BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037461
(1077 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 1859 bits (4815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 909/1120 (81%), Positives = 996/1120 (88%), Gaps = 47/1120 (4%)
Query: 1 MTIMTPAPIDQQEDEEMLVPHSDLADN-HQPMEVVAQPETANAVENNQPLDDPPSSRFTW 59
MT+MTP P+DQ EDEEMLVP+SDL D QPMEV QPETA + NQP +DPP+ +FTW
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEV-TQPETAASTVENQPAEDPPTLKFTW 59
Query: 60 RIENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQ 119
I NFSR NT+KHYS++F+VGG+KWR+LIFPKGNNVDHLSMYLDV+D++SLPYGWSRYAQ
Sbjct: 60 TIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQ 119
Query: 120 FSLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEV 179
FSLAV+NQIH++Y+VRK+TQHQFNARESDWGFTSFMPL ELYDP+RGYLVNDT++VEAEV
Sbjct: 120 FSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEV 179
Query: 180 IVRRVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPS 239
VR+V+DYWSYDSKKETG+VGLKNQGATCYMNSLLQTL+HIPYFRKAVYHMPTTEND P+
Sbjct: 180 AVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT 239
Query: 240 GSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKG 299
SIPLALQSLFYKLQY+D+SVATKELTKSFGWDTYDSFMQHDVQELNRVL EKLEDKMKG
Sbjct: 240 ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG 299
Query: 300 TVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERL 359
TVVEGTIQQLFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVERL
Sbjct: 300 TVVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 359
Query: 360 EGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL 419
EGDNKYHAE +GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL+LDL
Sbjct: 360 EGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDL 419
Query: 420 DRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE 479
DRE+GKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
Sbjct: 420 DREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE 479
Query: 480 DLKRALEEQYGGEEELPQTNPGFNNT-PFKFTKYSNAYMLVYIRESDKDKIICNVDEQDI 538
DLKRALEEQYGGEEELPQTNPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDE+DI
Sbjct: 480 DLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDI 539
Query: 539 AEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVRSF 598
AEHLR RLKKEQEEKE K++ KA+AHLYT+IKVARD+DL EQIGKDIYFDLVDHDKVRSF
Sbjct: 540 AEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSF 599
Query: 599 RIQKQIPFNLFK-----------------------------------------VGQLREV 617
RIQKQ PF FK VGQ+RE
Sbjct: 600 RIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREA 659
Query: 618 SNKVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTG 677
SNK + AELKLFLEVE DLRPI PPEK+KEDILLFFKLYDPEK L Y GRL VKS+
Sbjct: 660 SNKANTAELKLFLEVEHL-DLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSS 718
Query: 678 KPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKS 737
KPM+ KLNEM G+APDEEI+L+EEIKFEP VMCE ++K+ +FR Q+EDGDIICFQK
Sbjct: 719 KPMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKP 778
Query: 738 TPIEGVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDDVVERVAQQ 797
+ + + YP VPSFL+YV NRQ+V FR+LEKPKED+F LE+SK +TYDDVVE+VA++
Sbjct: 779 LVNKEI-ECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEK 837
Query: 798 LGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDVLYYEVLDIPLPEL 857
LGLDDPSK+RLTSHNCYSQQPKPQPIKYRGVDHLSDML+HYNQTSD+LYYEVLDIPLPEL
Sbjct: 838 LGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPEL 897
Query: 858 QCLKTLKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKVELSQPDAELRLLEVFYHK 917
Q LKTLKVAFHHATK+EV +H IRLPKQSTVGDVIN+LKTKVELS PDAELRLLEVFYHK
Sbjct: 898 QGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHK 957
Query: 918 IYKIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFG 977
IYKIFP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLI VYHF KET QNQ Q+QNFG
Sbjct: 958 IYKIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQ-QVQNFG 1016
Query: 978 EPFFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRR 1037
EPFFLVIHEGETL+EIK RIQ+KL V DE+FAKWKFAF+S+GRPEYLQDTD+V +RFQRR
Sbjct: 1017 EPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRR 1076
Query: 1038 DVYGAWEQYLGLEHSDSAPKRAYAANQNRHTYEKPVKIYN 1077
DVYGA+EQYLGLEH+D+ PKRAYAANQNRH YEKPVKIYN
Sbjct: 1077 DVYGAFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN 1116
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 1854 bits (4802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 899/1118 (80%), Positives = 994/1118 (88%), Gaps = 44/1118 (3%)
Query: 1 MTIMTPAPIDQQEDEEMLVPHSDLADNHQPMEVVAQPETANAVENNQPLDDPPSSRFTWR 60
MT+MTP P+DQQEDEEMLVP+ DL + QPMEV A AVEN P +DPPS +FTW
Sbjct: 1 MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEVAQTDPAATAVENPPP-EDPPSLKFTWT 59
Query: 61 IENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQF 120
I F+RLNT+KHYS++F+VGG+KWR+LIFPKGNNVDHLSMYLDVAD+++LPYGWSRY+QF
Sbjct: 60 IPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQF 119
Query: 121 SLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEVI 180
SLAV+NQ++++YS+RK+TQHQFNARESDWGFTSFMPL ELY+P RGYLVNDT+++EAEV
Sbjct: 120 SLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVA 179
Query: 181 VRRVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSG 240
VR+V+DYWSYDSKKETG+VGLKNQGATCYMNSLLQTL+HIPYFRKAVYHMPTTEND P+
Sbjct: 180 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 239
Query: 241 SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT 300
SIPLALQSLFYKLQY+D+SVATKELTKSFGWDTYDSFMQHDVQELNRVL EKLEDKMKGT
Sbjct: 240 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 299
Query: 301 VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE 360
VVEGTIQ+LFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGC+DVYASFDKYVEVERLE
Sbjct: 300 VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 359
Query: 361 GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 420
GDNKYHAE + LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
Sbjct: 360 GDNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 419
Query: 421 RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
RE+G+YLSPDAD+SVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 420 REDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 479
Query: 481 LKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAE 540
+KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDE+DIAE
Sbjct: 480 VKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAE 539
Query: 541 HLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVRSFRI 600
HLR RLKKEQEEKE K+K KA+AHL+T IKVARDDD+ EQIGK+IYFDLVDH+KVRSFRI
Sbjct: 540 HLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRI 599
Query: 601 QKQIPFNLFK-----------------------------------------VGQLREVSN 619
QKQ PF FK VGQ+RE SN
Sbjct: 600 QKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASN 659
Query: 620 KVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKP 679
K +NAELKLFLE+ERGPD PI PPEKT EDILLFFKLYDPE LRYVGRL VKS+ KP
Sbjct: 660 KANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKP 719
Query: 680 MEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP 739
M+ + +LN+MAG+APDEEI+L+EEIKFEP VMCE I+K+ +FR Q+EDGDIIC+QK
Sbjct: 720 MDIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLS 779
Query: 740 IEGVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDDVVERVAQQLG 799
IE +FRYP+VPSFL+YV NR++V FR+LEKPKED+F +E+SKL+TYDDVVERVA++LG
Sbjct: 780 IEE-SEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLG 838
Query: 800 LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDVLYYEVLDIPLPELQC 859
LDDPSK+RLTSHNCYSQQPKPQPIKYRGVDHLSDML+HYNQTSD+LYYEVLDIPLPELQ
Sbjct: 839 LDDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQG 898
Query: 860 LKTLKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKVELSQPDAELRLLEVFYHKIY 919
LKTLKVAFH ATKDEV +H IRLPKQSTVGDVIN+LKTKVELS DAELRLLEVF+HKIY
Sbjct: 899 LKTLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIY 958
Query: 920 KIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEP 979
KIFP E+IENINDQYWTLRAEEIPEEEKN+GP+DRLIHVYHFTKE QNQ Q+QNFGEP
Sbjct: 959 KIFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQ-QVQNFGEP 1017
Query: 980 FFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDV 1039
FFLVIHEGETL+EIK RIQ+KL VPDE+FAKWKFA S+GRP+YL DTD+V +RFQRRDV
Sbjct: 1018 FFLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDV 1077
Query: 1040 YGAWEQYLGLEHSDSAPKRAYAANQNRHTYEKPVKIYN 1077
YGAWEQYLGLEH D+APKRAYAANQNRH YEKPVKIYN
Sbjct: 1078 YGAWEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN 1115
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 390/1077 (36%), Positives = 577/1077 (53%), Gaps = 97/1077 (9%)
Query: 55 SRFTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPK----GNNVDHLSMYLDVADSSSL 110
+ F + +E FSRL+ F V W++++ P+ + + +L ++ S
Sbjct: 70 ATFQFTVERFSRLSESVLSPPCF-VRNLPWKIMVMPRFYPDRPHQKSVGFFLQ-CNAESD 127
Query: 111 PYGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVN 170
WS +AQ L +IN S + H F +E+DWGF++FM E+ DP +G++ +
Sbjct: 128 STSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDD 187
Query: 171 DTLIVEAEVIVRRVVDYW-SYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYH 229
D V EV V+ + ++DSKK TGYVGLKNQGATCYMNSLLQTLF RKAVY
Sbjct: 188 DK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYM 245
Query: 230 MPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVL 289
MPT E D S S+PLALQ +FY+LQ+SD V TK+LTKSFGW+T DSFMQHDVQEL RVL
Sbjct: 246 MPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVL 304
Query: 290 SEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
+ +E+KMKGT VEGTI +LF G ++YI+C VDY+S R+E +YD+QL +KG ++++ S
Sbjct: 305 LDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFES 364
Query: 350 FDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIND 409
F YV VE+L+GDNKY A ++GLQ+A+KGV F+ PPVL LQL RF YD D +KIND
Sbjct: 365 FVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKIND 424
Query: 410 RYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWY 469
R+EFP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W
Sbjct: 425 RFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWC 479
Query: 470 KFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKI 529
KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES ++
Sbjct: 480 KFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEV 528
Query: 530 ICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDL 589
+ V + DI + L ERL++E+ + K+KE+ EAHLY +++ +D G D+Y
Sbjct: 529 LQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY--- 585
Query: 590 VDHDKVR--SFRIQKQ---------------IPFNLFKVGQLREVSNKVHNAEL------ 626
D +KVR F++ K P + ++ ++ SN +
Sbjct: 586 -DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEAD 644
Query: 627 ---------------KLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYV 668
+FLE P+L P D++LF K+YDP+ L Y
Sbjct: 645 GSKTMIELSDNENPWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYC 703
Query: 669 GRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLED 728
G ++ + K + LP + + AG+ D + LYEE+K + + + +L D
Sbjct: 704 GHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMD 763
Query: 729 GDIICFQKSTPIEGVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYD 788
GDII FQK P + P + +++R V F P + F + +S Y
Sbjct: 764 GDIIVFQKDDPENDNSEL--PTAKEYFRDLYHRVDVIFCDKTIPNDPGFVVTLSNRMNYF 821
Query: 789 DVVERVAQQLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYN-QTSDVLYY 847
V + VAQ+L D P ++ Y P P+++ L D+L + + LYY
Sbjct: 822 QVAKTVAQRLNTD-PMLLQFFKSQGYRDGPG-NPLRHNYEGTLRDLLQFFKPRQPKKLYY 879
Query: 848 EVLDIPLPELQCLKTLKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKVELS-QPDA 906
+ L + + + + ++ K + ++ E + T+ K V D++ + K VEL +
Sbjct: 880 QQLKMKITDFENRRSFKCIWLNSQFREEEI-TLYPDKHGCVRDLLEECKKAVELGDEASG 938
Query: 907 ELRLLEVFYHKIYKIFPLNEKIENIN-DQYWTLRAEEIPEEEKNLGP-HDRLIHVYHFTK 964
LRLLE+ +KI + +E +E ++ T R EEIP ++ N+ ++ LI V HF K
Sbjct: 939 RLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVNIDKENEMLITVAHFHK 998
Query: 965 ETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYL 1024
E FG PF L IH+GE +E+ RIQ L + ++EF K+KFA + +GR +Y+
Sbjct: 999 EV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQYI 1052
Query: 1025 QDTDIVSSRFQRRDVYGAWEQ---YLGLEHSDSAPKRAYAANQNRHTY-EKPVKIYN 1077
+ + + G +LGL+H + APKR+ R+TY EK +KI+N
Sbjct: 1053 NEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYLEKAIKIHN 1103
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1
SV=1
Length = 1103
Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust.
