniGene:Hs.70936 MIM:400003 MIM:415000 Orphanet:1646
            HOVERGEN:HBG048860 GermOnline:ENSG00000188120 EMBL:AF248482
            EMBL:AF248483 EMBL:BC047480 EMBL:BC047617 IPI:IPI00160336
            IPI:IPI00401506 RefSeq:NP_001005375.1 RefSeq:NP_065153.1
            ProteinModelPortal:Q86SG3 SMR:Q86SG3 STRING:Q86SG3
            PhosphoSite:Q86SG3 DMDM:44887840 PRIDE:Q86SG3
            Ensembl:ENST00000440066 Ensembl:ENST00000449750 GeneID:57135
            KEGG:hsa:57135 UCSC:uc004fvm.3 UCSC:uc004fvn.3 CTD:57135
            GeneCards:GC0YP026979 HGNC:HGNC:15966 neXtProt:NX_Q86SG3
            PharmGKB:PA27152 InParanoid:Q86SG3 ChiTaRS:DAZ4 GenomeRNAi:57135
            NextBio:63055 ArrayExpress:Q86SG3 Bgee:Q86SG3 CleanEx:HS_DAZ4
            Genevestigator:Q86SG3 Uniprot:Q86SG3
        Length = 579

 Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:   206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 264

 Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|F5H3W3 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00985133
            ProteinModelPortal:F5H3W3 SMR:F5H3W3 Ensembl:ENST00000382424
            ArrayExpress:F5H3W3 Bgee:F5H3W3 Uniprot:F5H3W3
        Length = 606

 Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|Q1RMF9 [details] [associations]
            symbol:DAZ1 "DAZ1 protein" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 RefSeq:NP_004072.3
            UniGene:Hs.522868 UniGene:Hs.70936 GeneID:1617 KEGG:hsa:1617
            CTD:1617 HGNC:HGNC:2682 PharmGKB:PA27149 HOVERGEN:HBG048860
            GenomeRNAi:1617 NextBio:6642 EMBL:AC053490 EMBL:AC010088
            EMBL:BC114927 IPI:IPI00942129 SMR:Q1RMF9 STRING:Q1RMF9
            Ensembl:ENST00000382510 Uniprot:Q1RMF9
        Length = 613

 Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:   371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 429

 Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:   206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 264

 Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>ZFIN|ZDB-GENE-030131-2167 [details] [associations]
            symbol:tia1l "cytotoxic granule-associated RNA
            binding protein 1, like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-2167 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:P11940 GeneTree:ENSGT00680000099967 KO:K13201
            OMA:PAYNTTV HOVERGEN:HBG105006 EMBL:BX088551 EMBL:BC045485
            EMBL:BC066734 IPI:IPI00499030 RefSeq:NP_956476.1 UniGene:Dr.5585
            SMR:Q7ZVM6 Ensembl:ENSDART00000003957 GeneID:323447 KEGG:dre:323447
            CTD:323447 InParanoid:Q7ZVM6 NextBio:20808253 Uniprot:Q7ZVM6
        Length = 342

 Score = 123 (48.4 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 27/88 (30%), Positives = 46/88 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +  + + + FA  G+I+  +V+++  TG S+GYGF+ F     AE  +Q  
Sbjct:    99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQM 158

Query:   155 TSILMPNTDQPFRLNWATFSTGDKRSDN 182
                 +    +  R NWAT      +S+N
Sbjct:   159 NGQWLGG--RQIRTNWATRKPSAPKSNN 184

 Score = 106 (42.4 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 30/104 (28%), Positives = 53/104 (50%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             +T++VG+L   + E  +   F+  G   S K+I +  TG ++ Y FVEF+ +  A   L 
Sbjct:     9 RTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDT-TG-NDPYCFVEFYENRHAAAALA 66

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   D   ++NWA+  +  K+ D      +FVGDL+ +
Sbjct:    67 AMNGRKILGKDM--KVNWASTPSSQKK-DTSNHFHVFVGDLSPE 107


>UNIPROTKB|E9PBY2 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00644348
            ProteinModelPortal:E9PBY2 SMR:E9PBY2 PRIDE:E9PBY2
            Ensembl:ENST00000382440 OMA:DSKIPEF ArrayExpress:E9PBY2 Bgee:E9PBY2
            Uniprot:E9PBY2
        Length = 654

 Score = 127 (49.8 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|B1AM48 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623 UniGene:Hs.166109
            HGNC:HGNC:3313 OrthoDB:EOG4JHCFV IPI:IPI00184721 SMR:B1AM48
            Ensembl:ENST00000440102 Uniprot:B1AM48
        Length = 189

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|F1PL96 [details] [associations]
            symbol:DAZL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00530000063480 EMBL:AAEX03013583
            Ensembl:ENSCAFT00000009460 Uniprot:F1PL96
        Length = 413

 Score = 124 (48.7 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + S FA  G +  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    42 TVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVES 100


>WB|WBGene00003903 [details] [associations]
            symbol:pab-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0000003
            GO:GO:0003723 eggNOG:COG0724 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 HSSP:P11940
            GeneTree:ENSGT00640000091232 EMBL:Z50110 PIR:T21095
            RefSeq:NP_510260.1 ProteinModelPortal:Q19579 SMR:Q19579
            STRING:Q19579 PaxDb:Q19579 PRIDE:Q19579 EnsemblMetazoa:F18H3.3a.1
            EnsemblMetazoa:F18H3.3a.2 EnsemblMetazoa:F18H3.3a.3
            EnsemblMetazoa:F18H3.3a.4 GeneID:181473 KEGG:cel:CELE_F18H3.3
            UCSC:F18H3.3a.3 CTD:181473 WormBase:F18H3.3a InParanoid:Q19579
            OMA:YEESNIG NextBio:914090 ArrayExpress:Q19579 Uniprot:Q19579
        Length = 692

 Score = 127 (49.8 bits), Expect = 4.0e-07, P = 4.0e-07
 Identities = 31/100 (31%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             ++++GDLH  + E  L   F+  G + SI+V R+  + LS GY +V F   A AE+ L +
Sbjct:    58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      +R+ NG   +IF+ +L
Sbjct:   118 MNFEVIHG--RPMRIMWSQRDPAARRAGNG---NIFIKNL 152


>UNIPROTKB|Q86U06 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL132780 EMBL:CH471078 eggNOG:COG0724 EMBL:AL135998
            EMBL:AF087905 EMBL:AF275678 EMBL:AK001344 EMBL:AL834198
            EMBL:BX161440 EMBL:BC002566 EMBL:BC024208 IPI:IPI00168431
            IPI:IPI00376960 IPI:IPI00376962 IPI:IPI00376963 IPI:IPI00386141
            RefSeq:NP_001070819.1 RefSeq:NP_001070820.1 RefSeq:NP_060577.3
            UniGene:Hs.4997 PDB:2CQ4 PDB:2DNZ PDBsum:2CQ4 PDBsum:2DNZ
            ProteinModelPortal:Q86U06 SMR:Q86U06 IntAct:Q86U06
            MINT:MINT-1382566 STRING:Q86U06 PhosphoSite:Q86U06 DMDM:34925229
            PaxDb:Q86U06 PRIDE:Q86U06 DNASU:55147 Ensembl:ENST00000346528
            Ensembl:ENST00000359890 Ensembl:ENST00000399922 GeneID:55147
            KEGG:hsa:55147 UCSC:uc001whg.3 UCSC:uc001whh.3 UCSC:uc001whi.3
            UCSC:uc001whk.1 CTD:55147 GeneCards:GC14M023369 HGNC:HGNC:20155
            HPA:HPA004144 neXtProt:NX_Q86U06 PharmGKB:PA134974852
            HOVERGEN:HBG057646 InParanoid:Q86U06 OMA:VTERLDG PhylomeDB:Q86U06
            ChiTaRS:RBM23 EvolutionaryTrace:Q86U06 GenomeRNAi:55147
            NextBio:58862 ArrayExpress:Q86U06 Bgee:Q86U06 CleanEx:HS_RBM23
            Genevestigator:Q86U06 GermOnline:ENSG00000100461 TIGRFAMs:TIGR01622
            Uniprot:Q86U06
        Length = 439

 Score = 124 (48.7 bits), Expect = 4.3e-07, P = 4.3e-07
 Identities = 32/109 (29%), Positives = 52/109 (47%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G G    ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F     A
Sbjct:   258 GNGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 317

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              + L+      +    +P R+   T     +R D G D++   GD   D
Sbjct:   318 RRALEQLNGFELAG--RPMRVGHVT-----ERLDGGTDITFPDGDQELD 359


>UNIPROTKB|E1BNB4 [details] [associations]
            symbol:PABPC1L "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 EMBL:DAAA02036735
            EMBL:DAAA02036734 IPI:IPI00715420 ProteinModelPortal:E1BNB4
            Ensembl:ENSBTAT00000022412 OMA:VMTESSH Uniprot:E1BNB4
        Length = 618

 Score = 126 (49.4 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 33/100 (33%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    QP R+ W+    G ++S  G   +IF+ +L
Sbjct:    72 MNFEVIKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNL 106

 Score = 109 (43.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G+   E   I+V +LH  +DE  L   F+  G++ S+KV+R+  +G S G+GFV F  H 
Sbjct:   184 GARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHE 242

Query:   146 TAEKVL 151
              A+K +
Sbjct:   243 EAQKAV 248


>UNIPROTKB|Q9NQZ3 [details] [associations]
            symbol:DAZ1 "Deleted in azoospermia protein 1" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=IDA] [GO:0045948 "positive regulation of translational
            initiation" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005634
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007283 GO:GO:0003723 GO:GO:0008494 GO:GO:0045948
            EMBL:AC006338 EMBL:AF271087 EMBL:AF271088 IPI:IPI00334616
            RefSeq:NP_004072.3 UniGene:Hs.522868 UniGene:Hs.70936
            ProteinModelPortal:Q9NQZ3 SMR:Q9NQZ3 IntAct:Q9NQZ3 MINT:MINT-254473
            STRING:Q9NQZ3 PhosphoSite:Q9NQZ3 DMDM:44887841 PRIDE:Q9NQZ3
            Ensembl:ENST00000405239 GeneID:1617 KEGG:hsa:1617 UCSC:uc004fvl.3
            CTD:1617 GeneCards:GC0YM025275 HGNC:HGNC:2682 MIM:400003 MIM:415000
            neXtProt:NX_Q9NQZ3 Orphanet:1646 PharmGKB:PA27149 eggNOG:KOG0118
            HOGENOM:HOG000207950 HOVERGEN:HBG048860 InParanoid:Q9NQZ3
            OMA:NYQAYSP GenomeRNAi:1617 NextBio:6642 ArrayExpress:Q9NQZ3
            Bgee:Q9NQZ3 CleanEx:HS_DAZ1 Genevestigator:Q9NQZ3
            GermOnline:ENSG00000188120 Uniprot:Q9NQZ3
        Length = 744

 Score = 127 (49.8 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:   371 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 429

 Score = 127 (49.8 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:   206 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 264

 Score = 127 (49.8 bits), Expect = 4.4e-07, P = 4.4e-07
 Identities = 24/60 (40%), Positives = 37/60 (61%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:    41 TVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 99


>UNIPROTKB|E2RND1 [details] [associations]
            symbol:PABPC1L "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 OMA:MNFEMLK
            EMBL:AAEX03013964 Ensembl:ENSCAFT00000015215 Uniprot:E2RND1
        Length = 644

 Score = 126 (49.4 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 33/100 (33%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    QP R+ W+    G ++S  G   +IF+ +L
Sbjct:    72 MNFEVIKG--QPIRIMWSQRDPGLRKSGVG---NIFIKNL 106

 Score = 107 (42.7 bits), Expect = 5.1e-05, P = 5.1e-05
 Identities = 25/66 (37%), Positives = 39/66 (59%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G+   E   I+V +LH  +DE  L   F+  G++ S+KV+R+  +G S G+GFV F  H 
Sbjct:   184 GARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRD-DSGHSRGFGFVNFQKHE 242

Query:   146 TAEKVL 151
              A+K +
Sbjct:   243 EAQKAV 248


>UNIPROTKB|B1ANR1 [details] [associations]
            symbol:PABPC4 "Polyadenylate-binding protein 4"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AL365277 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000217922 EMBL:AL845289 UniGene:Hs.169900 HGNC:HGNC:8557
            ChiTaRS:PABPC4 IPI:IPI00644016 SMR:B1ANR1 STRING:B1ANR1
            Ensembl:ENST00000451091 Uniprot:B1ANR1
        Length = 129

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|E5RH24 [details] [associations]
            symbol:PABPC1 "Polyadenylate-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP001205 HGNC:HGNC:8554 ChiTaRS:PABPC1 IPI:IPI00979703
            ProteinModelPortal:E5RH24 SMR:E5RH24 Ensembl:ENST00000520142
            ArrayExpress:E5RH24 Bgee:E5RH24 Uniprot:E5RH24
        Length = 118

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106


>UNIPROTKB|E5RJB9 [details] [associations]
            symbol:PABPC1 "Polyadenylate-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP001205 HGNC:HGNC:8554 ChiTaRS:PABPC1 IPI:IPI01013146
            ProteinModelPortal:E5RJB9 SMR:E5RJB9 Ensembl:ENST00000521865
            ArrayExpress:E5RJB9 Bgee:E5RJB9 Uniprot:E5RJB9
        Length = 129

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106


>UNIPROTKB|E7ETC0 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
            ChiTaRS:TIAL1 IPI:IPI01012546 ProteinModelPortal:E7ETC0 SMR:E7ETC0
            Ensembl:ENST00000497671 ArrayExpress:E7ETC0 Bgee:E7ETC0
            Uniprot:E7ETC0
        Length = 135

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 31/107 (28%), Positives = 54/107 (50%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             G+ +T++VG+L   + E  +   F+  G   S K+I  + T  ++ Y FVEF+ H  A  
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI-TEHTS-NDPYCFVEFYEHRDAAA 63

Query:   150 VLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              L +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    64 ALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 107


>UNIPROTKB|D4A7H4 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00214634 ProteinModelPortal:D4A7H4
            Ensembl:ENSRNOT00000023323 Uniprot:D4A7H4
        Length = 281

 Score = 120 (47.3 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:    93 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 152

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   153 GGQWLGG--RQIRTNWAT 168

 Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E  +   F+  G   + K+I +  T  ++ Y FVEF  H  A   L 
Sbjct:     3 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 60

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    61 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 101


>UNIPROTKB|C9JTN7 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000206748
            EMBL:AC016700 HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00927286
            ProteinModelPortal:C9JTN7 SMR:C9JTN7 STRING:C9JTN7
            Ensembl:ENST00000445587 ArrayExpress:C9JTN7 Bgee:C9JTN7
            Uniprot:C9JTN7
        Length = 285

 Score = 120 (47.3 bits), Expect = 5.2e-07, P = 5.2e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   157 GGQWLGG--RQIRTNWAT 172

 Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E  +   F+  G   + K+I +  T  ++ Y FVEF  H  A   L 
Sbjct:     7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 105


>FB|FBgn0010258 [details] [associations]
            symbol:Rbp4 "RNA-binding protein 4" species:7227 "Drosophila
            melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003727
            "single-stranded RNA binding" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=ISS] [GO:0003729 "mRNA binding"
            evidence=ISS;NAS] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0003729
            GO:GO:0003727 Gene3D:3.30.70.330 HSSP:P09651 EMBL:U18401
            ProteinModelPortal:Q24024 SMR:Q24024 IntAct:Q24024 PRIDE:Q24024
            FlyBase:FBgn0010258 eggNOG:NOG289504 InParanoid:Q24024
            OrthoDB:EOG4CNP6S Bgee:Q24024 Uniprot:Q24024
        Length = 428

 Score = 123 (48.4 bits), Expect = 5.3e-07, P = 5.3e-07
 Identities = 23/65 (35%), Positives = 41/65 (63%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             +G   +K I++G L  + DEN +   F+  G +AS+K++ +++TG    +GF+EF   ++
Sbjct:   130 AGFMNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSS 189

Query:   147 AEKVL 151
             AEK L
Sbjct:   190 AEKAL 194


>GENEDB_PFALCIPARUM|PFL1170w [details] [associations]
            symbol:PFL1170w "polyadenylate-binding protein,
            putative" species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
            [GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0006396 EMBL:AE014188 GO:GO:0008143 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 HSSP:P11940 RefSeq:XP_001350640.1
            ProteinModelPortal:Q8I5H4 SMR:Q8I5H4 IntAct:Q8I5H4
            MINT:MINT-1695921 EnsemblProtists:PFL1170w:mRNA GeneID:811286
            KEGG:pfa:PFL1170w EuPathDB:PlasmoDB:PF3D7_1224300 OMA:YEDEESA
            ProtClustDB:CLSZ2500971 Uniprot:Q8I5H4
        Length = 875

 Score = 127 (49.8 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 35/102 (34%), Positives = 56/102 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDL+  + E  L+  F + G ++SI+V R+  T  S GY +V +   A AE+ L +
Sbjct:    17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76

Query:   154 --YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
               YT+I      QP RL W+      ++S  G   +IFV +L
Sbjct:    77 LNYTNI----KGQPARLMWSHRDPSLRKSGTG---NIFVKNL 111


>UNIPROTKB|Q8I5H4 [details] [associations]
            symbol:PFL1170w "Polyadenylate-binding protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0008143
            "poly(A) RNA binding" evidence=ISS] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0006396 EMBL:AE014188 GO:GO:0008143 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 HSSP:P11940 RefSeq:XP_001350640.1
            ProteinModelPortal:Q8I5H4 SMR:Q8I5H4 IntAct:Q8I5H4
            MINT:MINT-1695921 EnsemblProtists:PFL1170w:mRNA GeneID:811286
            KEGG:pfa:PFL1170w EuPathDB:PlasmoDB:PF3D7_1224300 OMA:YEDEESA
            ProtClustDB:CLSZ2500971 Uniprot:Q8I5H4
        Length = 875

 Score = 127 (49.8 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 35/102 (34%), Positives = 56/102 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDL+  + E  L+  F + G ++SI+V R+  T  S GY +V +   A AE+ L +
Sbjct:    17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 76

Query:   154 --YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
               YT+I      QP RL W+      ++S  G   +IFV +L
Sbjct:    77 LNYTNI----KGQPARLMWSHRDPSLRKSGTG---NIFVKNL 111


>WB|WBGene00012904 [details] [associations]
            symbol:tiar-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HSSP:P11940 EMBL:AL110485 GeneTree:ENSGT00680000099967
            HOGENOM:HOG000206748 KO:K13201 RefSeq:NP_496718.1 UniGene:Cel.14057
            ProteinModelPortal:Q9U2F5 SMR:Q9U2F5 IntAct:Q9U2F5 PaxDb:Q9U2F5
            EnsemblMetazoa:Y46G5A.13 GeneID:174909 KEGG:cel:CELE_Y46G5A.13
            UCSC:Y46G5A.13 CTD:174909 WormBase:Y46G5A.13 InParanoid:Q9U2F5
            NextBio:886000 Uniprot:Q9U2F5
        Length = 434

 Score = 123 (48.4 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 28/91 (30%), Positives = 43/91 (47%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +D   L   F   GE++  K+IR+  T   +GYGFV +     AE+ +   
Sbjct:   134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193

Query:   155 TSILMPNTDQPFRLNWATFSTGDKRSDNGPD 185
                 +    +  R NWAT    D+  + G D
Sbjct:   194 NGAWLGR--RTIRTNWATRKP-DEDGERGGD 221

 Score = 112 (44.5 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 32/114 (28%), Positives = 55/114 (48%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             SG  + +T++V +L   + + +L + F   G +   K+I     GL++ Y FVEF  H  
Sbjct:    34 SGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHNQ 90

Query:   147 AEKVLQSYTSILMPNTDQPFRLNWA--TFSTGDKRS--DNGPDLSIFVGDLAAD 196
             A   LQS+    +   ++   + WA      G+ RS  +      +FVGDL ++
Sbjct:    91 ATLALQSHNGREL--LEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSE 142


>UNIPROTKB|F1SDR6 [details] [associations]
            symbol:PABPC1L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 OMA:MNFEMLK
            EMBL:CU633343 Ensembl:ENSSSCT00000008080 Uniprot:F1SDR6
        Length = 608

 Score = 125 (49.1 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 32/100 (32%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    QP R+ W+    G ++S  G   ++F+ +L
Sbjct:    72 MNFEVIKG--QPIRIMWSQRDPGLRKSGVG---NVFIKNL 106

 Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G+   E   I+V +LH  +DE  L   F+  G+I S+KV+R+  +G S G+GFV F  H 
Sbjct:   184 GARALEFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRD-DSGHSRGFGFVNFEKHE 242

Query:   146 TAEKVL 151
              A+K +
Sbjct:   243 DAQKAV 248


>ZFIN|ZDB-GENE-030131-1506 [details] [associations]
            symbol:tia1 "cytotoxic granule-associated RNA
            binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030131-1506 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:WAVEPGQ
            EMBL:CT027545 EMBL:AL928954 EMBL:BC045368 IPI:IPI00511851
            RefSeq:NP_997793.1 UniGene:Dr.159520 SMR:Q7ZVY0
            Ensembl:ENSDART00000074400 GeneID:793165 KEGG:dre:793165
            InParanoid:Q7ZVY0 NextBio:20931339 Uniprot:Q7ZVY0
        Length = 386

 Score = 122 (48.0 bits), Expect = 5.7e-07, P = 5.7e-07
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +  + + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:    98 VFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 157

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   158 GGQWLGG--RQIRTNWAT 173

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/104 (30%), Positives = 51/104 (49%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E  +   F   G   S K+I +  T  ++ Y FVEFF H  A   L 
Sbjct:     8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVD--TAGNDPYCFVEFFEHRHAAASLA 65

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   +   ++NWAT S   ++ D      +FVGDL+ +
Sbjct:    66 AMNGRKIMGKE--VKVNWAT-SPSSQKKDTSNHFHVFVGDLSPE 106


>WB|WBGene00000774 [details] [associations]
            symbol:cpf-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016607 "nuclear speck"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0006898
            GO:GO:0016246 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0000003 GO:GO:0003676 GO:GO:0040027 eggNOG:COG0724 KO:K14407
            InterPro:IPR025742 InterPro:IPR026896 Pfam:PF14327 Pfam:PF14304
            GeneTree:ENSGT00550000074641 HSSP:P33240 EMBL:Z83230 PIR:T22767
            RefSeq:NP_499734.1 ProteinModelPortal:O45577 SMR:O45577
            DIP:DIP-27144N IntAct:O45577 MINT:MINT-1049050 STRING:O45577
            PaxDb:O45577 EnsemblMetazoa:F56A8.6.1 EnsemblMetazoa:F56A8.6.2
            GeneID:176742 KEGG:cel:CELE_F56A8.6 UCSC:F56A8.6.1 CTD:176742
            WormBase:F56A8.6 HOGENOM:HOG000214372 InParanoid:O45577 OMA:VENPYGE
            NextBio:893824 Uniprot:O45577
        Length = 336

 Score = 120 (47.3 bits), Expect = 7.4e-07, P = 7.4e-07
 Identities = 23/70 (32%), Positives = 46/70 (65%)

Query:    87 SGGGENKT---IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFT 143
             SG G +++   ++VG++ + + E+ + S F+  G + SIK++ +++TG  +GYGF+EF  
Sbjct:     9 SGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68

Query:   144 HATAEKVLQS 153
               TAE  +++
Sbjct:    69 IQTAEVAIRN 78


>WB|WBGene00001368 [details] [associations]
            symbol:exc-7 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0002064 "epithelial cell development"
            evidence=IMP] [GO:0035150 "regulation of tube size" evidence=IMP]
            [GO:0016607 "nuclear speck" evidence=IDA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0002064 eggNOG:COG0724 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 HSSP:P26378 GeneTree:ENSGT00560000077064
            OMA:DIGESKT GO:GO:0035150 EMBL:Z36752 PIR:T21822 RefSeq:NP_496057.1
            ProteinModelPortal:Q20084 SMR:Q20084 DIP:DIP-27011N IntAct:Q20084
            MINT:MINT-1038844 STRING:Q20084 PaxDb:Q20084 EnsemblMetazoa:F35H8.5
            GeneID:174506 KEGG:cel:CELE_F35H8.5 CTD:174506 WormBase:F35H8.5
            InParanoid:Q20084 NextBio:884320 Uniprot:Q20084
        Length = 456

 Score = 122 (48.0 bits), Expect = 7.6e-07, P = 7.6e-07
 Identities = 30/94 (31%), Positives = 50/94 (53%)

Query:    90 GENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             GE+KT + +  L   M +  + S F S GEI S K++R+K TG S GYGFV +     A 
Sbjct:    38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97

Query:   149 KVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
             + + S+  + + N  +  ++++A  S    +  N
Sbjct:    98 RAVSSFNGLRLQN--KTIKVSYARPSNDQIKGSN 129


>CGD|CAL0001768 [details] [associations]
            symbol:orf19.1876 species:5476 "Candida albicans" [GO:0005685
            "U1 snRNP" evidence=IEA] [GO:0071004 "U2-type prespliceosome"
            evidence=IEA] [GO:0000243 "commitment complex" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] [GO:0048026 "positive
            regulation of mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0006376 "mRNA splice site selection" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 CGD:CAL0001768 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 EMBL:AACQ01000133 EMBL:AACQ01000132
            RefSeq:XP_713133.1 RefSeq:XP_713179.1 ProteinModelPortal:Q59U75
            GeneID:3645147 GeneID:3645207 KEGG:cal:CaO19.1876
            KEGG:cal:CaO19.9432 Uniprot:Q59U75
        Length = 452

 Score = 106 (42.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
 Identities = 28/106 (26%), Positives = 57/106 (53%)

Query:    95 IWVGDLH-HWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +W+GDL   W +E+  +       +   +K++R++       Y FV F    + +  +Q 
Sbjct:    85 MWMGDLDPQWTEESIDNLWTKLVSKPHHVKIMRDRLQPSKPSYCFVTFRDQESIDLAIQR 144

Query:   154 YTSILMPNTDQPFRLNWA-TFSTG--DKRSDNGPDLSIFVGDLAAD 196
                  +P++++ F+LN++   STG  D+ +++  + SIF+GDLA +
Sbjct:   145 -NGQKVPDSNRVFKLNYSGRNSTGSHDRSTNSSNEYSIFIGDLAPE 189

 Score = 36 (17.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:    86 GSGGGENK 93
             GSGGG N+
Sbjct:    26 GSGGGNNR 33


>UNIPROTKB|Q800W4 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0042036 "negative regulation of cytokine biosynthetic process"
            evidence=IEA] [GO:0048024 "regulation of mRNA splicing, via
            spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            HSSP:P11940 GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:TSAPWMG
            UniGene:Gga.12064 UniGene:Gga.8269 EMBL:AADN02059907
            EMBL:AADN02059908 EMBL:AADN02059909 EMBL:AY189903 IPI:IPI00577572
            RefSeq:NP_001244132.1 SMR:Q800W4 STRING:Q800W4
            Ensembl:ENSGALT00000022506 GeneID:771327 KEGG:gga:771327
            InParanoid:Q800W4 NextBio:20921528 Uniprot:Q800W4
        Length = 372

 Score = 120 (47.3 bits), Expect = 8.9e-07, P = 8.9e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   157 GGQWLGG--RQIRTNWAT 172

 Score = 113 (44.8 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 30/104 (28%), Positives = 52/104 (50%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E  +   F+  G   + K+I +  T  ++ Y FVEF+ H  A   L 
Sbjct:     7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALA 64

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 105


>RGD|1305742 [details] [associations]
            symbol:Tia1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA;ISO] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO] [GO:0017148 "negative regulation of
            translation" evidence=IEA;ISO] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA;ISO] [GO:0048024
            "regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CH473957 eggNOG:COG0724
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 EMBL:BC087064 IPI:IPI00563419
            RefSeq:NP_001012096.1 UniGene:Rn.198158 SMR:Q5PQR7 STRING:Q5PQR7
            Ensembl:ENSRNOT00000023103 GeneID:312510 KEGG:rno:312510
            UCSC:RGD:1305742 NextBio:664964 Genevestigator:Q5PQR7
            Uniprot:Q5PQR7
        Length = 375

 Score = 120 (47.3 bits), Expect = 9.0e-07, P = 9.0e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   157 GGQWLGG--RQIRTNWAT 172

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             KT++VG+L   + E  +   F+  G   + K+I +  T  ++ Y FVEF  H  A   L 
Sbjct:     7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALA 64

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
             +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    65 AMNGRKIMGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 105


>UNIPROTKB|D4A6U8 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
            OrthoDB:EOG4B5P59 IPI:IPI00778030 ProteinModelPortal:D4A6U8
            Ensembl:ENSRNOT00000041366 Uniprot:D4A6U8
        Length = 382

 Score = 120 (47.3 bits), Expect = 9.3e-07, P = 9.3e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   104 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 163

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   164 GGQWLGG--RQIRTNWAT 179


>UNIPROTKB|Q0VBZ6 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:9913 "Bos taurus" [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0042036 "negative
            regulation of cytokine biosynthetic process" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 eggNOG:COG0724 GeneTree:ENSGT00680000099967
            HOGENOM:HOG000206748 KO:K13201 CTD:7072 HOVERGEN:HBG105006
            OrthoDB:EOG4B5P59 OMA:TSAPWMG EMBL:DAAA02031534 EMBL:BC120427
            IPI:IPI00707848 RefSeq:NP_001069577.1 UniGene:Bt.91654 SMR:Q0VBZ6
            Ensembl:ENSBTAT00000025528 GeneID:538533 KEGG:bta:538533
            InParanoid:Q0VBZ6 NextBio:20877426 Uniprot:Q0VBZ6
        Length = 384

 Score = 120 (47.3 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>UNIPROTKB|F8W8I6 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC016700
            HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00926358
            ProteinModelPortal:F8W8I6 SMR:F8W8I6 PRIDE:F8W8I6
            Ensembl:ENST00000282574 ArrayExpress:F8W8I6 Bgee:F8W8I6
            Uniprot:F8W8I6
        Length = 385

 Score = 120 (47.3 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>UNIPROTKB|P31483 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0017091 "AU-rich
            element binding" evidence=IEA] [GO:0017148 "negative regulation of
            translation" evidence=IEA] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048024 "regulation of mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0006917 "induction of apoptosis" evidence=TAS]
            [GO:0008143 "poly(A) RNA binding" evidence=TAS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 EMBL:CH471053
            GO:GO:0006917 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            GO:GO:0008143 HOGENOM:HOG000206748 KO:K13201 EMBL:M77142
            EMBL:S70114 EMBL:AC016700 IPI:IPI00291398 IPI:IPI00333996
            PIR:A39293 RefSeq:NP_071320.2 RefSeq:NP_071505.2 UniGene:Hs.413123
            PDB:3BS9 PDBsum:3BS9 ProteinModelPortal:P31483 SMR:P31483
            IntAct:P31483 STRING:P31483 PhosphoSite:P31483 DMDM:206729905
            PaxDb:P31483 PRIDE:P31483 Ensembl:ENST00000415783
            Ensembl:ENST00000433529 GeneID:7072 KEGG:hsa:7072 UCSC:uc002sgj.4
            UCSC:uc002sgk.4 CTD:7072 GeneCards:GC02M070437 HGNC:HGNC:11802
            MIM:603518 neXtProt:NX_P31483 PharmGKB:PA36511 HOVERGEN:HBG105006
            InParanoid:P31483 OrthoDB:EOG4B5P59 PhylomeDB:P31483 ChiTaRS:TIA1
            EvolutionaryTrace:P31483 GenomeRNAi:7072 NextBio:27655
            ArrayExpress:P31483 Bgee:P31483 CleanEx:HS_TIA1
            Genevestigator:P31483 GermOnline:ENSG00000116001 Uniprot:P31483
        Length = 386

 Score = 120 (47.3 bits), Expect = 9.5e-07, P = 9.5e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>MGI|MGI:107914 [details] [associations]
            symbol:Tia1 "cytotoxic granule-associated RNA binding protein
            1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0017091 "AU-rich element binding"
            evidence=IDA] [GO:0017148 "negative regulation of translation"
            evidence=IMP] [GO:0042036 "negative regulation of cytokine
            biosynthetic process" evidence=IMP] [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107914 GO:GO:0005634 GO:GO:0006915 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 GO:GO:0010494 eggNOG:COG0724 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:U00689
            EMBL:U55862 IPI:IPI00132462 PIR:S72435 RefSeq:NP_035715.1
            UniGene:Mm.333219 PDB:2DGO PDB:2RNE PDBsum:2DGO PDBsum:2RNE
            ProteinModelPortal:P52912 SMR:P52912 STRING:P52912
            PhosphoSite:P52912 PaxDb:P52912 PRIDE:P52912
            Ensembl:ENSMUST00000095753 GeneID:21841 KEGG:mmu:21841
            InParanoid:P52912 OMA:TSAPWMG EvolutionaryTrace:P52912
            NextBio:301304 Bgee:P52912 Genevestigator:P52912
            GermOnline:ENSMUSG00000071337 Uniprot:P52912
        Length = 386

 Score = 120 (47.3 bits), Expect = 9.5e-07, P = 9.5e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>UNIPROTKB|F1PWU8 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 OMA:TSAPWMG EMBL:AAEX03007635
            EMBL:AAEX03007634 Ensembl:ENSCAFT00000005363 Uniprot:F1PWU8
        Length = 393

 Score = 120 (47.3 bits), Expect = 9.8e-07, P = 9.8e-07
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + + FA  G I+  +V+++  TG S+GYGFV FF    AE  +Q  
Sbjct:   108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   168 GGQWLGG--RQIRTNWAT 183


>UNIPROTKB|F1MY46 [details] [associations]
            symbol:RBM23 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:DAAA02028045 OMA:VTERLDG
            TIGRFAMs:TIGR01622 GeneTree:ENSGT00690000102089 IPI:IPI00693162
            UniGene:Bt.91499 Ensembl:ENSBTAT00000023525 Uniprot:F1MY46
        Length = 463

 Score = 121 (47.7 bits), Expect = 9.9e-07, P = 9.9e-07
 Identities = 33/111 (29%), Positives = 54/111 (48%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GSGG     ++VG LH  + E+ L       G+I +I ++++ +TG S+GYGF+ F    
Sbjct:   273 GSGGPVR--LYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSE 330

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              A + L+      +    +P R+   T     +R D G D++   GD   D
Sbjct:   331 CARRALEQLNGFELAG--RPMRIGHVT-----ERPDGGTDITFPDGDQELD 374


>FB|FBgn0085391 [details] [associations]
            symbol:CG34362 species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0000381 GeneTree:ENSGT00680000099967
            RefSeq:NP_001163754.1 UniGene:Dm.13924 ProteinModelPortal:E1JIZ9
            SMR:E1JIZ9 EnsemblMetazoa:FBtr0301397 GeneID:43362
            KEGG:dme:Dmel_CG34362 FlyBase:FBgn0085391 GenomeRNAi:43362
            NextBio:833552 Bgee:E1JIZ9 Uniprot:E1JIZ9
        Length = 800

 Score = 124 (48.7 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 28/78 (35%), Positives = 42/78 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   ++   L   F   GEI+  +V+R+ QT  S+GYGFV F   + AE  + + 
Sbjct:   463 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 522

Query:   155 TSILMPNTDQPFRLNWAT 172
                 + +  +  R NWAT
Sbjct:   523 NGQWLGS--RSIRTNWAT 538


>RGD|1566367 [details] [associations]
            symbol:Pabpc1l2a "poly(A) binding protein, cytoplasmic 1-like
            2A" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1566367 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00640000091232
            IPI:IPI00769098 Ensembl:ENSRNOT00000029100 Uniprot:F1M8Y9
        Length = 200

 Score = 113 (44.8 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/100 (28%), Positives = 55/100 (55%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E+ L+  F+  G I SI++ R+K T  S GY +V +     A++ L++
Sbjct:     3 SLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALET 62

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    63 MNFDVI--NGRPVRIMWSQRDPSLRKSGVG---NVFIKNL 97


>WB|WBGene00007396 [details] [associations]
            symbol:tiar-3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0019722
            "calcium-mediated signaling" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            eggNOG:COG0724 GeneTree:ENSGT00680000099967 EMBL:Z78536
            RefSeq:NP_509705.3 ProteinModelPortal:Q93194 SMR:Q93194
            EnsemblMetazoa:C07A4.1 GeneID:182350 KEGG:cel:CELE_C07A4.1
            UCSC:C07A4.1 CTD:182350 WormBase:C07A4.1 OMA:ASEPPME Uniprot:Q93194
        Length = 450

 Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 29/87 (33%), Positives = 41/87 (47%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    L S F   GE++  KVIR+ QT  S+GYGFV F     AE  +   
Sbjct:   227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286

Query:   155 TSILMPNTDQPFRLNWATFSTGDKRSD 181
                 +    +  R NWA     ++  D
Sbjct:   287 NGKWIGK--RAVRTNWAARKNSEENRD 311


>ZFIN|ZDB-GENE-040704-9 [details] [associations]
            symbol:elavl2 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 2 (Hu antigen B)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040704-9 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OrthoDB:EOG4JHCFV EMBL:AL954145
            IPI:IPI00482002 UniGene:Dr.84858 SMR:Q1MT19
            Ensembl:ENSDART00000139420 InParanoid:Q1MT19 Uniprot:Q1MT19
        Length = 388

 Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 32/97 (32%), Positives = 51/97 (52%)

Query:    87 SGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             +G  ++KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +    
Sbjct:    61 NGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYMEPK 120

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
              AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   121 DAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 155


>UNIPROTKB|Q9TTV2 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9490 "Saguinus oedipus" [GO:0030529
            "ribonucleoprotein complex" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723
            GO:GO:0030529 HOVERGEN:HBG002295 HSSP:P22626 EMBL:AF192348
            ProteinModelPortal:Q9TTV2 SMR:Q9TTV2 Uniprot:Q9TTV2
        Length = 341

 Score = 118 (46.6 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/66 (37%), Positives = 41/66 (62%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   FA  G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   100 KKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 159

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   160 QKYHTI 165


>UNIPROTKB|F1LW17 [details] [associations]
            symbol:F1LW17 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00567724
            Ensembl:ENSRNOT00000046658 ArrayExpress:F1LW17 Uniprot:F1LW17
        Length = 249

 Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             K ++VG +    +E  L   F   G+I +I+V+  +Q+G   G+ FV F  H T +K+LQ
Sbjct:   116 KKLYVGGIKEDTEEYNLRGYFKKYGKIETIEVMEGRQSGKKRGFAFVTFDDHDTVDKILQ 175

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
              + +I   N +    L+    S G +R   G
Sbjct:   176 KHHAINGNNCEVGKVLSKEMQSAGSQRGRGG 206


>UNIPROTKB|F1LUE7 [details] [associations]
            symbol:F1LUE7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00566822
            Ensembl:ENSRNOT00000052211 ArrayExpress:F1LUE7 Uniprot:F1LUE7
        Length = 256

 Score = 115 (45.5 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             K ++VG +    +E  L   F   G+I +I+V+  +Q+G   G+ FV F  H T +K+LQ
Sbjct:    86 KKLYVGGIKEDTEEYNLRGYFKKYGKIETIEVMEGRQSGKKRGFAFVTFDDHDTVDKILQ 145

Query:   153 SYTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
              + +I   N +    L+    S G +R   G
Sbjct:   146 KHHAINGNNCEVGKVLSKEMQSAGSQRGRGG 176


>FB|FBgn0085383 [details] [associations]
            symbol:CG34354 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GeneTree:ENSGT00680000099967
            KO:K13201 RefSeq:NP_001097953.1 UniGene:Dm.16369
            ProteinModelPortal:A8JPX0 SMR:A8JPX0 EnsemblMetazoa:FBtr0112564
            GeneID:5740528 KEGG:dme:Dmel_CG34354 UCSC:CG34354-RA
            FlyBase:FBgn0085383 InParanoid:A8JPX0 OMA:KDAFTPF OrthoDB:EOG4FFBJQ
            PhylomeDB:A8JPX0 GenomeRNAi:5740528 NextBio:20891566 Bgee:A8JPX0
            Uniprot:A8JPX0
        Length = 525

 Score = 120 (47.3 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 28/78 (35%), Positives = 42/78 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   ++   L   F   GEI+  +V+R+ QT  S+GYGFV F   + AE  + + 
Sbjct:    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157

