Query 037463
Match_columns 344
No_of_seqs 310 out of 1316
Neff 5.9
Searched_HMMs 46136
Date Fri Mar 29 12:33:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037463.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037463hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 1.1E-36 2.5E-41 296.7 11.6 216 64-294 38-295 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.1E-32 2.3E-37 257.5 15.0 216 64-293 15-240 (240)
3 PRK15171 lipopolysaccharide 1, 100.0 3.8E-31 8.3E-36 258.9 13.6 204 77-296 52-292 (334)
4 cd00505 Glyco_transf_8 Members 100.0 4.6E-31 1E-35 246.4 13.0 196 64-260 15-245 (246)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 3.1E-30 6.8E-35 240.2 10.8 196 65-260 15-247 (248)
6 cd06429 GT8_like_1 GT8_like_1 100.0 8.7E-30 1.9E-34 241.2 12.1 205 67-291 16-257 (257)
7 cd06914 GT8_GNT1 GNT1 is a fun 100.0 2E-29 4.4E-34 240.7 14.5 223 64-292 15-277 (278)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 3.9E-29 8.5E-34 239.4 14.4 206 78-298 28-276 (280)
9 PF01501 Glyco_transf_8: Glyco 99.9 4.6E-28 1E-32 221.1 9.5 199 64-262 13-249 (250)
10 COG1442 RfaJ Lipopolysaccharid 99.9 5.6E-26 1.2E-30 221.2 12.3 184 80-263 32-248 (325)
11 PLN02867 Probable galacturonos 99.9 1.7E-24 3.8E-29 219.9 10.5 158 128-302 328-532 (535)
12 PLN02659 Probable galacturonos 99.9 7.4E-24 1.6E-28 214.8 8.7 152 127-294 326-523 (534)
13 PLN02769 Probable galacturonos 99.9 3.1E-23 6.7E-28 213.8 12.0 150 126-292 433-618 (629)
14 PLN02870 Probable galacturonos 99.9 1.2E-23 2.6E-28 213.1 7.3 136 126-262 324-505 (533)
15 PLN02829 Probable galacturonos 99.9 4.8E-23 1E-27 211.5 11.7 151 126-292 438-627 (639)
16 PLN02523 galacturonosyltransfe 99.9 1E-22 2.2E-27 207.1 12.8 151 126-292 358-547 (559)
17 PLN02718 Probable galacturonos 99.9 1.2E-22 2.6E-27 208.6 12.5 194 79-291 341-590 (603)
18 PLN02742 Probable galacturonos 99.9 2E-22 4.4E-27 204.6 10.8 153 126-295 334-526 (534)
19 PLN02910 polygalacturonate 4-a 99.9 3.3E-22 7.3E-27 205.1 10.9 148 128-291 458-644 (657)
20 cd06432 GT8_HUGT1_C_like The C 99.9 3.5E-22 7.6E-27 188.3 8.7 170 79-255 29-239 (248)
21 cd06430 GT8_like_2 GT8_like_2 99.9 7.5E-22 1.6E-26 190.6 10.3 178 78-256 27-255 (304)
22 KOG1950 Glycosyl transferase, 99.7 1E-18 2.3E-23 173.2 6.9 219 123-341 143-368 (369)
23 COG5597 Alpha-N-acetylglucosam 99.5 4.3E-15 9.3E-20 141.9 4.3 121 132-262 156-339 (368)
24 PF03407 Nucleotid_trans: Nucl 97.6 0.0002 4.4E-09 65.1 7.4 124 128-255 48-201 (212)
25 PLN03182 xyloglucan 6-xylosylt 96.8 0.018 3.8E-07 58.3 12.4 119 142-264 196-367 (429)
26 KOG1879 UDP-glucose:glycoprote 95.1 0.014 3E-07 65.6 2.9 126 130-261 1261-1425(1470)
27 PF05637 Glyco_transf_34: gala 94.6 0.017 3.6E-07 54.6 1.7 122 132-258 60-234 (239)
28 KOG1928 Alpha-1,4-N-acetylgluc 93.6 0.087 1.9E-06 52.9 4.5 78 148-225 242-322 (409)
29 PF11051 Mannosyl_trans3: Mann 93.0 0.087 1.9E-06 50.5 3.4 49 134-191 81-130 (271)
30 PLN03181 glycosyltransferase; 80.5 5.8 0.00012 40.7 7.3 96 132-230 182-324 (453)
31 cd02515 Glyco_transf_6 Glycosy 77.8 3.7 8E-05 39.7 4.8 107 124-233 97-248 (271)
32 PRK15384 type III secretion sy 72.0 2.9 6.4E-05 40.0 2.5 47 144-190 216-265 (336)
33 PRK15382 non-LEE encoded effec 71.2 3.2 6.9E-05 39.8 2.5 47 144-190 211-260 (326)
34 PRK15383 type III secretion sy 70.7 3.3 7.1E-05 39.7 2.5 47 144-190 219-268 (335)
35 PF04488 Gly_transf_sug: Glyco 64.4 3.8 8.2E-05 33.2 1.4 32 131-165 66-98 (103)
36 PF03314 DUF273: Protein of un 48.0 44 0.00095 31.5 5.6 77 142-219 40-126 (222)
37 KOG4748 Subunit of Golgi manno 38.0 89 0.0019 31.7 6.4 111 142-256 174-333 (364)
38 TIGR03513 GldL_gliding gliding 26.6 41 0.00088 31.3 1.8 22 9-31 48-69 (202)
39 COG2943 MdoH Membrane glycosyl 25.4 1E+02 0.0022 33.2 4.5 117 35-159 132-256 (736)
40 PF03414 Glyco_transf_6: Glyco 22.7 1.1E+02 0.0024 30.6 4.1 105 127-234 165-314 (337)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=1.1e-36 Score=296.71 Aligned_cols=216 Identities=28% Similarity=0.425 Sum_probs=162.7
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCEEEEEechhhHHHhhhcc---CCCcchhhhHhhhcc
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYRVYWVHAKLLLLLLKQK---DSYNEWNYSKLRVWQ 140 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~~y~~~~~dl~~l~~~~---~~ys~~ty~KL~i~~ 140 (344)
|.+++++|++..++.+++ |++++...|..-...+ +..|... ..+ ..+.....+. ..+...+|+||++|+
T Consensus 38 Ga~vL~~SLr~~~s~~~l-VvlVt~dVp~e~r~~L----~~~g~~V-~~V--~~i~~~~~~~~~~~~~~~i~~tKl~iw~ 109 (333)
T PLN00176 38 GVVGLAKGLRKVKSAYPL-VVAVLPDVPEEHRRIL----VSQGCIV-REI--EPVYPPENQTQFAMAYYVINYSKLRIWE 109 (333)
T ss_pred HHHHHHHHHHHhCCCCCE-EEEECCCCCHHHHHHH----HHcCCEE-EEe--cccCCcccccccccchhhhhhhhhhhcc
Confidence 889999999998888886 8888888876543333 3334322 111 0010011111 122345899999999
Q ss_pred cCCcCEEEEEeCCccccCCchhhhcCCc--ccccCC----------------------------------CCCcccceEE
Q 037463 141 LIEYDKIIFIDSDLLVLKNIDEFFFYPE--FSAAGT----------------------------------NKVLFNSGVM 184 (344)
Q Consensus 141 L~~ydKVLYLDaD~LVl~dIdeLF~l~~--iaAvpd----------------------------------~~~yFNSGVm 184 (344)
+++|+||||||||+||++|||+||+++. ++|+.+ ...|||||||
T Consensus 110 l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~~~~yFNSGVl 189 (333)
T PLN00176 110 FVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPPPLYFNAGMF 189 (333)
T ss_pred ccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccCCCCCeEEeEEE
Confidence 9999999999999999999999999963 555432 1249999999
Q ss_pred EEeCChhhHHHHHHHHhhCCCCCCCChHHHHHHhh-cccccCcccccccccccCCchhhhcCCCcEEEEecC--CCCCCC
Q 037463 185 VIEPSLCKFEDLTLKSFKVSSYNGGDQGFLNEVFT-WWHRLPKRINHLKVFSKQDDKEHQVGDGLYAIHYLG--LKPWMC 261 (344)
Q Consensus 185 Linps~~~~~~l~~~~~~~~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~IIHf~g--~KPW~~ 261 (344)
||||+.+++++|++.+.....+.++|||+||.+|. +|..||.+||++......+++..+ .++++||||+| .|||+.
T Consensus 190 vinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~~~~~-~~~vkIIHY~~~~~KPW~~ 268 (333)
T PLN00176 190 VFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHPENVE-LDKVKVVHYCAAGSKPWRY 268 (333)
T ss_pred EEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhChhhcc-cCCcEEEEeeCCCCCCCCC
Confidence 99999999999999987666678899999999999 999999999999866555555444 57899999996 699985
Q ss_pred CCCCCCCcccccccccCCchHHHHHHHHHhhhH
Q 037463 262 YKDYDCNWDMVSRHKFASDSAHKKWWQVYDAMP 294 (344)
Q Consensus 262 ~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~~p 294 (344)
+...+||+.++.. ..+++||++|++..
T Consensus 269 -~~~~~~~~~~~~~-----~~~~~Ww~~~~~~~ 295 (333)
T PLN00176 269 -TGKEENMDREDIK-----MLVKKWWDIYNDES 295 (333)
T ss_pred -CCcccCCChHHHH-----HHHHHHHHHhcccc
Confidence 3556787765433 45899999999764
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.1e-32 Score=257.54 Aligned_cols=216 Identities=34% Similarity=0.527 Sum_probs=162.0
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCEEEEE---echhhHHHhhhccCCCcchhhhHhhhcc
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYRVYW---VHAKLLLLLLKQKDSYNEWNYSKLRVWQ 140 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~~y~---~~~~dl~~l~~~~~~ys~~ty~KL~i~~ 140 (344)
+++|+..|+.+......++| +++...+...+..++++. .. +.. +..++... ...+.++..+|+||++|+
T Consensus 15 ~a~vl~~SL~~~~~~~~~~v-l~~~~is~~~~~~L~~~~----~~-~~~v~~i~~~~~~~--~~~~~~~~~~~~kl~~~~ 86 (240)
T cd02537 15 GALVLGYSLRKVGSSYDLVV-LVTPGVSEESREALEEVG----WI-VREVEPIDPPDSAN--LLKRPRFKDTYTKLRLWN 86 (240)
T ss_pred HHHHHHHHHHhcCCCCCEEE-EECCCCCHHHHHHHHHcC----CE-EEecCccCCcchhh--hccchHHHHHhHHHHhcc
Confidence 55667777777666666644 566666666665555443 21 111 11111111 123456677999999999
Q ss_pred cCCcCEEEEEeCCccccCCchhhhcC-CcccccCCCC--CcccceEEEEeCChhhHHHHHHHHhhCCCCCCCChHHHHHH
Q 037463 141 LIEYDKIIFIDSDLLVLKNIDEFFFY-PEFSAAGTNK--VLFNSGVMVIEPSLCKFEDLTLKSFKVSSYNGGDQGFLNEV 217 (344)
Q Consensus 141 L~~ydKVLYLDaD~LVl~dIdeLF~l-~~iaAvpd~~--~yFNSGVmLinps~~~~~~l~~~~~~~~~~~~~DQdiLN~~ 217 (344)
+++|+||||||+|++|++||++||++ ..++|+++.. .|||||||+++++...++++++.+.+..++.++||++||.+
T Consensus 87 l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~ 166 (240)
T cd02537 87 LTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSY 166 (240)
T ss_pred ccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHH
Confidence 99999999999999999999999999 5688888754 79999999999999999999999887666888999999999
Q ss_pred hh-c--ccccCcccccccccccCCchhhhcCCCcEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhhh
Q 037463 218 FT-W--WHRLPKRINHLKVFSKQDDKEHQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDAM 293 (344)
Q Consensus 218 f~-~--~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~~ 293 (344)
|+ + |..||.+||++........+......+++||||+| .|||.....+.+++ ....+..++.||++|++|
T Consensus 167 ~~~~~~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~~~~~~~~~------~~~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 167 FSDRGIWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFIGGDKPWSWWRDPETKE------KDDYNELHQWWWDIYDEL 240 (240)
T ss_pred HcCCCCEeECCcceeeehhhhccCchhhcccCCcEEEEEeCCCCCCCCCcCCCccc------ccchHHHHHHHHHHHhhC
Confidence 99 8 99999999998765432222123457899999999 79999876554332 233467899999999875
No 3
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.97 E-value=3.8e-31 Score=258.86 Aligned_cols=204 Identities=20% Similarity=0.286 Sum_probs=154.8
Q ss_pred CcccEEEEEEcCCcchhhhhhhhHHhhhcCC-EEEEEechhhHHHhhhccCCCcchhhhHhhhcccC--CcCEEEEEeCC
Q 037463 77 VDRAVYVVFVGSCGAMVEMFRCDDLVEHAGD-YRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLI--EYDKIIFIDSD 153 (344)
Q Consensus 77 ~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~-~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~--~ydKVLYLDaD 153 (344)
....+.++++++..+..+...+.++....+. .-+|.++...+.-+ ....+++..+|+||++++++ +++||||||||
T Consensus 52 ~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~-~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~D 130 (334)
T PRK15171 52 PDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSL-PSTKNWTYATYFRFIIADYFIDKTDKVLYLDAD 130 (334)
T ss_pred CCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCC-cccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCC
Confidence 3446889999999999999999999887654 34566432223322 33568899999999999997 69999999999
Q ss_pred ccccCCchhhhcCC----cccccC-C------------------CCCcccceEEEEeCChhhHHHHHHHHhh----C---
Q 037463 154 LLVLKNIDEFFFYP----EFSAAG-T------------------NKVLFNSGVMVIEPSLCKFEDLTLKSFK----V--- 203 (344)
Q Consensus 154 ~LVl~dIdeLF~l~----~iaAvp-d------------------~~~yFNSGVmLinps~~~~~~l~~~~~~----~--- 203 (344)
+||++||++||+++ .+|||. + ...||||||||||++.|+.+++.+++.+ .