Identities = 389/1077 (36%), Positives = 577/1077 (53%), Gaps = 97/1077 (9%)
Query: 55 SRFTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPK----GNNVDHLSMYLDVADSSSL 110
+ F + +E FSRL+ F V W++++ P+ + + +L ++ S
Sbjct: 70 ATFQFTVERFSRLSESVLSPPCF-VRNLPWKIMVMPRFYPDRPHQKSVGFFLQ-CNAESD 127
Query: 111 PYGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVN 170
WS +AQ L +IN S + H F E+DWGF++FM E+ DP +G++ +
Sbjct: 128 STSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVTDPEKGFIDD 187
Query: 171 DTLIVEAEVIVRRVVDYW-SYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYH 229
D V EV V+ + ++DSKK TGYVGLKNQGATCYMNSLLQTLF RKAVY
Sbjct: 188 DK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYM 245
Query: 230 MPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVL 289
MPT E D S S+PLALQ +FY+LQ+SD V TK+LTKSFGW+T DSFMQHDVQEL RVL
Sbjct: 246 MPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVL 304
Query: 290 SEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
+ +E+KMKGT VEGTI +LF G ++YI+C +VDY+S R+E +YD+QL +KG ++++ S
Sbjct: 305 LDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKDVDYRSDRREDYYDIQLSIKGKKNIFES 364
Query: 350 FDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIND 409
F YV VE+L+GDNKY A ++GLQ+A+KGV F+ PPVL LQL RF YD D +KIND
Sbjct: 365 FVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKIND 424
Query: 410 RYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWY 469
R+EFP QL LD ++L + N Y LH+VLVHSG HGGHY ++ P +W
Sbjct: 425 RFEFPEQLPLD----EFLQKTDPKDPAN-YILHAVLVHSGDNHGGHYVVYLNPKGDGKWC 479
Query: 470 KFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKI 529
KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES ++
Sbjct: 480 KFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEV 528
Query: 530 ICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDL 589
+ V + DI + L ERL++E+ + K+KE+ EAHLY +++ +D G D+Y
Sbjct: 529 LQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY--- 585
Query: 590 VDHDKVR--SFRIQKQ---------------IPFNLFKVGQLREVSNKVHNAEL------ 626
D +KVR F++ K P + ++ ++ SN +
Sbjct: 586 -DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEAD 644
Query: 627 ---------------KLFLEVERGPDLRPIA---PPEKTKEDILLFFKLYDPEKEELRYV 668
+FLE P+L P D++LF K+YDP+ L Y
Sbjct: 645 GNKTMIELSDNENPWTIFLET-VDPELAASGATLPKFDKDHDVMLFLKMYDPKTRSLNYC 703
Query: 669 GRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLED 728
G ++ + K + LP + + AG+ D + LYEE+K + + + +L D
Sbjct: 704 GHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEEVKPNLTERIQDYDVSLDKALDELMD 763
Query: 729 GDIICFQKSTPIEGVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYD 788
GDII FQK P + P + +++R V F P + F + +S Y
Sbjct: 764 GDIIVFQKDDPENDNSEL--PTAKEYFRDLYHRVDVIFCDKTIPNDPGFVVTLSNRMNYF 821
Query: 789 DVVERVAQQLGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYN-QTSDVLYY 847
V + VAQ+L D P ++ Y P P+++ L D+L + + LYY
Sbjct: 822 QVAKTVAQRLNTD-PMLLQFFKSQGYRDGPG-NPLRHNYEGTLRDLLQFFKPRQPKKLYY 879
Query: 848 EVLDIPLPELQCLKTLKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKVELS-QPDA 906
+ L + + + + ++ K + ++ E + T+ K V D++ + K VEL +
Sbjct: 880 QQLKMKITDFENRRSFKCIWLNSQFREEEI-TLYPDKHGCVRDLLEECKKAVELGDKASG 938
Query: 907 ELRLLEVFYHKIYKIFPLNEKIENINDQYW-TLRAEEIPEEEKNLGP-HDRLIHVYHFTK 964
LRLLE+ +KI + +E +E ++ T R EEIP ++ ++ ++ LI V HF K
Sbjct: 939 RLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKENEMLITVAHFHK 998
Query: 965 ETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYL 1024
E FG PF L IH+GE +E+ RIQ L + ++EF K+KFA + +GR +Y+
Sbjct: 999 EV------FGTFGIPFLLRIHQGEHFREVMKRIQSLLDIQEKEFEKFKFAIVMMGRHQYI 1052
Query: 1025 QDTDIVSSRFQRRDVYGAWEQ---YLGLEHSDSAPKRAYAANQNRHTY-EKPVKIYN 1077
+ + + G +LGL+H + APKR+ R+TY EK +KI+N
Sbjct: 1053 NEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAPKRS------RYTYLEKAIKIHN 1103
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1
SV=2
Length = 1102
Score = 583 bits (1503), Expect = e-165, Method: Compositional matrix adjust.
Identities = 394/1102 (35%), Positives = 589/1102 (53%), Gaps = 103/1102 (9%)
Query: 34 VAQPETANAVENNQPLDDPPSSR----FTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIF 89
VA + N E + ++D S R F + +E FSRL+ F V W++++
Sbjct: 46 VALSDGHNTAEED--MEDDTSWRSEATFQFTVERFSRLSESVLSPPCF-VRNLPWKIMVM 102
Query: 90 PK----GNNVDHLSMYLDVADSSSLPYGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNAR 145
P+ + + +L ++ S WS +AQ L +IN + S + H F +
Sbjct: 103 PRFYPDRPHQKSVGFFLQ-CNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHK 161
Query: 146 ESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEVIVRRVVDYW-SYDSKKETGYVGLKNQ 204
E+DWGF++FM E+ DP +G++ +D V EV V+ + ++DSKK TGYVGLKNQ
Sbjct: 162 ENDWGFSNFMAWSEVTDPEKGFIDDDK--VTFEVFVQADAPHGVAWDSKKHTGYVGLKNQ 219
Query: 205 GATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKE 264
GATCYMNSLLQTLF RKAVY MPT E D S S+PLALQ +FY+LQ+SD V TK+
Sbjct: 220 GATCYMNSLLQTLFFTNQLRKAVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKK 278
Query: 265 LTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 324
LTKSFGW+T DSFMQHDVQEL RVL + +E+KMKGT VEGTI +LF G ++YI+C VD
Sbjct: 279 LTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVD 338
Query: 325 YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDF 384
Y+S R+E +YD+QL +KG ++++ SF YV VE+L+GDNKY A ++GLQ+A+KGV F+
Sbjct: 339 YRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTL 398
Query: 385 PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSV 444
PPVL LQL RF YD D +KINDR+EFP QL LD ++L + N Y LH+V
Sbjct: 399 PPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAV 453
Query: 445 LVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNN 504
LVHSG HGGHY ++ P +W KFDD+ V++ + A+E YGG ++
Sbjct: 454 LVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDD---------- 503
Query: 505 TPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAH 564
+NAYMLVYIRES +++ V + DI + L ERL++E+ + K+KE+ EAH
Sbjct: 504 -DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAH 562
Query: 565 LYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQ---------------IPFN 607
LY +++ +D G D+Y D +KV+ F++ K P +
Sbjct: 563 LYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQD 618
Query: 608 LFKVGQLREVSNKVHNAEL---------------------KLFLEVERGPDLRPIA---P 643
++ ++ SN + +FLE P+L P
Sbjct: 619 QIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENPWTIFLET-VDPELAASGATLP 677
Query: 644 PEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEE 703
D++LF K+YDP+ L Y G ++ + K + LP + + AG+ D + LYEE
Sbjct: 678 KFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCDRAGFIQDTSLILYEE 737
Query: 704 IKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEGVGKFRYPEVPSFLDYVHNRQV 763
+K + + + +L DGDII FQK P + P + +++R
Sbjct: 738 VKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDNSEL--PTAKEYFRDLYHRVD 795
Query: 764 VHFRSLEKPKEDDFCLEMSKLYTYDDVVERVAQQLGLDDPSKIRLTSHNCYSQQPKPQPI 823
V F P + F + +S Y V + VAQ+L D P ++ Y P P+
Sbjct: 796 VIFCDKTIPNDPGFVVTLSNRMNYFQVAKTVAQRLNTD-PMLLQFFKSQGYRDGPG-NPL 853
Query: 824 KYRGVDHLSDMLIHYN-QTSDVLYYEVLDIPLPELQCLKTLKVAFHHATKDEVSVHTIRL 882
++ L D+L + + LYY+ L + + + + ++ K + ++ E + T+
Sbjct: 854 RHNYEGTLRDLLQFFKPRQPKKLYYQQLKMKITDFENRRSFKCIWLNSQFREEEI-TLYP 912
Query: 883 PKQSTVGDVINDLKTKVELSQ-PDAELRLLEVFYHKIYKIFPLNEKIENINDQYW-TLRA 940
K V D++ + K VEL + +LRLLE+ +KI + +E +E ++ T R
Sbjct: 913 DKHGCVRDLLEECKKAVELGEKASGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRI 972
Query: 941 EEIPEEEKNLGP-HDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQR 999
EEIP ++ ++ ++ L+ V HF KE FG PF L IH+GE +E+ RIQ
Sbjct: 973 EEIPLDQVDIDKENEMLVTVAHFHKEV------FGTFGIPFLLRIHQGEHFREVMKRIQS 1026
Query: 1000 KLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYGAWEQ---YLGLEHSDSAP 1056
L + ++EF K+KFA + +GR +Y+ + + + G +LGL+H + AP
Sbjct: 1027 LLDIQEKEFEKFKFAIVMMGRHQYINEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAP 1086
Query: 1057 KRAYAANQNRHTY-EKPVKIYN 1077
KR+ R+TY EK +KI+N
Sbjct: 1087 KRS------RYTYLEKAIKIHN 1102
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2
SV=1
Length = 1101
Score = 573 bits (1478), Expect = e-162, Method: Compositional matrix adjust.
Identities = 393/1102 (35%), Positives = 585/1102 (53%), Gaps = 104/1102 (9%)
Query: 34 VAQPETANAVENNQPLDDPPSSR----FTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIF 89
VA + N E + ++D S R F + +E F+RL ++ S V W++++
Sbjct: 46 VAMADGHNNTEED--MEDDTSWRSEATFQFTVERFNRL-SESVLSPPCFVRNLPWKIMVM 102
Query: 90 PK----GNNVDHLSMYLDVADSSSLPYGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNAR 145
P+ + + +L ++ S WS +AQ L +IN + S + H F +
Sbjct: 103 PRLYPDRPHQKSVGFFLQ-CNAESDSTSWSCHAQAVLKIINYKDDEKSFSRRISHLFFHK 161
Query: 146 ESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEVIVRRVVDYW-SYDSKKETGYVGLKNQ 204
E+DWGF++FM E+ DP +G++ D V EV V+ + ++DSKK TGYVGLKNQ
Sbjct: 162 ENDWGFSNFMAWSEVTDPEKGFIEEDK--VTFEVYVQADAPHGVAWDSKKHTGYVGLKNQ 219
Query: 205 GATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKE 264
GATCYMNSLLQTLF RKAVY MPT E D S S+PLALQ +FY+LQ+SD V TK+
Sbjct: 220 GATCYMNSLLQTLFFTNQLRKAVYMMPT-EGDDSSKSVPLALQRVFYELQHSDKPVGTKK 278
Query: 265 LTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 324
LTKSFGW+T DSFMQHDVQEL RVL + +E+KMKGT VEGTI +LF G ++YI+C +VD
Sbjct: 279 LTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVD 338
Query: 325 YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDF 384
Y+S R E +YD+QL +KG ++++ SF YV VE+L+GDNKY A ++GLQ+A+KGV F+
Sbjct: 339 YRSERIEDYYDIQLSIKGKKNIFESFIDYVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTL 398
Query: 385 PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSV 444
PPVL LQL RF YD D +KINDR+EFP QL LD ++L + N Y LH+V
Sbjct: 399 PPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLD----EFLQKTDPKDPAN-YILHAV 453
Query: 445 LVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNN 504
LVHSG HGGHY ++ P +W KFDD+ V++ + A+E YGG ++
Sbjct: 454 LVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDD---------- 503
Query: 505 TPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAH 564
+NAYMLVYIRES +++ V + DI + L ERL++E+ + K+KE+ EAH
Sbjct: 504 -DLSVRHCTNAYMLVYIRESKLSEVLQPVTDHDIPQQLVERLQEEKRIEAQKRKERQEAH 562