Query:   155 TSILMPNTDQPFRLNWAT 172
                 + +  +  R NWAT
Sbjct:   158 NGQWLGS--RSIRTNWAT 173


>CGD|CAL0001392 [details] [associations]
            symbol:orf19.3037 species:5476 "Candida albicans" [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
            evidence=IEA] [GO:0006446 "regulation of translational initiation"
            evidence=IEA] [GO:0060211 "regulation of nuclear-transcribed mRNA
            poly(A) tail shortening" evidence=IEA] [GO:0008143 "poly(A) RNA
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 CGD:CAL0001392
            GO:GO:0005634 GO:GO:0005737 EMBL:AACQ01000017 EMBL:AACQ01000015
            GO:GO:0006417 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0051028 eggNOG:COG0724 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628 HSSP:P11940
            RefSeq:XP_721264.1 RefSeq:XP_721535.1 ProteinModelPortal:Q5AI15
            SMR:Q5AI15 STRING:Q5AI15 PRIDE:Q5AI15 GeneID:3636891 GeneID:3637079
            KEGG:cal:CaO19.10555 KEGG:cal:CaO19.3037 Uniprot:Q5AI15
        Length = 629

 Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 31/108 (28%), Positives = 58/108 (53%)

Query:    87 SGGGENK-TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             SG  EN  +++VG+L+  ++E  L   F+  G+++SI+V R+  +  S GY +V +  + 
Sbjct:    45 SGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYE 104

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
               EK ++       P   +P R+ W+      +RS +G   +IF+ +L
Sbjct:   105 DGEKAIEELN--YNPIEGRPCRIMWSQRDPSARRSGDG---NIFIKNL 147

 Score = 96 (38.9 bits), Expect = 0.00074, P = 0.00074
 Identities = 24/73 (32%), Positives = 41/73 (56%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHAT 146
             SG G    I++ +LH  +D   LH  F++ G+I S KV  + + G S+ +GFV + T   
Sbjct:   137 SGDGN---IFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EFGQSKCFGFVHYETAEA 192

Query:   147 AEKVLQSYTSILM 159
             AE  +++   +L+
Sbjct:   193 AEAAIENVNGMLL 205


>UNIPROTKB|H9L019 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:AADN02044320 RefSeq:XP_423721.2 UniGene:Gga.51399
            ProteinModelPortal:H9L019 Ensembl:ENSGALT00000021786 GeneID:426042
            KEGG:gga:426042 Uniprot:H9L019
        Length = 418

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00033, P = 0.00033
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>TAIR|locus:2046298 [details] [associations]
            symbol:emb2444 "embryo defective 2444" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002685 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006135 HSSP:P11940
            KO:K12831 EMBL:AY150466 IPI:IPI00516901 PIR:B84565
            RefSeq:NP_179441.1 UniGene:At.20306 ProteinModelPortal:Q9ZU66
            SMR:Q9ZU66 STRING:Q9ZU66 PRIDE:Q9ZU66 EnsemblPlants:AT2G18510.1
            GeneID:816366 KEGG:ath:AT2G18510 TAIR:At2g18510 InParanoid:Q9ZU66
            OMA:FIEYRSE PhylomeDB:Q9ZU66 ProtClustDB:CLSN2683050
            Genevestigator:Q9ZU66 Uniprot:Q9ZU66
        Length = 363

 Score = 117 (46.2 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/107 (28%), Positives = 57/107 (53%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + ++ V +++ T L + YGF+E+ +   A+  
Sbjct:    23 QDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYA 82

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRS-DNGPDLSIFVGDLAAD 196
             ++    I +    +P R+N A+    DK+S D G +L  F+G+L  D
Sbjct:    83 IKVLNMIKLHG--KPIRVNKAS---QDKKSLDVGANL--FIGNLDPD 122

 Score = 102 (41.0 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 21/68 (30%), Positives = 41/68 (60%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++G+L   +DE  L+  F++ G IAS  K++R+  TG S G+GF+ + +   ++  ++S
Sbjct:   114 LFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIES 173

Query:   154 YTSILMPN 161
              T   + N
Sbjct:   174 MTGQYLSN 181


>UNIPROTKB|F1MWR2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:DAAA02007272 IPI:IPI00717302 RefSeq:NP_001192513.1
            UniGene:Bt.3914 ProteinModelPortal:F1MWR2
            Ensembl:ENSBTAT00000016577 GeneID:506123 KEGG:bta:506123
            NextBio:20867458 ArrayExpress:F1MWR2 Uniprot:F1MWR2
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>UNIPROTKB|E2R5T2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:AAEX03011046 EMBL:AAEX03011045 RefSeq:XP_540295.3
            ProteinModelPortal:E2R5T2 Ensembl:ENSCAFT00000018450 GeneID:483177
            KEGG:cfa:483177 NextBio:20857615 Uniprot:E2R5T2
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>UNIPROTKB|Q15427 [details] [associations]
            symbol:SF3B4 "Splicing factor 3B subunit 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=TAS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=TAS] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
            GO:GO:0000166 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:CH471121 GO:GO:0000398 EMBL:AL591493 eggNOG:COG0724
            HOVERGEN:HBG002295 GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831
            EMBL:AL590487 OMA:VSETLLW EMBL:L35013 EMBL:BC004273 EMBL:BC013886
            EMBL:BC090883 IPI:IPI00017339 PIR:A54964 RefSeq:NP_005841.1
            UniGene:Hs.516160 PDB:1X5T PDB:1X5U PDBsum:1X5T PDBsum:1X5U
            ProteinModelPortal:Q15427 SMR:Q15427 IntAct:Q15427
            MINT:MINT-1032702 STRING:Q15427 PhosphoSite:Q15427 DMDM:2500587
            PaxDb:Q15427 PeptideAtlas:Q15427 PRIDE:Q15427 DNASU:10262
            Ensembl:ENST00000271628 Ensembl:ENST00000582851 GeneID:10262
            KEGG:hsa:10262 UCSC:uc001etk.2 CTD:10262 GeneCards:GC01M149895
            HGNC:HGNC:10771 HPA:HPA028578 MIM:154400 MIM:605593
            neXtProt:NX_Q15427 Orphanet:245 PharmGKB:PA35689 InParanoid:Q15427
            OrthoDB:EOG4M65JJ PhylomeDB:Q15427 EvolutionaryTrace:Q15427
            GenomeRNAi:10262 NextBio:38880 ArrayExpress:Q15427 Bgee:Q15427
            CleanEx:HS_SF3B4 Genevestigator:Q15427 GermOnline:ENSG00000143368
            Uniprot:Q15427
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>UNIPROTKB|F1SDG0 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:CU468464 RefSeq:XP_001926524.1 UniGene:Ssc.3222
            ProteinModelPortal:F1SDG0 Ensembl:ENSSSCT00000007303
            GeneID:100157814 KEGG:ssc:100157814 Uniprot:F1SDG0
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>MGI|MGI:109580 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:109580 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 CTD:10262
            OrthoDB:EOG4M65JJ EMBL:AK047751 EMBL:AK135543 EMBL:BC024418
            EMBL:BC026567 EMBL:BC085273 IPI:IPI00154082 RefSeq:NP_694693.1
            UniGene:Mm.219671 ProteinModelPortal:Q8QZY9 SMR:Q8QZY9
            IntAct:Q8QZY9 STRING:Q8QZY9 PhosphoSite:Q8QZY9 PaxDb:Q8QZY9
            PRIDE:Q8QZY9 Ensembl:ENSMUST00000076372 GeneID:107701
            KEGG:mmu:107701 UCSC:uc008qme.1 InParanoid:Q8QZY9 OMA:FASISHH
            NextBio:359278 Bgee:Q8QZY9 Genevestigator:Q8QZY9 Uniprot:Q8QZY9
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>RGD|1309667 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA;ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309667 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 OMA:VSETLLW CTD:10262
            OrthoDB:EOG4M65JJ EMBL:BC078997 IPI:IPI00371860
            RefSeq:NP_001011951.1 UniGene:Rn.116275 ProteinModelPortal:Q6AYL5
            SMR:Q6AYL5 STRING:Q6AYL5 PRIDE:Q6AYL5 Ensembl:ENSRNOT00000028758
            GeneID:295270 KEGG:rno:295270 UCSC:RGD:1309667 InParanoid:Q6AYL5
            NextBio:639268 Genevestigator:Q6AYL5 Uniprot:Q6AYL5
        Length = 424

 Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 31/103 (30%), Positives = 54/103 (52%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00034, P = 0.00034
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>UNIPROTKB|G3MZ94 [details] [associations]
            symbol:PABPC1L2A "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13126
            GeneTree:ENSGT00640000091232 CTD:340529 OMA:DSANKVY GeneID:521086
            KEGG:bta:521086 EMBL:DAAA02072607 RefSeq:XP_003588203.1
            Ensembl:ENSBTAT00000064260 Uniprot:G3MZ94
        Length = 200

 Score = 111 (44.1 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 28/100 (28%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI++ R+K T  S GY +V +     A++ L++
Sbjct:     3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    63 LNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NVFIKNL 97


>UNIPROTKB|Q5JQF8 [details] [associations]
            symbol:PABPC1L2A "Polyadenylate-binding protein 1-like 2"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:CH471104 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K13126
            HOGENOM:HOG000217922 HSSP:P11940 EMBL:AL662864 EMBL:BC041956
            EMBL:BC136492 IPI:IPI00217142 RefSeq:NP_001012995.1
            RefSeq:NP_001035971.1 UniGene:Hs.450320 UniGene:Hs.567854
            ProteinModelPortal:Q5JQF8 SMR:Q5JQF8 PhosphoSite:Q5JQF8
            PaxDb:Q5JQF8 PRIDE:Q5JQF8 Ensembl:ENST00000373519
            Ensembl:ENST00000373521 Ensembl:ENST00000453389
            Ensembl:ENST00000538388 GeneID:340529 GeneID:645974 KEGG:hsa:340529
            KEGG:hsa:645974 UCSC:uc004ebf.3 CTD:340529 CTD:645974
            GeneCards:GC0XM072297 GeneCards:GC0XP072223 H-InvDB:HIX0056425
            HGNC:HGNC:27989 HGNC:HGNC:31852 HPA:HPA041573 neXtProt:NX_Q5JQF8
            PharmGKB:PA162398594 InParanoid:Q5JQF8 OMA:RIMYSHC
            OrthoDB:EOG4QVCCZ NextBio:97904 Bgee:Q5JQF8 CleanEx:HS_PABPC1L2A
            CleanEx:HS_PABPC1L2B Genevestigator:Q5JQF8 Uniprot:Q5JQF8
        Length = 200

 Score = 111 (44.1 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 28/100 (28%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI++ R+K T  S GY +V +     A++ L++
Sbjct:     3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    63 LNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NVFIKNL 97


>UNIPROTKB|F1RPL9 [details] [associations]
            symbol:LOC100623240 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13126
            GeneTree:ENSGT00640000091232 EMBL:FP236342 RefSeq:XP_003135232.1
            RefSeq:XP_003360416.1 Ensembl:ENSSSCT00000023519
            Ensembl:ENSSSCT00000025081 GeneID:100525442 GeneID:100623240
            KEGG:ssc:100525442 KEGG:ssc:100623240 OMA:DSANKVY Uniprot:F1RPL9
        Length = 200

 Score = 111 (44.1 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 28/100 (28%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI++ R+K T  S GY +V +     A++ L++
Sbjct:     3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 62

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    63 LNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NVFIKNL 97


>CGD|CAL0004726 [details] [associations]
            symbol:orf19.7368 species:5476 "Candida albicans" [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0043488 "regulation of mRNA
            stability" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            CGD:CAL0004726 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AACQ01000066 eggNOG:COG0724 HOGENOM:HOG000206748 KO:K13201
            RefSeq:XP_716609.1 ProteinModelPortal:Q5A4G6 STRING:Q5A4G6
            GeneID:3641737 KEGG:cal:CaO19.7368 Uniprot:Q5A4G6
        Length = 510

 Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 34/116 (29%), Positives = 61/116 (52%)

Query:    88 GGGE--NKTIWVGDLHHWMDENYLHSCFASTGE-IASIKVIRNK-QTGLSEGYGFVEFFT 143
             GG E  NK ++VG+L     E  +   F+  G  + +IK++ +K + G +  Y F+E+ T
Sbjct:    72 GGREVSNKILYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFN--YAFIEYDT 129

Query:   144 HATAEKVLQSYTSILMPNTDQPFRLNWATFST---GDKRSDNGPDLSIFVGDLAAD 196
             +  A+  L +    L+ + +   ++NWA  S    G+  +   P  +IFVGDL+ +
Sbjct:   130 NEVADMALNTLNGRLVDDVE--IKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPE 183

 Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
 Identities = 25/78 (32%), Positives = 39/78 (50%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VGDL   +++  L + F+    +    V+ + QT  S GYGFV F   + AE  LQ+ 
Sbjct:   175 IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTM 234

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWA+
Sbjct:   235 NGEWL--CGRAIRCNWAS 250


>TAIR|locus:2049721 [details] [associations]
            symbol:AT2G37220 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009409
            "response to cold" evidence=IEP;RCA] [GO:0010319 "stromule"
            evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=IEP] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
            incompatible interaction" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0042742 "defense
            response to bacterium" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0008266 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AC005896
            GO:GO:0030529 GO:GO:0009535 GO:GO:0010319 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AC006260 KO:K11294 EMBL:AF370167
            EMBL:AY048251 EMBL:AY059129 IPI:IPI00540246 PIR:A84790
            RefSeq:NP_181259.1 UniGene:At.25300 ProteinModelPortal:Q9ZUU4
            SMR:Q9ZUU4 IntAct:Q9ZUU4 STRING:Q9ZUU4 SWISS-2DPAGE:Q9ZUU4
            PaxDb:Q9ZUU4 PRIDE:Q9ZUU4 ProMEX:Q9ZUU4 EnsemblPlants:AT2G37220.1
            GeneID:818299 KEGG:ath:AT2G37220 GeneFarm:4058 TAIR:At2g37220
            InParanoid:Q9ZUU4 OMA:PFNVDSA PhylomeDB:Q9ZUU4
            ProtClustDB:CLSN2684922 Genevestigator:Q9ZUU4 GermOnline:AT2G37220
            Uniprot:Q9ZUU4
        Length = 289

 Score = 115 (45.5 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GSG G    ++VG+L   +D+  L S F+  G++   +VI ++ +G S+G+GFV + +  
Sbjct:   197 GSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQ 256

Query:   146 TAEKVLQS 153
               +  ++S
Sbjct:   257 EVQNAIKS 264

 Score = 95 (38.5 bits), Expect = 0.00030, P = 0.00030
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VG+L   +D   L   F S G +  ++VI +K TG S G+GFV   + +  E   Q +
Sbjct:    93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152

Query:   155 TSILMPNTDQPFRLN 169
                 +    +P R+N
Sbjct:   153 NGYELDG--RPLRVN 165


>UNIPROTKB|F1P368 [details] [associations]
            symbol:DAZL "Deleted in azoospermia-like" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IEA] [GO:0008494
            "translation activator activity" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0045836 "positive
            regulation of meiosis" evidence=IEA] [GO:0045948 "positive
            regulation of translational initiation" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0008494 GO:GO:0003730 GO:GO:0005844 GO:GO:0045836
            GO:GO:0045948 GeneTree:ENSGT00530000063480 IPI:IPI00575414
            OMA:YVIPPAY EMBL:AADN02001034 Ensembl:ENSGALT00000018341
            Uniprot:F1P368
        Length = 289

 Score = 115 (45.5 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 22/64 (34%), Positives = 40/64 (62%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   M+E  + S F   G +  +K+I ++ TG+S+GYGFV F  +   +K+++S
Sbjct:    37 TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVES 95

Query:   154 YTSI 157
               S+
Sbjct:    96 QISV 99


>UNIPROTKB|Q804A9 [details] [associations]
            symbol:DAZL "Deleted in azoospermia-like" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0048477 "oogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0005737
            GO:GO:0030154 GO:GO:0006417 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0048477 GO:GO:0007283 GO:GO:0003723 eggNOG:NOG260394
            OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573 EMBL:AY211387
            IPI:IPI00575414 RefSeq:NP_989549.1 UniGene:Gga.5133
            ProteinModelPortal:Q804A9 STRING:Q804A9 GeneID:374054
            KEGG:gga:374054 HOGENOM:HOG000246400 InParanoid:Q804A9
            NextBio:20813576 Uniprot:Q804A9
        Length = 289

 Score = 115 (45.5 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 22/64 (34%), Positives = 40/64 (62%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   M+E  + S F   G +  +K+I ++ TG+S+GYGFV F  +   +K+++S
Sbjct:    37 TVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVES 95

Query:   154 YTSI 157
               S+
Sbjct:    96 QISV 99


>UNIPROTKB|Q6DEY7 [details] [associations]
            symbol:epabp "Embryonic polyadenylate-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0008143 "poly(A) RNA binding"
            evidence=ISS] [GO:0031370 "eukaryotic initiation factor 4G binding"
            evidence=ISS] [GO:0043009 "chordate embryonic development"
            evidence=ISS] [GO:0043621 "protein self-association" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0043621 GO:GO:0048255 GO:GO:0043009
            eggNOG:COG0724 GO:GO:0060212 GO:GO:0008143 HOVERGEN:HBG002295
            KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GO:GO:0031370 EMBL:BC076956 RefSeq:NP_001005062.1 UniGene:Str.8393
            ProteinModelPortal:Q6DEY7 SMR:Q6DEY7 STRING:Q6DEY7 PRIDE:Q6DEY7
            GeneID:448615 KEGG:xtr:448615 CTD:80336 Xenbase:XB-GENE-5742459
            HOGENOM:HOG000217922 InParanoid:Q6DEY7 OrthoDB:EOG4K6G3V
            Uniprot:Q6DEY7
        Length = 629

 Score = 120 (47.3 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 31/100 (31%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+    G ++S  G   ++F+ +L
Sbjct:    72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNL 106


>UNIPROTKB|D4A7H6 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00192584 ProteinModelPortal:D4A7H6
            SMR:D4A7H6 Ensembl:ENSRNOT00000009035 ArrayExpress:D4A7H6
            Uniprot:D4A7H6
        Length = 346

 Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|G3MY63 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00530000063480 EMBL:DAAA02005516 EMBL:DAAA02005517
            EMBL:DAAA02005518 Ensembl:ENSBTAT00000065390 Uniprot:G3MY63
        Length = 271

 Score = 114 (45.2 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGFV F T   A+K+LQ
Sbjct:    47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFVTFETQEDAQKILQ 103


>UNIPROTKB|G3N220 [details] [associations]
            symbol:G3N220 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GO:GO:0071013 GeneTree:ENSGT00700000104376 EMBL:DAAA02027300
            Ensembl:ENSBTAT00000063435 OMA:GWEDRSH Uniprot:G3N220
        Length = 310

 Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 31/93 (33%), Positives = 48/93 (51%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K I+VG +    +E  L  CF + G+I +I+V+ ++Q+G   G  FV F  H T +K V+
Sbjct:    57 KKIFVGGIKEDTEEYNLRDCFENYGKIETIEVMEDRQSGKKRGCAFVTFDDHDTVDKIVV 116

Query:   152 QSYTSILMPNTDQPFRLNWATF-STGDKRSDNG 183
             Q Y +I   N +    L+     S G +R   G
Sbjct:   117 QKYHTINGHNCEVKKALSKQEMQSAGSQRGRGG 149


>UNIPROTKB|Q12926 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0006355 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:CH471071 GO:GO:0003730 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            EMBL:U12431 EMBL:U29943 EMBL:AB209294 EMBL:AL161628 EMBL:AL445623
            EMBL:BC030692 IPI:IPI00030250 IPI:IPI00219967 PIR:I38726 PIR:I39077
            RefSeq:NP_001164666.1 RefSeq:NP_001164668.1 RefSeq:NP_004423.2
            UniGene:Hs.166109 ProteinModelPortal:Q12926 SMR:Q12926
            STRING:Q12926 PhosphoSite:Q12926 DMDM:93141258 PaxDb:Q12926
            PRIDE:Q12926 DNASU:1993 Ensembl:ENST00000223951
            Ensembl:ENST00000380110 Ensembl:ENST00000380117
            Ensembl:ENST00000397312 Ensembl:ENST00000544538 GeneID:1993
            KEGG:hsa:1993 UCSC:uc003zps.3 UCSC:uc003zpu.3 CTD:1993
            GeneCards:GC09M023690 HGNC:HGNC:3313 HPA:CAB022222 MIM:601673
            neXtProt:NX_Q12926 PharmGKB:PA27741 InParanoid:Q12926 KO:K13208
            OrthoDB:EOG4JHCFV PhylomeDB:Q12926 GenomeRNAi:1993 NextBio:8059
            ArrayExpress:Q12926 Bgee:Q12926 CleanEx:HS_ELAVL2
            Genevestigator:Q12926 GermOnline:ENSG00000107105 Uniprot:Q12926
        Length = 359