T Consensus 131 iiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~ 210 (334)
T PRK15171 131 IACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIV 210 (334)
T ss_pred EEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccc
Confidence 99999999999996 255551 1 1259999999999999998887766533 1
Q ss_pred CCCCCCChHHHHHHhh-cccccCcccccccccccCCc--hhhhcCCCcEEEEecC-CCCCCCCCCCCCCcccccccccCC
Q 037463 204 SSYNGGDQGFLNEVFT-WWHRLPKRINHLKVFSKQDD--KEHQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFAS 279 (344)
Q Consensus 204 ~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~~~~~~~~--~~~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~ 279 (344)
..+.++|||+||.+|. +|..||.+||++.+...... .......+|+||||+| .|||..+ +.++
T Consensus 211 ~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~----------~~~~--- 277 (334)
T PRK15171 211 SRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSW----------ADYP--- 277 (334)
T ss_pred cceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCC----------CCCc---
Confidence 2467799999999999 99999999999865422100 0112346899999999 5999864 2233
Q ss_pred chHHHHHHHHHhhhHHH
Q 037463 280 DSAHKKWWQVYDAMPKK 296 (344)
Q Consensus 280 d~~~~~WW~~~~~~p~~ 296 (344)
..+.||+|+.++|+.
T Consensus 278 --~~~~f~~~~~~spw~ 292 (334)
T PRK15171 278 --VSQYFLKAKEASPWK 292 (334)
T ss_pred --hHHHHHHHHhcCCCC
Confidence 368999999999964
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=4.6e-31 Score=246.44 Aligned_cols=196 Identities=26% Similarity=0.279 Sum_probs=145.6
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCE-EEEEechhhHHHhhhccCCCcchhhhHhhhcccC
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDY-RVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLI 142 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~-~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~ 142 (344)
+..|+.+|+...... .+.++++++..+..+...++++....+.. -+|.+...+..-......+++..+|+||++|+++
T Consensus 15 ~~~v~i~Sl~~~~~~-~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~ll 93 (246)
T cd00505 15 GAIVLMKSVLRHRTK-PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLV 93 (246)
T ss_pred HHHHHHHHHHHhCCC-CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHh
Confidence 345555666654444 78899999988888888888876544333 3455322222211122356788899999999999
Q ss_pred C-cCEEEEEeCCccccCCchhhhcCC----cccccCC------------------CCCcccceEEEEeCChhhHHHHHHH
Q 037463 143 E-YDKIIFIDSDLLVLKNIDEFFFYP----EFSAAGT------------------NKVLFNSGVMVIEPSLCKFEDLTLK 199 (344)
Q Consensus 143 ~-ydKVLYLDaD~LVl~dIdeLF~l~----~iaAvpd------------------~~~yFNSGVmLinps~~~~~~l~~~ 199 (344)
+ ++||||||+|+||++||++||+++ .+||+++ ...||||||||||++.|+++++++.
T Consensus 94 p~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~ 173 (246)
T cd00505 94 PDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFVVNLSKERRNQLLKV 173 (246)
T ss_pred hccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEEEechHHHHHHHHHH
Confidence 6 999999999999999999999997 3666654 1359999999999999998888765
Q ss_pred Hhh-----CCCCCCCChHHHHHHhh-c---ccccCcccccccccccCCch-hhhcCCCcEEEEecC-CCCCC
Q 037463 200 SFK-----VSSYNGGDQGFLNEVFT-W---WHRLPKRINHLKVFSKQDDK-EHQVGDGLYAIHYLG-LKPWM 260 (344)
Q Consensus 200 ~~~-----~~~~~~~DQdiLN~~f~-~---~~~Lp~~yN~~~~~~~~~~~-~~~~~~~~~IIHf~g-~KPW~ 260 (344)
..+ ..++.++|||+||.+|. + +..||++||++......... ..+...+++||||+| .|||.
T Consensus 174 ~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~ 245 (246)
T cd00505 174 ALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWN 245 (246)
T ss_pred HHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCC
Confidence 432 23577899999999999 6 99999999998754322211 233567999999999 69996
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.96 E-value=3.1e-30 Score=240.21 Aligned_cols=196 Identities=22% Similarity=0.274 Sum_probs=148.2
Q ss_pred chhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCC-EEEEEechhhHHHhhhccCCCcchhhhHhhhcccCC
Q 037463 65 DAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGD-YRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLIE 143 (344)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~-~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~~ 143 (344)
..++..|+........+.++++++..+...+-.++++....+. +-++.+..+++.......++++..+|+||+++++++
T Consensus 15 ~~~~l~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~ 94 (248)
T cd04194 15 LAVTIKSILANNSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLP 94 (248)
T ss_pred HHHHHHHHHhcCCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhc
Confidence 3344445555444357889999988888888888888776543 335565545444322246788889999999999985
Q ss_pred -cCEEEEEeCCccccCCchhhhcCC----cccccCC-----------------CCCcccceEEEEeCChhhHHHHHHHH-
Q 037463 144 -YDKIIFIDSDLLVLKNIDEFFFYP----EFSAAGT-----------------NKVLFNSGVMVIEPSLCKFEDLTLKS- 200 (344)
Q Consensus 144 -ydKVLYLDaD~LVl~dIdeLF~l~----~iaAvpd-----------------~~~yFNSGVmLinps~~~~~~l~~~~- 200 (344)
|+||||||+|+||++||++||+++ .+||+++ ...||||||||+|++.|+.+++.+.+
T Consensus 95 ~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~ 174 (248)
T cd04194 95 DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLKKWREENITEKLL 174 (248)
T ss_pred ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchheeHHHHHHhhhHHHHH
Confidence 999999999999999999999986 2566643 24699999999999999977666554
Q ss_pred ---hhC-CCCCCCChHHHHHHhh-cccccCcccccccccccCCc-------hhhhcCCCcEEEEecC-CCCCC
Q 037463 201 ---FKV-SSYNGGDQGFLNEVFT-WWHRLPKRINHLKVFSKQDD-------KEHQVGDGLYAIHYLG-LKPWM 260 (344)
Q Consensus 201 ---~~~-~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~~~~~~~~-------~~~~~~~~~~IIHf~g-~KPW~ 260 (344)
.+. ..+.++||++||.+|. +|..||.+||++........ ......++++||||+| .|||.
T Consensus 175 ~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 175 ELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred HHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 333 2467899999999999 89999999999886443211 1234568999999999 79997
No 6
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.96 E-value=8.7e-30 Score=241.17 Aligned_cols=205 Identities=17% Similarity=0.136 Sum_probs=143.7
Q ss_pred hhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcC-CEEEEEechhhHHHh-------------------hhccC
Q 037463 67 AVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAG-DYRVYWVHAKLLLLL-------------------LKQKD 126 (344)
Q Consensus 67 ~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~-~~~~y~~~~~dl~~l-------------------~~~~~ 126 (344)
++.+++.+..-...+.+|++|.......+....++....+ .+-+|.++...+.-. .....
T Consensus 16 ~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (257)
T cd06429 16 VINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTSNLKQRKPE 95 (257)
T ss_pred HHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhccccccccccCCcc
Confidence 3344444332336788999998766555544444433323 333565432222111 12346
Q ss_pred CCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCCCCCcccceEEEEeCChhhHHHHHHHHh
Q 037463 127 SYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGTNKVLFNSGVMVIEPSLCKFEDLTLKSF 201 (344)
Q Consensus 127 ~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd~~~yFNSGVmLinps~~~~~~l~~~~~ 201 (344)
+++..+|+||++|+++ +++||||||||+||++||++||+++. +||+++ ||||||||||++.|+.+++.+.+.
T Consensus 96 ~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---yfNsGV~linl~~wr~~~i~~~~~ 172 (257)
T cd06429 96 YISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---SWNPGVNVVNLTEWRRQNVTETYE 172 (257)
T ss_pred ccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---hcccceEEEeHHHHHhccHHHHHH
Confidence 7888999999999987 68999999999999999999999972 567777 999999999999999887765442
Q ss_pred ----hCC----C-CCCCChHHHHHHhh-cccccCccccccc-ccccCCchhhhcCCCcEEEEecC-CCCCCCCCCCCCCc
Q 037463 202 ----KVS----S-YNGGDQGFLNEVFT-WWHRLPKRINHLK-VFSKQDDKEHQVGDGLYAIHYLG-LKPWMCYKDYDCNW 269 (344)
Q Consensus 202 ----~~~----~-~~~~DQdiLN~~f~-~~~~Lp~~yN~~~-~~~~~~~~~~~~~~~~~IIHf~g-~KPW~~~~~y~~nw 269 (344)
+.. . ..++||++||.+|. ++..||++||++. ++..... .....+++||||+| .|||....
T Consensus 173 ~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~wN~~~l~~~~~~~--~~~~~~~~IIHy~G~~KPW~~~~------ 244 (257)
T cd06429 173 KWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSWHVRGLGYNYGIR--PQDIKAAAVLHFNGNMKPWLRTA------ 244 (257)
T ss_pred HHHHHhhhcccchhhcCCccHHHHHccCeeEECChHHcccCCccccccc--ccccCCcEEEEECCCCCCcCCCC------
Confidence 221 1 45689999999999 9999999999973 2211111 22356899999999 69999742
Q ss_pred ccccccccCCchHHHHHHHHHh
Q 037463 270 DMVSRHKFASDSAHKKWWQVYD 291 (344)
Q Consensus 270 ~~~~~~~~~~d~~~~~WW~~~~ 291 (344)
.+ ++++.||+|+.
T Consensus 245 ----~~-----~~~~~w~~yl~ 257 (257)
T cd06429 245 ----IP-----SYKELWEKYLS 257 (257)
T ss_pred ----CC-----hHHHHHHHHhC
Confidence 22 35789999863
No 7
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.96 E-value=2e-29 Score=240.73 Aligned_cols=223 Identities=24% Similarity=0.274 Sum_probs=154.2
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhh---hhhHHhhhcCCEEEEEechhhHHHhhhccCCCcchhhhHhhhcc
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMF---RCDDLVEHAGDYRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQ 140 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~---~~~~l~~~~~~~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~ 140 (344)
|++++..++++.++.++. |+++|+..+....- +...+. ...++.+..+ +..........++. +|+||.+|+
T Consensus 15 gAlvL~~sLr~~gs~~dl-VvLvt~~~~~~~~~~~~~~~~~l-~~~~~~v~~v---~~~~~~~~~~~~~~-~~tKl~~~~ 88 (278)
T cd06914 15 NALILFEQLRRLGSKAKL-VLLVPETLLDRNLDDFVRRDLLL-ARDKVIVKLI---PVIIASGGDAYWAK-SLTKLRAFN 88 (278)
T ss_pred HHHHHHHHHHHhCCCCCE-EEEECCCCChhhhhhHHHHHHHh-hccCcEEEEc---CcccCCCCCccHHH-HHHHHHhcc
Confidence 789999999988887776 88888766543321 222222 2233334332 11111111223333 699999999
Q ss_pred cCCcCEEEEEeCCccccCCchhhhcCC-c-ccccCCCCCcccceEEEEeCChhhHHHHHHHHhhCCC--CCCCChHHHHH
Q 037463 141 LIEYDKIIFIDSDLLVLKNIDEFFFYP-E-FSAAGTNKVLFNSGVMVIEPSLCKFEDLTLKSFKVSS--YNGGDQGFLNE 216 (344)
Q Consensus 141 L~~ydKVLYLDaD~LVl~dIdeLF~l~-~-iaAvpd~~~yFNSGVmLinps~~~~~~l~~~~~~~~~--~~~~DQdiLN~ 216 (344)
+++|+||||||||+||++|||+||+++ . ..|+|....|||||||||+|+.++|++|++.+.+..+ ..++|||+||.