Query: 565 LYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQ---------------IPFN 607
LY +++ +D G D+Y D +KV+ F++ K P +
Sbjct: 563 LYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSTLTEFVQNLSQTMGFPQD 618
Query: 608 LFKVGQLREVSNKVHNAEL---------------------KLFLEVERGPDLRPIA---P 643
++ ++ SN + +FLE P++ P
Sbjct: 619 QIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENPWTIFLET-VDPEMAATGATLP 677
Query: 644 PEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEE 703
D++LF K+YDP+ L Y G ++ + K + LP + E AG+ + + LYEE
Sbjct: 678 KFDKDHDVMLFLKMYDPKTRSLNYCGHIYTPISCKIRDLLPVMCERAGFPQETNLILYEE 737
Query: 704 IKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEGVGKFRYPEVPSFLDYVHNRQV 763
+K + + + +L DGDII FQK P + P + +++R
Sbjct: 738 VKPNLTERIQDYDVSLDKALDELMDGDIIVFQKDDPENDSSEL--PTAKEYFRDLYSRVD 795
Query: 764 VHFRSLEKPKEDDFCLEMSKLYTYDDVVERVAQQLGLDDPSKIRLTSHNCYSQQPKPQPI 823
V F P + F + +S Y V + VAQ+L DP ++ Y P P+
Sbjct: 796 VIFCDKTIPNDPGFVVTLSNRMNYFQVAKTVAQRLNT-DPMLLQFFKSQGYRDGPG-NPL 853
Query: 824 KYRGVDHLSDMLIHYN-QTSDVLYYEVLDIPLPELQCLKTLKVAFHHATKDEVSVHTIRL 882
++ L D+L + + LYY+ L + + + + ++ K + ++ E + T+
Sbjct: 854 RHNYEGTLRDLLQFFKPRQPKKLYYQQLKMKITDFENRRSFKCTWLNSQFREEEI-TVYP 912
Query: 883 PKQSTVGDVINDLKTKVELSQP-DAELRLLEVFYHKIYKIFPLNEKIENINDQYW-TLRA 940
K V D++ + K VELS+ +LRLLE+ +KI + +E +E ++ T R
Sbjct: 913 DKHGCVRDLLEECKKVVELSEKGSGKLRLLEIVSYKIIGVHQEDELLECLSPATSRTFRI 972
Query: 941 EEIPEEEKNLGP-HDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQR 999
EEIP + ++ ++ LI V HF KE FG PF L IH+G +E+ RIQ
Sbjct: 973 EEIPLAQVDIDKENEMLITVAHFHKEV------FGTFGIPFLLRIHQGGHFREVMKRIQT 1026
Query: 1000 KLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDVYGAWEQ---YLGLEHSDSAP 1056
L + ++EF K+KFA + +GR YL + + + G +LGL+H + AP
Sbjct: 1027 MLDIQEKEFEKFKFAIVMMGRHTYLNEDEYEVNLKDFEPQPGNMSHPRPWLGLDHFNKAP 1086
Query: 1057 KRAYAANQNRHTY-EKPVKIYN 1077
K +R+TY EK KI+N
Sbjct: 1087 K-------DRYTYLEKAYKIHN 1101
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 398/1128 (35%), Positives = 600/1128 (53%), Gaps = 143/1128 (12%)
Query: 27 NHQPMEVVAQPETANAVENNQP-LDDPPSSRFTWRIENFSRLNTKKHYSEIFIVGGFKWR 85
+ +P+ E N++ +++P L++ + ++W ++NFS L K YS +F G WR
Sbjct: 23 SQEPLRADNYEEIYNSLVHHEPDLEEAAHASYSWVVKNFSTLEDKT-YSPLFKAGHTTWR 81
Query: 86 VLIFPKG-NNVDHLSMYLDVADS----------SSLPYG--------------WSRYAQF 120
+++FPKG N ++ S++L+ + L G +S AQF
Sbjct: 82 IVLFPKGCNQTEYASVFLEYLPQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQF 141
Query: 121 SLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPN----RGYLVNDTLIVE 176
+L++ N + H+F + DWGFT F+ L ++ P +L ND + +
Sbjct: 142 ALSLSNVQDPTVMQINTSHHRFRSEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICIS 201
Query: 177 AEVIVRRVVD--------YWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVY 228
V VR + D + +Y+SKKETGYVGLKNQGATCYMNSLLQ+LF FRK VY
Sbjct: 202 --VTVRVLQDPTGVLWHSFVNYNSKKETGYVGLKNQGATCYMNSLLQSLFFTNIFRKTVY 259
Query: 229 HMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRV 288
+PT +ND S+ ALQ +FY L+ V+T ELT+SFGW+++DSFMQHD+QE NRV
Sbjct: 260 KIPT-DNDDSRDSVAYALQRVFYNLEKQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRV 318
Query: 289 LSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA 348
L + LE KMKGT VE + +F G +Y++CI+V+Y+S+R E F+D+QL+VKG +
Sbjct: 319 LQDNLEKKMKGTEVENALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLED 378
Query: 349 SFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
SF ++VE L GDNKY+AE +GLQDA KG++F P VLQLQLKRF+YD +RD MVKIN
Sbjct: 379 SFRDAIQVETLTGDNKYYAEGHGLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKIN 438
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQW 468
DR+EFPL++DL+ YLS AD+S ++Y LH VLVH G +HGGHYYA I+P W
Sbjct: 439 DRHEFPLEIDLE----PYLSETADKSESHVYVLHGVLVHGGDLHGGHYYALIKPEKDSNW 494
Query: 469 YKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDK 528
+KFDD+RVT+ +K LE+ YGGE G+N PFK ++ NAYMLVY R+S D
Sbjct: 495 FKFDDDRVTRATIKEVLEDNYGGEP--AGRAKGYNGNPFK--RFMNAYMLVYFRKSRLDH 550
Query: 529 IICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKV----------------- 571
I+ V +D+ H+R L +E E K E+ E +Y ++V
Sbjct: 551 ILSPVTAEDVPFHVRNTLDEEHRVVERKLLEREEQQIYRRVRVLTTDGFKKYHGFDMTDF 610
Query: 572 -ARDDD-----------------------LLEQIGKDIYFDLVDHDKVRSFRIQKQIPFN 607
A DDD LL + I L+ + + R+ R+ +
Sbjct: 611 SASDDDPVLITTKIKRNANIWDLQKHLAGLLNRDTSGIRIWLMTNRQNRTVRVDLPLDKK 670
Query: 608 LFKVGQLREVSNKVHNAELKLFLEV--ERGPDLRPIAPPEKTKEDILLFFKLYDPEKEEL 665
V Q+ ++ + + ++++++E E L + D +F K++D E +++
Sbjct: 671 TILVDQICDMHIR-KDMDMRVYVEFLSEHNQLLADFGATDDNDFDTYIFLKIFDYETQQI 729
Query: 666 RYVGRLFVKSTGKPMEYLPK-LNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRAS 724
+ L V S P+ L + + E ++ D I YEEIK + M + ++ +F S
Sbjct: 730 SGLADLHV-SKNSPISSLSEWIREHLKWSSDVPITYYEEIK---TGMVDVLDPNASFEKS 785
Query: 725 QLEDGDIICFQKSTPIEGVGKFRYP--EVPSFLDYVHNRQVVHF--RSLEKPKEDDFCLE 780
+++ GDIICF+K + +P D++ +R V+ F R + F L
Sbjct: 786 EIQVGDIICFEKKLVHDSSSDTSHPYKSALDLYDFMAHRVVITFEPRYSDDTNNGVFDLV 845
Query: 781 MSKLYTYDDVVERVAQQLGLDDPSKIRLTSHNCYSQQPKP---QPIKYRGVDHLSDMLIH 837
++ Y D+ VA +L + DP+ ++ T + S+ P+ P K+ + + H
Sbjct: 846 LTTHTNYTDMARAVANKLNV-DPNYLQFTMAHLPSRTPRSVIRNPSKFTLQNAIPSTYSH 904
Query: 838 YNQTSDVLYYEVLDIPLPELQCLKTLKVAF-----HHATKDEVSVHTIRLPKQSTVGDVI 892
NQ V++YEVLDI L EL+ + ++V F H T+ E V K+ TV D++
Sbjct: 905 -NQNV-VMFYEVLDITLSELERKQLIRVHFLSNGISHETQMEFYV-----DKEGTVEDIL 957
Query: 893 NDLKTKVELSQPDAE-LRLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEIPEEEK-NL 950
+ KV L+ DA LRL EV+ H+I K + I ++N ++ T E P+EE+ L
Sbjct: 958 RQVTQKVPLNAEDASRLRLYEVYNHRILKSHLPTDGIYDLN-EFSTAYVEVTPKEEQMQL 1016
Query: 951 GPHDRL-IHVYHFTKETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKLQVPDEEFA 1009
D + I V HF K+ ++ PF+ V+ GETL+++K R+Q++L D +F+
Sbjct: 1017 KTDDAVSIVVQHFFKDLSRLH------DIPFYFVLLRGETLKDLKKRLQKRLGYNDTQFS 1070
Query: 1010 KWKFAFL---SLGRPEYLQDTDIVSSRFQRRDVYGAWE---QYLGLEH 1051
K K A L S G+P YL D D V +YG E LGL+H
Sbjct: 1071 KVKLAVLQAQSFGKPYYLTDDDEV--------LYGELEPQSHILGLDH 1110
>sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster
GN=Usp7 PE=1 SV=1
Length = 1129
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 385/1081 (35%), Positives = 579/1081 (53%), Gaps = 111/1081 (10%)
Query: 55 SRFTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGW 114
+ F++ +EN +L +++ ++ V WR+++ P N L +L + P W
Sbjct: 102 TTFSFTVENVVQLKSQRLSPPVY-VRMLPWRIMVIP---NDRALGFFLQCNGENDSP-TW 156
Query: 115 SRYAQFSLAV-INQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVNDTL 173
S A L + ++ ++ R +H F ++E+D+G+++F+ EL D + Y+ N+++
Sbjct: 157 SCNAIAELRLKCHKPDAQPFTRARIKHLFYSKENDYGYSNFITWQELKDSEKSYVHNNSI 216
Query: 174 IVEAEVIVRRVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTT 233
+E V+ +DSKK TGYVGLKNQGATCYMNSLLQTL+ R +VY +PT
Sbjct: 217 TLEVHVVADAPHGVL-WDSKKHTGYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPT- 274
Query: 234 ENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKL 293
E D S S+ L+LQ +F++LQ+ D V TK+LTKSFGW+T DSFMQHDVQE RVL +KL
Sbjct: 275 EADDSSKSVGLSLQRVFHELQFGDRPVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKL 334
Query: 294 EDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKY 353
E KMKGT++EGTI LFEG +YI+C NVDY STR E+FYD+QL++K +++Y SF Y
Sbjct: 335 ESKMKGTILEGTIPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQDY 394
Query: 354 VEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEF 413
V E LEGDNKY A +GLQ+A KGV+F FPPVL L L RF+YD + D+ +K NDR+EF
Sbjct: 395 VAPETLEGDNKYDAGVHGLQEASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYNDRFEF 454
Query: 414 PLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDD 473
++LDR + + AD Y LH+VLVHSG HGGHY FI P +W+KFDD
Sbjct: 455 YEHINLDRYLAESENTLAD------YVLHAVLVHSGDNHGGHYVVFINPKADGRWFKFDD 508
Query: 474 ERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNV 533
+ V+ + A+E+ YGG ++ F+ K SNAYMLVYIR+S+ D+++ ++
Sbjct: 509 DVVSSCRKQEAIEQNYGGMDD----EISFH------AKCSNAYMLVYIRQSELDRVLGDI 558
Query: 534 DEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVDHD 593
E +I+ L ERL E+ + ++KE+ EA+ Y + V +++ EQ + ++ D +
Sbjct: 559 TESEISSDLVERLDLEKRIEMARRKERGEANTYVSVHVILEENFEEQHKRRLF----DLE 614
Query: 594 KV--RSFRI-QKQIPFNL-------FKVGQLREVSNKVHNAELKLF-------------- 629
KV R FRI Q Q L F V + R + A+ + F
Sbjct: 615 KVHPRVFRIKQNQTVDELVDLFVRGFGVSRQRMRMWNLCTAQTQKFSHFDFVAEGSRTIE 674
Query: 630 -LEVERGP----------DLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGK 678
+ + P D+ PP K + LLF K YDP + L Y+G T +
Sbjct: 675 QISTSQKPWVIWLQLAWTDVPGPLPPFNPKTESLLFLKYYDPRNKRLNYIGCTQQPHTRR 734
Query: 679 PMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSV-MCEPIEKRCTFRASQLEDGDIICFQKS 737
++ +P +N G+ PD E+ +Y+E + V + EPIE L+ G I+ F++
Sbjct: 735 LIDLVPDVNSKLGFEPDTELTIYDEYADKKLVNLNEPIESALFIPQDHLQ-GHILIFER- 792
Query: 738 TPIEGV-GKFRYPEVPS-FLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDDVVERVA 795
E V K P V FLD V+ +++ F P E DF LE+S Y YD + VA
Sbjct: 793 ---ENVDAKLDLPTVGDYFLDLVYRIEII-FSDKCNPNEPDFTLELSNRYNYDQLANAVA 848
Query: 796 QQLGLDDPSKIR--LTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDV-LYYEVLDI 852
++L DP K++ + +N P ++G + D++ + Q+S ++Y+ L +
Sbjct: 849 ERLNT-DPQKLQFFMCINNYKETAGNAVPYTFKGT--IKDLVSYTKQSSTKRIFYQRLSL 905
Query: 853 PLPELQCLKTLKVAFHHA-TKDEVSVHTIRLPKQSTVGDVINDLKTKVELSQPD-AELRL 910
+ EL K K + + KDE + + K TV ++ + K+ ++ +LRL
Sbjct: 906 SIHELDNKKQFKCVWVSSDLKDEKEL-VLYPNKNDTVKGLLEEAAKKISFAENSRRKLRL 964
Query: 911 LEVFYHKIYKI----FPL------NEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVY 960
L++ HKI + PL NE I T R EE+P E+ L ++ LI V
Sbjct: 965 LKISNHKIVAVCKDDIPLDTLLKSNESITTAQGAQKTFRIEEVPAEDMQLAENEFLIPVA 1024
Query: 961 HFTKETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGR 1020
HF+KE +FG PF +GE +K RIQR+L V D+E+ +KF +S+G
Sbjct: 1025 HFSKEL------YNSFGIPFLTKARQGEPYGALKQRIQRRLNVQDKEWENYKFCVISMGH 1078
Query: 1021 PEYLQDTDIVSSRFQRRDVYGAWEQ----YLGLEHSDSAPKRAYAANQNRHTYEKPVKIY 1076
+ D V +VY +W + GL+H + + KR+ + + EK +KIY
Sbjct: 1079 NADVNDNTPVD-----LEVYRSWTSGQLPFFGLDHINKSRKRS-----SLNFSEKAIKIY 1128
Query: 1077 N 1077
N
Sbjct: 1129 N 1129
>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp5 PE=3 SV=3
Length = 1108
Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust.