 Score = 116 (45.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>MGI|MGI:1100887 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1100887 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 CTD:1993 KO:K13208 EMBL:U29088
            IPI:IPI00121676 PIR:JC6057 RefSeq:NP_034616.1 UniGene:Mm.318042
            ProteinModelPortal:Q60899 SMR:Q60899 STRING:Q60899
            PhosphoSite:Q60899 PaxDb:Q60899 PRIDE:Q60899
            Ensembl:ENSMUST00000008633 GeneID:15569 KEGG:mmu:15569
            InParanoid:Q60899 NextBio:288546 Bgee:Q60899 Genevestigator:Q60899
            GermOnline:ENSMUSG00000008489 Uniprot:Q60899
        Length = 360

 Score = 116 (45.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|I3LPP8 [details] [associations]
            symbol:RBM23 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 OMA:VTERLDG TIGRFAMs:TIGR01622
            GeneTree:ENSGT00690000102089 Ensembl:ENSSSCT00000022566
            Uniprot:I3LPP8
        Length = 423

 Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 31/109 (28%), Positives = 51/109 (46%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             G G    ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F     A
Sbjct:   249 GTGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECA 308

Query:   148 EKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              + L+      +    +P R+   T     +R D   D++   GD   D
Sbjct:   309 RRALEQLNGFELAG--RPMRIGHVT-----ERLDGSTDITFPDGDQELD 350


>UNIPROTKB|Q76CY5 [details] [associations]
            symbol:dazl "Deleted in azoospermia-like" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007281
            "germ cell development" evidence=ISS] [GO:0008354 "germ cell
            migration" evidence=ISS] [GO:0008494 "translation activator
            activity" evidence=ISS] [GO:0032019 "mitochondrial cloud"
            evidence=ISS] [GO:0045495 "pole plasm" evidence=IDA] [GO:0045948
            "positive regulation of translational initiation" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007275 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0048477 GO:GO:0007283 GO:GO:0003723 GO:GO:0008494
            GO:GO:0007281 eggNOG:NOG260394 GO:GO:0045948
            GeneTree:ENSGT00530000063480 GO:GO:0045495 HSSP:P09651
            GO:GO:0008354 OrthoDB:EOG4T783S CTD:1618 HOVERGEN:HBG000573
            GO:GO:0032019 HOGENOM:HOG000246400 OMA:YVIPPAY EMBL:AB109328
            EMBL:BC067947 RefSeq:NP_989079.1 UniGene:Str.6165
            ProteinModelPortal:Q76CY5 STRING:Q76CY5 Ensembl:ENSXETT00000053944
            GeneID:394676 KEGG:xtr:394676 Xenbase:XB-GENE-1006218
            InParanoid:Q76CY5 Bgee:Q76CY5 Uniprot:Q76CY5
        Length = 286

 Score = 114 (45.2 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 21/60 (35%), Positives = 39/60 (65%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  + + F   G++  +K+I ++ TG+S+GYGFV F+     +K+++S
Sbjct:    31 TVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDR-TGVSKGYGFVSFYDEVDVQKIVKS 89


>UNIPROTKB|Q6GR16 [details] [associations]
            symbol:epabp-b "Embryonic polyadenylate-binding protein B"
            species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0031370
            "eukaryotic initiation factor 4G binding" evidence=ISS] [GO:0043009
            "chordate embryonic development" evidence=ISS] [GO:0043621 "protein
            self-association" evidence=ISS] [GO:0048255 "mRNA stabilization"
            evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0043621 GO:GO:0048255 GO:GO:0043009 GO:GO:0060212
            GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 EMBL:BC071118
            RefSeq:NP_001085351.1 UniGene:Xl.3974 ProteinModelPortal:Q6GR16
            SMR:Q6GR16 PRIDE:Q6GR16 GeneID:443777 KEGG:xla:443777 CTD:443777
            Xenbase:XB-GENE-6251876 GO:GO:0031370 Uniprot:Q6GR16
        Length = 629

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             ++++GDLH  + E  L+  F+  G I SI+V R+  T  S GY ++ F   A AE+ L +
Sbjct:    12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+    G ++S  G   ++F+ +L
Sbjct:    72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNL 106


>UNIPROTKB|C1JGV6 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:DAAA02005516 EMBL:DAAA02005517 EMBL:DAAA02005518 EMBL:FJ623266
            IPI:IPI00867153 UniGene:Bt.25777 Ensembl:ENSBTAT00000044801
            Uniprot:C1JGV6
        Length = 295

 Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGFV F T   A+K+LQ
Sbjct:    47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFVTFETQEDAQKILQ 103


>UNIPROTKB|F1P6I8 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:AAEX03017986 Ensembl:ENSCAFT00000037605 Uniprot:F1P6I8
        Length = 295

 Score = 114 (45.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGFV F T   A+K+LQ
Sbjct:    47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFVTFETQEDAQKILQ 103


>UNIPROTKB|B1AM49 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623
            UniGene:Hs.166109 HGNC:HGNC:3313 OMA:RAVENGP SMR:B1AM49
            Ensembl:ENST00000359598 Uniprot:B1AM49
        Length = 387

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    59 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 118

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   119 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 154


>UNIPROTKB|E1C240 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AADN02057847
            EMBL:AADN02057848 EMBL:AADN02057849 EMBL:AADN02057850
            IPI:IPI00584568 ProteinModelPortal:E1C240
            Ensembl:ENSGALT00000025475 Uniprot:E1C240
        Length = 388

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    59 SGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDP 118

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   119 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 154


>UNIPROTKB|G3N063 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:DAAA02022184
            EMBL:DAAA02022185 Ensembl:ENSBTAT00000065940 Uniprot:G3N063
        Length = 388

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    60 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 119

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   120 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 155


>UNIPROTKB|E2RI94 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AAEX03007909
            EMBL:AAEX03007910 EMBL:AAEX03007911 EMBL:AAEX03007912
            Ensembl:ENSCAFT00000002645 Uniprot:E2RI94
        Length = 388

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 34/98 (34%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT + V  L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    60 SGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 119

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   120 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 155


>DICTYBASE|DDB_G0276725 [details] [associations]
            symbol:DDB_G0276725 "putative RNA-binding protein"
            species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 dictyBase:DDB_G0276725 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000019 eggNOG:COG0724
            RefSeq:XP_643007.1 ProteinModelPortal:Q550X7
            EnsemblProtists:DDB0202911 GeneID:8620667 KEGG:ddi:DDB_G0276725
            InParanoid:Q550X7 Uniprot:Q550X7
        Length = 78

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 25/76 (32%), Positives = 41/76 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +I+VG L+  + +  L + F+  GEI S+  ++ K+TG+SEGY ++E+     A K +  
Sbjct:     5 SIYVGGLNSHISKEILKTKFSVYGEIQSLVFVKGKETGISEGYAYIEYNNKEDAVKAIDD 64

Query:   154 YTSILMPNTDQPFRLN 169
                      DQPF  N
Sbjct:    65 LN-------DQPFEGN 73


>UNIPROTKB|D4AAT0 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00392493 ProteinModelPortal:D4AAT0
            Ensembl:ENSRNOT00000035262 ArrayExpress:D4AAT0 Uniprot:D4AAT0
        Length = 351

 Score = 115 (45.5 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    36 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 95

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    96 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 131


>ZFIN|ZDB-GENE-990415-246 [details] [associations]
            symbol:elavl4 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 4 (Hu antigen D)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-246 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:CR931780 EMBL:CU467068
            EMBL:CU929301 IPI:IPI00920316 ProteinModelPortal:F1R133
            Ensembl:ENSDART00000134787 ArrayExpress:F1R133 Bgee:F1R133
            Uniprot:F1R133
        Length = 408

 Score = 116 (45.9 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 31/98 (31%), Positives = 49/98 (50%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G    ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    80 GGSNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 139

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   140 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 175


>MGI|MGI:1922638 [details] [associations]
            symbol:Boll "bol, boule-like (Drosophila)" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0007126
            "meiosis" evidence=ISO] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0045948 "positive regulation of translational initiation"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1922638 GO:GO:0007275
            GO:GO:0005737 GO:GO:0030154 GO:GO:0006417 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 CTD:66037
            eggNOG:NOG260394 HOGENOM:HOG000095250 HOVERGEN:HBG048761
            OrthoDB:EOG4MPHQQ EMBL:AF272859 EMBL:AK016125 EMBL:BY103870
            IPI:IPI00403643 IPI:IPI00886395 RefSeq:NP_001106838.1
            RefSeq:NP_083543.2 UniGene:Mm.483408 ProteinModelPortal:Q924M5
            SMR:Q924M5 STRING:Q924M5 PhosphoSite:Q924M5 PRIDE:Q924M5
            DNASU:75388 Ensembl:ENSMUST00000159398 GeneID:75388 KEGG:mmu:75388
            UCSC:uc007bal.1 UCSC:uc007bam.1 GeneTree:ENSGT00530000063480
            InParanoid:Q924M5 NextBio:342892 Bgee:Q924M5 CleanEx:MM_BOLL
            Genevestigator:Q924M5 GermOnline:ENSMUSG00000025977 Uniprot:Q924M5
        Length = 281

 Score = 113 (44.8 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGF+ F T   A+K+LQ
Sbjct:    35 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFITFETQEDAQKILQ 91


>UNIPROTKB|A2VDK5 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            OMA:SNSRNCP EMBL:DAAA02008922 EMBL:DAAA02008923 EMBL:BC133283
            IPI:IPI00729244 RefSeq:NP_001075075.1 UniGene:Bt.26853 SMR:A2VDK5
            STRING:A2VDK5 Ensembl:ENSBTAT00000028031 GeneID:535408
            KEGG:bta:535408 InParanoid:A2VDK5 NextBio:20876736 Uniprot:A2VDK5
        Length = 366

 Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    38 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 97

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    98 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 133


>UNIPROTKB|J9PAL3 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1996 EMBL:AAEX03009733
            RefSeq:XP_859918.1 ProteinModelPortal:J9PAL3
            Ensembl:ENSCAFT00000045412 GeneID:475361 KEGG:cfa:475361
            Uniprot:J9PAL3
        Length = 366

 Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    38 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 97

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    98 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 133


>UNIPROTKB|D4A964 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1595845 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00949247 Ensembl:ENSRNOT00000066938 Uniprot:D4A964
        Length = 368

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00027, P = 0.00027
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>UNIPROTKB|P0CB38 [details] [associations]
            symbol:PABPC4L "Polyadenylate-binding protein 4-like"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01628 EMBL:AC015631
            EMBL:BX648831 IPI:IPI00885166 UniGene:Hs.49889
            ProteinModelPortal:P0CB38 SMR:P0CB38 PhosphoSite:P0CB38
            DMDM:259515737 PaxDb:P0CB38 PRIDE:P0CB38 Ensembl:ENST00000421491
            UCSC:uc010ioe.3 GeneCards:GC04M135117 HGNC:HGNC:31955
            neXtProt:NX_P0CB38 eggNOG:NOG246493 OrthoDB:EOG4M398T NextBio:83098
            Bgee:P0CB38 Genevestigator:P0CB38 Uniprot:P0CB38
        Length = 370

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E+ L   F++ G + SI++ R++ T  S GY +V F   A A+K L +
Sbjct:    11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 70

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +  RL W+      +RS  G   ++F+ +L
Sbjct:    71 MNFDIIKG--KSIRLMWSQRDAYLRRSGIG---NVFIKNL 105


>UNIPROTKB|F1LQ36 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1595845 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            GO:GO:0017145 GeneTree:ENSGT00680000099967 IPI:IPI00555194
            Ensembl:ENSRNOT00000027463 Uniprot:F1LQ36
        Length = 371

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00028, P = 0.00028
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>UNIPROTKB|F1NLH0 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:SNSRNCP
            EMBL:AADN02012596 IPI:IPI00594347 ProteinModelPortal:F1NLH0
            Ensembl:ENSGALT00000017146 Uniprot:F1NLH0
        Length = 371

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    43 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 102

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   103 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 138


>UNIPROTKB|E9PEG6 [details] [associations]
            symbol:DAZ1 "Deleted in azoospermia protein 1" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:2682
            EMBL:AC053490 EMBL:AC010088 IPI:IPI00943033
            ProteinModelPortal:E9PEG6 SMR:E9PEG6 Ensembl:ENST00000445837
            ArrayExpress:E9PEG6 Bgee:E9PEG6 Uniprot:E9PEG6
        Length = 287

 Score = 113 (44.8 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query:   104 MDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:     1 MDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 49


>RGD|1560027 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO;ISS] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996 OMA:SNSRNCP
            EMBL:S83320 IPI:IPI00560167 RefSeq:NP_001071119.1 UniGene:Rn.134702
            ProteinModelPortal:O09032 SMR:O09032 STRING:O09032
            PhosphoSite:O09032 GeneID:432358 KEGG:rno:432358 UCSC:RGD:1560027
            InParanoid:O09032 NextBio:696819 ArrayExpress:O09032
            Genevestigator:O09032 GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|O09032 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV
            CTD:1996 OMA:SNSRNCP EMBL:S83320 IPI:IPI00560167
            RefSeq:NP_001071119.1 UniGene:Rn.134702 ProteinModelPortal:O09032
            SMR:O09032 STRING:O09032 PhosphoSite:O09032 GeneID:432358
            KEGG:rno:432358 UCSC:RGD:1560027 InParanoid:O09032 NextBio:696819
            ArrayExpress:O09032 Genevestigator:O09032
            GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>DICTYBASE|DDB_G0274523 [details] [associations]
            symbol:DDB_G0274523 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0274523 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000012 eggNOG:COG0724
            RefSeq:XP_644081.1 ProteinModelPortal:Q86HL7 PRIDE:Q86HL7
            EnsemblProtists:DDB0233759 GeneID:8619510 KEGG:ddi:DDB_G0274523
            InParanoid:Q86HL7 OMA:QNNHHDP Uniprot:Q86HL7
        Length = 904

 Score = 120 (47.3 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 25/59 (42%), Positives = 42/59 (71%)

Query:    87 SGGGE--NKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFF 142
             SGGG+  N T ++V  L  ++D++YL   F+  G++ S++VI +K TG ++GYGFV+F+
Sbjct:   760 SGGGKHTNDTNLFVFHLPPFVDDSYLFQLFSQFGKLQSVRVITDKDTGENKGYGFVKFY 818


>UNIPROTKB|Q01085 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0006952
            "defense response" evidence=TAS] [GO:0005764 "lysosome"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006917 "induction of
            apoptosis" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0006915 GO:GO:0006952 GO:GO:0006917 GO:GO:0000166
            GO:GO:0008284 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0005764
            GO:GO:0003723 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:M96954 EMBL:AK290695
            EMBL:AK290984 IPI:IPI00005615 IPI:IPI00644708 PIR:A46174
            RefSeq:NP_001029097.1 RefSeq:NP_003243.1 UniGene:Hs.501203 PDB:1X4G
            PDB:2CQI PDB:2DH7 PDBsum:1X4G PDBsum:2CQI PDBsum:2DH7
            ProteinModelPortal:Q01085 SMR:Q01085 DIP:DIP-42425N IntAct:Q01085
            MINT:MINT-1203913 STRING:Q01085 PhosphoSite:Q01085 DMDM:267131
            PaxDb:Q01085 PRIDE:Q01085 Ensembl:ENST00000369093
            Ensembl:ENST00000436547 GeneID:7073 KEGG:hsa:7073 UCSC:uc001lei.1
            CTD:7073 GeneCards:GC10M121324 HGNC:HGNC:11804 MIM:603413
            neXtProt:NX_Q01085 PharmGKB:PA36513 OMA:EEVYNQS PhylomeDB:Q01085
            ChiTaRS:TIAL1 EvolutionaryTrace:Q01085 GenomeRNAi:7073
            NextBio:27661 ArrayExpress:Q01085 Bgee:Q01085 CleanEx:HS_TIAL1
            Genevestigator:Q01085 GermOnline:ENSG00000151923 Uniprot:Q01085
        Length = 375

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   159 GGQWLGG--RQIRTNWAT 174

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 31/107 (28%), Positives = 54/107 (50%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             G+ +T++VG+L   + E  +   F+  G   S K+I  + T  ++ Y FVEF+ H  A  
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI-TEHTS-NDPYCFVEFYEHRDAAA 63

Query:   150 VLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              L +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    64 ALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 107


>UNIPROTKB|F2Z4H8 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017145 "stem cell division" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IEA] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:NGSKQLR
            EMBL:DAAA02059399 IPI:IPI00707976 RefSeq:NP_001179985.1
            UniGene:Bt.15754 ProteinModelPortal:F2Z4H8
            Ensembl:ENSBTAT00000005331 GeneID:614540 KEGG:bta:614540
            NextBio:20899153 Uniprot:F2Z4H8
        Length = 380

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   159 GGQWLGG--RQIRTNWAT 174

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 31/107 (28%), Positives = 54/107 (50%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             G+ +T++VG+L   + E  +   F+  G   S K+I  + T  ++ Y FVEF+ H  A  
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMI-TEHTS-NDPYCFVEFYEHRDAAA 63

Query:   150 VLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              L +     +   +   ++NWAT  +  K+ D      +FVGDL+ +
Sbjct:    64 ALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLSPE 107


>UNIPROTKB|F1LRX3 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 IPI:IPI00808644
            Ensembl:ENSRNOT00000067007 ArrayExpress:F1LRX3 Uniprot:F1LRX3
        Length = 380

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    38 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 97

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    98 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 133


>FB|FBgn0010263 [details] [associations]
            symbol:Rbp9 "RNA-binding protein 9" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0007293
            "germarium-derived egg chamber formation" evidence=TAS] [GO:0005634
            "nucleus" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0036093 "germ cell proliferation"
            evidence=IMP] [GO:0060856 "establishment of blood-brain barrier"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0007293 TIGRFAMs:TIGR01661
            HSSP:P26378 GO:GO:0060856 FlyBase:FBgn0010263 EMBL:S55886
            ProteinModelPortal:Q26293 SMR:Q26293 STRING:Q26293 PRIDE:Q26293
            InParanoid:Q26293 ArrayExpress:Q26293 Bgee:Q26293 Uniprot:Q26293
        Length = 444

 Score = 116 (45.9 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 25/65 (38%), Positives = 36/65 (55%)

Query:    97 VGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSYTS 156
             V  L   M ++ + S F S GE+ S K+IR+K TG S GYGFV +     AEK + +   
Sbjct:   114 VNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNG 173

Query:   157 ILMPN 161
             + + N
Sbjct:   174 LRLQN 178


>UNIPROTKB|G3MYW4 [details] [associations]
            symbol:PABPC1L2A "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13126
            GeneTree:ENSGT00640000091232 CTD:340529 EMBL:DAAA02072604
            RefSeq:XP_002700050.1 RefSeq:XP_003584787.1 RefSeq:XP_599343.3
            ProteinModelPortal:G3MYW4 Ensembl:ENSBTAT00000066058 GeneID:521086
            GeneID:784438 KEGG:bta:521086 KEGG:bta:784438 OMA:ILSIRLC
            NextBio:20873237 Uniprot:G3MYW4
        Length = 200

 Score = 109 (43.4 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 28/100 (28%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI++ R+K T  S GY +V +     A++ L++
Sbjct:     3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 62

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    63 LNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NVFIKNL 97


>UNIPROTKB|F1P856 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:SNSRNCP EMBL:AAEX03009733
            Ensembl:ENSCAFT00000006315 Uniprot:F1P856
        Length = 382

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    54 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 113

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   114 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 149


>RGD|1559527 [details] [associations]
            symbol:Boll "bol, boule-like (Drosophila)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0007126 "meiosis"
            evidence=IEA;ISO] [GO:0008494 "translation activator activity"
            evidence=IEA;ISO] [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA;ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1559527
            GO:GO:0007126 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0008494 CTD:66037 OrthoDB:EOG4MPHQQ GO:GO:0045948
            GeneTree:ENSGT00530000063480 EMBL:CH473965 EMBL:AC103419
            EMBL:AC122091 IPI:IPI00884580 RefSeq:NP_001106841.1
            RefSeq:XP_003750748.1 UniGene:Rn.145717 Ensembl:ENSRNOT00000021299
            GeneID:100911373 GeneID:501143 KEGG:rno:100911373 KEGG:rno:501143
            UCSC:RGD:1559527 NextBio:708414 Uniprot:D4ACT7
        Length = 293

 Score = 113 (44.8 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGF+ F T   A+K+LQ
Sbjct:    47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFITFETQEDAQKILQ 103


>ZFIN|ZDB-GENE-030131-3238 [details] [associations]
            symbol:pabpc1a "poly A binding protein,
            cytoplasmic 1 a" species:7955 "Danio rerio" [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IMP] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 ZFIN:ZDB-GENE-030131-3238 GO:GO:0007507
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 OrthoDB:EOG40ZQX5
            EMBL:BC099992 IPI:IPI00485280 RefSeq:NP_001026846.1
            UniGene:Dr.24504 ProteinModelPortal:Q499B6 SMR:Q499B6 STRING:Q499B6
            GeneID:606498 KEGG:dre:606498 CTD:606498 InParanoid:Q499B6
            NextBio:20892436 ArrayExpress:Q499B6 Uniprot:Q499B6
        Length = 634

 Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
 Identities = 23/65 (35%), Positives = 39/65 (60%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F TH  AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETHEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|F1LRL1 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 TIGRFAMs:TIGR01661 IPI:IPI00763452
            Ensembl:ENSRNOT00000064277 ArrayExpress:F1LRL1 Uniprot:F1LRL1
        Length = 384

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    42 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 101

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   102 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 137


>MGI|MGI:107427 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4 (Hu antigen D)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:107427 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 EMBL:AL627425 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            EMBL:D31953 EMBL:AF041341 IPI:IPI00229977 IPI:IPI00466120
            PIR:JC2298 RefSeq:NP_034618.2 UniGene:Mm.3970
            ProteinModelPortal:Q61701 SMR:Q61701 STRING:Q61701
            PhosphoSite:Q61701 PaxDb:Q61701 PRIDE:Q61701
            Ensembl:ENSMUST00000106597 GeneID:15572 KEGG:mmu:15572
            InParanoid:A2A9R7 OMA:SNSRNCP NextBio:288560 Bgee:Q61701
            Genevestigator:Q61701 GermOnline:ENSMUSG00000028546 Uniprot:Q61701
        Length = 385

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    43 GAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 102

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   103 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 138


>UNIPROTKB|F1NY49 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00575679 Ensembl:ENSGALT00000015349 ArrayExpress:F1NY49
            Uniprot:F1NY49
        Length = 388

 Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   175 GGQWLGG--RQIRTNWAT 190

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     5 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 64

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    65 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 121

Query:   195 AD 196
              +
Sbjct:   122 PE 123


>UNIPROTKB|F1NS94 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00681845 Ensembl:ENSGALT00000029737 ArrayExpress:F1NS94
            Uniprot:F1NS94
        Length = 389

 Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>UNIPROTKB|E7ETJ9 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
            ChiTaRS:TIAL1 IPI:IPI00647436 ProteinModelPortal:E7ETJ9 SMR:E7ETJ9
            Ensembl:ENST00000412524 ArrayExpress:E7ETJ9 Bgee:E7ETJ9
            Uniprot:E7ETJ9
        Length = 132

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 151
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +
Sbjct:    60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAI 116


>TAIR|locus:2076096 [details] [associations]
            symbol:GRP4 "glycine-rich RNA-binding protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
            cell wall organization" evidence=RCA] [GO:0042545 "cell wall
            modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
            eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
            ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
            IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
            UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
            PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
            EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
            GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
            PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
        Length = 136

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 29/89 (32%), Positives = 44/89 (49%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VG L    D++ L   F S GE+    VI +++TG S G+GFV F    +A   ++  
Sbjct:    37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96

Query:   155 TSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                 + N  Q  R+N AT  +   RS  G
Sbjct:    97 DGKEL-NGRQ-IRVNLATERSSAPRSSFG 123


>UNIPROTKB|E2RA41 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0007281 "germ
            cell development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:AAEX03015584 EMBL:AAEX03015585 RefSeq:XP_852319.1
            ProteinModelPortal:E2RA41 SMR:E2RA41 Ensembl:ENSCAFT00000019370
            GeneID:477841 KEGG:cfa:477841 NextBio:20853261 Uniprot:E2RA41
        Length = 392

 Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>UNIPROTKB|F2Z5F9 [details] [associations]
            symbol:LOC100736782 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:CT826370 EMBL:CT867965 RefSeq:XP_003133244.1 UniGene:Ssc.56271
            ProteinModelPortal:F2Z5F9 SMR:F2Z5F9 Ensembl:ENSSSCT00000011686
            GeneID:100158186 KEGG:ssc:100158186 Uniprot:F2Z5F9
        Length = 392

 Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>MGI|MGI:107913 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IMP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0017145 "stem cell
            division" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:107913
            GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 ChiTaRS:TIAL1
            EMBL:U55861 IPI:IPI00108085 PIR:S72436 RefSeq:NP_033409.1
            UniGene:Mm.242072 ProteinModelPortal:P70318 SMR:P70318
            IntAct:P70318 STRING:P70318 PhosphoSite:P70318 PaxDb:P70318
            PRIDE:P70318 Ensembl:ENSMUST00000106226 GeneID:21843 KEGG:mmu:21843
            InParanoid:P70318 OMA:NGSKQLR NextBio:301310 Bgee:P70318
            Genevestigator:P70318 GermOnline:ENSMUSG00000030846 Uniprot:P70318
        Length = 392

 Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>RGD|1595845 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10116 "Rattus norvegicus" [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0007281 "germ cell development" evidence=ISO] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0017091
            "AU-rich element binding" evidence=ISO] [GO:0017145 "stem cell
            division" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1595845
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 EMBL:CH473956
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 IPI:IPI00555194
            EMBL:BC091409 RefSeq:NP_001013211.1 UniGene:Rn.162475 SMR:Q5BJN3
            STRING:Q5BJN3 GeneID:361655 KEGG:rno:361655 UCSC:RGD:1595845
            InParanoid:Q5BJN3 NextBio:677112 Genevestigator:Q5BJN3
            Uniprot:Q5BJN3
        Length = 392

 Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +    + S FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   176 GGQWLGG--RQIRTNWAT 191

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIR--------NKQTGLS-------E 134
             G+ +T++VG+L   + E  +   F+  G   S K+I         N   G S       +
Sbjct:     6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSND 65

Query:   135 GYGFVEFFTHATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLA 194
              Y FVEF+ H  A   L +     +   +   ++NWAT  +  K+ D      +FVGDL+
Sbjct:    66 PYCFVEFYEHRDAAAALAAMNGRKILGKE--VKVNWATTPSSQKK-DTSNHFHVFVGDLS 122

Query:   195 AD 196
              +
Sbjct:   123 PE 124


>UNIPROTKB|E2QXH4 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:AAEX03009384
            ProteinModelPortal:E2QXH4 Ensembl:ENSCAFT00000004613 Uniprot:E2QXH4
        Length = 301

 Score = 113 (44.8 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:    60 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 119

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   120 QKYHTI 125


>UNIPROTKB|F1M6S2 [details] [associations]
            symbol:F1M6S2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00782238
            ProteinModelPortal:F1M6S2 Ensembl:ENSRNOT00000030712 Uniprot:F1M6S2
        Length = 223

 Score = 110 (43.8 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             K I+VG +    +E  L   F   G+I  I+V+ ++Q+G   G+ FV F  H T +K++Q
Sbjct:   109 KKIFVGGIKEDTEEYNLRDYFEKYGKIEIIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQ 168

Query:   153 SYTSI 157
              Y +I
Sbjct:   169 KYHTI 173


>UNIPROTKB|F1NDD0 [details] [associations]
            symbol:F1NDD0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007126 "meiosis"
            evidence=IEA] [GO:0008494 "translation activator activity"
            evidence=IEA] [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:AADN02019816 EMBL:AADN02019817 IPI:IPI00575003
            ProteinModelPortal:F1NDD0 Ensembl:ENSGALT00000013174 Uniprot:F1NDD0
        Length = 307

 Score = 113 (44.8 bits), Expect = 3.6e-06, P = 3.6e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   FA  G +  +K++ N + G+S+GYGF+ F T   A+K+LQ
Sbjct:    41 IFVGGIDFKTNENDLRKFFAQYGCVREVKIV-NDRAGISKGYGFITFETQEDAQKILQ 97


>UNIPROTKB|F1LM82 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1310403 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662 Pfam:PF11627
            GeneTree:ENSGT00700000104376 IPI:IPI00923129
            Ensembl:ENSRNOT00000015325 ArrayExpress:F1LM82 Uniprot:F1LM82
        Length = 312

 Score = 113 (44.8 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   111 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 170

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   171 QKYHTI 176


>RGD|628611 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KTIWVGD-LHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT  + + L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|Q8CH84 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%)

Query:    87 SGGGEN-KTIWVGD-LHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             SG  E+ KT  + + L   M +  L S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    31 SGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 90

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    91 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 126


>UNIPROTKB|J3KTH5 [details] [associations]
            symbol:PABPC4L "Polyadenylate-binding protein 4-like"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 KO:K13126 TIGRFAMs:TIGR01628
            EMBL:AC015631 UniGene:Hs.49889 HGNC:HGNC:31955
            RefSeq:NP_001108206.2 ProteinModelPortal:J3KTH5
            Ensembl:ENST00000529122 GeneID:132430 KEGG:hsa:132430 CTD:132430
            Uniprot:J3KTH5
        Length = 428

 Score = 115 (45.5 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E+ L   F++ G + SI++ R++ T  S GY +V F   A A+K L +
Sbjct:    69 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDT 128

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +  RL W+      +RS  G   ++F+ +L
Sbjct:   129 MNFDIIKG--KSIRLMWSQRDAYLRRSGIG---NVFIKNL 163


>UNIPROTKB|E2QVA8 [details] [associations]
            symbol:RBM23 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01622 ProteinModelPortal:E2QVA8
            Ensembl:ENSCAFT00000017824 Uniprot:E2QVA8
        Length = 440

 Score = 115 (45.5 bits), Expect = 4.1e-06, P = 4.1e-06
 Identities = 32/111 (28%), Positives = 53/111 (47%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G+I +I ++++  TG S+GYGF+ F    
Sbjct:   259 GSSGPMR--LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSE 316

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDLAAD 196
              A + L+      +    +P R+   T     +R D G D++   G+   D
Sbjct:   317 CARRALEQLNGFELAG--RPMRVGHVT-----ERLDGGTDITFPDGEQELD 360


>UNIPROTKB|P20965 [details] [associations]
            symbol:pabpc1-a "Polyadenylate-binding protein 1-A"
            species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005844 "polysome" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031370 "eukaryotic
            initiation factor 4G binding" evidence=IPI] [GO:0043621 "protein
            self-association" evidence=IPI] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000166 GO:GO:0006412 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0005844 GO:GO:0060212
            GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 EMBL:M27072 EMBL:X57483
            EMBL:BC052100 PIR:A32323 RefSeq:NP_001080204.1 UniGene:Xl.35547
            ProteinModelPortal:P20965 SMR:P20965 PRIDE:P20965 GeneID:379896
            KEGG:xla:379896 CTD:379896 Xenbase:XB-GENE-963463 Uniprot:P20965
        Length = 633

 Score = 117 (46.2 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNL 106


>ZFIN|ZDB-GENE-050308-1 [details] [associations]
            symbol:pabpc1b "poly A binding protein, cytoplasmic 1
            b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 ZFIN:ZDB-GENE-050308-1 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:P19339 eggNOG:COG0724
            HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 HOGENOM:HOG000217922
            GeneTree:ENSGT00640000091232 EMBL:CU468682 EMBL:CU468824
            EMBL:BC059662 EMBL:BC063948 IPI:IPI00493464 RefSeq:NP_957176.1
            UniGene:Dr.99377 SMR:Q6P3L1 STRING:Q6P3L1
            Ensembl:ENSDART00000032474 GeneID:393856 KEGG:dre:393856 CTD:393856
            InParanoid:Q6P3L1 NextBio:20814840 Uniprot:Q6P3L1
        Length = 634

 Score = 117 (46.2 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--RPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>ZFIN|ZDB-GENE-040426-1547 [details] [associations]
            symbol:tial1 "TIA1 cytotoxic granule-associated
            RNA binding protein-like 1" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1547 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00680000099967 EMBL:BX530079
            IPI:IPI00920337 ProteinModelPortal:E9QJJ0
            Ensembl:ENSDART00000135321 ArrayExpress:E9QJJ0 Bgee:E9QJJ0
            Uniprot:E9QJJ0
        Length = 389

 Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VGDL   +  + + + FA  G+I+  +V+++  TG S+GYGFV F+    AE  +   
Sbjct:   117 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 176

Query:   155 TSILMPNTDQPFRLNWAT 172
                 +    +  R NWAT
Sbjct:   177 GGQWLGG--RQIRTNWAT 192


>UNIPROTKB|Q2HJ60 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9913 "Bos taurus" [GO:0030529 "ribonucleoprotein
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0097157 "pre-mRNA
            intronic binding" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0043047 "single-stranded
            telomeric DNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0030529 GO:GO:0097157 GO:GO:0048025
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000234442
            OrthoDB:EOG4HQDKF EMBL:BC113298 IPI:IPI00695201
            RefSeq:NP_001039440.1 UniGene:Bt.48137 ProteinModelPortal:Q2HJ60
            SMR:Q2HJ60 STRING:Q2HJ60 PRIDE:Q2HJ60 Ensembl:ENSBTAT00000007527
            GeneID:507564 KEGG:bta:507564 CTD:3181 GeneTree:ENSGT00700000104376
            KO:K13158 OMA:HYSARTS NextBio:20868121 Uniprot:Q2HJ60
        Length = 341

 Score = 113 (44.8 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   100 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 159

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   160 QKYHTI 165


>UNIPROTKB|Q5ZME1 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0043047 "single-stranded telomeric DNA binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0050658 "RNA transport"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0097157 GO:GO:0048025 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF CTD:3181
            GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS EMBL:AC140791
            EMBL:AJ719443 IPI:IPI00651336 RefSeq:NP_001026156.1
            UniGene:Gga.22131 SMR:Q5ZME1 IntAct:Q5ZME1 STRING:Q5ZME1
            Ensembl:ENSGALT00000017975 GeneID:420627 KEGG:gga:420627
            InParanoid:Q5ZME1 NextBio:20823513 Uniprot:Q5ZME1
        Length = 349

 Score = 113 (44.8 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   108 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 167

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   168 QKYHTI 173


>UNIPROTKB|F1SA35 [details] [associations]
            symbol:LOC100737421 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 EMBL:FP326688 RefSeq:XP_003480852.1
            Ensembl:ENSSSCT00000014862 GeneID:100737421 KEGG:ssc:100737421
            OMA:STFGNIV Uniprot:F1SA35
        Length = 349

 Score = 113 (44.8 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   112 KKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 171

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   172 QKYHTI 177


>ZFIN|ZDB-GENE-030131-2249 [details] [associations]
            symbol:hnrnpa0a "heterogeneous nuclear
            ribonucleoprotein A0a" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-2249
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4W6NX4
            EMBL:BC066672 IPI:IPI00995382 RefSeq:NP_997810.1 UniGene:Dr.75559
            ProteinModelPortal:Q6NYB0 SMR:Q6NYB0 STRING:Q6NYB0 PRIDE:Q6NYB0
            GeneID:323529 KEGG:dre:323529 CTD:323529 InParanoid:Q6NYB0
            NextBio:20808302 ArrayExpress:Q6NYB0 Bgee:Q6NYB0 Uniprot:Q6NYB0
        Length = 305

 Score = 112 (44.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 21/59 (35%), Positives = 37/59 (62%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVL 151
             K I++G L   ++E++L  CF+  G +   +VI +K+TG   G+GFV F  + +A+K +
Sbjct:   101 KKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAV 159


>UNIPROTKB|F1LNF1 [details] [associations]
            symbol:Hnrnpa2b1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310403
            GO:GO:0005730 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0071013 GO:GO:0050658 GO:GO:0043047
            GeneTree:ENSGT00700000104376 OMA:HYSARTS IPI:IPI00867934
            ProteinModelPortal:F1LNF1 Ensembl:ENSRNOT00000015152
            ArrayExpress:F1LNF1 Uniprot:F1LNF1
        Length = 352

 Score = 113 (44.8 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   111 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 170

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   171 QKYHTI 176


>UNIPROTKB|F1Q1K6 [details] [associations]
            symbol:HNRNPA2B1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 OMA:HYSARTS EMBL:AAEX03009384
            Ensembl:ENSCAFT00000004622 Uniprot:F1Q1K6
        Length = 353

 Score = 113 (44.8 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 171

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   172 QKYHTI 177


>UNIPROTKB|P22626 [details] [associations]
            symbol:HNRNPA2B1 "Heterogeneous nuclear ribonucleoproteins
            A2/B1" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0048025 "negative regulation of mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0097157 "pre-mRNA intronic
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0030529 "ribonucleoprotein
            complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC;TAS] [GO:0006397 "mRNA processing" evidence=IDA]
            [GO:0050658 "RNA transport" evidence=IDA] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
            Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0000398
            GO:GO:0071013 GO:GO:0050658 eggNOG:COG0724 GO:GO:0043047
            HOVERGEN:HBG002295 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            HPA:HPA001666 CTD:3181 KO:K13158 OMA:HYSARTS EMBL:M29064
            EMBL:M29065 EMBL:U09123 EMBL:U09120 EMBL:U09121 EMBL:U09122
            EMBL:D28877 EMBL:AK289429 IPI:IPI00396378 IPI:IPI00414696
            PIR:A56845 RefSeq:NP_002128.1 RefSeq:NP_112533.1 UniGene:Hs.487774
            PDB:1X4B PDBsum:1X4B ProteinModelPortal:P22626 SMR:P22626
            IntAct:P22626 MINT:MINT-4998934 STRING:P22626 PhosphoSite:P22626
            DMDM:133257 REPRODUCTION-2DPAGE:IPI00396378
            REPRODUCTION-2DPAGE:IPI00414696 REPRODUCTION-2DPAGE:P22626
            SWISS-2DPAGE:P22626 UCD-2DPAGE:P22626 PaxDb:P22626 PRIDE:P22626
            Ensembl:ENST00000354667 Ensembl:ENST00000356674
            Ensembl:ENST00000360787 GeneID:3181 KEGG:hsa:3181 UCSC:uc003sxr.4
            UCSC:uc003sxs.4 GeneCards:GC07M026229 HGNC:HGNC:5033 HPA:CAB012403
            MIM:600124 neXtProt:NX_P22626 PharmGKB:PA162391140 PhylomeDB:P22626
            ChiTaRS:HNRNPA2B1 EvolutionaryTrace:P22626 GenomeRNAi:3181
            NextBio:12622 PMAP-CutDB:P22626 Bgee:P22626 CleanEx:HS_HNRNPA2B1
            Genevestigator:P22626 GermOnline:ENSG00000122566 Uniprot:P22626
        Length = 353

 Score = 113 (44.8 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 171

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   172 QKYHTI 177


>MGI|MGI:104819 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein
            A2/B1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=ISO] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
            [GO:0043047 "single-stranded telomeric DNA binding" evidence=ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IMP;IDA] [GO:0050658 "RNA transport" evidence=ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:104819 GO:GO:0005737 GO:GO:0005654
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0097157 GO:GO:0050658 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0043047 HOVERGEN:HBG002295 OrthoDB:EOG4HQDKF
            CTD:3181 GeneTree:ENSGT00700000104376 KO:K13158 OMA:HYSARTS
            ChiTaRS:HNRNPA2B1 EMBL:AF406651 EMBL:AF452567 EMBL:AF073990
            EMBL:AF073993 EMBL:AK089012 EMBL:AK137214 EMBL:BC059107
            EMBL:BC141253 IPI:IPI00405058 IPI:IPI00622847 IPI:IPI00828488
            RefSeq:NP_058086.2 RefSeq:NP_872591.1 RefSeq:XP_001473875.2
            UniGene:Mm.155896 ProteinModelPortal:O88569 SMR:O88569
            IntAct:O88569 STRING:O88569 PhosphoSite:O88569
            REPRODUCTION-2DPAGE:IPI00405058 REPRODUCTION-2DPAGE:O88569
            SWISS-2DPAGE:O88569 PaxDb:O88569 PRIDE:O88569
            Ensembl:ENSMUST00000069949 Ensembl:ENSMUST00000090002
            Ensembl:ENSMUST00000114459 GeneID:100045191 GeneID:53379
            KEGG:mmu:100045191 KEGG:mmu:53379 UCSC:uc009bxm.1 UCSC:uc009bxn.1
            NextBio:458663 Bgee:O88569 CleanEx:MM_HNRNPA2B1
            Genevestigator:O88569 GermOnline:ENSMUSG00000004980 Uniprot:O88569
        Length = 353

 Score = 113 (44.8 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K VL
Sbjct:   112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 171

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   172 QKYHTI 177


>UNIPROTKB|F1NBB6 [details] [associations]
            symbol:LOC100859627 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR021662
            Pfam:PF11627 GeneTree:ENSGT00700000104376 EMBL:AADN02020007
            EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
            EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
            IPI:IPI00818847 Ensembl:ENSGALT00000029498 Uniprot:F1NBB6
        Length = 310