T Consensus 89 l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~~~~DQdiLN~ 168 (278)
T cd06914 89 QTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTEILPAYLNKKNEYDMDLINE 168 (278)
T ss_pred ccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHHHHHhcccCCCCCChHHHHH
Confidence 999999999999999999999999998 2 2466776679999999999999999999999876533 36789999999
Q ss_pred Hhh-c-------ccccCcc-cccccccccC--------C----chh---hhcCCCcEEEEecC---CCCCCCCCCC--CC
Q 037463 217 VFT-W-------WHRLPKR-INHLKVFSKQ--------D----DKE---HQVGDGLYAIHYLG---LKPWMCYKDY--DC 267 (344)
Q Consensus 217 ~f~-~-------~~~Lp~~-yN~~~~~~~~--------~----~~~---~~~~~~~~IIHf~g---~KPW~~~~~y--~~ 267 (344)
+|. + +..||.+ ||++++.... + .+. .+...++++|||++ +|||...... .|
T Consensus 169 ~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~~~~~~ 248 (278)
T cd06914 169 EFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNLEDIYC 248 (278)
T ss_pred HHhCCccccCcceEEcCccccccCChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCHHHHHH
Confidence 999 8 9999986 9999863321 1 111 12346899999997 5999974321 11
Q ss_pred Cccc----ccccccCCchHHHHHHHHHhh
Q 037463 268 NWDM----VSRHKFASDSAHKKWWQVYDA 292 (344)
Q Consensus 268 nw~~----~~~~~~~~d~~~~~WW~~~~~ 292 (344)
.... .....-..+..+++|+.+|++
T Consensus 249 ~~~~~~~~~~~~~~~~c~~~~iW~~~y~~ 277 (278)
T cd06914 249 IEKIYCKMVKPRLEDDCRACDLWNSLYAD 277 (278)
T ss_pred hCCccccCCCCCccCcchHHHHHHHHhhc
Confidence 1000 011111245778999999875
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.96 E-value=3.9e-29 Score=239.36 Aligned_cols=206 Identities=15% Similarity=0.070 Sum_probs=145.8
Q ss_pred cccEEEEEEcCCcchhhhhhhhHHhhhcCCEE-EEEechhhHHHh-hhccCCCcch-hhhHhhhcccCC--cCEEEEEeC
Q 037463 78 DRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYR-VYWVHAKLLLLL-LKQKDSYNEW-NYSKLRVWQLIE--YDKIIFIDS 152 (344)
Q Consensus 78 ~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~-~y~~~~~dl~~l-~~~~~~ys~~-ty~KL~i~~L~~--ydKVLYLDa 152 (344)
...+.++++++..+...+..+.+.....+..+ .|.++. ....+ ..++.+|+.. +|+||+++++++ ++|||||||
T Consensus 28 ~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~-~~~~~~~~~~~~~s~~y~y~RL~ip~llp~~~dkvLYLD~ 106 (280)
T cd06431 28 RNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEE-LKSRVSWIPNKHYSGIYGLMKLVLTEALPSDLEKVIVLDT 106 (280)
T ss_pred CCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHH-hhhhhccCcccchhhHHHHHHHHHHHhchhhcCEEEEEcC
Confidence 45688999999888888888876665554444 456421 01111 1234577765 889999999984 999999999
Q ss_pred CccccCCchhhhcC--C----cc-cccCC------------------CCCcccceEEEEeCChhhHHHHHHHHh----h-
Q 037463 153 DLLVLKNIDEFFFY--P----EF-SAAGT------------------NKVLFNSGVMVIEPSLCKFEDLTLKSF----K- 202 (344)
Q Consensus 153 D~LVl~dIdeLF~l--~----~i-aAvpd------------------~~~yFNSGVmLinps~~~~~~l~~~~~----~- 202 (344)
|+||++||++||++ + .+ ||+++ .+.||||||||||++.|+.+++.+++. +
T Consensus 107 Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~ 186 (280)
T cd06431 107 DITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLDKLRKMKWESMWRLTAERE 186 (280)
T ss_pred CEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHHHHHhhCHHHHHHHHHHHH
Confidence 99999999999987 2 13 33221 134999999999999999887766543 2
Q ss_pred ---CCCCCCCChHHHHHHhh-c---ccccCcccccccccccCCchhhhcCCCcEEEEecC-CCCCCCCCCCCCCcccccc
Q 037463 203 ---VSSYNGGDQGFLNEVFT-W---WHRLPKRINHLKVFSKQDDKEHQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVSR 274 (344)
Q Consensus 203 ---~~~~~~~DQdiLN~~f~-~---~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~~ 274 (344)
.....++|||+||.+|. + +..||++||++.+......+......+|+||||+| .|||.... ..
T Consensus 187 ~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~IIHf~g~~KPW~~~~---------~~ 257 (280)
T cd06431 187 LMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNK---------HV 257 (280)
T ss_pred HhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCccchHhHhhcCcCCCEEEEeCCCCCCCCcCC---------CC
Confidence 23467899999999999 7 78999999998753322112222357899999999 59998631 11
Q ss_pred cccCCchHHHHHHHHHhhhHHHHH
Q 037463 275 HKFASDSAHKKWWQVYDAMPKKLQ 298 (344)
Q Consensus 275 ~~~~~d~~~~~WW~~~~~~p~~l~ 298 (344)
+ .+++.|-+|.+..-..|+
T Consensus 258 ~-----~~~~~~~~~~~~~~~~l~ 276 (280)
T cd06431 258 E-----FFRNLYLTFLEYDGNLLR 276 (280)
T ss_pred h-----HHHHHHHHHHhcCchhhh
Confidence 3 357888888875444443
No 9
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.95 E-value=4.6e-28 Score=221.13 Aligned_cols=199 Identities=26% Similarity=0.368 Sum_probs=137.8
Q ss_pred cchhhhcCccCCCCc-ccEEEEEEcCCcchhhhhhhhHHhhhcCCE-EEEEechhhHH---HhhhccCCCcchhhhHhhh
Q 037463 64 GDAAVESGWVKPDVD-RAVYVVFVGSCGAMVEMFRCDDLVEHAGDY-RVYWVHAKLLL---LLLKQKDSYNEWNYSKLRV 138 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~-~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~-~~y~~~~~dl~---~l~~~~~~ys~~ty~KL~i 138 (344)
+.+++..|+..+..+ ...+|+++++..+......+..+..+.... -++......+. .-.....+++..+|.||++
T Consensus 13 ~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~i 92 (250)
T PF01501_consen 13 GAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFARLFI 92 (250)
T ss_dssp HHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGGGGGH
T ss_pred HHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHHHhhh
Confidence 555666677665554 677899999888777777776666554332 23332112211 1134556778889999999
Q ss_pred ccc-CCcCEEEEEeCCccccCCchhhhcCCc----ccccCC--------------------CCCcccceEEEEeCChhhH
Q 037463 139 WQL-IEYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT--------------------NKVLFNSGVMVIEPSLCKF 193 (344)
Q Consensus 139 ~~L-~~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd--------------------~~~yFNSGVmLinps~~~~ 193 (344)
+++ .+||||||||+||||++||++||+++. ++|+.+ ...+|||||||++++.+++
T Consensus 93 ~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~ 172 (250)
T PF01501_consen 93 PDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRK 172 (250)
T ss_dssp HHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHH
T ss_pred HHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEEEEeechhhh
Confidence 999 799999999999999999999999752 344322 4689999999999999999
Q ss_pred HHHHHHHhh----C-CCCCCCChHHHHHHhh-cccccCcccccccccc-cCCchhhhcCCCcEEEEecC-CCCCCCC
Q 037463 194 EDLTLKSFK----V-SSYNGGDQGFLNEVFT-WWHRLPKRINHLKVFS-KQDDKEHQVGDGLYAIHYLG-LKPWMCY 262 (344)
Q Consensus 194 ~~l~~~~~~----~-~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~~~~-~~~~~~~~~~~~~~IIHf~g-~KPW~~~ 262 (344)
+++.+.+.+ . ..+.++||++||.+|. .+..||.+||++.... ...........+++||||+| .|||...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 173 ENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred hhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 888776543 2 2467899999999999 9999999999998654 11122234568999999999 8999863
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=5.6e-26 Score=221.16 Aligned_cols=184 Identities=21% Similarity=0.298 Sum_probs=148.9
Q ss_pred cEEEEEEcCCcchhhhhhhhHHhhhcCCEE-EEEechhhHHHhhhccCCCcchhhhHhhhcccC-CcCEEEEEeCCcccc
Q 037463 80 AVYVVFVGSCGAMVEMFRCDDLVEHAGDYR-VYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVL 157 (344)
Q Consensus 80 ~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~-~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl 157 (344)
....|++.+..+..+...++++++..+... ++.+....+......+.+|+..+|.||+++++. +|+|+||||+|+||+
T Consensus 32 ~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~ 111 (325)
T COG1442 32 FYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPPFTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFC 111 (325)
T ss_pred cEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhhcccccccchHHHHHHHHHHHHhccccCeEEEEecCEEEc
Confidence 577899999999999999999999886555 466433444433336789999999999999997 789999999999999
Q ss_pred CCchhhhcCCc----ccccCC------------------CCCcccceEEEEeCChhhHHHHHHHHhh-----CCCCCCCC
Q 037463 158 KNIDEFFFYPE----FSAAGT------------------NKVLFNSGVMVIEPSLCKFEDLTLKSFK-----VSSYNGGD 210 (344)
Q Consensus 158 ~dIdeLF~l~~----iaAvpd------------------~~~yFNSGVmLinps~~~~~~l~~~~~~-----~~~~~~~D 210 (344)
++|++||.++. +|||.| .+.|||||||++|+..|+.+++.+++.+ ...+..+|
T Consensus 112 g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~D 191 (325)
T COG1442 112 GDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPD 191 (325)
T ss_pred CcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCcc
Confidence 99999999972 556543 3689999999999999998888776543 24577899
Q ss_pred hHHHHHHhh-cccccCcccccccccccCCch--hhhcCCCcEEEEecCC-CCCCCCC
Q 037463 211 QGFLNEVFT-WWHRLPKRINHLKVFSKQDDK--EHQVGDGLYAIHYLGL-KPWMCYK 263 (344)
Q Consensus 211 QdiLN~~f~-~~~~Lp~~yN~~~~~~~~~~~--~~~~~~~~~IIHf~g~-KPW~~~~ 263 (344)
|++||.+|+ +|..||.+||++.++...... .......+.|+||+|. |||+...