Identities = 368/1049 (35%), Positives = 551/1049 (52%), Gaps = 105/1049 (10%)
Query: 56 RFTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGN--NVDHLSMYLDV--ADSSSLP 111
RFTW I+++ L+ ++ S F VG ++++ FP+G + S++L+ ++ L
Sbjct: 57 RFTWHIKSWHELD-RRAVSPQFAVGSRQFKITYFPQGTLQSAGFTSIFLEYIPSEEEKLS 115
Query: 112 YGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELY---DPNRGYL 168
+ QF+ + N SV +F+ DWGFT F L +L P+ +
Sbjct: 116 NKYGCCCQFAFVISNPRKPSLSVANSAHCRFSPEIVDWGFTQFAELKKLLCRQAPDVPPI 175
Query: 169 VND-TLIVEAEVIVRR--VVDYW----SYDSKKETGYVGLKNQGATCYMNSLLQTLFHIP 221
V D L++ A V + + W YDSK TGYVGLKNQGATCYMNSLLQ+L+ I
Sbjct: 176 VEDGALLLTAYVRILKDPTGVLWHSFNDYDSKIATGYVGLKNQGATCYMNSLLQSLYIIH 235
Query: 222 YFRKAVYHMPTTENDMPSG--SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQ 279
FR+ VY +PT D P G SI ALQ FY LQ+ + V+T ELTKSFGWD+ DSFMQ
Sbjct: 236 AFRRIVYQIPT---DSPQGKDSIAYALQRCFYNLQFMNEPVSTTELTKSFGWDSLDSFMQ 292
Query: 280 HDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLD 339
HDVQE NRVL + LE M+ T VE + LF G +YI C+NV+++S R E ++D+QL+
Sbjct: 293 HDVQEFNRVLQDNLERSMRDTKVENALTNLFVGKMKSYIACVNVNFESARSEDYWDIQLN 352
Query: 340 VKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 399
VKG +++ SF Y++VE LEGDN Y A+ YG Q+AKKGV+F FPP+L LQLKRFEYDF
Sbjct: 353 VKGMKNLEDSFRSYIQVETLEGDNCYFADTYGFQEAKKGVIFESFPPILHLQLKRFEYDF 412
Query: 400 MRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAF 459
RD M+KINDRYEFPL+ D +LSP+AD+S Y L+ VLVHSG +H GHYYA
Sbjct: 413 ERDMMIKINDRYEFPLEFDAK----AFLSPEADQSQNCEYVLYGVLVHSGDLHNGHYYAL 468
Query: 460 IRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLV 519
++ WYK+DD RVT+ L+ LEE YGG+ + +P F +P K ++ +AYML+
Sbjct: 469 LKTEKDGPWYKYDDTRVTRATLREVLEENYGGDYIM---HPPF-RSPVKLKRFMSAYMLL 524
Query: 520 YIRESDKDKIICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLE 579
Y+R+ D+++ V +I EHL+E L + E ++KE+ E+HLYT +++ + E
Sbjct: 525 YLRKDKLDELMNPVSADEIPEHLKEALNPSIQLAELRRKERLESHLYTKVQLITPEFYSE 584
Query: 580 QIGKDI--YFDLVDHDKVRSFRIQKQIPFNLF------KVGQLREVSN-----KVHNAE- 625
DI + + + + FRI+K+ F+ F K+G +E K HN
Sbjct: 585 HHEFDIADFGNAYKEETIPQFRIKKEAKFSEFIPIVAEKLGYPQECMRFWYVVKRHNCTV 644
Query: 626 --------------------------LKLFLEVERGPDLRPIAPPEKTKE-DILLFFKLY 658
L+L+LE+ +L + T E + +F K +
Sbjct: 645 RVESPVNELNSTMEEVKNVWNSQGEILRLYLEITPENELSSSLTHQNTGEWNAFIFVKYF 704
Query: 659 DPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKR 718
D + +E+ G L V + + P L E A + +++YEEIK P M + +
Sbjct: 705 DRKSQEISGCGTLHVNKSDEIRSICPLLCERANLPKNTPLNIYEEIK--PG-MVDFLRLE 761
Query: 719 CTFRASQLEDGDIICFQKSTPI---EGVGKFRYPEVPSFLDYVHNRQVVHFRS--LEKPK 773
TF S+L GDIICF+ P + + + D++ N+ +V FR +++
Sbjct: 762 KTFTQSELSTGDIICFEPCRPSALEDDIVNSGFDSALKLYDFLSNKVLVLFRPRFIDQDS 821
Query: 774 EDDFCLEMSKLYTYDDVVERVAQQLGLDDPSKIRLTSHN--CYSQQ---PKPQPIKYRGV 828
+F + + + YDD+ + Q+LG+ IRLT+ N YS P I +
Sbjct: 822 IIEFEMLLDRRIKYDDLCIELGQKLGI-GADHIRLTTCNPLTYSAGMVVPNDSNITLYEI 880
Query: 829 DHLSDMLIHYNQTSDVLYYEVLDIPLPELQCLKTLKVAFHHATKDEVSVHTIRLPKQSTV 888
+ S+ S+V++YE +D+ L +L + +++ + + + + K
Sbjct: 881 LYSSEE----EMPSNVIFYETMDVSLSDLDRKRLVRLRWLVDGLANIELVEAYINKS--- 933
Query: 889 GDVINDLKTKVELSQPDAEL-----RLLEVFYHKIYKIFPLNEKIENINDQYWTLRAEEI 943
GD INDL V PD++L R+ EVF + ++ L I IN TL E +
Sbjct: 934 GD-INDLFGAVCERFPDSDLRKKKVRVYEVFESRYHRDLSLRTLIRTINPAA-TLVGEVV 991
Query: 944 PEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKLQV 1003
P ++ L P ++++ V+HF K+ A+ G PF VI E + K+R+ + Q
Sbjct: 992 PLDQLQLYPEEKIVQVHHFHKDIARIH------GIPFSFVIKPQEKFIDTKLRLAARTQY 1045
Query: 1004 PDEEFAKWKFAFLSL--GRPEYLQDTDIV 1030
P+ F+ KF + R YL D DI
Sbjct: 1046 PESIFSVIKFCVVDFDNNRVVYLNDEDIT 1074
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 250/572 (43%), Positives = 366/572 (63%), Gaps = 36/572 (6%)
Query: 57 FTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYL--------DVADSS 108
FTW I +++ L K+ S F +G F+W +L+FP+GN+ +++YL D
Sbjct: 42 FTWNIPDWNELTNPKYNSPRFRIGDFEWDILLFPQGNHNKGVAVYLEPHPEEKLDETTGE 101
Query: 109 SLPYG--WSRYAQFSLAVINQIHS-KYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNR 165
+P W AQF++ + + ++ + H+FNA ++DWGF + + L L P++
Sbjct: 102 MVPVDPDWYCCAQFAIGISRPGNGDTINLINKSHHRFNALDTDWGFANLIDLNNLKHPSK 161
Query: 166 G----YLVNDTLIVEAEVIVRR----VV--DYWSYDSKKETGYVGLKNQGATCYMNSLLQ 215
G +L TL + A V + + V+ ++ +YDSKK TGYVG +NQGATCY+NSLLQ
Sbjct: 162 GRPLSFLNEGTLNITAYVRILKDPTGVLWHNFLNYDSKKVTGYVGFRNQGATCYLNSLLQ 221
Query: 216 TLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYD 275
+ F YFRK VY +PT E++ P+ S+PLALQ FY+LQ SD + T ELT+SFGWDT +
Sbjct: 222 SYFFTKYFRKLVYEIPT-EHESPNNSVPLALQRAFYQLQVSDIPLDTLELTRSFGWDTAE 280
Query: 276 SFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYD 335
SF QHDVQELNR+L ++LE+ MKGT VEG + ++F G +YI+CINVDY+S R E F+D
Sbjct: 281 SFTQHDVQELNRILMDRLENNMKGTPVEGKLNEIFVGKMKSYIKCINVDYESARVEDFWD 340
Query: 336 LQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRF 395
LQL+VK +++ SFD Y+E+E + G+N+Y A+ YGLQDA+KGV+F FPPVL LQLKRF
Sbjct: 341 LQLNVKNFKNLQESFDNYIEMELMNGENQYAAQDYGLQDAQKGVIFESFPPVLHLQLKRF 400
Query: 396 EYDFMRDTMVKINDRYEFPLQLDL----DRENGKYLSPDADRSVRN--LYTLHSVLVHSG 449
EYDF D MVK+ND+YEFP +DL D++ K + D++ +N +Y LH VLVHSG
Sbjct: 401 EYDFNYDQMVKVNDKYEFPETIDLSPFVDKDVLKK-TLDSENKDKNPYVYNLHGVLVHSG 459
Query: 450 GVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGE---EELPQTNPGFNNTP 506
+ GHYY I+P + DQWY+FDDERV + K+ +E +G + +E +T
Sbjct: 460 DISTGHYYTLIKPGVEDQWYRFDDERVWRVTKKQVFQENFGCDRLPDEKVRTMTRGEYQN 519
Query: 507 FKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHLRERLKKEQEEKEHKKKEKAEAHLY 566
+ ++++AYMLVYIR+ ++ ++ V E D+ +H+ R+++E +E+E K+KE EAHLY
Sbjct: 520 YIIQRHTSAYMLVYIRQEQEEDLLRPVLESDVPKHVITRVREEIKERETKEKEIREAHLY 579
Query: 567 TVIKVARDDDLLEQIGKDIYFDLVDHDKVRSF 598
+++ + + G FD HD R F
Sbjct: 580 VTLRLHSIKEFIHYEG----FDYFAHDGFRLF 607
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 33/230 (14%)
Query: 652 LLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPD-----EEIDLYEEIKF 706
LLF K YDP ++L G V L +L++++ D E++ YEE+
Sbjct: 774 LLFVKSYDPHTQKLLGFGHFAVNQ-------LQQLSDISAIIEDSISSNEKLTFYEEV-- 824
Query: 707 EPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEGVGKFRYPEVPSFLDYVHNRQVVHF 766
+P + E K + A ++ GDI+ F+ + Y + F Y+ R + F
Sbjct: 825 QPGTINEIYMKETIYDAD-IDTGDIVSFEVPGAVLPDTFPVYATIKDFYSYLRYRVKLKF 883
Query: 767 RSLEKPKED---------DFCLEMSKLYTYDDVVERVAQQLGLDDPSKIRLTSHNCYSQQ 817
+ E+ F +S YDD+ V++ + P +++ + YS
Sbjct: 884 SKFDGSSEEYGVSNEIPESFEFWISAYAPYDDLARMVSKYAHVK-PEYLKIIA--LYSNG 940
Query: 818 PKPQPIKYRGVDHLSDMLIHYNQTSDV--LYYEVLDIPLPELQCLKTLKV 865
+ L+D L+ + +EVL +PL EL+ L+ +K+
Sbjct: 941 R----FVLKSTSLLNDYLLKDFNCDQIPPFAFEVLSVPLKELERLRPIKL 986
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 337 bits (865), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 313/589 (53%), Gaps = 64/589 (10%)
Query: 37 PETANAVENNQPLDDP------PSSRFTWRIENFSRLNTK---KHYSEIFIVGGFKWRVL 87
PE + + N+ P D P IE FS K + S+ IV G WR+L
Sbjct: 6 PEDMHILTNDIPSFDKSLDPYGPEGHLALDIERFSSFMNKPDSRIMSKPVIVRGIPWRIL 65
Query: 88 IF------------PKGNNVDHLSMYLDVADSSSLPYG--WSRYAQFSLAVINQIHSKYS 133
+ N + +L + L W Y Q +L V+N +
Sbjct: 66 AICRHQQNNRQVATSRSRNNYNFGFFLQCNNDDLLQKRGMWRCYGQATLEVLNA--NGPP 123
Query: 134 VRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEVI--VRRVVDYWSYD 191
++K H F+ E DWGF+++ L P GY+++D + + V +Y +D
Sbjct: 124 IQKKIHHSFHNTEVDWGFSNYDQYDTLTSPKDGYVIDDVIRLRCRFTADVPTGANYM-WD 182
Query: 192 SKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFY 251
SKK TG +GL+NQGATCYMNS+LQ+ + FR+AVY+M S +I LA+Q +FY
Sbjct: 183 SKKHTGCIGLRNQGATCYMNSILQSFYFTTGFRRAVYNMEVGTEPNES-NIVLAMQRVFY 241
Query: 252 KLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFE 311
+LQ S +V T LT++FGWD D+F QHDVQE RVL + LE KMKGT E +I LF
Sbjct: 242 ELQMSSEAVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFR 301
Query: 312 GHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYG 371
G+ +YI+C++VDY+S+R ESFYD+QL+V G + +FD Y E L+ DNKY A +G
Sbjct: 302 GNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFDAYTTPETLDDDNKYDAGDHG 361
Query: 372 LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDA 431
LQ A+KGV F++ PPVL +QL RF+Y + KIN+R+ FP +++L N L P
Sbjct: 362 LQRAEKGVKFVELPPVLHVQLMRFQYCGVEQ---KINERFSFPEKMNL--SNCCELGPML 416
Query: 432 DRSVRNLYTLHSVLVHSGGVHGGHYYAFIR---------PTLSDQWYKFDDERVTKEDLK 482
+ +Y+LH+VLVHSG HGGHY +I PT + +W KFDD+ V++
Sbjct: 417 NEE-DCVYSLHAVLVHSGEFHGGHYVTYINVNLHESAVDPTATAKWCKFDDDVVSRTTTD 475
Query: 483 RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHL 542
A+ +GGE+ + S+AYMLVY+R++ D+++ + + I + +
Sbjct: 476 DAIVSNFGGEKAMN----------------SSAYMLVYVRDNAIDQVLAPIPDTQIPQSV 519
Query: 543 RERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVD 591
+ E+ + +KK++ E + I + D L + FDL++
Sbjct: 520 SRTFEMERMHRNREKKKQEEEQMCMSITLVTPDIL----ATNHSFDLIE 564
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 193/474 (40%), Gaps = 50/474 (10%)
Query: 632 VERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAG 691
VE L+P+ T+ DIL F K YD ++ +G + + S + Y ++ G
Sbjct: 678 VEHSQFLQPLNEYLPTR-DILFFLKYYDAITDKFTIIGHVTLDSHKRLNLYRMTFCDLLG 736
Query: 692 YAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPI-EGVGKFRYPE 750
D E+ Y E + + R +DG I+ +K+ P + K + E
Sbjct: 737 LPKDTELKYYIEHAPNHVEQIDDPNRSTISRLVDDQDGAIVIVEKADPTAKKDAKTKMIE 796
Query: 751 VPSFLDYVHNRQVVHFRSLEKPKE---DDFCLEMSKLYTYDDVVERVAQQLGLDDPSKIR 807
+ + +++ ++Q E+P E FCLE DV E + +L + DP +
Sbjct: 797 LYNDVEFEFSQQFYSKMPNEEPFELFTKRFCLEQK----LTDVTEFIGSELNV-DPRNVM 851
Query: 808 LTSHNCYSQ-QPKPQPIKYRGVD--HLSDMLIH--YNQTSDVLYYEVLDIPLPELQCLKT 862
L + S+ +P G+ +L+ +H + Y + P+ E+ +
Sbjct: 852 LWTRVSGSRFEPNFDDYAVTGIQCKYLTLRTLHDPRQHKKYSVSYAIFPFPVNEVHTTRM 911
Query: 863 LKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKV-ELSQPDAELRLLEVFY-----H 916
+ V + PK TV D+I + K + + RLL++
Sbjct: 912 FVRLYRQMPNGNVEELNLFPPKDGTVTDLIAEAKRYYPSVEGGSGKFRLLQIGTSPLNNQ 971
Query: 917 KIYKIFPLNEKIENINDQ---------YWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETA 967
++++I+ N I +++ + R EEIP +E ++ + V H+ +E
Sbjct: 972 RVFQIYNENTAIVDLDQRPVYKQQAQHTLNCRIEEIPHDELDVAQGEFFCPVVHYDREPT 1031
Query: 968 QNQMQIQNFGEPFFLVIHEGETLQEIKVRIQRKL-QVPDEEFAKWKFAFLS---LGRPEY 1023
+ FG F + I GE + +++ R++RKL V D EFAK+KFA LS L R
Sbjct: 1032 ------KLFGVSFVIKIRNGELMTDVRDRLRRKLPDVSDAEFAKYKFALLSRDKLCRNIE 1085
Query: 1024 LQDTDIVSSRFQRRDVYGAWEQYLGLEHSDSAPKRAYAANQNRHTYEKPVKIYN 1077
+ V+ G + Y+GL+H + +H+ E ++I N
Sbjct: 1086 FNAGEKVNLMDMANQTTGVPQVYIGLDHKSPS----------QHSNEAAIRILN 1129
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 335 bits (860), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 312/579 (53%), Gaps = 67/579 (11%)
Query: 51 DP--PSSRFTWRIENFSRLNTK---KHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYLDVA 105
DP P + I+ FS+ ++ + S+ IV G WR+L + SM V
Sbjct: 26 DPFGPEGHLSLDIDCFSKFMSRSDNRIMSKPIIVRGIPWRILAICRNQQGSRHSMNSRV- 84
Query: 106 DSSSLPYG----------------WSRYAQFSLAVINQIHSKYSVRKDTQHQFNARESDW 149
+ S+ +G W Y L V+N S++K H F+ E DW
Sbjct: 85 NRSNFNFGFFLQCNNDELLQKRGMWRCYGTAVLEVLNA--DGPSIQKKIHHSFHNTEVDW 142
Query: 150 GFTSFMPLGELYDPNRGYLVNDTLIVEAEVI--VRRVVDYWSYDSKKETGYVGLKNQGAT 207
GF+++ L +P GY+VNDT+ + V +Y +DSK+ TG +GL+NQGAT
Sbjct: 143 GFSNYDQYDTLCNPKDGYVVNDTIKLRCRFTADVPTGANYM-WDSKRHTGCIGLRNQGAT 201
Query: 208 CYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDSSVATKELTK 267
CYMNS+LQ+ + FR+AVY+M S +I LA+Q +FY+LQ + +V T LT+
Sbjct: 202 CYMNSILQSFYFTTGFRRAVYNMDVGTEPNES-NIVLAMQRVFYELQMASEAVETNSLTR 260
Query: 268 SFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKS 327
+FGWD D+F QHDVQE RVL + LE KMKGT E +I LF G+ +YI+C++VDY+S
Sbjct: 261 AFGWDKLDAFNQHDVQEFCRVLLDNLETKMKGTSEEKSIPNLFRGNMKSYIKCLDVDYES 320
Query: 328 TRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPV 387
+R ESFYD+QL+V G + +F+ Y E L+ +NKY A +GLQ A+KGV F++ PP+
Sbjct: 321 SRTESFYDVQLNVLGMDSLERAFEAYTTSEILDDENKYDAGDHGLQRAEKGVKFVELPPI 380
Query: 388 LQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR--ENGKYLSPDADRSVRNLYTLHSVL 445
L +QL RF+Y + KIN+R+ FP +++L E G L+ + +Y+LH+VL
Sbjct: 381 LHVQLMRFQYCGVEQ---KINERFSFPEKMNLASCCELGPMLTEED-----CVYSLHAVL 432
Query: 446 VHSGGVHGGHYYAFIR---------PTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELP 496
VHSG HGGHY +I PT S +W KFDD+ V++ A+ +GGE+
Sbjct: 433 VHSGEFHGGHYVTYINVNLHESAVDPTSSAKWCKFDDDVVSRTTTDDAIVSNFGGEK--- 489
Query: 497 QTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHLRERLKKEQEEKEHK 556
T S+AYMLVY+R++ D+ + + + I + + + E+ + +
Sbjct: 490 -------------TMNSSAYMLVYVRDNAIDQFLAPIPDSQIPQSVSRTFEMERLHRNRE 536
Query: 557 KKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKV 595
KK+ E L I + D + + FDLVD V