 Score = 112 (44.5 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 30/100 (30%), Positives = 48/100 (48%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K I+VG +    +E  L   F   G+I +I+V+ ++Q+G   G+ FV F  H T +K V+
Sbjct:   112 KKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVV 171

Query:   152 QSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVG 191
             Q Y +I   N +    L+     T   +   G     F+G
Sbjct:   172 QKYHTINGHNCEVKKALSKQEMQTASSQRGRGGGSGNFMG 211


>UNIPROTKB|B1APY9 [details] [associations]
            symbol:ELAVL4 "cDNA FLJ50619, highly similar to ELAV-like
            protein 4" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            UniGene:Hs.213050 HGNC:HGNC:3315 EMBL:AK298902 IPI:IPI00643012
            SMR:B1APY9 STRING:B1APY9 Ensembl:ENST00000371819 UCSC:uc009vyu.3
            Uniprot:B1APY9
        Length = 371

 Score = 113 (44.8 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    43 GATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 102

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   103 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 138


>ZFIN|ZDB-GENE-030131-5836 [details] [associations]
            symbol:pabpc1l "poly(A) binding protein,
            cytoplasmic 1-like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 ZFIN:ZDB-GENE-030131-5836 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628 CTD:80336
            HSSP:P11940 EMBL:BC044513 IPI:IPI00863260 RefSeq:NP_956133.1
            UniGene:Dr.14309 ProteinModelPortal:Q803E7 SMR:Q803E7 PRIDE:Q803E7
            GeneID:327625 KEGG:dre:327625 NextBio:20810113 ArrayExpress:Q803E7
            Bgee:Q803E7 Uniprot:Q803E7
        Length = 620

 Score = 116 (45.9 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 31/100 (31%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G+I SI+V R+  T  S GY ++ F   A AE  L +
Sbjct:    12 SLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPADAECALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+    G ++S  G   +IF+ ++
Sbjct:    72 MNYEVIKG--RPIRIMWSQRDPGLRKSGVG---NIFIKNM 106


>SGD|S000001128 [details] [associations]
            symbol:NAM8 "RNA binding protein, component of the U1 snRNP
            protein" species:4932 "Saccharomyces cerevisiae" [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA;IPI] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0071004 "U2-type prespliceosome" evidence=IDA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IPI] [GO:0005685 "U1
            snRNP" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IPI]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000243 "commitment complex"
            evidence=IPI] [GO:0006376 "mRNA splice site selection"
            evidence=IMP] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            SGD:S000001128 GO:GO:0005739 GO:GO:0000166 EMBL:BK006934
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000243 eggNOG:COG0724
            GO:GO:0048026 GO:GO:0006376 GO:GO:0071004 OrthoDB:EOG44BFB8
            EMBL:U00060 GO:GO:0005685 EMBL:X64763 EMBL:D11461 PIR:S46720
            RefSeq:NP_011954.1 ProteinModelPortal:Q00539 SMR:Q00539
            DIP:DIP-2749N IntAct:Q00539 MINT:MINT-612683 STRING:Q00539
            PaxDb:Q00539 PeptideAtlas:Q00539 EnsemblFungi:YHR086W GeneID:856486
            KEGG:sce:YHR086W CYGD:YHR086w GeneTree:ENSGT00510000047100
            HOGENOM:HOG000066109 OMA:MNTGMNT NextBio:982182
            Genevestigator:Q00539 GermOnline:YHR086W Uniprot:Q00539
        Length = 523

 Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 43/126 (34%), Positives = 69/126 (54%)

Query:    89 GGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKV-------IRN-KQTGL----SEGY 136
             G     +++GDL    D+N +   +AS GE A+I V       + N  ++ +    ++GY
Sbjct:    50 GTTGNQLYMGDLDPTWDKNTVRQIWASLGE-ANINVRMMWNNTLNNGSRSSMGPKNNQGY 108

Query:   137 GFVEF--FTHATAEKVLQSYTSILMPN-TDQPFRLNWAT--FSTGDKRSDN---GPDLSI 188
              FV+F   THA A  +L++   +L+PN  ++  +LNWAT  +S  +   +N   G + SI
Sbjct:   109 CFVDFPSSTHA-ANALLKN--GMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSI 165

Query:   189 FVGDLA 194
             FVGDLA
Sbjct:   166 FVGDLA 171

 Score = 94 (38.1 bits), Expect = 0.00096, P = 0.00096
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFAST-GEIASIKVIRNKQTGLSEGYGFVEFFTHATAE 148
             G N +I+VGDL   + E+ L   F +     +  K++ ++ TG+S+GYGFV+F T++  +
Sbjct:   160 GNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKF-TNSDEQ 218

Query:   149 KVLQS 153
             ++  S
Sbjct:   219 QLALS 223


>UNIPROTKB|P26378 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 EMBL:CH471059
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0003730
            eggNOG:COG0724 EMBL:AL645730 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 EMBL:M62843
            EMBL:AY033995 EMBL:AY033996 EMBL:AY033997 EMBL:AY033998
            EMBL:AK297338 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            EMBL:BC036071 IPI:IPI00395507 IPI:IPI00479625 IPI:IPI00607677
            IPI:IPI00644588 IPI:IPI00978372 PIR:A40348 RefSeq:NP_001138246.1
            RefSeq:NP_001138247.1 RefSeq:NP_001138248.1 RefSeq:NP_001138249.1
            RefSeq:NP_068771.2 UniGene:Hs.213050 PDB:1FXL PDB:1G2E PDBsum:1FXL
            PDBsum:1G2E ProteinModelPortal:P26378 SMR:P26378 IntAct:P26378
            MINT:MINT-1471928 STRING:P26378 PhosphoSite:P26378 DMDM:223590202
            PaxDb:P26378 PRIDE:P26378 Ensembl:ENST00000357083
            Ensembl:ENST00000371823 Ensembl:ENST00000371824
            Ensembl:ENST00000371827 Ensembl:ENST00000448907 GeneID:1996
            KEGG:hsa:1996 UCSC:uc001crz.3 UCSC:uc001csa.3 UCSC:uc001csb.2
            UCSC:uc001csc.3 CTD:1996 GeneCards:GC01P050513 HGNC:HGNC:3315
            HPA:CAB004442 MIM:168360 neXtProt:NX_P26378 PharmGKB:PA27743
            EvolutionaryTrace:P26378 GenomeRNAi:1996 NextBio:8073
            ArrayExpress:P26378 Bgee:P26378 CleanEx:HS_ELAVL4
            Genevestigator:P26378 GermOnline:ENSG00000162374 Uniprot:P26378
        Length = 380

 Score = 113 (44.8 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    38 GATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 97

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:    98 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 133


>RGD|1310759 [details] [associations]
            symbol:Pabpc2 "poly(A) binding protein, cytoplasmic 2"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 RGD:1310759
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            EMBL:CH473974 GeneTree:ENSGT00640000091232 IPI:IPI00200243
            RefSeq:NP_001099621.1 UniGene:Rn.127161 Ensembl:ENSRNOT00000019467
            GeneID:291615 KEGG:rno:291615 UCSC:RGD:1310759 CTD:18459
            OMA:VSEMNGR OrthoDB:EOG4BK55N NextBio:632859 Uniprot:D4A233
        Length = 630

 Score = 116 (45.9 bits), Expect = 5.3e-06, P = 5.3e-06
 Identities = 33/100 (33%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+S G I SI+V R+  T  S GY  V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      +RS  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRRSGVG---NVFIKNL 106


>UNIPROTKB|E1BWJ7 [details] [associations]
            symbol:PABPC1L "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 CTD:80336 GeneTree:ENSGT00640000091232
            EMBL:AADN02019326 EMBL:AADN02019327 IPI:IPI00570679
            RefSeq:XP_417367.2 ProteinModelPortal:E1BWJ7
            Ensembl:ENSGALT00000006565 GeneID:419189 KEGG:gga:419189
            OMA:QTISARV NextBio:20822287 Uniprot:E1BWJ7
        Length = 632

 Score = 116 (45.9 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  +  S GY ++ F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+    G ++S  G   ++F+ +L
Sbjct:    72 MNFEVIKG--RPVRIMWSQRDPGLRKSGVG---NVFIKNL 106

 Score = 99 (39.9 bits), Expect = 0.00036, P = 0.00036
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             G+   E   +++ +    MD+N L   F+  G+  S+KV+ +  TG S+G+GFV F  H 
Sbjct:   184 GARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMD-HTGRSKGFGFVNFEKHE 242

Query:   146 TAEKVL 151
              A+K +
Sbjct:   243 EAQKAV 248


>UNIPROTKB|B1APY8 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AL583843 EMBL:AL592182
            EMBL:AL731870 UniGene:Hs.213050 HGNC:HGNC:3315 OMA:SNSRNCP
            IPI:IPI00513758 SMR:B1APY8 STRING:B1APY8 Ensembl:ENST00000371821
            Uniprot:B1APY8
        Length = 385

 Score = 113 (44.8 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)

Query:    86 GSGGGENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTH 144
             G+   ++KT + V  L   M +    S F S GEI S K++R+K TG S GYGFV +   
Sbjct:    43 GATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDP 102

Query:   145 ATAEKVLQSYTSILMPNTDQPFRLNWATFSTGDKRSDN 182
               AEK + +   + +    +  ++++A  S+   R  N
Sbjct:   103 KDAEKAINTLNGLRLQT--KTIKVSYARPSSASIRDAN 138


>UNIPROTKB|F1SI86 [details] [associations]
            symbol:BOLL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045948 "positive regulation of translational
            initiation" evidence=IEA] [GO:0008494 "translation activator
            activity" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007126
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0008494
            GO:GO:0045948 GeneTree:ENSGT00530000063480 OMA:YQAPAQC
            EMBL:CU469305 Ensembl:ENSSSCT00000017510 Uniprot:F1SI86
        Length = 295

 Score = 111 (44.1 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +EN L   F+  G +  +K++ N + G+S+GYGFV F T   A+++LQ
Sbjct:    47 IFVGGIDFKTNENDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFVTFETQEDAQRILQ 103


>ZFIN|ZDB-GENE-020419-22 [details] [associations]
            symbol:sf3b4 "splicing factor 3b, subunit 4"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-020419-22 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295 EMBL:AY099515
            IPI:IPI00495328 UniGene:Dr.1505 ProteinModelPortal:Q8JGT1
            SMR:Q8JGT1 STRING:Q8JGT1 InParanoid:Q8JGT1 ArrayExpress:Q8JGT1
            Uniprot:Q8JGT1
        Length = 400

 Score = 113 (44.8 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 30/103 (29%), Positives = 53/103 (51%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++  ++VG L   + E  L   F   G + +  + +++ TG  +GYGFVEF +   A+  
Sbjct:    11 QDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P R+N A  S  +K  D G +  IF+G+L
Sbjct:    71 IKIMNMIKLYG--KPIRVNKA--SAHNKNLDVGAN--IFIGNL 107

 Score = 97 (39.2 bits), Expect = 0.00031, P = 0.00031
 Identities = 24/90 (26%), Positives = 48/90 (53%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASI-KVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             I++G+L   +DE  L+  F++ G I    K++R+  TG S+GY F+ F +   ++  +++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNG 183
                  + N  +P  +++A F    K   +G
Sbjct:   162 MNGQYLCN--RPITVSYA-FKKDSKGERHG 188


>ZFIN|ZDB-GENE-021231-4 [details] [associations]
            symbol:mki67ip "mki67 (FHA domain) interacting
            nucleolar phosphoprotein (human)" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0010923 "negative regulation
            of phosphatase activity" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-021231-4
            GO:GO:0007275 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0010923 CTD:84365 eggNOG:NOG244773
            GeneTree:ENSGT00390000011515 HOGENOM:HOG000242795
            HOVERGEN:HBG057796 KO:K14838 OMA:QVRKRIT OrthoDB:EOG4MKNGX
            InterPro:IPR021043 Pfam:PF12196 EMBL:AF506200 EMBL:BC071545
            IPI:IPI00502973 RefSeq:NP_775395.1 UniGene:Dr.76897
            ProteinModelPortal:Q8JIY8 SMR:Q8JIY8 STRING:Q8JIY8 PRIDE:Q8JIY8
            Ensembl:ENSDART00000059549 GeneID:317644 KEGG:dre:317644
            InParanoid:Q8JIY8 NextBio:20807127 Bgee:Q8JIY8 Uniprot:Q8JIY8
        Length = 269

 Score = 110 (43.8 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             ++VG L   + E  L S F   G++  ++V R+K+TG S+GYGFVEF     A+ V ++ 
Sbjct:    47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106

Query:   155 TSILM 159
              + LM
Sbjct:   107 NNYLM 111


>RGD|1310403 [details] [associations]
            symbol:Hnrnpa2b1 "heterogeneous nuclear ribonucleoprotein A2/B1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA;ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0043047
            "single-stranded telomeric DNA binding" evidence=IEA;ISO]
            [GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
            evidence=IEA;ISO] [GO:0050658 "RNA transport" evidence=IEA;ISO]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
            [GO:0097157 "pre-mRNA intronic binding" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310403 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0030529 GO:GO:0071013 GO:GO:0050658
            eggNOG:COG0724 GO:GO:0043047 HOGENOM:HOG000234442 OrthoDB:EOG4HQDKF
            CTD:3181 KO:K13158 EMBL:AB006815 EMBL:AB006816 EMBL:AB006817
            EMBL:AB006818 IPI:IPI00212969 IPI:IPI00867934 IPI:IPI00923129
            IPI:IPI00923135 RefSeq:NP_001098083.1 UniGene:Rn.231911
            ProteinModelPortal:A7VJC2 SMR:A7VJC2 STRING:A7VJC2 PRIDE:A7VJC2
            GeneID:362361 KEGG:rno:362361 UCSC:RGD:1310403 HOVERGEN:HBG108415
            InParanoid:A7VJC2 NextBio:679650 ArrayExpress:A7VJC2
            Genevestigator:A7VJC2 Uniprot:A7VJC2
        Length = 353

 Score = 112 (44.5 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 23/66 (34%), Positives = 40/66 (60%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV-L 151
             K ++VG +    +E++L   F   G+I +I++I ++Q+G   G+GFV F  H   +K+ L
Sbjct:   112 KKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFL 171

Query:   152 QSYTSI 157
             Q Y +I
Sbjct:   172 QKYHTI 177


>TAIR|locus:2159401 [details] [associations]
            symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
            "copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
            to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
            HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
            IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
            ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
            PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
            KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
            HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
            ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
        Length = 309

 Score = 111 (44.1 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 20/59 (33%), Positives = 35/59 (59%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++G + + MDE+ L   F   GE+   +VI +++TG S G+GFV F +   A   +Q+
Sbjct:    42 LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100


>UNIPROTKB|E2RQC8 [details] [associations]
            symbol:PABPC1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 EMBL:AAEX03008681
            ProteinModelPortal:E2RQC8 PRIDE:E2RQC8 Ensembl:ENSCAFT00000000885
            NextBio:20898275 Uniprot:E2RQC8
        Length = 596

 Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00069, P = 0.00069
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|B1ANR0 [details] [associations]
            symbol:PABPC4 "Polyadenylate-binding protein 4"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0000166
            EMBL:CH471059 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL365277
            HOVERGEN:HBG002295 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:AL845289
            UniGene:Hs.169900 HGNC:HGNC:8557 ChiTaRS:PABPC4 IPI:IPI00642944
            SMR:B1ANR0 STRING:B1ANR0 Ensembl:ENST00000372862 Uniprot:B1ANR0
        Length = 615

 Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|E1P5S2 [details] [associations]
            symbol:RBM39 "RNA-binding protein 39" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
            [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005813 EMBL:CH471077 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL357374 TIGRFAMs:TIGR01622
            UniGene:Hs.282901 HGNC:HGNC:15923 ChiTaRS:RBM39 IPI:IPI01015916
            SMR:E1P5S2 Ensembl:ENST00000407261 UCSC:uc002xed.3 Uniprot:E1P5S2
        Length = 373

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G I SI+++ + +TG S+GYGF+ F    
Sbjct:    88 GSAGPMR--LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 145

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFST 175
              A+K L+      +    +P ++   T  T
Sbjct:   146 CAKKALEQLNGFELAG--RPMKVGHVTERT 173


>UNIPROTKB|E1BZE6 [details] [associations]
            symbol:LOC100859627 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005730
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00700000104376 OMA:QGHDPKE EMBL:AADN02020007
            EMBL:AADN02020008 EMBL:AADN02020009 EMBL:AADN02020010
            EMBL:AADN02020011 EMBL:AADN02020012 EMBL:AADN02020013
            IPI:IPI00812068 ProteinModelPortal:E1BZE6
            Ensembl:ENSGALT00000038715 Uniprot:E1BZE6
        Length = 380

 Score = 112 (44.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 30/100 (30%), Positives = 48/100 (48%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK-VL 151
             K I+VG +    +E  L   F   G+I +I+V+ ++Q+G   G+ FV F  H T +K V+
Sbjct:   124 KKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVV 183

Query:   152 QSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVG 191
             Q Y +I   N +    L+     T   +   G     F+G
Sbjct:   184 QKYHTINGHNCEVKKALSKQEMQTASSQRGRGGGSGNFMG 223


>UNIPROTKB|E2R9I0 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0008266 "poly(U) RNA binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005634 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0010494 GO:GO:0008143 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 OMA:XVVCDEN
            EMBL:AAEX03009572 ProteinModelPortal:E2R9I0
            Ensembl:ENSCAFT00000004950 Uniprot:E2R9I0
        Length = 631

 Score = 115 (45.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|F1SV06 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005634
            GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010494
            GO:GO:0008143 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 OMA:XVVCDEN
            EMBL:CR956622 Ensembl:ENSSSCT00000004056 Uniprot:F1SV06
        Length = 631

 Score = 115 (45.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|D4AC14 [details] [associations]
            symbol:Pabpc4 "Protein Pabpc4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 EMBL:AC114512 IPI:IPI00204295 PRIDE:D4AC14
            Ensembl:ENSRNOT00000021045 ArrayExpress:D4AC14 Uniprot:D4AC14
        Length = 631

 Score = 115 (45.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|Q6IP09 [details] [associations]
            symbol:pabpc1-b "Polyadenylate-binding protein 1-B"
            species:8355 "Xenopus laevis" [GO:0005844 "polysome" evidence=ISS]
            [GO:0008143 "poly(A) RNA binding" evidence=ISS] [GO:0031370
            "eukaryotic initiation factor 4G binding" evidence=ISS] [GO:0043621
            "protein self-association" evidence=ISS] [GO:0048255 "mRNA
            stabilization" evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005737
            GO:GO:0006417 GO:GO:0000166 GO:GO:0006412 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0043621 GO:GO:0048255 GO:GO:0005844
            GO:GO:0060212 GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GO:GO:0031370 EMBL:BC072110 EMBL:BC108462 RefSeq:NP_001085069.1
            UniGene:Xl.60751 ProteinModelPortal:Q6IP09 SMR:Q6IP09 PRIDE:Q6IP09
            GeneID:432140 KEGG:xla:432140 CTD:432140 Xenbase:XB-GENE-6255999
            Uniprot:Q6IP09
        Length = 633