T Consensus 192 QdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~ 248 (325)
T COG1442 192 QDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDS 248 (325)
T ss_pred ccHHHHHHHhhhhccCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCcc
Confidence 999999999 999999999999876543222 1345688999999995 9999863
No 11
>PLN02867 Probable galacturonosyltransferase
Probab=99.91 E-value=1.7e-24 Score=219.91 Aligned_cols=158 Identities=15% Similarity=0.282 Sum_probs=117.3
Q ss_pred CcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC----------------------------
Q 037463 128 YNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT---------------------------- 174 (344)
Q Consensus 128 ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd---------------------------- 174 (344)
.|..+|+||++|+++ +++||||||+|+||++||++||+++. ++||.+
T Consensus 328 lS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~ 407 (535)
T PLN02867 328 LSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNL 407 (535)
T ss_pred hhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccC
Confidence 377799999999997 68999999999999999999999972 566632
Q ss_pred --CCCcccceEEEEeCChhhHHHHHHHHh----hCC--CCCCCChHHHHH---Hhh-cccccCcccccccccccCCc-hh
Q 037463 175 --NKVLFNSGVMVIEPSLCKFEDLTLKSF----KVS--SYNGGDQGFLNE---VFT-WWHRLPKRINHLKVFSKQDD-KE 241 (344)
Q Consensus 175 --~~~yFNSGVmLinps~~~~~~l~~~~~----~~~--~~~~~DQdiLN~---~f~-~~~~Lp~~yN~~~~~~~~~~-~~ 241 (344)
...||||||||||++.|+.+++.+.+. ... .....|||.||. +|. ++..||++||+.. ...... ..
T Consensus 408 ~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~g-Lgy~~~~~~ 486 (535)
T PLN02867 408 DQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAG-LGSRPPEVP 486 (535)
T ss_pred CCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccC-CCcccccch
Confidence 124788999999999999998887643 222 245689999996 788 9999999999843 211111 12
Q ss_pred hhcCCCcEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhhhHHHHHHHhh
Q 037463 242 HQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDAMPKKLQQYCA 302 (344)
Q Consensus 242 ~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~~p~~l~~~~~ 302 (344)
.+..++++||||+| .|||.... .+ ++++.|-+|.+ ......+-|.
T Consensus 487 ~~~i~~paIIHYnG~~KPW~e~~----------~~-----~yR~~W~kyl~-~~~~fl~~cn 532 (535)
T PLN02867 487 REILESAAVLHFSGPAKPWLEIG----------FP-----EVRSLWYRHVN-FSDKFIRKCR 532 (535)
T ss_pred hhhcCCcEEEEECCCCCcccccC----------CC-----chhHHHHHhcC-ccchHHHhcc
Confidence 23467999999999 69999742 22 34778866665 3333444464
No 12
>PLN02659 Probable galacturonosyltransferase
Probab=99.89 E-value=7.4e-24 Score=214.76 Aligned_cols=152 Identities=16% Similarity=0.237 Sum_probs=115.8
Q ss_pred CCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC---------------------------
Q 037463 127 SYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT--------------------------- 174 (344)
Q Consensus 127 ~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd--------------------------- 174 (344)
..|..+|+||++|+++ +++||||||+|+||++||++||+++. +||+.+
T Consensus 326 ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~y 405 (534)
T PLN02659 326 YNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKN 405 (534)
T ss_pred ceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhc
Confidence 3477899999999997 69999999999999999999999972 444432
Q ss_pred ---CCCcccceEEEEeCChhhHHHHHHHHhh----C--CCCCCCChHHH---HHHhh-cccccCcccccccccccCCchh
Q 037463 175 ---NKVLFNSGVMVIEPSLCKFEDLTLKSFK----V--SSYNGGDQGFL---NEVFT-WWHRLPKRINHLKVFSKQDDKE 241 (344)
Q Consensus 175 ---~~~yFNSGVmLinps~~~~~~l~~~~~~----~--~~~~~~DQdiL---N~~f~-~~~~Lp~~yN~~~~~~~~~~~~ 241 (344)
...||||||||||++.|+.+++.+.+.+ . ......|||+| |.+|. ++..||++||++....... ..
T Consensus 406 Fn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~-~~ 484 (534)
T PLN02659 406 FDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQEN-TS 484 (534)
T ss_pred cCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCccccc-cc
Confidence 1237889999999999998888766433 2 23566899999 58898 9999999999864221111 11
Q ss_pred hhcCCCcEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhhhH
Q 037463 242 HQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDAMP 294 (344)
Q Consensus 242 ~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~~p 294 (344)
.+..++++||||+| .|||... +.+. +++.|-+|.+...
T Consensus 485 ~~~i~~paIIHYnG~~KPW~~~----------~~~~-----yr~~W~kYl~~s~ 523 (534)
T PLN02659 485 LADAESAGVVHFNGRAKPWLDI----------AFPQ-----LRPLWAKYIDSSD 523 (534)
T ss_pred ccccCCcEEEEECCCCCccccc----------cCCc-----chhHHHHHhccCC
Confidence 23457899999999 6999975 2233 4778988888643
No 13
>PLN02769 Probable galacturonosyltransferase
Probab=99.89 E-value=3.1e-23 Score=213.77 Aligned_cols=150 Identities=18% Similarity=0.215 Sum_probs=115.2
Q ss_pred CCCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC-------------------CCCcccc
Q 037463 126 DSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT-------------------NKVLFNS 181 (344)
Q Consensus 126 ~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd-------------------~~~yFNS 181 (344)
...+..+|+||+||+++ +++||||||+|+||++||++||+++. +||+.+ ...||||
T Consensus 433 eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyFNS 512 (629)
T PLN02769 433 EYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAWMS 512 (629)
T ss_pred ccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCcccccccc
Confidence 44577899999999987 58999999999999999999999872 556542 1347899
Q ss_pred eEEEEeCChhhHHHHHHHHh----hC-----CCCCCCChHHHHHHhh-cccccCccccccc-ccccCCchhhhcCCCcEE
Q 037463 182 GVMVIEPSLCKFEDLTLKSF----KV-----SSYNGGDQGFLNEVFT-WWHRLPKRINHLK-VFSKQDDKEHQVGDGLYA 250 (344)
Q Consensus 182 GVmLinps~~~~~~l~~~~~----~~-----~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~-~~~~~~~~~~~~~~~~~I 250 (344)
||||||++.|+.+++.+.+. +. ..+..++|..+|.+|. ++..||++||++. ++..+- ..+..++++|
T Consensus 513 GVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~i--~~~~i~~paI 590 (629)
T PLN02769 513 GLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYGI--DEQAIKKAAV 590 (629)
T ss_pred CeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHccccccccccc--cccccCCcEE
Confidence 99999999999887766533 11 2244578888999999 9999999999874 222111 1234679999
Q ss_pred EEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhh
Q 037463 251 IHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDA 292 (344)
Q Consensus 251 IHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~ 292 (344)
|||+| .|||.... . ..+++.||+|++.
T Consensus 591 IHYnG~~KPW~e~~----------i-----~~yr~~W~kYl~~ 618 (629)
T PLN02769 591 LHYNGNMKPWLELG----------I-----PKYKKYWKRFLNR 618 (629)
T ss_pred EEECCCCCCccCCC----------C-----ChHHHHHHHHhcc
Confidence 99999 69999741 1 2358899999984
No 14
>PLN02870 Probable galacturonosyltransferase
Probab=99.89 E-value=1.2e-23 Score=213.13 Aligned_cols=136 Identities=18% Similarity=0.243 Sum_probs=106.3
Q ss_pred CCCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC--------------------------
Q 037463 126 DSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT-------------------------- 174 (344)
Q Consensus 126 ~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd-------------------------- 174 (344)
...|..+|+||++|+++ +++||||||+|+||++||++||+++. ++|+.+
T Consensus 324 ~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~ 403 (533)
T PLN02870 324 KYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAK 403 (533)
T ss_pred cccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhc
Confidence 44588899999999997 68999999999999999999999972 445443
Q ss_pred ----CCCcccceEEEEeCChhhHHHHHHHHhh----C--CCCCCCChHHH---HHHhh-cccccCcccccccccccCCch
Q 037463 175 ----NKVLFNSGVMVIEPSLCKFEDLTLKSFK----V--SSYNGGDQGFL---NEVFT-WWHRLPKRINHLKVFSKQDDK 240 (344)
Q Consensus 175 ----~~~yFNSGVmLinps~~~~~~l~~~~~~----~--~~~~~~DQdiL---N~~f~-~~~~Lp~~yN~~~~~~~~~~~ 240 (344)
...||||||||||++.|+.+++.+.+.+ . ..+.+.|||.| |.+|. ++..||++||++.... ....
T Consensus 404 ~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy-~~~~ 482 (533)
T PLN02870 404 NLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGY-QSKT 482 (533)
T ss_pred ccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCC-cccc
Confidence 1235669999999999998888766432 2 24567999999 57888 9999999999864221 1112
Q ss_pred hhhcCCCcEEEEecC-CCCCCCC
Q 037463 241 EHQVGDGLYAIHYLG-LKPWMCY 262 (344)
Q Consensus 241 ~~~~~~~~~IIHf~g-~KPW~~~ 262 (344)
..+..++++||||+| .|||...
T Consensus 483 ~~~~i~~aaIIHY~G~~KPW~~~ 505 (533)
T PLN02870 483 NIESVKKAAVIHYNGQSKPWLEI 505 (533)
T ss_pred cccccCCcEEEEECCCCCCcccc
Confidence 234567899999999 6999864
No 15
>PLN02829 Probable galacturonosyltransferase
Probab=99.89 E-value=4.8e-23 Score=211.46 Aligned_cols=151 Identities=19% Similarity=0.213 Sum_probs=114.6
Q ss_pred CCCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC-------------------------C
Q 037463 126 DSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT-------------------------N 175 (344)
Q Consensus 126 ~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd-------------------------~ 175 (344)
.++|..+|+||++|+++ +++||||||+|+||++||++||+++. +||+.+ .
T Consensus 438 ~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~ 517 (639)
T PLN02829 438 KYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPH 517 (639)
T ss_pred chhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCc
Confidence 45678899999999998 58999999999999999999999972 444432 2
Q ss_pred CCcccceEEEEeCChhhHHHHHHHHhh----CCCCCCCChHHHHHH---hh-cccccCcccccccccccCCchhhhcCCC
Q 037463 176 KVLFNSGVMVIEPSLCKFEDLTLKSFK----VSSYNGGDQGFLNEV---FT-WWHRLPKRINHLKVFSKQDDKEHQVGDG 247 (344)
Q Consensus 176 ~~yFNSGVmLinps~~~~~~l~~~~~~----~~~~~~~DQdiLN~~---f~-~~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 247 (344)
..||||||||||++.|+.+++.+.+.. ...-...|||.||.. |. ++..|+++||++..... ........++
T Consensus 518 ~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~-~~v~~~~i~~ 596 (639)
T PLN02829 518 ACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYN-PNVNQRDIER 596 (639)
T ss_pred ccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCCCC-cccchhcccC
Confidence 358999999999999999888766442 222245889999975 46 99999999999863221 1112345678
Q ss_pred cEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhh
Q 037463 248 LYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDA 292 (344)
Q Consensus 248 ~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~ 292 (344)
+.||||+| .|||... +.+. +++.|.+|.+.
T Consensus 597 aaIIHynG~~KPWle~----------~i~~-----yr~lW~kYl~~ 627 (639)
T PLN02829 597 AAVIHYNGNMKPWLEI----------GIPK-----YRNYWSKYVDY 627 (639)
T ss_pred CeEEEECCCCCccccC----------Cccc-----chHHHHHHHhc
Confidence 99999999 6999974 2233 46788888763
No 16
>PLN02523 galacturonosyltransferase
Probab=99.88 E-value=1e-22 Score=207.11 Aligned_cols=151 Identities=19% Similarity=0.210 Sum_probs=115.7
Q ss_pred CCCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCCC------------------CCcccc-
Q 037463 126 DSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGTN------------------KVLFNS- 181 (344)
Q Consensus 126 ~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd~------------------~~yFNS- 181 (344)
...|..+|+||++|+++ +++||||||+|+||++||++||+++. ++|+.+. ..|||+
T Consensus 358 ~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~ 437 (559)
T PLN02523 358 KYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPK 437 (559)
T ss_pred chhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCC
Confidence 34577899999999997 69999999999999999999999873 4555431 136776
Q ss_pred ------eEEEEeCChhhHHHHHHHHhh----CCCCCCCChHHHH---HHhh-cccccCcccccccccccCCchhhhcCCC
Q 037463 182 ------GVMVIEPSLCKFEDLTLKSFK----VSSYNGGDQGFLN---EVFT-WWHRLPKRINHLKVFSKQDDKEHQVGDG 247 (344)
Q Consensus 182 ------GVmLinps~~~~~~l~~~~~~----~~~~~~~DQdiLN---~~f~-~~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 247 (344)
||||||++.|+.+++++.... .......|||.|| .+|. ++..|+++||++...... ....+..++
T Consensus 438 aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~gri~~LD~rWNvlglGy~~-~i~~~~i~~ 516 (559)
T PLN02523 438 ACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNP-SISMDEIRN 516 (559)
T ss_pred cccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcCceEecCchhhccCCccCC-CccccccCC
Confidence 999999999999998887541 2345678999996 7888 999999999987532111 111234578
Q ss_pred cEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhh
Q 037463 248 LYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDA 292 (344)
Q Consensus 248 ~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~ 292 (344)
+.||||+| .|||.... .+ .+++.||+|++.