Sbjct: 537 KKKLEEEQLCMGIVLVTPD----IVASNHSFDLVDQSIV 571
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 190/470 (40%), Gaps = 55/470 (11%)
Query: 639 RPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKPMEYLPKLNEMAGYAPDEEI 698
RP+ + T D+L F K YD ++ +G + Y L EM G D E+
Sbjct: 690 RPLCEYD-TARDLLFFVKYYDTMTDKFTIIGHTMFDCHKRFNLYRSMLCEMIGLPADTEL 748
Query: 699 DLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTPIEGVGKFRYPEVPSFLDYV 758
Y E + + + R + +DG I+ +K + FLD V
Sbjct: 749 KYYMEHAASYLELVDLTQNYSIGRLVEEQDGGILVVEKVETSTSTQNAKQKMNELFLD-V 807
Query: 759 HNRQVVHFRSLEKPKEDDF-------CLEMSKLYTYDDVVERVAQQLGLDDPSKIRLTSH 811
V F + +KP+E+ F CL+ KL+T V E + +L + DP K+ + +
Sbjct: 808 EVEFVQSFYN-KKPEEEPFEQFVKRICLD-DKLFT---VAEEIGARLNV-DPKKVLIWTR 861
Query: 812 NCYSQ-QPKPQPIKYRGVDHLSDMLIHYNQTSD--VLYYEVLDIPLPELQCLKTLKVAFH 868
S+ +P L +H + + Y ++ + E+ + F
Sbjct: 862 VSGSRFEPFFDDYMLNTCKGLMTRPVHDPRAYKRYRVQYAIMPFDIDEISKHRIQTKLFW 921
Query: 869 HATKDEVSVHTIRLPKQSTVGDVINDLKTKVELSQ-PDAELRLLEVFY-----HKIYKIF 922
V T+ K+ TV D+IN+ K + + RLL++ ++Y+I+
Sbjct: 922 QLPNGHVEELTLFPLKEGTVIDIINEAKRYYPFVEGGSGKFRLLQIGAPPLSNQRVYQIY 981
Query: 923 PLNEKIEN---------INDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQI 973
N I + ++ Q R EE+P +E ++ P + L V HF +E
Sbjct: 982 GENTLISDLDQRTMYKLVSSQALHCRLEEVPIDELDMSPGEFLCPVVHFDREPT------ 1035
Query: 974 QNFGEPFFLVIHEGETLQEIKVRIQRKLQ-VPDEEFAKWKFAFLS-----LGRPEYLQDT 1027
+ FG F + I E + E++ R++RKL V D +FAK+KFA LS L R +
Sbjct: 1036 KLFGLSFVIKIRNNELMTEVRDRLRRKLNDVSDADFAKYKFALLSRDKLQLCRTIEFNNG 1095
Query: 1028 DIVSSRFQRRDVYGAWEQYLGLEHSDSAPKRAYAANQNRHTYEKPVKIYN 1077
+ V+ G + Y+GL+H +H+ E ++I N
Sbjct: 1096 EKVNLADMANQTTGVPQVYIGLDHKSPI----------QHSSEAAIRILN 1135
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 213/387 (55%), Gaps = 71/387 (18%)
Query: 195 ETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDM-PSGSIPLALQSLFYKL 253
+TGYVGL NQ TCY+NSLLQTLF P FR A+Y E++ P SIP LQ LF L
Sbjct: 169 DTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLL 228
Query: 254 QYSDS-SVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEG 312
Q S ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 229 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 288
Query: 313 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 366
+Y++C+ Y+S R ++F D+ L ++ G + S ++ +++ E L+G N+Y
Sbjct: 289 KLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPETLDGPNQYF 348
Query: 367 AEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL------ 419
E+ + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 349 CERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDM 408
Query: 420 ------------------------DRENGKYLSPDA----------------DRSV---R 436
D+ + + + DA ++SV
Sbjct: 409 EDEKSPQTDSCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVAEKN 468
Query: 437 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDLKRALEEQYGGEE 493
+LY L SV+VHSG GGHYYA I+ QWY F+D+ R+T+ED+K+ YGG
Sbjct: 469 SLYELFSVMVHSGSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKT----YGG-- 522
Query: 494 ELPQTNPGFNNTPFKFTKYSNAYMLVY 520
N G+ ++ F + +NAYML+Y
Sbjct: 523 --ATGNRGYYSSAFASS--TNAYMLMY 545
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 213/387 (55%), Gaps = 71/387 (18%)
Query: 195 ETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDM-PSGSIPLALQSLFYKL 253
+TGYVGL NQ TCY+NSLLQTLF P FR A+Y E++ P SIP LQ LF L
Sbjct: 170 DTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPYQLQRLFVLL 229
Query: 254 QYSDS-SVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEG 312
Q S ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 230 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 289
Query: 313 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 366
+Y++C+ Y+S R ++F D+ L ++ G + S ++ +++ E L+G N+Y
Sbjct: 290 KLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPETLDGPNQYF 349
Query: 367 AEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL------ 419
E+ + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 350 CERCKRKCDARKGLKFLHFPYLLTLQLKRFDFDYTSMHRIKLNDRMTFPDELDMSPFIDV 409
Query: 420 ------------------------DRENGKYLSPDA----------------DRSV---R 436
D+ + + + DA ++SV
Sbjct: 410 EDEKSPQTDSCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLETNSNIEKLNKSVSEKN 469
Query: 437 NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDLKRALEEQYGGEE 493
+LY L SV+VHSG GGHYYA I+ QWY F+D+ R+T+ED+K+ YGG
Sbjct: 470 SLYELFSVMVHSGSAAGGHYYACIKSFADGQWYSFNDQHVSRITQEDIKKT----YGGS- 524
Query: 494 ELPQTNPGFNNTPFKFTKYSNAYMLVY 520
N G+ ++ F + +NAYML+Y
Sbjct: 525 ---TGNRGYYSSAFASS--TNAYMLMY 546
>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus GN=Usp47
PE=1 SV=2
Length = 1376
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 233/438 (53%), Gaps = 77/438 (17%)
Query: 187 YWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVY--HMPTTENDMPSGSIPL 244
Y S +K ETGYVGL NQ TCY+NSLLQTLF P FR A+Y +E D P SIP
Sbjct: 176 YSSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEDSEED-PVTSIPY 234
Query: 245 ALQSLFYKLQYSDS-SVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVE 303
LQ LF LQ S ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T
Sbjct: 235 QLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQA 294
Query: 304 GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVE 357
I +L++G +Y+ C+ Y+ R +++ D+ L ++ G +AS ++ +++ E
Sbjct: 295 DLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPE 354
Query: 358 RLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQ 416
L+G N+Y E+ + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +
Sbjct: 355 ILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEE 414
Query: 417 LDL------------------------------DRENGKYLSPDA-DRSV---------- 435
LD+ D+ + + + DA D +
Sbjct: 415 LDMSTFIDIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLESSSGSEK 474
Query: 436 -------RN--LYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDLKR 483
+N +Y L SV+VHSG GGHYYA I+ DQWY F+D+ R+T+ED+K+
Sbjct: 475 ISKPGLEKNSLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKK 534
Query: 484 ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVY-IRESDKDKIICNVDEQDIAEHL 542
G F +NAYML+Y +++ ++ VDE EH+
Sbjct: 535 THGGSSGSRGYYSSA----------FASSTNAYMLIYRLKDPTRNAKFLEVDE--YPEHI 582
Query: 543 RERLKKEQEEKEHKKKEK 560
+ ++KE+E +E +K+++
Sbjct: 583 KNLVQKERELEEQEKRQR 600
>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47
PE=1 SV=3
Length = 1375
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 227/432 (52%), Gaps = 75/432 (17%)
Query: 192 SKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDM-PSGSIPLALQSLF 250
+K ETGYVGL NQ TCY+NSLLQTLF P FR A+Y E++ P SIP LQ LF
Sbjct: 181 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF 240
Query: 251 YKLQYSDS-SVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQL 309
LQ S ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I +L
Sbjct: 241 VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL 300
Query: 310 FEGHHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDN 363
++G +Y+ C+ Y+ R +++ D+ L ++ G +AS ++ +++ E L+G N
Sbjct: 301 YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN 360
Query: 364 KYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL--- 419
+Y E+ + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+
Sbjct: 361 QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF 420
Query: 420 -DRENGKYLSPDA--DRSVRNLYTLH---------------------------------- 442
D E+ K ++ D N + H
Sbjct: 421 IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLETNSGTEKISKSGL 480
Query: 443 ----------SVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDLKRALEEQY 489
SV+VHSG GGHYYA I+ +QWY F+D+ R+T+ED+K+
Sbjct: 481 EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTHGGSS 540
Query: 490 GGEEELPQTNPGFNNTPFKFTKYSNAYMLVY-IRESDKDKIICNVDEQDIAEHLRERLKK 548
G F +NAYML+Y +++ ++ VDE EH++ ++K
Sbjct: 541 GSRGYYSSA----------FASSTNAYMLIYRLKDPARNAKFLEVDE--YPEHIKNLVQK 588
Query: 549 EQEEKEHKKKEK 560
E+E +E +K+++
Sbjct: 589 ERELEEQEKRQR 600
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 224/428 (52%), Gaps = 73/428 (17%)
Query: 195 ETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDM-PSGSIPLALQSLFYKL 253
ETGYVGL NQ TCY+NSLLQTLF P FR A+Y E++ P SIP LQ LF L
Sbjct: 183 ETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLL 242
Query: 254 QYSDS-SVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEG 312
Q S ++ T ++T+SFGWD+ +++ QHDVQEL RV+ + LE K K T I QL++G
Sbjct: 243 QTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQG 302
Query: 313 HHMNYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYH 366
+Y+ C+ Y+ R +++ D+ L ++ G +AS ++ +++ E L+G N+Y
Sbjct: 303 KLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQYF 362
Query: 367 AEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL----DR 421
E+ + DA+KG+ F+ FP +L LQLKRF++D+ +K+NDR FP +LD+ D
Sbjct: 363 CERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIFIDV 422
Query: 422 ENGKYLSPDA--DRSVRNLYTLH------------------------------------- 442
E+ K ++ D N + H
Sbjct: 423 EDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERIAKVGSEKN 482
Query: 443 -------SVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDE---RVTKEDLKRALEEQYGGE 492
SV+VHSG GGHYYA I+ DQWY F+D+ ++T+ED+K+ G
Sbjct: 483 SLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSR 542
Query: 493 EELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAEHLRERLKKEQEE 552
F +NAYML+Y R D + ++ + +H+++ ++KE+E
Sbjct: 543 GYYSSA----------FASSTNAYMLIY-RLKDPARNAKFLESHEYPDHIKQLVQKEREL 591
Query: 553 KEHKKKEK 560
+E +K+++
Sbjct: 592 EEQEKRQR 599
>sp|Q24574|UBPE_DROME Ubiquitin carboxyl-terminal hydrolase 64E OS=Drosophila
melanogaster GN=Ubp64E PE=1 SV=2
Length = 1556
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 213/434 (49%), Gaps = 90/434 (20%)
Query: 197 GYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYS 256
GYVGL NQ TCY+NSLLQ LF P FR A+Y +ND + +IP LQ LF LQ S
Sbjct: 394 GYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRW-EFDNDNEAKNIPYQLQKLFLNLQTS 452
Query: 257 -DSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHM 315
++V T +LT+SFGWD+ +++ QHD+QEL RV+ + LE K K T I L+EG
Sbjct: 453 PKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMN 512
Query: 316 NYIECINVDYKSTRKESFYDLQLDVK--GCRDVYASFDK----YVEVERLEGDNKYHAEQ 369
+Y++C+ + + TR+++F D+ L V+ G Y S ++ +V+ E L+G+N+Y E+
Sbjct: 513 DYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEK 572
Query: 370 YGLQ-DAKKGVLF-----------------------------IDFPPVLQLQL------- 392
+ DA KG+ F + FP L L
Sbjct: 573 CKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGN 632
Query: 393 ---------------------KRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDA 431
E D + +V + L+ D + G +S
Sbjct: 633 SGEQNSQLNGTVDDCSTADSGSAMEDDNLSSGVVTTASSSQHENDLN-DEDEGIDMSSST 691
Query: 432 DRSVRN-----LYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERV---TKEDLKR 483
+S + LY L ++++HSG GGHYYA+I+ +++W+ F+D+ V T+ED++R
Sbjct: 692 SKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIKDFDNNEWFCFNDQNVTSITQEDIQR 751
Query: 484 ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIR-ESDKDKIICNVDEQDIAEHL 542
+ +GG P + +T +NAYML+Y + ++ +++++ V D EH+
Sbjct: 752 S----FGG--------PNGSYYSSAYTSSTNAYMLMYRQVDAKRNELVAKV--ADFPEHI 797
Query: 543 RERLKKEQEEKEHK 556
+ L K E+E +
Sbjct: 798 KTLLPKLHSEEETR 811
>sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40
PE=2 SV=3
Length = 1235
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 146/282 (51%), Gaps = 24/282 (8%)
Query: 196 TGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTE------NDMPSGS---IPLAL 246
T G++NQG TCY+NSLLQTL P FR+A++ + E D P IPL L
Sbjct: 38 TNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQL 97
Query: 247 QSLFYKLQYSDSSVA-TKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGT 305
Q LF +L D A T +LT SFGW + + QHDVQELNR+L LE + GT
Sbjct: 98 QRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDL 157
Query: 306 IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVY-ASFDKYVEVERLEGDNK 364
I +L+ G +N I C S R+E F DL + VK + A ++ YVE E + DN
Sbjct: 158 IYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNL 217
Query: 365 YHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREN 423
YH L A K PP L + L RF +DF++ K Y FPL+++
Sbjct: 218 YHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRIN----- 272
Query: 424 GKYLSPDADRS----VRNLYTLHSVLVHSGGVHGGHYYAFIR 461
L P ++S + +Y L SV++H GG +GGHY+ +I+
Sbjct: 273 ---LKPFCEQSELDDLEYIYDLFSVIIHKGGCYGGHYHVYIK 311
>sp|Q8BWR4|UBP40_MOUSE Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus GN=Usp40
PE=1 SV=2
Length = 1235