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106


>UNIPROTKB|P61286 [details] [associations]
            symbol:PABPC1 "Polyadenylate-binding protein 1"
            species:9913 "Bos taurus" [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:2000623 "negative regulation of
            nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
            [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008380
            "RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000184 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0071013
            GO:GO:0010494 GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            EMBL:AJ401269 EMBL:BC102365 IPI:IPI00705440 RefSeq:NP_776993.1
            UniGene:Bt.53579 ProteinModelPortal:P61286 SMR:P61286 PRIDE:P61286
            Ensembl:ENSBTAT00000064237 GeneID:282296 KEGG:bta:282296 CTD:26986
            GeneTree:ENSGT00640000091232 OMA:TITSAKX OrthoDB:EOG40ZQX5
            BindingDB:P61286 NextBio:20806097 GO:GO:2000623 Uniprot:P61286
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|J9P326 [details] [associations]
            symbol:PABPC1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 CTD:26986 GeneTree:ENSGT00640000091232
            OMA:TITSAKX EMBL:AAEX03008681 RefSeq:XP_856708.1
            ProteinModelPortal:J9P326 Ensembl:ENSCAFT00000042991 GeneID:612751
            KEGG:cfa:612751 Uniprot:J9P326
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|P11940 [details] [associations]
            symbol:PABPC1 "Polyadenylate-binding protein 1"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IDA;TAS]
            [GO:0006378 "mRNA polyadenylation" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IDA;TAS] [GO:0048255 "mRNA stabilization"
            evidence=TAS] [GO:0008494 "translation activator activity"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0030529
            "ribonucleoprotein complex" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:2000623 "negative
            regulation of nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IDA] [GO:0010494 "cytoplasmic
            stress granule" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=TAS] [GO:0000288
            "nuclear-transcribed mRNA catabolic process,
            deadenylation-dependent decay" evidence=TAS] [GO:0000289
            "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
            evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
            [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0044267 "cellular protein metabolic
            process" evidence=TAS] [GO:0045727 "positive regulation of
            translation" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
            Reactome:REACT_17015 InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005829 GO:GO:0000184 GO:GO:0000166 GO:GO:0006413
            Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0008494 GO:GO:0048255
            GO:GO:0000398 GO:GO:0071013 PDB:3KTR PDBsum:3KTR GO:GO:0010494
            eggNOG:COG0724 GO:GO:0000289 GO:GO:0008143 HOVERGEN:HBG002295
            Reactome:REACT_1762 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 PDB:3KUI PDBsum:3KUI
            PDB:2RQG PDB:2RQH PDBsum:2RQG PDBsum:2RQH PDB:3KUJ PDBsum:3KUJ
            PDB:4F02 PDBsum:4F02 PDB:3PTH PDBsum:3PTH PDB:3PKN PDBsum:3PKN
            CTD:26986 OMA:TITSAKX OrthoDB:EOG40ZQX5 GO:GO:2000623 EMBL:Y00345
            EMBL:U68104 EMBL:U68093 EMBL:U68094 EMBL:U68095 EMBL:U68097
            EMBL:U68098 EMBL:U68099 EMBL:U68100 EMBL:U68101 EMBL:U68102
            EMBL:U68103 EMBL:AP001205 EMBL:BC015958 EMBL:BC023520 EMBL:Z48501
            IPI:IPI00008524 IPI:IPI00410017 PIR:A93668 PIR:S52491
            RefSeq:NP_002559.2 UniGene:Hs.387804 PDB:1CVJ PDB:1G9L PDB:1JGN
            PDB:1JH4 PDB:2K8G PDB:2X04 PDB:3KTP PDB:3KUR PDB:3KUS PDB:3KUT
            PDB:4F25 PDB:4F26 PDBsum:1CVJ PDBsum:1G9L PDBsum:1JGN PDBsum:1JH4
            PDBsum:2K8G PDBsum:2X04 PDBsum:3KTP PDBsum:3KUR PDBsum:3KUS
            PDBsum:3KUT PDBsum:4F25 PDBsum:4F26 ProteinModelPortal:P11940
            SMR:P11940 DIP:DIP-31613N IntAct:P11940 MINT:MINT-96210
            STRING:P11940 PhosphoSite:P11940 DMDM:3183544 PaxDb:P11940
            PRIDE:P11940 DNASU:26986 Ensembl:ENST00000318607 GeneID:26986
            KEGG:hsa:26986 UCSC:uc003yjs.1 GeneCards:GC08M101715 HGNC:HGNC:8554
            HPA:CAB011536 HPA:HPA045423 MIM:604679 neXtProt:NX_P11940
            PharmGKB:PA32880 InParanoid:P11940 PhylomeDB:P11940
            BindingDB:P11940 ChEMBL:CHEMBL1293286 ChiTaRS:PABPC1
            EvolutionaryTrace:P11940 GenomeRNAi:26986 NextBio:49454
            PMAP-CutDB:P11940 ArrayExpress:P11940 Bgee:P11940 CleanEx:HS_PABPC1
            Genevestigator:P11940 GermOnline:ENSG00000070756 Uniprot:P11940
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|F2Z557 [details] [associations]
            symbol:PABPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 CTD:26986 GeneTree:ENSGT00640000091232
            EMBL:CU302394 RefSeq:XP_001927782.1 UniGene:Ssc.41568
            ProteinModelPortal:F2Z557 SMR:F2Z557 PRIDE:F2Z557
            Ensembl:ENSSSCT00000006652 GeneID:100153958 KEGG:ssc:100153958
            Uniprot:F2Z557
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>MGI|MGI:1349722 [details] [associations]
            symbol:Pabpc1 "poly(A) binding protein, cytoplasmic 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=ISO] [GO:0008143 "poly(A) RNA binding" evidence=ISO]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010494 "cytoplasmic
            stress granule" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:2000623 "negative regulation of
            nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            MGI:MGI:1349722 GO:GO:0000184 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0008143 EMBL:CH466541 HOVERGEN:HBG002295
            KO:K13126 Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 HSSP:P11940 CTD:26986
            GeneTree:ENSGT00640000091232 OMA:TITSAKX OrthoDB:EOG40ZQX5
            GO:GO:2000623 ChiTaRS:PABPC1 EMBL:X65553 EMBL:AK044829
            EMBL:AK133196 EMBL:AK159703 EMBL:AK159733 EMBL:AK160968
            EMBL:AK161123 EMBL:AK161671 EMBL:AK168466 EMBL:BC003870
            EMBL:BC011207 EMBL:BC023145 EMBL:BC046233 IPI:IPI00124287
            PIR:I48718 RefSeq:NP_032800.2 UniGene:Mm.371570
            ProteinModelPortal:P29341 SMR:P29341 DIP:DIP-32127N IntAct:P29341
            STRING:P29341 PhosphoSite:P29341 REPRODUCTION-2DPAGE:P29341
            PaxDb:P29341 PRIDE:P29341 Ensembl:ENSMUST00000001809 GeneID:18458
            KEGG:mmu:18458 InParanoid:Q99L36 NextBio:294152 Bgee:P29341
            CleanEx:MM_PABPC1 Genevestigator:P29341
            GermOnline:ENSMUSG00000022283 Uniprot:P29341
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>RGD|619838 [details] [associations]
            symbol:Pabpc1 "poly(A) binding protein, cytoplasmic 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] [GO:0003729 "mRNA
            binding" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008022 "protein C-terminus binding"
            evidence=ISO] [GO:0008143 "poly(A) RNA binding" evidence=ISO;ISS]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010494 "cytoplasmic
            stress granule" evidence=ISO;ISS] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO;ISS] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] [GO:2000623 "negative regulation of
            nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            RGD:619838 GO:GO:0000184 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0010494 eggNOG:COG0724
            GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 CTD:26986
            GeneTree:ENSGT00640000091232 OMA:TITSAKX OrthoDB:EOG40ZQX5
            GO:GO:2000623 EMBL:AJ298278 EMBL:BC083176 IPI:IPI00189074
            RefSeq:NP_599180.1 UniGene:Rn.127813 UniGene:Rn.29024
            ProteinModelPortal:Q9EPH8 SMR:Q9EPH8 IntAct:Q9EPH8
            MINT:MINT-4576919 STRING:Q9EPH8 PhosphoSite:Q9EPH8 PRIDE:Q9EPH8
            Ensembl:ENSRNOT00000012775 GeneID:171350 KEGG:rno:171350
            UCSC:RGD:619838 InParanoid:Q9EPH8 NextBio:622119
            Genevestigator:Q9EPH8 GermOnline:ENSRNOG00000008639 Uniprot:Q9EPH8
        Length = 636

 Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00075, P = 0.00075
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|F1LZZ2 [details] [associations]
            symbol:F1LZZ2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104376 IPI:IPI00556964
            Ensembl:ENSRNOT00000044311 OMA:KERREDT Uniprot:F1LZZ2
        Length = 294

 Score = 110 (43.8 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 22/63 (34%), Positives = 37/63 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VG +    +E  L   F   G+I +I+V+ ++Q+G   G+ FV F  H T +KV+Q Y
Sbjct:   130 IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDNHDTVDKVVQKY 189

Query:   155 TSI 157
              ++
Sbjct:   190 HTV 192


>UNIPROTKB|Q13310 [details] [associations]
            symbol:PABPC4 "Polyadenylate-binding protein 4"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0008143 "poly(A) RNA binding" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0010494
            "cytoplasmic stress granule" evidence=IDA] [GO:0017130 "poly(C) RNA
            binding" evidence=IDA] [GO:0006401 "RNA catabolic process"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0006412 "translation" evidence=TAS] [GO:0007596 "blood
            coagulation" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005634 GO:GO:0008266 GO:GO:0000166 EMBL:CH471059
            GO:GO:0006412 GO:GO:0007596 Gene3D:3.30.70.330 GO:GO:0006401
            GO:GO:0006396 GO:GO:0010494 EMBL:AL365277 eggNOG:COG0724
            GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 HOGENOM:HOG000217922 EMBL:U33818
            EMBL:U75686 EMBL:AL845289 EMBL:BC065540 EMBL:BC094755
            IPI:IPI00012726 IPI:IPI00555747 IPI:IPI00642904
            RefSeq:NP_001129125.1 RefSeq:NP_001129126.1 RefSeq:NP_003810.1
            UniGene:Hs.169900 ProteinModelPortal:Q13310 SMR:Q13310
            IntAct:Q13310 MINT:MINT-1189867 STRING:Q13310 PhosphoSite:Q13310
            DMDM:12229875 PaxDb:Q13310 PRIDE:Q13310 Ensembl:ENST00000372856
            Ensembl:ENST00000372857 Ensembl:ENST00000372858 GeneID:8761
            KEGG:hsa:8761 UCSC:uc001cdm.2 UCSC:uc010oiv.1 CTD:8761
            GeneCards:GC01M040026 HGNC:HGNC:8557 HPA:HPA027301 MIM:603407
            neXtProt:NX_Q13310 PharmGKB:PA32883 OMA:XVVCDEN OrthoDB:EOG4T1HM1
            PhylomeDB:Q13310 ChEMBL:CHEMBL5333 ChiTaRS:PABPC4 GenomeRNAi:8761
            NextBio:32864 ArrayExpress:Q13310 Bgee:Q13310 CleanEx:HS_PABPC4
            Genevestigator:Q13310 GermOnline:ENSG00000090621 Uniprot:Q13310
        Length = 644

 Score = 115 (45.5 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|A4IFC3 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0010494 "cytoplasmic stress granule" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005634
            GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0008143 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 GeneTree:ENSGT00640000091232 CTD:8761
            OMA:XVVCDEN OrthoDB:EOG4T1HM1 EMBL:DAAA02009142 EMBL:BC134509
            IPI:IPI00689745 RefSeq:NP_001077193.1 UniGene:Bt.11192 SMR:A4IFC3
            Ensembl:ENSBTAT00000022761 GeneID:534576 KEGG:bta:534576
            InParanoid:A4IFC3 NextBio:20876450 Uniprot:A4IFC3
        Length = 645

 Score = 115 (45.5 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|I3LS00 [details] [associations]
            symbol:PABPC1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000623 "negative regulation of nuclear-transcribed
            mRNA catabolic process, nonsense-mediated decay" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0008022 "protein C-terminus
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0071013 GO:GO:0010494
            GO:GO:0008143 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232 OMA:TITSAKX
            GO:GO:2000623 EMBL:CU302394 Ensembl:ENSSSCT00000032533
            Uniprot:I3LS00
        Length = 647

 Score = 115 (45.5 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 32/100 (32%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G I SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   +IF+ +L
Sbjct:    72 MNFDVIKG--KPVRIMWSQRDPSLRKSGVG---NIFIKNL 106

 Score = 96 (38.9 bits), Expect = 0.00077, P = 0.00077
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I++ +L   +D   L+  F++ G I S KV+ + + G S+GYGFV F T   AE+ ++  
Sbjct:   101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAAERAIEKM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|G3V9N0 [details] [associations]
            symbol:Pabpc4 "RCG31475, isoform CRA_a" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102 PROSITE:PS51309
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:CH473968 Gene3D:1.10.1900.10 SUPFAM:SSF63570
            TIGRFAMs:TIGR01628 EMBL:AC114512 GeneTree:ENSGT00640000091232
            OMA:XVVCDEN PRIDE:G3V9N0 Ensembl:ENSRNOT00000056592 Uniprot:G3V9N0
        Length = 660

 Score = 115 (45.5 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>UNIPROTKB|F1LVU1 [details] [associations]
            symbol:F1LVU1 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 IPI:IPI00950080
            Ensembl:ENSRNOT00000064004 Uniprot:F1LVU1
        Length = 188

 Score = 105 (42.0 bits), Expect = 7.4e-06, P = 7.4e-06
 Identities = 25/89 (28%), Positives = 46/89 (51%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             I+VG +    +E  L   F   G+I +I+V+ ++Q+G   G+ FV F  H T +K++ +Y
Sbjct:    93 IFVGGIKEDAEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVNY 152

Query:   155 TSILMPNTDQPFRLNWATFSTGDKRSDNG 183
              +I   N +    L+     +   +S +G
Sbjct:   153 HTINGHNCEVRKALSKQEMQSAGSQSGHG 181


>UNIPROTKB|G3XAC6 [details] [associations]
            symbol:RBM39 "RNA-binding region (RNP1, RRM) containing 2,
            isoform CRA_f" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 EMBL:CH471077 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL357374 TIGRFAMs:TIGR01622
            UniGene:Hs.282901 HGNC:HGNC:15923 ChiTaRS:RBM39
            ProteinModelPortal:G3XAC6 SMR:G3XAC6 Ensembl:ENST00000338163
            ArrayExpress:G3XAC6 Bgee:G3XAC6 Uniprot:G3XAC6
        Length = 423

 Score = 112 (44.5 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G I SI+++ + +TG S+GYGF+ F    
Sbjct:   245 GSAGPMR--LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFST 175
              A+K L+      +    +P ++   T  T
Sbjct:   303 CAKKALEQLNGFELAG--RPMKVGHVTERT 330


>CGD|CAL0003839 [details] [associations]
            symbol:TIF35 species:5476 "Candida albicans" [GO:0016282
            "eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
            "eukaryotic translation initiation factor 3 complex, eIF3m"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0071540
            "eukaryotic translation initiation factor 3 complex, eIF3e"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002188
            "translation reinitiation" evidence=IEA] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360 CGD:CAL0003839
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003743
            eggNOG:COG0724 HSSP:O75821 KO:K03248 HAMAP:MF_03006
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353 EMBL:AACQ01000092
            RefSeq:XP_715036.1 ProteinModelPortal:Q59ZV5 STRING:Q59ZV5
            GeneID:3643308 KEGG:cal:CaO19.7236 Uniprot:Q59ZV5
        Length = 279

 Score = 109 (43.4 bits), Expect = 8.2e-06, P = 8.2e-06
 Identities = 20/65 (30%), Positives = 40/65 (61%)

Query:    91 ENKTIWVGDLHHWMDENYLHS-CFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             ++ T+ V  L+ ++DE+ L +  FA  G +  + ++RN++TG S G+ +V F T   A++
Sbjct:   195 DSTTLKVSQLNSFVDEDMLRNELFAKFGPLQRVTIVRNRETGESRGFAYVSFATEEIAQR 254

Query:   150 VLQSY 154
              L ++
Sbjct:   255 ALDTF 259


>UNIPROTKB|Q8N9W6 [details] [associations]
            symbol:BOLL "Protein boule-like" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008494
            "translation activator activity" evidence=IDA] [GO:0045948
            "positive regulation of translational initiation" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007126 "meiosis"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0007126
            GO:GO:0005737 GO:GO:0030154 GO:GO:0000166 EMBL:CH471063
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0008494
            EMBL:AF272858 EMBL:AM295005 EMBL:AK058099 EMBL:AK093453
            EMBL:AK097795 EMBL:AC011997 EMBL:BC033674 IPI:IPI00056506
            IPI:IPI00377133 IPI:IPI00396276 IPI:IPI00871244 RefSeq:NP_149019.1
            RefSeq:NP_932074.1 UniGene:Hs.169797 ProteinModelPortal:Q8N9W6
            SMR:Q8N9W6 IntAct:Q8N9W6 STRING:Q8N9W6 PhosphoSite:Q8N9W6
            DMDM:44887719 PRIDE:Q8N9W6 DNASU:66037 Ensembl:ENST00000321801
            Ensembl:ENST00000392296 Ensembl:ENST00000433157 GeneID:66037
            KEGG:hsa:66037 UCSC:uc002uur.2 UCSC:uc002uus.2 UCSC:uc002uut.2
            UCSC:uc002uuu.1 CTD:66037 GeneCards:GC02M198591 H-InvDB:HIX0030239
            HGNC:HGNC:14273 HPA:HPA018678 MIM:606165 neXtProt:NX_Q8N9W6
            PharmGKB:PA25397 eggNOG:NOG260394 HOGENOM:HOG000095250
            HOVERGEN:HBG048761 OrthoDB:EOG4MPHQQ GenomeRNAi:66037 NextBio:67546
            ArrayExpress:Q8N9W6 Bgee:Q8N9W6 CleanEx:HS_BOLL
            Genevestigator:Q8N9W6 GermOnline:ENSG00000152430 GO:GO:0045948
            Uniprot:Q8N9W6
        Length = 283

 Score = 109 (43.4 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 22/58 (37%), Positives = 36/58 (62%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+VG +    +E+ L   F+  G +  +K++ N + G+S+GYGFV F T   A+K+LQ
Sbjct:    35 IFVGGIDFKTNESDLRKFFSQYGSVKEVKIV-NDRAGVSKGYGFVTFETQEDAQKILQ 91


>UNIPROTKB|O57437 [details] [associations]
            symbol:dazl-a "Deleted in azoospermia-like-A" species:8355
            "Xenopus laevis" [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0008354 "germ cell migration" evidence=IMP] [GO:0008494
            "translation activator activity" evidence=IDA] [GO:0032019
            "mitochondrial cloud" evidence=IDA] [GO:0045495 "pole plasm"
            evidence=IDA] [GO:0045948 "positive regulation of translational
            initiation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0007275
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003723 GO:GO:0008494 GO:GO:0007281 GO:GO:0045948
            GO:GO:0045495 GO:GO:0008354 EMBL:AF017778 RefSeq:NP_001081772.1
            UniGene:Xl.311 HSSP:Q15427 ProteinModelPortal:O57437 GeneID:398041
            KEGG:xla:398041 CTD:1618 Xenbase:XB-GENE-6078612 HOVERGEN:HBG000573
            GO:GO:0032019 Uniprot:O57437
        Length = 286

 Score = 109 (43.4 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  +   F   G +  +K+I ++ TG+S+GYGF+ F      +K+++S
Sbjct:    34 TVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEVDVQKIVKS 92

Query:   154 YTS 156
               S
Sbjct:    93 QIS 95


>UNIPROTKB|E1C903 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008143 "poly(A) RNA
            binding" evidence=IEA] [GO:0008266 "poly(U) RNA binding"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GeneTree:ENSGT00640000091232 CTD:8761 OMA:XVVCDEN EMBL:AADN02043739
            EMBL:AADN02043740 IPI:IPI00587440 RefSeq:XP_417821.2
            UniGene:Gga.11375 ProteinModelPortal:E1C903 PRIDE:E1C903
            Ensembl:ENSGALT00000006028 GeneID:419674 KEGG:gga:419674
            NextBio:20822696 Uniprot:E1C903
        Length = 630

 Score = 114 (45.2 bits), Expect = 8.7e-06, P = 8.7e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    12 SLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    72 MNFDVIKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 106


>ZFIN|ZDB-GENE-030131-9663 [details] [associations]
            symbol:pabpc4 "poly(A) binding protein,
            cytoplasmic 4 (inducible form)" species:7955 "Danio rerio"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            ZFIN:ZDB-GENE-030131-9663 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            HOGENOM:HOG000217922 HSSP:P11940 CTD:8761 OrthoDB:EOG4T1HM1
            EMBL:BC053126 IPI:IPI00489290 RefSeq:NP_958453.1 UniGene:Dr.16284
            ProteinModelPortal:Q7T3G5 SMR:Q7T3G5 STRING:Q7T3G5 PRIDE:Q7T3G5
            GeneID:321035 KEGG:dre:321035 InParanoid:Q7T3G5 OMA:NGMEASA
            NextBio:20807204 ArrayExpress:Q7T3G5 Bgee:Q7T3G5 Uniprot:Q7T3G5
        Length = 637

 Score = 114 (45.2 bits), Expect = 8.9e-06, P = 8.9e-06
 Identities = 30/100 (30%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VGDLH  + E  L+  F+  G + SI+V R+  T  S GY +V F   A AE+ L +
Sbjct:    13 SLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 72

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+      ++S  G   ++F+ +L
Sbjct:    73 MNFDVVKG--KPIRIMWSQRDPSLRKSGVG---NVFIKNL 107