T Consensus 517 paIIHYnG~~KPWle~~----------i~-----~yr~~W~kYl~~ 547 (559)
T PLN02523 517 AAVIHFNGNMKPWLDIA----------MN-----QFKPLWTKYVDY 547 (559)
T ss_pred CEEEEECCCCCccccCC----------CC-----cchHHHHHHHcc
Confidence 99999999 69998641 12 247899999884
No 17
>PLN02718 Probable galacturonosyltransferase
Probab=99.88 E-value=1.2e-22 Score=208.59 Aligned_cols=194 Identities=15% Similarity=0.127 Sum_probs=136.8
Q ss_pred ccEEEEEEcCCcchhhhhhhhHHhhhcC-CEEEEEechhhHHHh-----------h-hccCCCcchhhhHhhhcccC-Cc
Q 037463 79 RAVYVVFVGSCGAMVEMFRCDDLVEHAG-DYRVYWVHAKLLLLL-----------L-KQKDSYNEWNYSKLRVWQLI-EY 144 (344)
Q Consensus 79 ~~~~v~~~s~c~p~~~~~~~~~l~~~~~-~~~~y~~~~~dl~~l-----------~-~~~~~ys~~ty~KL~i~~L~-~y 144 (344)
..+.+|++|+......+.....+....+ .+-+|.+ .|+.++ . ...++++..+|+||++++++ ++
T Consensus 341 ~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~I--ddf~~lp~~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~l 418 (603)
T PLN02718 341 EKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNI--DDMNVLPADYNSLLMKQNSHDPRYISALNHARFYLPDIFPGL 418 (603)
T ss_pred CcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEec--chhccccccchhhhhhccccccccccHHHHHHHHHHHHhccc
Confidence 3688999998776666655544444333 3335553 233322 1 12356788899999999987 68
Q ss_pred CEEEEEeCCccccCCchhhhcCCc----ccccCC----------------------------CCCcccceEEEEeCChhh
Q 037463 145 DKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT----------------------------NKVLFNSGVMVIEPSLCK 192 (344)
Q Consensus 145 dKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd----------------------------~~~yFNSGVmLinps~~~ 192 (344)
+||||||+|+||++||++||+++. +||+.+ ...||||||||||++.|+
T Consensus 419 ~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~CyfNsGVlLIDLk~WR 498 (603)
T PLN02718 419 NKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKACTWAFGMNLFDLEEWR 498 (603)
T ss_pred CEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCccccccceEEEeHHHHH
Confidence 999999999999999999999872 334322 124689999999999999
Q ss_pred HHHHHHHHh----hCCCCCCCChHHHH---HHhh-cccccCcccccccc-cccCCchhhhcCCCcEEEEecC-CCCCCCC
Q 037463 193 FEDLTLKSF----KVSSYNGGDQGFLN---EVFT-WWHRLPKRINHLKV-FSKQDDKEHQVGDGLYAIHYLG-LKPWMCY 262 (344)
Q Consensus 193 ~~~l~~~~~----~~~~~~~~DQdiLN---~~f~-~~~~Lp~~yN~~~~-~~~~~~~~~~~~~~~~IIHf~g-~KPW~~~ 262 (344)
.+++.+.+. ........|||.|| .+|. ++..||++||.+.. +..+. ......++.||||+| .|||...
T Consensus 499 eenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i--~~~~i~~aaIIHYnG~~KPWle~ 576 (603)
T PLN02718 499 RQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGV--GASDIEQAAVIHYDGVMKPWLDI 576 (603)
T ss_pred hcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCccccccc--cccccCCCEEEEECCCCCccccC
Confidence 988876543 33333567899987 8888 99999999998762 21111 112467899999999 6999974
Q ss_pred CCCCCCcccccccccCCchHHHHHHHHHh
Q 037463 263 KDYDCNWDMVSRHKFASDSAHKKWWQVYD 291 (344)
Q Consensus 263 ~~y~~nw~~~~~~~~~~d~~~~~WW~~~~ 291 (344)
. . ..++..|-+|-+
T Consensus 577 ~----------i-----~~yr~~W~k~v~ 590 (603)
T PLN02718 577 G----------I-----GKYKRYWNIHVP 590 (603)
T ss_pred C----------h-----hhHHHHHHhhcC
Confidence 1 1 235677777766
No 18
>PLN02742 Probable galacturonosyltransferase
Probab=99.87 E-value=2e-22 Score=204.64 Aligned_cols=153 Identities=16% Similarity=0.238 Sum_probs=116.8
Q ss_pred CCCcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC-------------------------C
Q 037463 126 DSYNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT-------------------------N 175 (344)
Q Consensus 126 ~~ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd-------------------------~ 175 (344)
...+..+|.||++|+++ +++||||||+|+||.+||++||+++. +||+++ .
T Consensus 334 ~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~ 413 (534)
T PLN02742 334 KYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPD 413 (534)
T ss_pred ccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCC
Confidence 34567799999999987 58999999999999999999999972 455432 2
Q ss_pred CCcccceEEEEeCChhhHHHHHHHHh---h-CCCCCCCChHHHHHH---hh-cccccCccccccc-ccccCCchhhhcCC
Q 037463 176 KVLFNSGVMVIEPSLCKFEDLTLKSF---K-VSSYNGGDQGFLNEV---FT-WWHRLPKRINHLK-VFSKQDDKEHQVGD 246 (344)
Q Consensus 176 ~~yFNSGVmLinps~~~~~~l~~~~~---~-~~~~~~~DQdiLN~~---f~-~~~~Lp~~yN~~~-~~~~~~~~~~~~~~ 246 (344)
..+||+||||||++.|+.+++.+.+. + .......|||.||.. |. ++..||++||+.. ++..+ -.....+
T Consensus 414 aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv~gLG~~~~--v~~~~i~ 491 (534)
T PLN02742 414 ACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHVLGLGYDTN--IDPRLIE 491 (534)
T ss_pred ccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhheecccccccc--cchhhcc
Confidence 36899999999999999988877543 2 234566899999964 77 9999999999975 22111 1123567
Q ss_pred CcEEEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHhhhHH
Q 037463 247 GLYAIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYDAMPK 295 (344)
Q Consensus 247 ~~~IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~~~p~ 295 (344)
++.||||+| .|||... +.+. +++.|++|.+....
T Consensus 492 ~aaILHynG~~KPWl~~----------~i~~-----yr~~W~kYl~~s~~ 526 (534)
T PLN02742 492 SAAVLHFNGNMKPWLKL----------AIER-----YKPLWERYVNYSHP 526 (534)
T ss_pred CCeEEEECCCCCccccc----------CCcc-----cchHHHHHHccCCH
Confidence 999999999 5999974 2233 36799999886543
No 19
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.87 E-value=3.3e-22 Score=205.10 Aligned_cols=148 Identities=18% Similarity=0.204 Sum_probs=113.8
Q ss_pred CcchhhhHhhhcccC-CcCEEEEEeCCccccCCchhhhcCCc----ccccCC-------------------------CCC
Q 037463 128 YNEWNYSKLRVWQLI-EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAGT-------------------------NKV 177 (344)
Q Consensus 128 ys~~ty~KL~i~~L~-~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvpd-------------------------~~~ 177 (344)
.|..+|+||++|+++ +++||||||+|+||++||++||+++. +||+.+ ...
T Consensus 458 lS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aC 537 (657)
T PLN02910 458 LSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNAC 537 (657)
T ss_pred hhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCc
Confidence 477799999999997 58999999999999999999999972 334421 134
Q ss_pred cccceEEEEeCChhhHHHHHHHHh---h-CCCCCCCChHHHH---HHhh-cccccCcccccccccccCCchhhhcCCCcE
Q 037463 178 LFNSGVMVIEPSLCKFEDLTLKSF---K-VSSYNGGDQGFLN---EVFT-WWHRLPKRINHLKVFSKQDDKEHQVGDGLY 249 (344)
Q Consensus 178 yFNSGVmLinps~~~~~~l~~~~~---~-~~~~~~~DQdiLN---~~f~-~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~ 249 (344)
|||+||||||++.|+.+++.+.+. + .......|||.|| .+|. ++..|+++||.+.... .........+++.
T Consensus 538 yfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGy-d~~v~~~~i~~AA 616 (657)
T PLN02910 538 GWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGY-DPALNQTEIENAA 616 (657)
T ss_pred eeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCCC-CcccccccccCcE
Confidence 666799999999999988877543 2 2456778999999 5777 9999999999986322 1112234567899
Q ss_pred EEEecC-CCCCCCCCCCCCCcccccccccCCchHHHHHHHHHh
Q 037463 250 AIHYLG-LKPWMCYKDYDCNWDMVSRHKFASDSAHKKWWQVYD 291 (344)
Q Consensus 250 IIHf~g-~KPW~~~~~y~~nw~~~~~~~~~~d~~~~~WW~~~~ 291 (344)
||||+| .|||... +.+. +++.|-+|++
T Consensus 617 VLHynG~~KPWl~l----------~i~~-----Yr~~W~kYl~ 644 (657)
T PLN02910 617 VVHYNGNYKPWLDL----------AIAK-----YKPYWSRYVQ 644 (657)
T ss_pred EEEeCCCCCccccc----------Cccc-----chHHHHHHcc
Confidence 999999 6999974 2233 4678888877
No 20
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.86 E-value=3.5e-22 Score=188.26 Aligned_cols=170 Identities=16% Similarity=0.098 Sum_probs=127.3
Q ss_pred ccEEEEEEcCCcchhhhhhhhHHhhhcCCEE-EEEechhhHHHhhhc-cCCCcchhhhHhhhcccC--CcCEEEEEeCCc
Q 037463 79 RAVYVVFVGSCGAMVEMFRCDDLVEHAGDYR-VYWVHAKLLLLLLKQ-KDSYNEWNYSKLRVWQLI--EYDKIIFIDSDL 154 (344)
Q Consensus 79 ~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~-~y~~~~~dl~~l~~~-~~~ys~~ty~KL~i~~L~--~ydKVLYLDaD~ 154 (344)
..+.++++++..+..+..++.+++...+... +|.+.. ...+... ......++|.||.+..++ +++||||||+|+
T Consensus 29 ~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i~i~~--~~~~~~~~~~~~~~~~y~rL~~~~lLP~~vdkvLYLD~Di 106 (248)
T cd06432 29 SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELVTYKW--PRWLHKQTEKQRIIWGYKILFLDVLFPLNVDKVIFVDADQ 106 (248)
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEEEecC--hhhhhcccccchhHHHHHHHHHHHhhhhccCEEEEEcCCc
Confidence 5789999999999999999999988876544 344321 1112111 111235789999888775 589999999999
Q ss_pred cccCCchhhhcCCc----ccccCC-----------------------CCCcccceEEEEeCChhhHHHHHHHHhh-----
Q 037463 155 LVLKNIDEFFFYPE----FSAAGT-----------------------NKVLFNSGVMVIEPSLCKFEDLTLKSFK----- 202 (344)
Q Consensus 155 LVl~dIdeLF~l~~----iaAvpd-----------------------~~~yFNSGVmLinps~~~~~~l~~~~~~----- 202 (344)
||++||++||+++. +||+++ ...||||||||||+++||.+++.+.+.+
T Consensus 107 lv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l 186 (248)
T cd06432 107 IVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQL 186 (248)
T ss_pred eecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999972 455532 1249999999999999998887764332
Q ss_pred ---CCCCCCCChHHHHHHhh--cccccCcccccccccccCCchhhhcCCCcEEEEecC
Q 037463 203 ---VSSYNGGDQGFLNEVFT--WWHRLPKRINHLKVFSKQDDKEHQVGDGLYAIHYLG 255 (344)
Q Consensus 203 ---~~~~~~~DQdiLN~~f~--~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~IIHf~g 255 (344)
..++.++|||+||.++. +++.||.+||++..+-.. +..+.+.+|||..