Score = 163 bits (413), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 143/282 (50%), Gaps = 24/282 (8%)
Query: 196 TGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTE------NDMPSGS---IPLAL 246
T G++NQG TCY++SLLQTL P FR+A++ + E D P IPL L
Sbjct: 38 TNLSGIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQL 97
Query: 247 QSLFYKLQYSDSSVA-TKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGT 305
Q LF +L D A T +LT SFGW + QHDVQELNR+L LE + GT
Sbjct: 98 QRLFAQLLLLDQEAASTIDLTDSFGWTNDEEMRQHDVQELNRILFSALETSLVGTSGHDL 157
Query: 306 IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASF-DKYVEVERLEGDNK 364
I +L+ G +N I C S R+E F DL + VK + + YVE E + DN
Sbjct: 158 IHRLYHGTIVNQIVCKECKNISERQEDFLDLTVAVKNVSGLEDELCNMYVEEEIFDYDNL 217
Query: 365 YHAEQYG-LQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREN 423
YH L A K PP L + L RF +DF++ K Y FPL+++
Sbjct: 218 YHCGTCDRLVKAAKSAKLRKLPPFLTISLLRFNFDFVKCERYKDTSCYTFPLRIN----- 272
Query: 424 GKYLSPDADRS----VRNLYTLHSVLVHSGGVHGGHYYAFIR 461
L P ++S + +Y L SV++H GG +GGHY+ +I+
Sbjct: 273 ---LKPFCEQSELDDMEYMYDLFSVIIHKGGCYGGHYHVYIK 311
>sp|Q3V0C5|UBP48_MOUSE Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus GN=Usp48
PE=1 SV=2
Length = 1052
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/356 (32%), Positives = 171/356 (48%), Gaps = 33/356 (9%)
Query: 185 VDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSG---- 240
+D + + +K+ +VGL N GATCY+N+ LQ F R+A+Y P+T +D G
Sbjct: 75 IDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIH 134
Query: 241 --------SIPLALQSLFYKLQYSDSS-VATKELTKSFGWDTYDSFMQHDVQELNRVLSE 291
+I LQ LF LQ S+ + K+ G DT Q D QE +++
Sbjct: 135 GGKDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMS 191
Query: 292 KLED---KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA 348
LED K K V +QQ F G + C +S FY+L+L+++G + +
Sbjct: 192 LLEDTLSKQKNPDVRNVVQQQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGHKQLTD 251
Query: 349 SFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
++++ ERLEGDN+Y E Q+A + + + P L LQL RF +D K+
Sbjct: 252 CISEFLKEERLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKL 311
Query: 408 NDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSD 466
N F LD++ Y+ V Y L +VL+H G + GHY A ++ S
Sbjct: 312 NAYIGFSESLDME----PYVEHKGGSFV---YELSAVLIHRGVSAYSGHYIAHVKDPQSG 364
Query: 467 QWYKFDDERVTKEDLKRALEEQYGGEEEL-PQTNPGFNNTPFKFTKYS-NAYMLVY 520
+WYKF+DE + K + K+ Q G EE+L P + K T S NAYMLVY
Sbjct: 365 EWYKFNDEDIEKMEGKKL---QLGIEEDLEPSKSQTRKPKCGKGTHCSRNAYMLVY 417
>sp|Q86UV5|UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48
PE=1 SV=1
Length = 1035
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 173/361 (47%), Gaps = 42/361 (11%)
Query: 185 VDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSG---- 240
+D + + +K+ +VGL N GATCY+N+ LQ F R+A+Y P+T +D G
Sbjct: 75 IDDPNCERRKKNSFVGLTNLGATCYVNTFLQVWFLNLELRQALYLCPSTCSDYMLGDGIQ 134
Query: 241 --------SIPLALQSLFYKLQYSDSS-VATKELTKSFGWDTYDSFMQHDVQELNRVLSE 291
+I LQ LF LQ S+ + K+ G DT Q D QE +++
Sbjct: 135 EEKDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMS 191
Query: 292 KLED---KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA 348
LED K K V +QQ F G + C +S FY+L+L+++G + +
Sbjct: 192 LLEDTLSKQKNPDVRNIVQQQFCGEYAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTD 251
Query: 349 SFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
++++ E+LEGDN+Y E Q+A + + + P L LQL RF +D K+
Sbjct: 252 CISEFLKEEKLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKL 311
Query: 408 NDRYEFPLQLDL----DRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRP 462
N F LD+ + + G Y +Y L +VL+H G + GHY A ++
Sbjct: 312 NTYIGFSEILDMEPYVEHKGGSY-----------VYELSAVLIHRGVSAYSGHYIAHVKD 360
Query: 463 TLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP--FKFTKYS-NAYMLV 519
S +WYKF+DE + K + K+ Q G EE+L + + P K T S NAYMLV
Sbjct: 361 PQSGEWYKFNDEDIEKMEGKKL---QLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLV 417
Query: 520 Y 520
Y
Sbjct: 418 Y 418
>sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34
PE=1 SV=2
Length = 3546
Score = 149 bits (377), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 173/366 (47%), Gaps = 36/366 (9%)
Query: 186 DYWSY-DSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPL 244
DYW + D + E +VGL N GATCY+ S +Q L+ IP R+AV+ +E DM + L
Sbjct: 1880 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-DMKHKTTLL 1938
Query: 245 ALQSLFYKLQYSDSSVAT-KELTKSFGWDT--YDSFMQHDVQELNRVLSEKLEDKMKGTV 301
LQ +F L S+ + K++ D ++ Q D+ E L K+E+
Sbjct: 1939 ELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKIEEM--SPE 1996
Query: 302 VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG 361
++ T++ LF G N + ++ ++ S E FY ++ V +++Y S D+ + LEG
Sbjct: 1997 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEG 2056
Query: 362 DNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 420
DN Y G + A+K F P +L R+ ++ + K+N + FPL+LD+
Sbjct: 2057 DNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMT 2116
Query: 421 -------------RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTL--- 464
+E K +S + S Y L V VH+G GGHYY+FIR +
Sbjct: 2117 PYTEDFLMGKSERKEGFKEVSDHSKDSESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPH 2176
Query: 465 ---SDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP-----FKFTKYSNAY 516
+++WY F+D V D + E +GGE T +++ F F K +AY
Sbjct: 2177 AYKNNKWYLFNDAEVKPFDSAQLASECFGGE----MTTKTYDSVTDKFMDFSFEKTHSAY 2232
Query: 517 MLVYIR 522
ML Y R
Sbjct: 2233 MLFYKR 2238
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34
PE=1 SV=3
Length = 3582
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 36/366 (9%)
Query: 186 DYWSY-DSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPL 244
DYW + D + E +VGL N GATCY+ S +Q L+ IP R+AV+ +E DM + L
Sbjct: 1917 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSE-DMKHKTTLL 1975
Query: 245 ALQSLFYKLQYSDSSVAT-KELTKSFGWDT--YDSFMQHDVQELNRVLSEKLEDKMKGTV 301
LQ +F L S+ + K++ D ++ Q D+ E L K+E+
Sbjct: 1976 ELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTDLITKVEEM--SPE 2033
Query: 302 VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG 361
++ T++ LF G N + ++ ++ S E FY ++ V +++Y S D+ + LEG
Sbjct: 2034 LKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADMKNIYESLDEVTIKDTLEG 2093
Query: 362 DNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD 420
DN Y G + A+K F P +L R+ ++ + K+N + FPL+LD+
Sbjct: 2094 DNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFNMVTMMKEKVNTHFSFPLRLDMT 2153
Query: 421 RENGKYLSPDADR--SVRNL-----------YTLHSVLVHSGGVHGGHYYAFIRPTL--- 464
+L +DR +++ Y L V VH+G GGHYY+FIR +
Sbjct: 2154 PYTEDFLMGKSDRKEGFKDVGDRSKDTESYEYDLIGVTVHTGTADGGHYYSFIRDIVNPH 2213
Query: 465 ---SDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP-----FKFTKYSNAY 516
+++WY F+D V D + E +GGE T +++ F F K +AY
Sbjct: 2214 AYKNNKWYLFNDAEVKPFDSAQLASECFGGE----MTTKTYDSVTDKFMDFSFEKTHSAY 2269
Query: 517 MLVYIR 522
ML Y R
Sbjct: 2270 MLFYKR 2275
>sp|Q76LT8|UBP48_RAT Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus
GN=Usp48 PE=1 SV=1
Length = 1036
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 171/357 (47%), Gaps = 34/357 (9%)
Query: 185 VDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSG---- 240
+D + + +K+ +VGL N GA+CY+N+ LQ F R+A+Y P+T +D G
Sbjct: 75 IDDPNCERRKKNSFVGLTNLGASCYVNTFLQVWFLNLELRQALYLCPSTCSDYTKGDGIR 134
Query: 241 --------SIPLALQSLFYKLQYSDSS-VATKELTKSFGWDTYDSFMQHDVQELNRVLSE 291
+I LQ LF LQ S+ + K+ G DT Q D QE +++
Sbjct: 135 GGKDYEPQTICEHLQYLFALLQNSNRRYIDPSGFVKALGLDT---GQQQDAQESSKLFMS 191
Query: 292 KLED---KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA 348
LED K K V +QQ F G + C +S FY+L+L+++G + +
Sbjct: 192 LLEDTLSKQKNPDVRNVVQQQFCGEYAYVTVCSQCGRESKLVSKFYELELNIQGHKQLTD 251
Query: 349 SFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
++++ ERLEGDN+Y E Q+A + + + P L LQL RF +D K+
Sbjct: 252 CISEFLKEERLEGDNRYFCENCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKL 311
Query: 408 NDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSD 466
N F LD++ Y+ V Y L +VL+H G + GHY A ++ S
Sbjct: 312 NAYIGFSESLDME----PYVEHKGGSFV---YELSAVLIHRGVSAYSGHYIAHVKDPQSG 364
Query: 467 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP--FKFTKYS-NAYMLVY 520
WYKF+DE + K + K+ Q G EE+L + + P K T S NAYMLVY
Sbjct: 365 DWYKFNDEDIEKMEGKKL---QLGIEEDLTEPSKSQTRKPKCGKGTHCSRNAYMLVY 418
>sp|Q5ZM45|UBP48_CHICK Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus GN=USP48
PE=2 SV=1
Length = 1033
Score = 143 bits (360), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 172/359 (47%), Gaps = 40/359 (11%)
Query: 185 VDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTEN--------- 235
+D + + +K+ +VGL N GATCY+N+ LQ F R+A+Y + E+
Sbjct: 75 IDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLCSSNEHAAGESIPKD 134
Query: 236 -DMPSGSIPLALQSLFYKLQYSDSS-VATKELTKSFGWDTYDSFMQHDVQELNRVLSEKL 293
D +I LQ LF LQ S + K+ G DT Q D QE +++ L
Sbjct: 135 KDYEPQTICEHLQYLFALLQNSKRRYIDPSGFVKALGLDT---GQQQDAQEFSKLFMSLL 191
Query: 294 ED---KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASF 350
ED K K V +Q+ F G + C +S FY+L+L+++G + +
Sbjct: 192 EDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQGHKQLTDCI 251
Query: 351 DKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIND 409
++++ E+LEGDN+Y E Q+A + + + P L LQL RF +D K+N
Sbjct: 252 TEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQTGHKKKLNT 311
Query: 410 RYEFPLQLD----LDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTL 464
F LD ++++NG Y +Y L +VL+H G + GHY A ++
Sbjct: 312 YIGFSELLDMEPFMEQKNGVY-----------VYELSAVLIHRGVSAYSGHYIAHVKDPQ 360
Query: 465 SDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP--FKFTKYS-NAYMLVY 520
+ +WYKF+DE + K + K+ Q G EE+L + + P K T S NAYMLVY
Sbjct: 361 TGEWYKFNDEDIEKMEGKKL---QLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVY 416
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 180/375 (48%), Gaps = 47/375 (12%)
Query: 191 DSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLF 250
DS+ +G+VGL+N GATCYMN++ Q L+ P +++ + ++ S+ +QSLF
Sbjct: 1678 DSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNP-DDSVFYQVQSLF 1736
Query: 251 -----YKLQYSDSSVATKELTKSFGWDTYDSFM--QHDVQELNRVLSEKLEDKMKGTVVE 303
KLQY + K F + ++ Q D E L +++++ +K E
Sbjct: 1737 GHLMESKLQY----YVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRE 1792
Query: 304 GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN 363
+ F+G + + C + ++ R+E+F L L V C+ + S D++V E LEG N
Sbjct: 1793 QIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSN 1852
Query: 364 KYHAEQYGLQDAK-KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD-- 420
Y+ E+ + K P VL + L RF +D+ +K +++ FP L+++
Sbjct: 1853 AYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPY 1912
Query: 421 --------------RENGKYL------SPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFI 460
ENG+ + SP ++ Y L V+VHSG H GHYY+FI
Sbjct: 1913 TVAGMARQDSSSEVGENGRNMDQGGGGSPRKKVALTENYELVGVIVHSGQAHAGHYYSFI 1972
Query: 461 ---RPTLSDQWYKFDDERVTKEDLK-RALE-EQYGGE---EELPQTNPGFNNTPFKFTKY 512
R +WYKF+D + + DL LE E +GGE + QTNP + +Y
Sbjct: 1973 KDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQTNPYTDVR----RRY 2028
Query: 513 SNAYMLVYIRESDKD 527
NAYML Y R SD++
Sbjct: 2029 WNAYMLFYQRVSDQN 2043
>sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens
GN=USP9X PE=1 SV=3
Length = 2570
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 182/407 (44%), Gaps = 75/407 (18%)
Query: 197 GYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTT----ENDMPS-------GSIPLA 245
G+VGLKN GATCYMNS++Q L+ IP R + + T ++DM ++
Sbjct: 1555 GFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPR 1614
Query: 246 LQSLFYKLQYSDSSVATK-------------ELTKSFG---------------WDTYDSF 277
Y Q+ D +K L FG W + +
Sbjct: 1615 DDVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLW 1674
Query: 278 M-------QHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRK 330
QHD E L + L++ +K + ++ G + C ++ +
Sbjct: 1675 GEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECE 1734
Query: 331 ESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQ 389
ESF L +D++ +++ S ++YV+ + LEG N YH E+ + D K +L PPVL
Sbjct: 1735 ESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLA 1794
Query: 390 LQLKRFEYDFMRDTMVKINDRYEFPLQLDLD--------RENGKYLSP-----------D 430
+QLKRF+YD+ R+ +K ND +EFP +LD++ + G ++P +
Sbjct: 1795 IQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQSEQSE 1854
Query: 431 ADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLS-----DQWYKFDDERVTK---EDLK 482
++ + Y L VLVHSG GGHYY++I ++WYKFDD VT+ +D +