>UNIPROTKB|Q8EK89 [details] [associations]
            symbol:SO_0208 "RNA-binding protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P19339
            HOGENOM:HOG000269562 RefSeq:NP_715849.1 ProteinModelPortal:Q8EK89
            GeneID:1168093 KEGG:son:SO_0208 PATRIC:23520091 OMA:YTGPTMT
            ProtClustDB:CLSK905649 Uniprot:Q8EK89
        Length = 154

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 20/62 (32%), Positives = 39/62 (62%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             G   T++VG+L + + E  +   F   G + S++++R+++TG  +G+GFVE  + A A+K
Sbjct:    61 GPTMTLYVGNLPYRVHEGEVKVLFGEFGPVNSVRLVRDRKTGRRKGFGFVEM-SEAGAQK 119

Query:   150 VL 151
              +
Sbjct:   120 AM 121


>UNIPROTKB|Q9KVI6 [details] [associations]
            symbol:VC_0159 "RNA-binding protein" species:243277 "Vibrio
            cholerae O1 biovar El Tor str. N16961" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016070 HSSP:P33240
            OMA:YTGPTMT PIR:D82358 RefSeq:NP_229816.1 ProteinModelPortal:Q9KVI6
            DNASU:2614888 GeneID:2614888 KEGG:vch:VC0159 PATRIC:20079354
            ProtClustDB:CLSK873887 Uniprot:Q9KVI6
        Length = 152

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 17/47 (36%), Positives = 35/47 (74%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFV 139
             KT++VG+L +  +E+++   FA  GE+ +++++++K+TG   G+GFV
Sbjct:    64 KTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDKRTGKRRGFGFV 110


>TIGR_CMR|SO_0208 [details] [associations]
            symbol:SO_0208 "RNA-binding protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AE014299 GenomeReviews:AE014299_GR HSSP:P19339
            HOGENOM:HOG000269562 RefSeq:NP_715849.1 ProteinModelPortal:Q8EK89
            GeneID:1168093 KEGG:son:SO_0208 PATRIC:23520091 OMA:YTGPTMT
            ProtClustDB:CLSK905649 Uniprot:Q8EK89
        Length = 154

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 20/62 (32%), Positives = 39/62 (62%)

Query:    90 GENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             G   T++VG+L + + E  +   F   G + S++++R+++TG  +G+GFVE  + A A+K
Sbjct:    61 GPTMTLYVGNLPYRVHEGEVKVLFGEFGPVNSVRLVRDRKTGRRKGFGFVEM-SEAGAQK 119

Query:   150 VL 151
              +
Sbjct:   120 AM 121


>TIGR_CMR|VC_0159 [details] [associations]
            symbol:VC_0159 "RNA-binding protein" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0016070 "RNA metabolic process" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0016070 HSSP:P33240
            OMA:YTGPTMT PIR:D82358 RefSeq:NP_229816.1 ProteinModelPortal:Q9KVI6
            DNASU:2614888 GeneID:2614888 KEGG:vch:VC0159 PATRIC:20079354
            ProtClustDB:CLSK873887 Uniprot:Q9KVI6
        Length = 152

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 17/47 (36%), Positives = 35/47 (74%)

Query:    93 KTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFV 139
             KT++VG+L +  +E+++   FA  GE+ +++++++K+TG   G+GFV
Sbjct:    64 KTLYVGNLPYKANESHVKELFAEFGEVFAVRLMKDKRTGKRRGFGFV 110


>TAIR|locus:2077427 [details] [associations]
            symbol:AT3G08000 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC013483 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q14103 UniGene:At.40270 UniGene:At.28103
            EMBL:BT012118 EMBL:BT012373 IPI:IPI00520412 RefSeq:NP_187457.1
            ProteinModelPortal:Q9SFB4 SMR:Q9SFB4 EnsemblPlants:AT3G08000.1
            GeneID:819991 KEGG:ath:AT3G08000 TAIR:At3g08000 InParanoid:Q9SFB4
            OMA:FCTSSSA PhylomeDB:Q9SFB4 ProtClustDB:CLSN2915579
            Genevestigator:Q9SFB4 Uniprot:Q9SFB4
        Length = 143

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query:    87 SGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEF 141
             S    +  +++G L   +DE  L   F+S GE+A +++  +K +G S G+GFV+F
Sbjct:    35 SSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDF 89


>ZFIN|ZDB-GENE-020419-31 [details] [associations]
            symbol:ncbp2 "nuclear cap binding protein subunit 2"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000339 "RNA cap binding" evidence=IEA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA;ISS]
            [GO:0005846 "nuclear cap binding complex" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
            [GO:0046833 "positive regulation of RNA export from nucleus"
            evidence=ISS] [GO:0000340 "RNA 7-methylguanosine cap binding"
            evidence=ISS] [GO:0006408 "snRNA export from nucleus" evidence=ISS]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0051028 "mRNA
            transport" evidence=IEA] [GO:0006370 "7-methylguanosine mRNA
            capping" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR027157
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-020419-31
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0031047 GO:GO:0000340
            GO:GO:0051028 eggNOG:COG0724 GO:GO:0006370 GO:GO:0045292
            HOGENOM:HOG000217589 OrthoDB:EOG470TJG PANTHER:PTHR18847
            HSSP:P52298 KO:K12883 CTD:22916 GeneTree:ENSGT00390000003197
            OMA:RQDYDPA GO:GO:0046833 GO:GO:0006408 EMBL:AY099530 EMBL:AL953867
            EMBL:BC083529 IPI:IPI00487113 RefSeq:NP_775356.1 UniGene:Dr.83993
            ProteinModelPortal:Q8JGR6 SMR:Q8JGR6 STRING:Q8JGR6
            Ensembl:ENSDART00000008365 GeneID:192325 KEGG:dre:192325
            InParanoid:Q8JGR6 NextBio:20797161 Bgee:Q8JGR6 Uniprot:Q8JGR6
        Length = 155

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 25/87 (28%), Positives = 45/87 (51%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ T++VG+L  +  E  +H  FA  G++  I +  +K    + G+ FVE++T A AE  
Sbjct:    37 QSATLYVGNLSFYTTEEQVHELFAKCGDVKRIIIGLDKIKKTACGFCFVEYYTRADAENA 96

Query:   151 LQSYTSILMPNTDQPFRLNW-ATFSTG 176
             ++      +   D+  R +W A F  G
Sbjct:    97 MRFVNGTRLD--DRIIRTDWDAGFKEG 121


>ZFIN|ZDB-GENE-050327-97 [details] [associations]
            symbol:rbm39b "RNA binding motif protein 39b"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050327-97
            GO:GO:0005634 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG057646 TIGRFAMs:TIGR01622
            HOGENOM:HOG000236253 GeneTree:ENSGT00690000102089 EMBL:CR550308
            EMBL:BC091794 IPI:IPI00498276 RefSeq:NP_001014392.1
            UniGene:Dr.76447 SMR:Q58ER0 Ensembl:ENSDART00000061328
            GeneID:541556 KEGG:dre:541556 CTD:541556 InParanoid:Q58ER0
            OMA:NCLASST NextBio:20879330 Uniprot:Q58ER0
        Length = 539

 Score = 113 (44.8 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query:    88 GGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATA 147
             GG     ++VG LH  + E+ L   F   G+I  I+++ + +TG S+GYGF+ F     A
Sbjct:   259 GGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA 318

Query:   148 EKVLQ 152
             +K L+
Sbjct:   319 KKALE 323


>WB|WBGene00004723 [details] [associations]
            symbol:sap-49 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0042127 "regulation of cell proliferation"
            evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
            [GO:0040022 "feminization of hermaphroditic germ-line"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0009792 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0040011 GO:GO:0005681
            GO:GO:0003723 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 EMBL:Z46676
            GO:GO:0040020 NextBio:883379 GO:GO:0040022 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 PIR:T19069 RefSeq:NP_001021932.1
            ProteinModelPortal:Q09442 SMR:Q09442 IntAct:Q09442 STRING:Q09442
            PaxDb:Q09442 EnsemblMetazoa:C08B11.5.1 EnsemblMetazoa:C08B11.5.2
            GeneID:4363023 KEGG:cel:CELE_C08B11.5 UCSC:C08B11.5.1 CTD:4363023
            WormBase:C08B11.5 InParanoid:Q09442 OMA:VSETLLW ArrayExpress:Q09442
            Uniprot:Q09442
        Length = 388

 Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 30/103 (29%), Positives = 53/103 (51%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ TI+VG L   + E+ L       G + S+ + +++ T   +G+GFVEF     A+  
Sbjct:    11 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P ++N A  S  +K  D G +  IFVG+L
Sbjct:    71 IKILNMIKLYG--KPIKVNKA--SAHEKNMDVGAN--IFVGNL 107


>UNIPROTKB|Q09442 [details] [associations]
            symbol:sap-49 "Splicing factor 3B subunit 4" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0040011
            GO:GO:0005681 GO:GO:0003723 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 EMBL:Z46676 GO:GO:0040020 NextBio:883379
            GO:GO:0040022 eggNOG:COG0724 GeneTree:ENSGT00690000101901
            PIR:T19069 RefSeq:NP_001021932.1 ProteinModelPortal:Q09442
            SMR:Q09442 IntAct:Q09442 STRING:Q09442 PaxDb:Q09442
            EnsemblMetazoa:C08B11.5.1 EnsemblMetazoa:C08B11.5.2 GeneID:4363023
            KEGG:cel:CELE_C08B11.5 UCSC:C08B11.5.1 CTD:4363023
            WormBase:C08B11.5 InParanoid:Q09442 OMA:VSETLLW ArrayExpress:Q09442
            Uniprot:Q09442
        Length = 388

 Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
 Identities = 30/103 (29%), Positives = 53/103 (51%)

Query:    91 ENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKV 150
             ++ TI+VG L   + E+ L       G + S+ + +++ T   +G+GFVEF     A+  
Sbjct:    11 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70

Query:   151 LQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
             ++    I +    +P ++N A  S  +K  D G +  IFVG+L
Sbjct:    71 IKILNMIKLYG--KPIKVNKA--SAHEKNMDVGAN--IFVGNL 107


>ZFIN|ZDB-GENE-990415-245 [details] [associations]
            symbol:elavl1 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 1 (Hu antigen R)" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-245 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:BX649372 IPI:IPI00817195
            PRIDE:F1QM02 Ensembl:ENSDART00000146123 ArrayExpress:F1QM02
            Bgee:F1QM02 Uniprot:F1QM02
        Length = 340

 Score = 110 (43.8 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 31/104 (29%), Positives = 57/104 (54%)

Query:    91 ENKT-IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 149
             ++KT + V  L   M ++ L S F+S GE+ S K+IR+K  G S GYGFV +     AE+
Sbjct:    31 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAER 90

Query:   150 VLQSYTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
              + +   + + +  +  ++++A  S     SD+  D ++++  L
Sbjct:    91 AISTLNGLRLQS--KTIKVSYARPS-----SDSIKDANLYISGL 127


>TAIR|locus:2050992 [details] [associations]
            symbol:AT2G33410 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002685 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC002332 HOGENOM:HOG000234441 KO:K14411 HSSP:Q61474
            ProtClustDB:CLSN2913105 OMA:GNDSSYG EMBL:AY136298 EMBL:BT000416
            IPI:IPI00531202 PIR:B84745 RefSeq:NP_180899.1 UniGene:At.22217
            ProteinModelPortal:O22791 SMR:O22791 IntAct:O22791 STRING:O22791
            PRIDE:O22791 ProMEX:O22791 EnsemblPlants:AT2G33410.1 GeneID:817905
            KEGG:ath:AT2G33410 TAIR:At2g33410 InParanoid:O22791
            PhylomeDB:O22791 ArrayExpress:O22791 Genevestigator:O22791
            Uniprot:O22791
        Length = 404

 Score = 111 (44.1 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             +++G +    DEN L   F++ GE+  + V+R K TG   G+GFV F   A  ++VLQ
Sbjct:     8 LFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ 65


>UNIPROTKB|F5GYA8 [details] [associations]
            symbol:DAZ2 "Deleted in azoospermia protein 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HGNC:HGNC:15964
            EMBL:AC006983 EMBL:AC007039 EMBL:AC053490 IPI:IPI00910411
            ProteinModelPortal:F5GYA8 SMR:F5GYA8 Ensembl:ENST00000536288
            ArrayExpress:F5GYA8 Bgee:F5GYA8 Uniprot:F5GYA8
        Length = 581

 Score = 113 (44.8 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 21/50 (42%), Positives = 31/50 (62%)

Query:   104 MDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             MDE  + SCF   G +  +K+I N+ TG+S+GYGFV F      +K++ S
Sbjct:     2 MDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGS 50


>UNIPROTKB|Q4V7Y4 [details] [associations]
            symbol:dazl-b "Deleted in azoospermia-like-B" species:8355
            "Xenopus laevis" [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007281 "germ cell
            development" evidence=ISS] [GO:0008354 "germ cell migration"
            evidence=ISS] [GO:0008494 "translation activator activity"
            evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=ISS]
            [GO:0045948 "positive regulation of translational initiation"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007275 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048477 GO:GO:0007283 GO:GO:0003723
            GO:GO:0008494 GO:GO:0007281 GO:GO:0045948 GO:GO:0008354
            UniGene:Xl.311 HSSP:Q15427 Xenbase:XB-GENE-6078612
            HOVERGEN:HBG000573 GO:GO:0032019 EMBL:BC071023 EMBL:BC097658
            ProteinModelPortal:Q4V7Y4 Uniprot:Q4V7Y4
        Length = 286

 Score = 108 (43.1 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 21/63 (33%), Positives = 37/63 (58%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             T++VG +   MDE  +   F   G +  +K+I ++ TG+S+GYGF+ F      +K+++S
Sbjct:    34 TVFVGGIDITMDEIEIRDFFTRFGNVKEVKIITDR-TGVSKGYGFISFSDEVDIQKIVKS 92

Query:   154 YTS 156
               S
Sbjct:    93 QIS 95


>RGD|1310071 [details] [associations]
            symbol:Rbm39 "RNA binding motif protein 39" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
            "centrosome" evidence=ISO] [GO:0015630 "microtubule cytoskeleton"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310071
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH474050 eggNOG:COG0724
            HOVERGEN:HBG057646 TIGRFAMs:TIGR01622 CTD:9584 HOGENOM:HOG000236253
            KO:K13091 OrthoDB:EOG4RJG1P IPI:IPI00555302 GeneID:100910882
            KEGG:rno:100910882 EMBL:BC091394 RefSeq:NP_001013225.1
            RefSeq:XP_003749654.1 UniGene:Rn.8555 SMR:Q5BJP4 STRING:Q5BJP4
            GeneID:362251 KEGG:rno:362251 UCSC:RGD:1310071 InParanoid:Q5BJP4
            NextBio:679201 Genevestigator:Q5BJP4 Uniprot:Q5BJP4
        Length = 524

 Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G I SI+++ + +TG S+GYGF+ F    
Sbjct:   245 GSAGPMR--LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFST 175
              A+K L+      +    +P ++   T  T
Sbjct:   303 CAKKALEQLNGFELAG--RPMKVGHVTERT 330


>UNIPROTKB|Q98SP8 [details] [associations]
            symbol:epabp-a "Embryonic polyadenylate-binding protein A"
            species:8355 "Xenopus laevis" [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031370 "eukaryotic
            initiation factor 4G binding" evidence=IPI] [GO:0043009 "chordate
            embryonic development" evidence=IEP] [GO:0043621 "protein
            self-association" evidence=IPI] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0043009 GO:GO:0060212 GO:GO:0008143
            HOVERGEN:HBG002295 EMBL:AF338225 EMBL:BC080020
            RefSeq:NP_001082094.1 UniGene:Xl.777 ProteinModelPortal:Q98SP8
            SMR:Q98SP8 PRIDE:Q98SP8 GeneID:398221 KEGG:xla:398221 CTD:398221
            Xenbase:XB-GENE-5742498 KO:K13126 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 Uniprot:Q98SP8
        Length = 629

 Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 29/100 (29%), Positives = 53/100 (53%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             ++++GDLH  + E  L+  F+  G I SI+V R+  T  S  Y ++ F   A AE+ L +
Sbjct:    12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 ++    +P R+ W+    G ++S  G   ++F+ +L
Sbjct:    72 MNFEVIKG--RPIRIMWSQRDPGLRKSGVG---NVFIKNL 106

 Score = 101 (40.6 bits), Expect = 0.00022, P = 0.00022
 Identities = 22/65 (33%), Positives = 38/65 (58%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             +++ +L   +D   L+  F++ G I S KV+ ++  G S GYGFV F TH  A + +Q+ 
Sbjct:   101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEH-G-SRGYGFVHFETHEAANRAIQTM 158

Query:   155 TSILM 159
               +L+
Sbjct:   159 NGMLL 163


>UNIPROTKB|A4QUF0 [details] [associations]
            symbol:PAB1 "Polyadenylate-binding protein, cytoplasmic and
            nuclear" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000504 InterPro:IPR002004
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS51309 SMART:SM00360 SMART:SM00517
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0000166
            EMBL:CM001233 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0043581 GO:GO:0051028 eggNOG:COG0724 KO:K13126
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            OrthoDB:EOG4QJVWJ RefSeq:XP_003712237.1 ProteinModelPortal:A4QUF0
            SMR:A4QUF0 STRING:A4QUF0 EnsemblFungi:MGG_09505T0 GeneID:2680542
            KEGG:mgr:MGG_09505 Uniprot:A4QUF0
        Length = 762

 Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 29/100 (29%), Positives = 52/100 (52%)

Query:    94 TIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQS 153
             +++VG+L   + E  L   F+  G +ASI+V R+  T  S GY +V + T A  EK L+ 
Sbjct:    62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121

Query:   154 YTSILMPNTDQPFRLNWATFSTGDKRSDNGPDLSIFVGDL 193
                 L+    +P R+ W+      +++  G   ++F+ +L
Sbjct:   122 LNYTLIKG--RPCRIMWSQRDPALRKTGQG---NVFIKNL 156

 Score = 97 (39.2 bits), Expect = 0.00073, P = 0.00073
 Identities = 18/58 (31%), Positives = 35/58 (60%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQ 152
             I+V +++  + ++   + F   G++ S  + R+++TG S G+GFV F +H  A K +Q
Sbjct:   244 IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQ 301

 Score = 96 (38.9 bits), Expect = 0.00094, P = 0.00094
 Identities = 21/65 (32%), Positives = 37/65 (56%)

Query:    95 IWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEKVLQSY 154
             +++ +L   +D   LH  FA+ G I S KV ++ + G S+GYGFV + T   A + ++  
Sbjct:   151 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQD-ENGNSKGYGFVHYETDEAASQAIKHV 209

Query:   155 TSILM 159
               +L+
Sbjct:   210 NGMLL 214


>UNIPROTKB|F6QIA5 [details] [associations]
            symbol:RBM39 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622 OMA:AGWDTEI
            GeneTree:ENSGT00690000102089 EMBL:DAAA02036526 IPI:IPI01017797
            Ensembl:ENSBTAT00000002491 Uniprot:F6QIA5
        Length = 525

 Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G I SI+++ + +TG S+GYGF+ F    
Sbjct:   245 GSAGPMR--LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFST 175
              A+K L+      +    +P ++   T  T
Sbjct:   303 CAKKALEQLNGFELAG--RPMKVGHVTERT 330


>UNIPROTKB|F2Z5I2 [details] [associations]
            symbol:RBM39 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622 OMA:AGWDTEI
            GeneTree:ENSGT00690000102089 EMBL:CU210870
            Ensembl:ENSSSCT00000007997 ArrayExpress:F2Z5I2 Uniprot:F2Z5I2
        Length = 525

 Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:    86 GSGGGENKTIWVGDLHHWMDENYLHSCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHA 145
             GS G     ++VG LH  + E+ L   F   G I SI+++ + +TG S+GYGF+ F    
Sbjct:   245 GSAGPMR--LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE 302

Query:   146 TAEKVLQSYTSILMPNTDQPFRLNWATFST 175
              A+K L+      +    +P ++   T  T
Sbjct:   303 CAKKALEQLNGFELAG--RPMKVGHVTERT 330

WARNING:  HSPs involving 307 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      196       127   0.00091  102 3  11 22  0.39    31
                                                     29  0.40    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  557
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  143 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.79u 0.22s 11.01t   Elapsed:  00:00:01
  Total cpu time:  10.82u 0.22s 11.04t   Elapsed:  00:00:01
  Start:  Sat May 11 14:54:27 2013   End:  Sat May 11 14:54:28 2013
WARNINGS ISSUED:  2

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