T Consensus 187 ~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~~~~-----~~~~~~~~~~~~~ 239 (248)
T cd06432 187 SQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETWCSD-----ESKKKAKTIDLCN 239 (248)
T ss_pred hcCCCccccCCchhhHHHhccCCeEECChHHHHHHHHhcc-----cccCccceeeccc
Confidence 23477899999999997 499999999998765321 2367899999964
No 21
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.86 E-value=7.5e-22 Score=190.57 Aligned_cols=178 Identities=16% Similarity=0.164 Sum_probs=118.2
Q ss_pred cccEEEEEEcCCcchhhhh-hhhHHhhhcCCEE---EEEechhhHHHhhhccCCCcchhhhHhhhcccC-CcCEEEEEeC
Q 037463 78 DRAVYVVFVGSCGAMVEMF-RCDDLVEHAGDYR---VYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLI-EYDKIIFIDS 152 (344)
Q Consensus 78 ~~~~~v~~~s~c~p~~~~~-~~~~l~~~~~~~~---~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~-~ydKVLYLDa 152 (344)
..++++|++++.....++. .+++......... +|.++-+.-.. ..=+..++..+|+||++++++ ++||||||||
T Consensus 27 ~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~-~~ws~l~~~~~y~RL~ip~lLp~~dkvLYLD~ 105 (304)
T cd06430 27 QKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNA-AEWKKLFKPCAAQRLFLPSLLPDVDSLLYVDT 105 (304)
T ss_pred CCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccch-hhhhhcccHHHHHHHHHHHHhhhhceEEEecc
Confidence 4589999999874444444 4777755544433 34432111000 000122334789999999987 6899999999
Q ss_pred CccccCCchhhhcC--C----ccccc-CCC------------------CCcccceEEEEeCChhhH-----------HHH
Q 037463 153 DLLVLKNIDEFFFY--P----EFSAA-GTN------------------KVLFNSGVMVIEPSLCKF-----------EDL 196 (344)
Q Consensus 153 D~LVl~dIdeLF~l--~----~iaAv-pd~------------------~~yFNSGVmLinps~~~~-----------~~l 196 (344)
|+||++||++||++ + .++|+ |+. ..+|||||||||++.|+. .++
T Consensus 106 Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~ 185 (304)
T cd06430 106 DILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRW 185 (304)
T ss_pred ceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhH
Confidence 99999999999987 3 24443 321 135999999999999997 333
Q ss_pred HH----HHhhC-CCCCCCChHHHHHHhh-c---ccccCccccccccccc-CCchhhhcCCCcEEEEecCC
Q 037463 197 TL----KSFKV-SSYNGGDQGFLNEVFT-W---WHRLPKRINHLKVFSK-QDDKEHQVGDGLYAIHYLGL 256 (344)
Q Consensus 197 ~~----~~~~~-~~~~~~DQdiLN~~f~-~---~~~Lp~~yN~~~~~~~-~~~~~~~~~~~~~IIHf~g~ 256 (344)
.+ .+.+. ..+.++|||+||.+|. + +..||.+||++..... +..-.....+.++|||.++.
T Consensus 186 ~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~~~~~~~~~~~~~H~n~~ 255 (304)
T cd06430 186 EEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSNCKAAEEEGVFILHGNRG 255 (304)
T ss_pred HHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCccccCCccceeecccccccccccceEEEcCCC
Confidence 43 34333 3577899999999999 5 8899999998763211 11101112468999999863
No 22
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1e-18 Score=173.19 Aligned_cols=219 Identities=40% Similarity=0.627 Sum_probs=189.0
Q ss_pred hccCCCcchhhhHhhhcccCCcCEEEEEeCCccccCCchhhhc-CCcccccCCCCCcccceEEEEeCChhhHHHHHHHHh
Q 037463 123 KQKDSYNEWNYSKLRVWQLIEYDKIIFIDSDLLVLKNIDEFFF-YPEFSAAGTNKVLFNSGVMVIEPSLCKFEDLTLKSF 201 (344)
Q Consensus 123 ~~~~~ys~~ty~KL~i~~L~~ydKVLYLDaD~LVl~dIdeLF~-l~~iaAvpd~~~yFNSGVmLinps~~~~~~l~~~~~ 201 (344)
+..+.+..+.|.+++.+.++.+++.+.+|+|..++.+.+.+|. .+.+++++.....||+|.|++.|+.+.++.+++...
T Consensus 143 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~ 222 (369)
T KOG1950|consen 143 ANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGLLVFEPSLCNYKDLMEFSE 222 (369)
T ss_pred ccccccchhcccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCCccceeccCccccCCCccchhhHHHhhc
Confidence 4456677789999999999999999999999999999999999 788999988888899999999999999999999988
Q ss_pred hCCCCCCCChHHHHHHhhccc-ccCcccccccccccCCchh---h-hcCCCcEEEEecCC-CCCCCCCCCCCCccccccc
Q 037463 202 KVSSYNGGDQGFLNEVFTWWH-RLPKRINHLKVFSKQDDKE---H-QVGDGLYAIHYLGL-KPWMCYKDYDCNWDMVSRH 275 (344)
Q Consensus 202 ~~~~~~~~DQdiLN~~f~~~~-~Lp~~yN~~~~~~~~~~~~---~-~~~~~~~IIHf~g~-KPW~~~~~y~~nw~~~~~~ 275 (344)
...++.+++|+++|.+|..+. +.|+.+|+..+....++.. . ........+||.|. |||.++++++|||+....+
T Consensus 223 ~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~~~~~~y~~~~~p~~~~~~~~~n~~~~~~~ 302 (369)
T KOG1950|consen 223 EFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSRASSVLRYALHYLGANKPELCYRDFDCNLDGDEFP 302 (369)
T ss_pred ccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhhcccccchhhhccccCCCCccccCccccccccccc
Confidence 888999999999999999666 8899999988765544421 1 12234466799995 9999999999999765555
Q ss_pred ccCCchHHHHHHHHHhhhHHHHHHHhhcchHHHHHHHHHHHHHHHcCCCCCceeecccCCccccCC
Q 037463 276 KFASDSAHKKWWQVYDAMPKKLQQYCALTKYMDKRIKKWRRIAENASLANGHWKIKPKDPRQYHIV 341 (344)
Q Consensus 276 ~~~~d~~~~~WW~~~~~~p~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~ 341 (344)
..+.+..++.||.+|+.++..++.+|.++..+.....++++.+....++.++|++...+||...++
T Consensus 303 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (369)
T KOG1950|consen 303 RKDIDSLHKKWWDVYDDMSLDLKVHCKLWAKESTEYPLVRPQAELAAFPEEHDKIDYKAPRAFKAI 368 (369)
T ss_pred chhHHHHHhccchhhccCchhhhhccccccccccccchhhchhHHhhcccccccccccCchhhhcc
Confidence 556677899999999999999999999988778888888999999999999999999999988765
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.53 E-value=4.3e-15 Score=141.90 Aligned_cols=121 Identities=39% Similarity=0.600 Sum_probs=91.7
Q ss_pred hhhHhhhcccCCcCEEEEEeCCccccCCchhhhcCC--cccccC------------------------------------
Q 037463 132 NYSKLRVWQLIEYDKIIFIDSDLLVLKNIDEFFFYP--EFSAAG------------------------------------ 173 (344)
Q Consensus 132 ty~KL~i~~L~~ydKVLYLDaD~LVl~dIdeLF~l~--~iaAvp------------------------------------ 173 (344)
+|+||++|++++||||||||+|.||++|+|+||++| +++|.|
T Consensus 156 mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r~~ly~ 235 (368)
T COG5597 156 MFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMRAALYA 235 (368)
T ss_pred HhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccHhhhcc
Confidence 799999999999999999999999999999999987 333221
Q ss_pred ------------------CCCCcccceEEEEeCChhhHHHHHHHHh-hC-CCCCCCChHHHHHHhh-----cccccCccc
Q 037463 174 ------------------TNKVLFNSGVMVIEPSLCKFEDLTLKSF-KV-SSYNGGDQGFLNEVFT-----WWHRLPKRI 228 (344)
Q Consensus 174 ------------------d~~~yFNSGVmLinps~~~~~~l~~~~~-~~-~~~~~~DQdiLN~~f~-----~~~~Lp~~y 228 (344)
+-+.+||||+||++|+...+.+++.... +. ..-+.-.|.++|-.|+ -|.+++++|
T Consensus 236 Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~FPwerld~~y 315 (368)
T COG5597 236 PYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFFPWERLDPRY 315 (368)
T ss_pred ccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccCchhhcCccc
Confidence 1246899999999999999999887652 11 1223347999999887 478999999
Q ss_pred ccccccccCCchhhhcCCCcEEEEecCCCCCCCC
Q 037463 229 NHLKVFSKQDDKEHQVGDGLYAIHYLGLKPWMCY 262 (344)
Q Consensus 229 N~~~~~~~~~~~~~~~~~~~~IIHf~g~KPW~~~ 262 (344)
| +++.... ..+-.+.+|+ |||...
T Consensus 316 N---G~wa~~n----dlPylka~Hg---K~W~y~ 339 (368)
T COG5597 316 N---GYWADAN----DLPYLKAWHG---KPWFYT 339 (368)
T ss_pred c---ccccccc----ccchHHHhhc---CcCCCC
Confidence 9 4443221 1234456675 999974
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.58 E-value=0.0002 Score=65.13 Aligned_cols=124 Identities=22% Similarity=0.300 Sum_probs=73.1
Q ss_pred CcchhhhHhhhc-ccC--CcCEEEEEeCCccccCCchhhhcCCc--ccccCC---------CCCcccceEEEEeCChhhH
Q 037463 128 YNEWNYSKLRVW-QLI--EYDKIIFIDSDLLVLKNIDEFFFYPE--FSAAGT---------NKVLFNSGVMVIEPSLCKF 193 (344)
Q Consensus 128 ys~~ty~KL~i~-~L~--~ydKVLYLDaD~LVl~dIdeLF~l~~--iaAvpd---------~~~yFNSGVmLinps~~~~ 193 (344)
|...+..|+.+- .++ .| -|+|+|+|++.++|+.++|+.+. +....+ .+..+|+|+|.+.++....
T Consensus 48 ~~~~~~~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~ 126 (212)
T PF03407_consen 48 FQKLTWLKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTI 126 (212)
T ss_pred HHHHHHHHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHH
Confidence 333455666543 333 44 59999999999999999993221 221111 2345799999999998774
Q ss_pred ---HHHHHHHhhCCCCCCCChHHHHHHhh-c--------ccccCcccccc--cccccCCchhhhc--CCCcEEEEecC
Q 037463 194 ---EDLTLKSFKVSSYNGGDQGFLNEVFT-W--------WHRLPKRINHL--KVFSKQDDKEHQV--GDGLYAIHYLG 255 (344)
Q Consensus 194 ---~~l~~~~~~~~~~~~~DQdiLN~~f~-~--------~~~Lp~~yN~~--~~~~~~~~~~~~~--~~~~~IIHf~g 255 (344)
+.+.+.+.+. -...||.+||.++. . +..||...-.. ..|.. ....... ...|++||.++
T Consensus 127 ~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~-~~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 127 AFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQ-SRDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred HHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceee-cchhhhhccccccceEEEcC
Confidence 4444444332 23359999999987 3 34555432211 11111 1111112 35899999964
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.81 E-value=0.018 Score=58.28 Aligned_cols=119 Identities=20% Similarity=0.226 Sum_probs=72.3
Q ss_pred CCcCEEEEEeCCccccCCchhhhcCCc--cc-------------ccCCCCCcccceEEEEeCChhhHHHHHHH-------
Q 037463 142 IEYDKIIFIDSDLLVLKNIDEFFFYPE--FS-------------AAGTNKVLFNSGVMVIEPSLCKFEDLTLK------- 199 (344)
Q Consensus 142 ~~ydKVLYLDaD~LVl~dIdeLF~l~~--ia-------------Avpd~~~yFNSGVmLinps~~~~~~l~~~------- 199 (344)
.+++=+.|||+|+||+.. -|.+|. +. ....+-..+|+|+|+|...+|..+-|-..