Sbjct: 1855 SETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGERNRWYKFDDGDVTECKMDDDE 1914
Query: 483 RALEEQYGGEEELPQTNPGFNNTPFKFTK-YSNAYMLVYIRESDKDK 528
+ +GGE + ++ K + NAY+L Y R D+
Sbjct: 1915 EMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDQ 1961
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 180/375 (48%), Gaps = 47/375 (12%)
Query: 191 DSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLF 250
DS+ +G+VGL+N GATCYMN++ Q L+ P +++ + ++ S+ +QSLF
Sbjct: 1681 DSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNP-DDSVFYQVQSLF 1739
Query: 251 -----YKLQYSDSSVATKELTKSFGWDTYDSFM--QHDVQELNRVLSEKLEDKMKGTVVE 303
KLQY + K F + ++ Q D E L +++++ +K +
Sbjct: 1740 GHLMESKLQY----YVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRD 1795
Query: 304 GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN 363
+ F+G + + C + ++ R+E+F L L V C+ + S D++V E LEG N
Sbjct: 1796 QIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSN 1855
Query: 364 KYHAEQYGLQDAK-KGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD-- 420
Y+ E+ + K P VL + L RF +D+ +K +++ FP L+++
Sbjct: 1856 AYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPY 1915
Query: 421 --------------RENGKYL------SPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFI 460
ENG+ + SP ++ Y L V+VHSG H GHYY+FI
Sbjct: 1916 TVSGMARQDSSSEVGENGRSVDQGGGGSPRKKVALTENYELVGVIVHSGQAHAGHYYSFI 1975
Query: 461 ---RPTLSDQWYKFDDERVTKEDLK-RALE-EQYGGE---EELPQTNPGFNNTPFKFTKY 512
R +WYKF+D + + DL LE E +GGE + QTNP + +Y
Sbjct: 1976 KDRRGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQTNPYTDVR----RRY 2031
Query: 513 SNAYMLVYIRESDKD 527
NAYML Y R SD++
Sbjct: 2032 WNAYMLFYQRVSDQN 2046
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 190/447 (42%), Gaps = 71/447 (15%)
Query: 123 AVINQIHSKYSVRKDTQHQF-------------NARESDWGFTSFMPLGELYDPNRGYLV 169
AV +IHS ++ K Q N+++S F +P +
Sbjct: 23 AVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDSPNCFCGLIPAAN-------GVR 75
Query: 170 NDTLIVEAEVIVRRVVDYWSYDSKKETGY-VGLKNQGATCYMNSLLQTLFHIPYFRKAVY 228
L I+R + S D + T GL N GATCY NS+LQ L+ FR ++
Sbjct: 76 KSGLWQRTNEIIRALGPNPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIF 135
Query: 229 HM-PTTENDMPSGSIPLALQSLFYKLQYS-----DSSVATKELTKSFGWDTYDSFMQHDV 282
+ P P + L LF +L S DS+ K L D+ +Q D
Sbjct: 136 SLEPDILKMHP---VLDQLARLFAQLHSSKMAFIDSAPFIKTLE-------LDNGVQQDS 185
Query: 283 QELNRVLSEKLEDKMKGTVVEGT---IQQLFEG---HHMNYIECINVDYKSTRKESFYDL 336
E + LE + + V G +Q LF G H C S++ E FY+L
Sbjct: 186 HEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYEL 245
Query: 337 QLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRF 395
+L++KG ++ S D Y+ E L+G+N+Y E + DA + + PPV+ QLKR+
Sbjct: 246 ELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
Query: 396 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGG 454
+ T KI+ + FP QLD+ GK LS + S Y L ++L+H G + G
Sbjct: 306 VFLPKTTTKKKISSAFSFPGQLDM----GKRLS---NPSSSYTYGLSAILIHKGSAANSG 358
Query: 455 HYYAFIRPTLSDQWYKFDDERVTKEDL-----------KRALEEQYGGEEELPQTN---- 499
HY A ++ + QW++FDDE V+K L + ++ G TN
Sbjct: 359 HYVAHVKDESNGQWWEFDDEHVSKLGLHPFGEKPGKSSNKTDQKPQGSSTADSVTNDDNN 418
Query: 500 ----PGFNNTPFKFTKYSNAYMLVYIR 522
F +T + ++AYML+Y R
Sbjct: 419 SCHEAAFTSTMEEMFSSTDAYMLMYKR 445
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 133 bits (334), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 190/447 (42%), Gaps = 71/447 (15%)
Query: 123 AVINQIHSKYSVRKDTQHQF-------------NARESDWGFTSFMPLGELYDPNRGYLV 169
AV +IHS ++ K Q N+++S F +P +
Sbjct: 23 AVFKKIHSTGAITKGDIKQLYMVWKPVCHGCHGNSKDSPNCFCGLIPAAN-------GVR 75
Query: 170 NDTLIVEAEVIVRRVVDYWSYDSKKETGY-VGLKNQGATCYMNSLLQTLFHIPYFRKAVY 228
L I+R + S D + T GL N GATCY NS+LQ L+ FR ++
Sbjct: 76 KSGLWQRTNEIIRALGPNPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIF 135
Query: 229 HM-PTTENDMPSGSIPLALQSLFYKLQYS-----DSSVATKELTKSFGWDTYDSFMQHDV 282
+ P P + L LF +L S DS+ K L D+ +Q D
Sbjct: 136 SLEPDILKMHP---VLDQLARLFAQLHSSKMAFIDSAPFIKTLE-------LDNGVQQDS 185
Query: 283 QELNRVLSEKLEDKMKGTVVEGT---IQQLFEG---HHMNYIECINVDYKSTRKESFYDL 336
E + LE + + V G +Q LF G H C S++ E FY+L
Sbjct: 186 HEFLTLFLSLLEGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYEL 245
Query: 337 QLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRF 395
+L++KG ++ S D Y+ E L+G+N+Y E + DA + + PPV+ QLKR+
Sbjct: 246 ELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRY 305
Query: 396 EYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGG 454
+ T KI+ + FP QLD+ GK LS + S Y L ++L+H G + G
Sbjct: 306 VFLPKTTTKKKISSAFSFPGQLDM----GKRLS---NPSSSYTYGLSAILIHKGSAANSG 358
Query: 455 HYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPG------------- 501
HY A ++ + QW++FDDE V+K L E+ ++ Q G
Sbjct: 359 HYVAHVKDESNGQWWEFDDEHVSKLGLHPFGEKPGKSSDKTDQKPQGSSTADSVTNDDNN 418
Query: 502 ------FNNTPFKFTKYSNAYMLVYIR 522
F +T + ++AYML+Y R
Sbjct: 419 SCHEAAFTSTMEEMFSSTDAYMLMYKR 445
>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila
melanogaster GN=faf PE=1 SV=2
Length = 2778
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 184/442 (41%), Gaps = 74/442 (16%)
Query: 154 FMPLGELYDPNRGYLVNDTLI--VEAEVIVRRVVDYWSYDSKKET-GYVGLKNQGATCYM 210
+ L +L PN L N TLI V + R DY + T G+ GLKN GATCYM
Sbjct: 1621 LIALCQLCVPNMKLLTN-TLIDFVCTDTDPLREWDYLPPVGARPTKGFCGLKNAGATCYM 1679
Query: 211 NSLLQTLFHIPYFRKAVY--HMPTT--------ENDMPSGSIPLAL----QSLFYKLQYS 256
NS+LQ L+ +P R + H T ++D+ G + AL S L S
Sbjct: 1680 NSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGDSDLTGGGLGSALFSGPASALVSLPSS 1739
Query: 257 DSS--------------VATKELTKSFG---------------WDTYDSFM-------QH 280
S+ V K + F W + Q
Sbjct: 1740 SSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSALQYYVPRGLWTHFKLLGEPVNLREQQ 1799
Query: 281 DVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 340
D E L E L++ +K + G + C ++ +++E F +D+
Sbjct: 1800 DAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQKICQECPHRYSKEEPFSVFSVDI 1859
Query: 341 KGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQDAK-KGVLFIDFPPVLQLQLKRFEYDF 399
+ + S ++YV+ E LEG + YH ++ + K V PPVL +QLKRFEYD+
Sbjct: 1860 RNHSSLTESLEQYVKGELLEGADAYHCDKCDKKVVTVKRVCVKKLPPVLAIQLKRFEYDY 1919
Query: 400 MRDTMVKINDRYEFPLQLDLDRENGKYLSP-------DADRSVRNL----YTLHSVLVHS 448
R +K ND +EFP LD++ L+ D N+ Y L ++VHS
Sbjct: 1920 ERVCAIKFNDYFEFPRILDMEPYTVSGLAKLEGEVVEVGDNCQTNVETTKYELTGIVVHS 1979
Query: 449 GGVHGGHYYAFI---RPTLSD-QWYKFDDERVTKEDLKRALE---EQYGGEEELPQTNPG 501
G GGHY+++I P QWYKFDD VT+ + E E +GGE +
Sbjct: 1980 GQASGGHYFSYILSKNPANGKCQWYKFDDGEVTECKMHEDEEMKAECFGGEYMGETYDNN 2039
Query: 502 FNNTPFKFTK-YSNAYMLVYIR 522
++ K + NAYML Y R
Sbjct: 2040 LKRMQYRRQKRWWNAYMLFYTR 2061
>sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens
GN=USP9Y PE=1 SV=2
Length = 2555
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 176/399 (44%), Gaps = 75/399 (18%)
Query: 197 GYVGLKNQGATCYMNSLLQTLFHIPYF--------------------------------R 224
G+VGLKN GATCYMNS++Q L+ IP R
Sbjct: 1557 GFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDLHDDMFGDEKQDSESNVDPR 1616
Query: 225 KAVYHMPTTENDMPSGS-----------IPLALQSLFYKLQYSDSSV-ATKELTKSFG-W 271
V+ P D P+ S + LQ +F L S + K F W
Sbjct: 1617 DDVFGYPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASQLQYYVPRGFWKQFRLW 1676
Query: 272 -DTYDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRK 330
+ + QHD E L + L++ +K + ++ G + C ++ +
Sbjct: 1677 GEPVNLREQHDALEFFNSLVDSLDEALKALGHPAILSKVLGGSFADQKICQGCPHRYECE 1736
Query: 331 ESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQ 389
ESF L +D++ +++ S ++Y++ + LEG N YH E+ + D K +L P VL
Sbjct: 1737 ESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKVDTVKRLLIKKLPRVLA 1796
Query: 390 LQLKRFEYDFMRDTMVKINDRYEFPLQLD-----------LDRENGKYLS--------PD 430
+QLKRF+YD+ R+ +K ND +EFP +LD L+R+N + D
Sbjct: 1797 IQLKRFDYDWERECAIKFNDYFEFPRELDMGPYTVAGVANLERDNVNSENELIEQKEQSD 1856
Query: 431 ADRSVRNLYTLHSVLVHSGGVHGGHYYAFI-----RPTLSDQWYKFDDERVTK---EDLK 482
+ + Y L VLVHSG GGHYY++I + +D WYKFDD VT+ +D +
Sbjct: 1857 NETAGGTKYRLVGVLVHSGQASGGHYYSYIIQRNGKDDQTDHWYKFDDGDVTECKMDDDE 1916
Query: 483 RALEEQYGGEEELPQTNPGFNNTPFKFTK-YSNAYMLVY 520
+ +GGE + ++ K + NAY+L Y
Sbjct: 1917 EMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFY 1955
>sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana
GN=UBP26 PE=1 SV=3
Length = 1067
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 159/359 (44%), Gaps = 42/359 (11%)
Query: 195 ETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQ 254
E+ GL N GATCY NS+LQ L+ FR+ V+ + + + + + LF +L
Sbjct: 102 ESTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEV--HVLKQNPVLDQIARLFAQLH 159
Query: 255 YSDSS-VATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKM--KGTVVEGTIQQLFE 311
S S V + K+ D+ +Q D E +L LE + G + +Q LF
Sbjct: 160 ASQKSFVDSDAFVKTL---ELDNGVQQDTHEFLTLLLSLLERCLLHSGVKAKTIVQDLFS 216
Query: 312 G---HHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAE 368
G H +C S++ E FY L+L+VKG + + AS + Y+ +E+L GDN+Y
Sbjct: 217 GSVSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCG 276
Query: 369 QYGLQ-DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYL 427
+ DA + + PPV+ QLKR + KI + FP LD+ G L
Sbjct: 277 SCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKKITSSFSFPQVLDM----GSRL 332
Query: 428 SPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALE 486
+ + + Y L +VL+H G V+ GHY A I+ + W++FDDE V+ E KR
Sbjct: 333 AESSQNKL--TYDLSAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVS-ELGKRPCN 389
Query: 487 EQYGGEEELPQTNPGFNNTPFKFT-------------------KYSNAYMLVYIRESDK 526
E PQ+ + T S+AYML+Y DK
Sbjct: 390 E---ASSSTPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSDAYMLMYSLRCDK 445
>sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus
GN=Usp9x PE=1 SV=2
Length = 2559
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 29/273 (10%)
Query: 279 QHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQL 338
QHD E L + L++ +K + ++ G + C ++ +ESF L +
Sbjct: 1683 QHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNV 1742
Query: 339 DVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ-DAKKGVLFIDFPPVLQLQLKRFEY 397
D++ +++ S ++YV+ + LEG N YH E+ + D K +L PPVL +QLKRF+Y
Sbjct: 1743 DIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDY 1802
Query: 398 DFMRDTMVKINDRYEFPLQLDLD--------RENGKYLSP-----------DADRSVRNL 438
D+ R+ +K ND +EFP +LD++ + G ++P +++++
Sbjct: 1803 DWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSESEKAGSTK 1862
Query: 439 YTLHSVLVHSGGVHGGHYYAFI-----RPTLSDQWYKFDDERVTK---EDLKRALEEQYG 490
Y L VLVHSG GGHYY++I ++WYKFDD VT+ +D + + +G
Sbjct: 1863 YRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCFG 1922
Query: 491 GEEELPQTNPGFNNTPFKFTK-YSNAYMLVYIR 522
GE + ++ K + NAY+L Y R
Sbjct: 1923 GEYMGEVFDHMMKRMSYRRQKRWWNAYILFYER 1955
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 197 GYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDM 237
G+VGLKN GATCYMNS++Q L+ IP R + + T +D+
Sbjct: 1555 GFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDV 1595
>sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP8 PE=1 SV=1
Length = 471
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 161/366 (43%), Gaps = 59/366 (16%)
Query: 168 LVNDTLIVEA--EVIVRRVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRK 225
L+ND ++ + +V + +V ++ G GL N G+TC+M+S+LQ L H PYF +
Sbjct: 108 LINDAILAKYWDDVCTKTMVP----SMERRDGLSGLINMGSTCFMSSILQCLIHNPYFIR 163
Query: 226 ---AVYHMPTTENDMPSGSIPLALQSLFYKL-------QYSDSSVATKELTK-----SFG 270
+ H + P AL + ++L Q S SS +T T +
Sbjct: 164 HSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFIYLLTCA 223
Query: 271 W---DTYDSFMQHDVQE-----LNRVLSEKLED--------KMKGTVVEGTIQQLFEGHH 314
W + Q D E +N++ + D + E + +FEG
Sbjct: 224 WKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSL 283
Query: 315 MNYIECINVDYKS-TRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGLQ 373
+ I C S T + F DL LD+K + +Y D + + E+L+ N + E Q
Sbjct: 284 ESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFNYHCGECNSTQ 343
Query: 374 DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR-----------E 422
DA K + P VL LQLKRFE+ + + K++D EFP L++ E
Sbjct: 344 DAIKQLGIHKLPSVLVLQLKRFEH-LLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSE 402
Query: 423 NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLK 482
NGK PD +Y L ++ H G V+ GHY AF + + QW+KF+D V+ +
Sbjct: 403 NGKV--PDI------IYELIGIVSHKGTVNEGHYIAFCKIS-GGQWFKFNDSMVSSISQE 453
Query: 483 RALEEQ 488
L+EQ
Sbjct: 454 EVLKEQ 459
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 153/333 (45%), Gaps = 42/333 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ + + ++ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 258 SSVAT----KELTKSFGWD-TYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K +T+ + +D++MQ D E LN +L+ E+ +DK G +
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNGKLAN 155
Query: 304 GT---------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYA 348
GT + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITH 215
Query: 349 SFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKI 407
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K+
Sbjct: 216 CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKL 275
Query: 408 NDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSD 466
+ R FPL+L L +G +P+ LY L +V+VH G G + GHY A ++ D
Sbjct: 276 SYRVVFPLELRLFNTSGDATNPE------RLYDLVAVVVHCGSGPNRGHYIAIVKS--HD 327
Query: 467 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTN 499
W FDD+ V K D +A+EE YG E+ + +
Sbjct: 328 FWLLFDDDIVEKID-AQAIEEFYGLTSEISKNS 359
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 153/334 (45%), Gaps = 43/334 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ + + ++ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLADLFHSIANQK 95
Query: 258 SSVAT----KELTKSFGWD-TYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K +T+ + +D++MQ D E LN +L+ E+ +DK G +
Sbjct: 96 RKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTNGRLAN 155
Query: 304 GT----------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVY 347
G+ + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSIT 215
Query: 348 ASFDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVK 406
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K
Sbjct: 216 HCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTK 275
Query: 407 INDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLS 465
++ R FPL+L L +G +P+ LY L +V+VH G G + GHY A ++
Sbjct: 276 LSYRVVFPLELRLFNTSGDATNPE------RLYDLVAVVVHCGSGPNRGHYIAIVKS--H 327
Query: 466 DQWYKFDDERVTKEDLKRALEEQYGGEEELPQTN 499
D W FDD+ V K D +A+EE YG E+ + +
Sbjct: 328 DFWLLFDDDIVEKID-AQAIEEFYGLTSEISKNS 360
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 145/322 (45%), Gaps = 40/322 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + S+ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIATQK 95
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K + +D++MQ D E LN +L+ E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 304 GTI-------------QQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASF 350
G I ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCL 215
Query: 351 DKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIND 409
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K++
Sbjct: 216 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSY 275
Query: 410 RYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQW 468
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D W
Sbjct: 276 RVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDFW 327
Query: 469 YKFDDERVTKEDLKRALEEQYG 490
FDD+ V K D +A+EE YG
Sbjct: 328 LLFDDDIVEKID-AQAIEEFYG 348
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 148/323 (45%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIATQK 95
Query: 258 SSVAT----KELTKSFGWD-TYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K +T+ + +D++MQ D E LN +L+ E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRN 155
Query: 304 GTI--------------QQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHC 215
Query: 350 FDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K++
Sbjct: 216 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLS 275
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D
Sbjct: 276 YRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDF 327
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 328 WLLFDDDIVEKID-AQAIEEFYG 349
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + S+ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIATQK 95
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K + +D++MQ D E LN +L+ E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPN 155
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHC 215
Query: 350 FDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K++
Sbjct: 216 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLS 275
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D
Sbjct: 276 YRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDF 327
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 328 WLLFDDDIVEKID-AQAIEEFYG 349
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLSDLFHSIATQK 95
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K + +D++MQ D E LN +L+ E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPN 155
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHC 215
Query: 350 FDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K++
Sbjct: 216 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLS 275
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D
Sbjct: 276 YRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDF 327
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 328 WLLFDDDIVEKID-AQAIEEFYG 349
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLSDLFHSIATQK 95
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K + +D++MQ D E LN +L+ E+ ++K G +
Sbjct: 96 KKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPN 155
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+ + S++ E F DL +DV+ +
Sbjct: 156 GNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHC 215
Query: 350 FDKYVEVERLEGDNKYHAEQY-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E+ Q+A K + P +L L LKRF+Y K++
Sbjct: 216 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLS 275
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L +G +PD +Y L +V+VH G G + GHY A ++ D
Sbjct: 276 YRVVFPLELRLFNTSGDATNPD------RMYDLVAVVVHCGSGPNRGHYIAIVKS--HDF 327
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 328 WLLFDDDIVEKID-AQAIEEFYG 349
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENV--LAYKAQQKKKENLLTCLADLFHSIATQK 91
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K D +D++MQ D E LN +L+ EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 350 FDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 324 WLLFDDDIVEKID-AQAIEEFYG 345
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENV--LAYKAQQKKKENLLTCLADLFHSIATQK 91
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K D +D++MQ D E LN +L+ EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 350 FDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 324 WLLFDDDIVEKID-AQAIEEFYG 345
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 41/323 (12%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENV--LAYKAQQKKKENLLTCLADLFHSIATQK 91
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS--------EKLEDKMKGTVVE 303
V K D +D++MQ D E LN +L+ EK ++K G +
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKN 151
Query: 304 GT--------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYAS 349
G + ++F+G N C+N + S++ E F DL +DV+ +
Sbjct: 152 GNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHC 211
Query: 350 FDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKIN 408
+ E L + KY+ E Q+A+K + P +L L LKRF+Y K++
Sbjct: 212 LRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLS 271
Query: 409 DRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPTLSDQ 467
R FPL+L L + ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 YRVVFPLELRLFNTSSDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS--HGF 323
Query: 468 WYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 324 WLLFDDDIVEKID-AQAIEEFYG 345
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 144/327 (44%), Gaps = 45/327 (13%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y GL N G TCY NS+LQ L+ FR+ V + ++ L LF+ +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQK--KKENLLTCLADLFHSIATQK 91
Query: 258 SSVATKELTKSFGW-----DTYDSFMQHDVQE-LNRVLS------------EKLEDKMK- 298
V K D +D++MQ D E LN +L+ EK ++K
Sbjct: 92 KKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLKN 151
Query: 299 -GTVVEGT------------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRD 345
GT + + ++F+G N C+N + S++ E F DL +DV+
Sbjct: 152 NGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 211
Query: 346 VYASFDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTM 404
+ + E L + KY+ E Q+A+K + P +L L LKRF+Y
Sbjct: 212 ITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 271
Query: 405 VKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYAFIRPT 463
K++ R FPL+L L +G ++ D +Y L +V+VH G G + GHY ++
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDAVNLD------RMYDLVAVVVHCGSGPNRGHYITIVKS- 324
Query: 464 LSDQWYKFDDERVTKEDLKRALEEQYG 490
W FDD+ V K D +A+EE YG
Sbjct: 325 -HGFWLLFDDDIVEKID-AQAIEEFYG 349
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 108/203 (53%), Gaps = 29/203 (14%)
Query: 9 IDQQEDEEMLVPHSDLADNH-----QPMEVVAQPETANAVENNQPLDDPPS--------- 54
+ + +E+ S L +N Q E +A+ ++ VEN P PP
Sbjct: 1 MSESTNEDSGAGRSSLEENSNGQRSQSEEAIAEWRSSEQVENGTPSTSPPYWDIDDDDDF 60
Query: 55 --------SRFTWRIENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNV-DHLSMYLDVA 105
+ TW IE FS +N ++ ++F VGG+KW +LI+P+G +V +HLS++L VA
Sbjct: 61 GSKPSQLFGKNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDVCNHLSLFLCVA 120
Query: 106 DSSSLPYGWSRYAQFSLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNR 165
L GWS +AQF++AV N+ K S DT H+F +E DWG+ F+ L +L +
Sbjct: 121 HHEKLLPGWSHFAQFTIAVSNK-DPKKSKHSDTLHRFWKKEHDWGWKKFIELPKLKE--- 176
Query: 166 GYLVND-TLIVEAEV-IVRRVVD 186
G++ + L ++A+V ++R VD
Sbjct: 177 GFIDDSGCLTIKAQVQVIRERVD 199
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 162/389 (41%), Gaps = 77/389 (19%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAV--YHMPTTENDMPSGSIPLALQSLFYKLQY 255
Y GL N G TCY NS++Q LF FR+ V Y ++ ++ L LF+ +
Sbjct: 26 YYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSIAS 85
Query: 256 SDSSVAT---KELTKSFGWDT--YDSFMQHDVQEL---------NRVLSEKLEDKMK--- 298
V T K + +D++MQ D E ++ EK+ ++ K
Sbjct: 86 QKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASR 145
Query: 299 ---------------------------------GTVVEGT-----------IQQLFEGHH 314
G VEG I ++F+G
Sbjct: 146 HGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGIL 205
Query: 315 MNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQYGL-Q 373
N C++ + S++ E F DL +DV+ + + E E L GD KY E Q
Sbjct: 206 TNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQ 265
Query: 374 DAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADR 433
+A+K + P +L L LKRF++ + K++ R FPL+L L +S DA+
Sbjct: 266 EAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFN-----VSDDAEY 320
Query: 434 SVRNLYTLHSVLVHSGGV-HGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGE 492
R +Y L + +VH G + GHY ++ + W FDD+ V K ++ ++EE G
Sbjct: 321 GDR-MYDLVATVVHCGATPNRGHYITLVKS--NSFWLVFDDDIVEKLEVS-SMEEFSGMS 376
Query: 493 EELP-QTNPGFNNTPFKFTKYSNAYMLVY 520
+ Q PG + P K ++ +AY+L Y
Sbjct: 377 TDANIQMPPGNQSAPQKNSE--SAYILFY 403
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 49/318 (15%)
Query: 198 YVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSD 257
Y G +N G TCY NS+LQ L+ FR+ + ++ L LF ++
Sbjct: 22 YFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQK 81
Query: 258 SSVAT-------------KELTKSFGWDTYDSFMQHDVQELNRVLS-------------- 290
EL +S+ F+ + + EL +L
Sbjct: 82 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSS 141
Query: 291 --EKLEDKMKGTVVEGT--------IQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDV 340
EK+ + +K + G + ++F+G N C+ + + R E+F DL LD+
Sbjct: 142 SPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201
Query: 341 KGCRDVYASFDKYVEVERLEGDNKYHAEQ-YGLQDAKKGVLFIDFPPVLQLQLKRFEYDF 399
+ + + + E L ++K+ ++ LQ+A+K + P +L + LKRF+Y
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 400 MRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGHYYA 458
K++ R FPL+L LS D V Y+L +V+VH G G + GHY +
Sbjct: 262 QLGRYKKLSYRVVFPLELK--------LSNTVDEYVDIEYSLFAVVVHVGSGPNHGHYVS 313
Query: 459 FIRPTLSDQWYKFDDERV 476
++ + W FDDE V
Sbjct: 314 LVKS--HNHWLFFDDESV 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 426,389,069
Number of Sequences: 539616
Number of extensions: 19766435
Number of successful extensions: 64113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 62853
Number of HSP's gapped (non-prelim): 872
length of query: 1077
length of database: 191,569,459
effective HSP length: 128
effective length of query: 949
effective length of database: 122,498,611
effective search space: 116251181839
effective search space used: 116251181839
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)