T Consensus 196 PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~ 272 (429)
T PLN03182 196 PEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKG 272 (429)
T ss_pred CCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCC
Confidence 478999999999999862 344441 00 01224568999999999999875433221
Q ss_pred -------------HhhCCCCCCCChHHHHHHhh----cc---cccCcccccccccccCC----ch----hh---hcCCCc
Q 037463 200 -------------SFKVSSYNGGDQGFLNEVFT----WW---HRLPKRINHLKVFSKQD----DK----EH---QVGDGL 248 (344)
Q Consensus 200 -------------~~~~~~~~~~DQdiLN~~f~----~~---~~Lp~~yN~~~~~~~~~----~~----~~---~~~~~~ 248 (344)
+.....+...||..|-.++. +| ..|-..|-+. +|+..- ++ +. -...-|
T Consensus 273 ~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~-Gyw~~iv~~yee~~~~~~~g~gd~rwP 351 (429)
T PLN03182 273 PIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLH-GYWVGLVDRYEEMMEKYHPGLGDDRWP 351 (429)
T ss_pred chhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceec-cccHHHHHHHHHHHHhcCCCCCCcccc
Confidence 11112355679999999885 34 2455555432 232210 00 00 123468
Q ss_pred EEEEecCCCCCCCCCC
Q 037463 249 YAIHYLGLKPWMCYKD 264 (344)
Q Consensus 249 ~IIHf~g~KPW~~~~~ 264 (344)
.|.||+|.||-..+.+
T Consensus 352 fvtHF~GckpC~~~~~ 367 (429)
T PLN03182 352 FVTHFVGCKPCGGYGD 367 (429)
T ss_pred eeEeeccceecCCCCC
Confidence 9999999999766543
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=95.10 E-value=0.014 Score=65.62 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=81.1
Q ss_pred chhhhHhhhcccC--CcCEEEEEeCCccccCCchhhhcCCc----ccccC-----------------------CCCCccc
Q 037463 130 EWNYSKLRVWQLI--EYDKIIFIDSDLLVLKNIDEFFFYPE----FSAAG-----------------------TNKVLFN 180 (344)
Q Consensus 130 ~~ty~KL~i~~L~--~ydKVLYLDaD~LVl~dIdeLF~l~~----iaAvp-----------------------d~~~yFN 180 (344)
.|.|-=||+-=|. +.+||||+|||-||..||+||.+++. .+-+| ....|-=
T Consensus 1261 iWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYHI 1340 (1470)
T KOG1879|consen 1261 IWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYHI 1340 (1470)
T ss_pred hhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCcccc
Confidence 3555545554443 78999999999999999999998873 22222 1346788
Q ss_pred ceEEEEeCChhhHHHHHHHHh--------hCCCCCCCChHHHHHHhh--cccccCcccccccccccCCchhhhcCCCcEE
Q 037463 181 SGVMVIEPSLCKFEDLTLKSF--------KVSSYNGGDQGFLNEVFT--WWHRLPKRINHLKVFSKQDDKEHQVGDGLYA 250 (344)
Q Consensus 181 SGVmLinps~~~~~~l~~~~~--------~~~~~~~~DQdiLN~~f~--~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~I 250 (344)
|...|+++..-|.-.--+.++ ...+...-|||+=|.... .+..||..|=+.-++-.. +..+.+++
T Consensus 1341 SALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLWCETWC~d-----~skkkAkt 1415 (1470)
T KOG1879|consen 1341 SALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLWCETWCDD-----ESKKKAKT 1415 (1470)
T ss_pred ceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhhhhhhcCc-----hhhhhchh
Confidence 999999987655422222222 124566679999999887 899999986544333211 12345666
Q ss_pred EEecCCCCCCC
Q 037463 251 IHYLGLKPWMC 261 (344)
Q Consensus 251 IHf~g~KPW~~ 261 (344)
|--+. -||..
T Consensus 1416 IDLCn-NP~TK 1425 (1470)
T KOG1879|consen 1416 IDLCN-NPLTK 1425 (1470)
T ss_pred hhhhc-Ccccc
Confidence 65443 35554
No 27
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.62 E-value=0.017 Score=54.55 Aligned_cols=122 Identities=16% Similarity=0.188 Sum_probs=17.0
Q ss_pred hhhHhhhcc--c---CCcCEEEEEeCCccccCCchhhhcC-------Ccc----------cc----------------cC
Q 037463 132 NYSKLRVWQ--L---IEYDKIIFIDSDLLVLKNIDEFFFY-------PEF----------SA----------------AG 173 (344)
Q Consensus 132 ty~KL~i~~--L---~~ydKVLYLDaD~LVl~dIdeLF~l-------~~i----------aA----------------vp 173 (344)
++.|+.+-+ + .+++=|+|||+|+||...=-.|.+. +.. .. ..
T Consensus 60 ~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t 139 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIIT 139 (239)
T ss_dssp HHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 457775442 2 3679999999999998754333211 100 00 01
Q ss_pred CCCCcccceEEEEeCChhhHHHHHHHHhh----CCCC---CCCChHHHHHHhh-------cccccCc-ccccccccccCC
Q 037463 174 TNKVLFNSGVMVIEPSLCKFEDLTLKSFK----VSSY---NGGDQGFLNEVFT-------WWHRLPK-RINHLKVFSKQD 238 (344)
Q Consensus 174 d~~~yFNSGVmLinps~~~~~~l~~~~~~----~~~~---~~~DQdiLN~~f~-------~~~~Lp~-~yN~~~~~~~~~ 238 (344)
.+...+|+|+|++..+.|... +++...+ .... ..+||..|-.+++ +...+|. ..|.... +.
T Consensus 140 ~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~---~~ 215 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPE---DE 215 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc
Confidence 245789999999999999853 4444332 1122 3679999998887 2334553 2333221 11
Q ss_pred chhhhcCCCcEEEEecCCCC
Q 037463 239 DKEHQVGDGLYAIHYLGLKP 258 (344)
Q Consensus 239 ~~~~~~~~~~~IIHf~g~KP 258 (344)
.. ....+...|+||.|-++
T Consensus 216 ~~-~~~~~GDfvvhfaGC~~ 234 (239)
T PF05637_consen 216 CN-YQYKEGDFVVHFAGCKV 234 (239)
T ss_dssp --------------------
T ss_pred cc-ccccccccccccccccc
Confidence 11 22345668999999543
No 28
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=93.61 E-value=0.087 Score=52.93 Aligned_cols=78 Identities=14% Similarity=0.248 Sum_probs=51.9
Q ss_pred EEEeCCccccCCchhhhcCCcccccCCCCCcccceEEEEeCChhhHHH-HHHHHhhCC--CCCCCChHHHHHHhhccccc
Q 037463 148 IFIDSDLLVLKNIDEFFFYPEFSAAGTNKVLFNSGVMVIEPSLCKFED-LTLKSFKVS--SYNGGDQGFLNEVFTWWHRL 224 (344)
Q Consensus 148 LYLDaD~LVl~dIdeLF~l~~iaAvpd~~~yFNSGVmLinps~~~~~~-l~~~~~~~~--~~~~~DQdiLN~~f~~~~~L 224 (344)
||||+|+||++|+..|=+.=...++.....+.|.+||.++..-.--.. |-+.....+ .+..+-.+++..++++|...
T Consensus 242 vYLDTDvIvLksl~~l~N~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c~~ 321 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNVIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWCNT 321 (409)
T ss_pred EEeeccEEEecccccccccccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHhCC
Confidence 899999999999999876422233334567899999999997654333 334444332 22234677888888855444
Q ss_pred C
Q 037463 225 P 225 (344)
Q Consensus 225 p 225 (344)
+
T Consensus 322 ~ 322 (409)
T KOG1928|consen 322 K 322 (409)
T ss_pred C
Confidence 3
No 29
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=93.00 E-value=0.087 Score=50.46 Aligned_cols=49 Identities=14% Similarity=0.354 Sum_probs=37.6
Q ss_pred hHhhhcccCCcCEEEEEeCCccccCCchhhhcCCcccccCCCCCcccceEEEE-eCChh
Q 037463 134 SKLRVWQLIEYDKIIFIDSDLLVLKNIDEFFFYPEFSAAGTNKVLFNSGVMVI-EPSLC 191 (344)
Q Consensus 134 ~KL~i~~L~~ydKVLYLDaD~LVl~dIdeLF~l~~iaAvpd~~~yFNSGVmLi-nps~~ 191 (344)
.|.++--...++.||+||||.+.+.|++.||+.+ .|-.+|.++. +|+.|
T Consensus 81 ~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~---------~yk~tG~lfw~dpd~~ 130 (271)
T PF11051_consen 81 NKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE---------EYKKTGALFWRDPDFW 130 (271)
T ss_pred hhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc---------cccccCEEEECCCccc
Confidence 4555555568999999999999999999999865 5667777766 34443
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=80.47 E-value=5.8 Score=40.74 Aligned_cols=96 Identities=20% Similarity=0.174 Sum_probs=58.0
Q ss_pred hhhHhhhcc-----cCCcCEEEEEeCCccccCCchhhhcCC-----ccc----ccC------CCCCcccceEEEEeCChh
Q 037463 132 NYSKLRVWQ-----LIEYDKIIFIDSDLLVLKNIDEFFFYP-----EFS----AAG------TNKVLFNSGVMVIEPSLC 191 (344)
Q Consensus 132 ty~KL~i~~-----L~~ydKVLYLDaD~LVl~dIdeLF~l~-----~ia----Avp------d~~~yFNSGVmLinps~~ 191 (344)
.++|+-+-+ ..+++-+-|||+|+||... -|.++ ... .-| .+-..+|+|+++|..++|
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp---~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqW 258 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM---DFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQW 258 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHH
Confidence 346665443 3478999999999999865 22222 110 111 345789999999999998
Q ss_pred hHHHHHHH----------------H----hhCCCCCCCChHHHHHHhh----ccc---ccCccccc
Q 037463 192 KFEDLTLK----------------S----FKVSSYNGGDQGFLNEVFT----WWH---RLPKRINH 230 (344)
Q Consensus 192 ~~~~l~~~----------------~----~~~~~~~~~DQdiLN~~f~----~~~---~Lp~~yN~ 230 (344)
-..-|-.. + .....+...||..|-.++- +|. .|-..|-+
T Consensus 259 Sl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~ 324 (453)
T PLN03181 259 SLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYF 324 (453)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceee
Confidence 64333111 1 1112234469999998775 342 45555544
No 31
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=77.78 E-value=3.7 Score=39.74 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=64.1
Q ss_pred ccCCCcchhhhHhhhc-----ccC--CcCEEEEEeCCccccCCch-hhhcCCcc------------------------cc
Q 037463 124 QKDSYNEWNYSKLRVW-----QLI--EYDKIIFIDSDLLVLKNID-EFFFYPEF------------------------SA 171 (344)
Q Consensus 124 ~~~~ys~~ty~KL~i~-----~L~--~ydKVLYLDaD~LVl~dId-eLF~l~~i------------------------aA 171 (344)
+...|...+.-|+.+. +.. ++|-+.++|+|+++.+++. |.+. +.+ |-
T Consensus 97 ~~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg-~lva~lHp~~y~~~~~~fpYERrp~S~Ay 175 (271)
T cd02515 97 EESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLG-DSVAQLHPWWYGKPRKQFPYERRPSSAAY 175 (271)
T ss_pred cccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhh-hhheecChhhhcCCCCCCCCcCCCCcccc
Confidence 3456666677887766 333 8899999999999999885 3322 111 11
Q ss_pred cCC--CCCcccceEEEEeCChhhHHHHHHHHhh------CCCC--CCCChHHHHHHhh---cccccCcccccccc
Q 037463 172 AGT--NKVLFNSGVMVIEPSLCKFEDLTLKSFK------VSSY--NGGDQGFLNEVFT---WWHRLPKRINHLKV 233 (344)
Q Consensus 172 vpd--~~~yFNSGVmLinps~~~~~~l~~~~~~------~~~~--~~~DQdiLN~~f~---~~~~Lp~~yN~~~~ 233 (344)
+|. ...|+-+|+.== +...+-+|.+.+.+ ...+ ...|..-||.+|- ..+.|++.|+.-..
T Consensus 176 Ip~~eGdfYy~Ga~~GG--~~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e~ 248 (271)
T cd02515 176 IPEGEGDFYYHGAVFGG--SVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDDR 248 (271)
T ss_pred ccCCCCCeEEeeeecCc--cHHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCcc
Confidence 221 233444444311 12233344433321 1122 4689999999987 37899999988653
No 32
>PRK15384 type III secretion system protein; Provisional
Probab=72.01 E-value=2.9 Score=40.02 Aligned_cols=47 Identities=9% Similarity=0.355 Sum_probs=36.1
Q ss_pred cCEEEEEeCCccccCCchhhhcCCccccc---CCCCCcccceEEEEeCCh
Q 037463 144 YDKIIFIDSDLLVLKNIDEFFFYPEFSAA---GTNKVLFNSGVMVIEPSL 190 (344)
Q Consensus 144 ydKVLYLDaD~LVl~dIdeLF~l~~iaAv---pd~~~yFNSGVmLinps~ 190 (344)
-.-+||||+|||+.+-|.-|+.-+.+|.- .++....-.|.+++|.+.
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 46899999999999999999987776632 234456667888888764
No 33
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=71.21 E-value=3.2 Score=39.76 Aligned_cols=47 Identities=13% Similarity=0.365 Sum_probs=36.3
Q ss_pred cCEEEEEeCCccccCCchhhhcCCccccc---CCCCCcccceEEEEeCCh
Q 037463 144 YDKIIFIDSDLLVLKNIDEFFFYPEFSAA---GTNKVLFNSGVMVIEPSL 190 (344)
Q Consensus 144 ydKVLYLDaD~LVl~dIdeLF~l~~iaAv---pd~~~yFNSGVmLinps~ 190 (344)
-+-+||||+|||+.+-|.-|+.-+.+|.- .++....--|.+++|.+.
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 46899999999999999999987776632 234456667888888764
No 34
>PRK15383 type III secretion system protein; Provisional
Probab=70.71 E-value=3.3 Score=39.70 Aligned_cols=47 Identities=17% Similarity=0.398 Sum_probs=36.1
Q ss_pred cCEEEEEeCCccccCCchhhhcCCccccc---CCCCCcccceEEEEeCCh
Q 037463 144 YDKIIFIDSDLLVLKNIDEFFFYPEFSAA---GTNKVLFNSGVMVIEPSL 190 (344)
Q Consensus 144 ydKVLYLDaD~LVl~dIdeLF~l~~iaAv---pd~~~yFNSGVmLinps~ 190 (344)
-.-+||||+|||+.+-|.-|+.-+.+|.- .++....--|.+++|.+.
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 46799999999999999999987776632 234456667888888764
No 35
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=64.38 E-value=3.8 Score=33.15 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=22.1
Q ss_pred hhhhHhhhcccCCcCEEEEEeCCccccCCc-hhhhc
Q 037463 131 WNYSKLRVWQLIEYDKIIFIDSDLLVLKNI-DEFFF 165 (344)
Q Consensus 131 ~ty~KL~i~~L~~ydKVLYLDaD~LVl~dI-deLF~ 165 (344)
+.+.|+.+--.. ==||+|.|+++++++ +.+..
T Consensus 66 sD~~R~~~L~~~---GGiY~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 66 SDLLRYLVLYKY---GGIYLDLDVICLRPLDDPWLP 98 (103)
T ss_pred HHHHHHHHHHHc---CcEEEeCccccCcchhhhhhc
Confidence 355666553222 229999999999999 77654
No 36
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=48.05 E-value=44 Score=31.47 Aligned_cols=77 Identities=23% Similarity=0.324 Sum_probs=49.3
Q ss_pred CCcCEEEEEeCCccccCC---chhhhcCCcccccC-C--CCCcccceEEEEeCChhhHHHHHHHHh---h-CCCCCCCCh
Q 037463 142 IEYDKIIFIDSDLLVLKN---IDEFFFYPEFSAAG-T--NKVLFNSGVMVIEPSLCKFEDLTLKSF---K-VSSYNGGDQ 211 (344)
Q Consensus 142 ~~ydKVLYLDaD~LVl~d---IdeLF~l~~iaAvp-d--~~~yFNSGVmLinps~~~~~~l~~~~~---~-~~~~~~~DQ 211 (344)
.+++=||+||+||.|+.+ |.+..+ +.+.-+- + ...-+.||--++..+.+.-+-|.+.+. + ..++.|.|-
T Consensus 40 ~~~~~vlflDaDigVvNp~~~iEefid-~~~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDN 118 (222)
T PF03314_consen 40 PEYDWVLFLDADIGVVNPNRRIEEFID-EGYDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTDN 118 (222)
T ss_pred ccCCEEEEEcCCceeecCcccHHHhcC-CCCcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCcc
Confidence 478999999999999876 344332 1111110 0 113356777788888877665555543 1 246778999
Q ss_pred HHHHHHhh
Q 037463 212 GFLNEVFT 219 (344)
Q Consensus 212 diLN~~f~ 219 (344)
|.|-.++.
T Consensus 119 GAlH~~L~ 126 (222)
T PF03314_consen 119 GALHIFLA 126 (222)
T ss_pred HHHHHHHH
Confidence 99998876
No 37
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=38.02 E-value=89 Score=31.66 Aligned_cols=111 Identities=15% Similarity=0.142 Sum_probs=65.7
Q ss_pred CCcCEEEEEeCCccccCCchhhhcC----------------Cccccc----------------------CCCCCcccceE
Q 037463 142 IEYDKIIFIDSDLLVLKNIDEFFFY----------------PEFSAA----------------------GTNKVLFNSGV 183 (344)
Q Consensus 142 ~~ydKVLYLDaD~LVl~dIdeLF~l----------------~~iaAv----------------------pd~~~yFNSGV 183 (344)
.+.+=|=+||.|.|+...--+|=+. +.+.+. |.+...+|+|=
T Consensus 174 P~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~naGS 253 (364)
T KOG4748|consen 174 PDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINAGS 253 (364)
T ss_pred CCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCccccc
Confidence 3778999999999998643222110 111111 23456799999
Q ss_pred EEEeCChhh---HHHHHHHHhhCCCCCCCChHHHHHHhh-------cccccCccc-ccccccccCCchhhhcCCCcEEEE
Q 037463 184 MVIEPSLCK---FEDLTLKSFKVSSYNGGDQGFLNEVFT-------WWHRLPKRI-NHLKVFSKQDDKEHQVGDGLYAIH 252 (344)
Q Consensus 184 mLinps~~~---~~~l~~~~~~~~~~~~~DQdiLN~~f~-------~~~~Lp~~y-N~~~~~~~~~~~~~~~~~~~~IIH 252 (344)
+||..+.+. ++-+-+-+.........+|++|-.++. .|..||.+| |.. ..+++. ....+...++|
T Consensus 254 fLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~---~~~~~~-~g~~egdlvvh 329 (364)
T KOG4748|consen 254 FLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSY---PNGAPG-YGYEEGDLVVH 329 (364)
T ss_pred eEEecCccchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcC---CCCCCC-CccccCCeEEE
Confidence 999988753 222222222222334578999988876 356777664 432 222222 12246788999
Q ss_pred ecCC
Q 037463 253 YLGL 256 (344)
Q Consensus 253 f~g~ 256 (344)
|.|-
T Consensus 330 FaGC 333 (364)
T KOG4748|consen 330 FAGC 333 (364)
T ss_pred eccc
Confidence 9996
No 38
>TIGR03513 GldL_gliding gliding motility-associated protein GldL. This protein family, GldL, is named for the member from Flavobacterium johnsoniae, which is required for a type of rapid gliding motility found in certain members of the Bacteriodetes. However, members are found also in several members of the Bacteriodetes that appear not to be motile
Probab=26.62 E-value=41 Score=31.32 Aligned_cols=22 Identities=23% Similarity=0.765 Sum_probs=18.5
Q ss_pred eeccCCCCCccCccCccccccCC
Q 037463 9 RFDHVGEDKKWEDFFPEWIDEDH 31 (344)
Q Consensus 9 ~~~~~~~~~~w~~~~p~~ide~~ 31 (344)
-||++.+..+|+..||| .++.+
T Consensus 48 AFe~p~~e~dW~~vyPE-L~~~~ 69 (202)
T TIGR03513 48 AFEKPADEYDWERVYPE-LASKN 69 (202)
T ss_pred ccCCCccccchhhhccc-ccCCC
Confidence 37999999999999998 65553
No 39
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.42 E-value=1e+02 Score=33.16 Aligned_cols=117 Identities=12% Similarity=0.121 Sum_probs=55.3
Q ss_pred CCCCCCCCCCC-CCCCcceEEEeeccCCcccch-hhhcCccCCCCcccEEEEEEcCCcchhhhhh----hhHHhhhcC--
Q 037463 35 PPTCPDIPMPT-QDYRYLDVIVARVPCRGDGDA-AVESGWVKPDVDRAVYVVFVGSCGAMVEMFR----CDDLVEHAG-- 106 (344)
Q Consensus 35 ~~~cp~~p~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~----~~~l~~~~~-- 106 (344)
...-|+-|+|. ....=+==|-+.=||+-+|.| |...|+..-+..+..-+.++|++....--.. --++..+.+
T Consensus 132 ~~~~p~~p~p~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~ 211 (736)
T COG2943 132 LSIAPNEPLPDLHRTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGE 211 (736)
T ss_pred CCCCCCCCCCcccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCC
Confidence 34678888888 332111111112233322332 2222222212222455777887553221111 123333332
Q ss_pred CEEEEEechhhHHHhhhccCCCcchhhhHhhhcccCCcCEEEEEeCCccccCC
Q 037463 107 DYRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLIEYDKIIFIDSDLLVLKN 159 (344)
Q Consensus 107 ~~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~~ydKVLYLDaD~LVl~d 159 (344)
+...|++.+++. ..++.|...|.|=+= -.|+..|.||+|.+..++
T Consensus 212 ~~ifYRrRr~n~-----~RKaGNIaDfcrRwG---~~Y~~MlVLDADSvMtgd 256 (736)
T COG2943 212 GNIFYRRRRRNV-----KRKAGNIADFCRRWG---SAYSYMLVLDADSVMTGD 256 (736)
T ss_pred CceeeehHhhhh-----cccccCHHHHHHHhC---cccceEEEeecccccCch
Confidence 334566432222 234445555555332 269999999999999887
No 40
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=22.69 E-value=1.1e+02 Score=30.64 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=53.2
Q ss_pred CCcchhhhHhhhcc------c-CCcCEEEEEeCCccccCCchh-hhcCCcc------------------------cccCC
Q 037463 127 SYNEWNYSKLRVWQ------L-IEYDKIIFIDSDLLVLKNIDE-FFFYPEF------------------------SAAGT 174 (344)
Q Consensus 127 ~ys~~ty~KL~i~~------L-~~ydKVLYLDaD~LVl~dIde-LF~l~~i------------------------aAvpd 174 (344)
.+...+..|+.+.. + -++|-+..+|+|+++.+++.. ... +.+ |-+|.
T Consensus 165 ~Wqd~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg-~lva~LHp~~y~~~~~~FpYERrp~S~AyIp~ 243 (337)
T PF03414_consen 165 RWQDISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILG-DLVATLHPWFYFKPRESFPYERRPKSQAYIPY 243 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-S-SEEEEESTTTTTSTGGGS--B-STTSTTB--T
T ss_pred CCccchhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHH-HHHHHhCHHHHCCChhhCccccCccccccccC
Confidence 33444666665443 1 278999999999999988753 221 111 11222
Q ss_pred --CCCcccceEEEEeCChhhHHHHHHH--------HhhCCCCCCCChHHHHHHhh---cccccCccccccccc
Q 037463 175 --NKVLFNSGVMVIEPSLCKFEDLTLK--------SFKVSSYNGGDQGFLNEVFT---WWHRLPKRINHLKVF 234 (344)
Q Consensus 175 --~~~yFNSGVmLinps~~~~~~l~~~--------~~~~~~~~~~DQdiLN~~f~---~~~~Lp~~yN~~~~~ 234 (344)
...|+-+|++==.+ ..+-+|++. ..+.-.-...|..-||.+|- ..+.|++.|+.-..+
T Consensus 244 ~eGDfYY~ga~fGGt~--~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~KPtKvLSPEY~Wd~~~ 314 (337)
T PF03414_consen 244 GEGDFYYHGAFFGGTV--EEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYHKPTKVLSPEYCWDERF 314 (337)
T ss_dssp T--S--EECCEEEECH--HHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS--SEEE-GGGSBSHHH
T ss_pred CCCCeEEeceecCCcH--HHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhCCCceecCHHHccCccC
Confidence 23456666553222 222233322 22222345689999999885 577899999986544
Done!