Query 037463
Match_columns 344
No_of_seqs 310 out of 1316
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 21:41:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 4.7E-34 1.6E-38 269.7 12.5 224 64-292 19-256 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 7.3E-33 2.5E-37 269.2 12.2 220 64-293 18-256 (333)
3 3tzt_A Glycosyl transferase fa 100.0 8.9E-33 3E-37 261.7 8.7 214 64-293 19-271 (276)
4 1g9r_A Glycosyl transferase; a 100.0 1.4E-29 4.9E-34 242.5 11.0 198 64-262 14-255 (311)
5 2p6w_A VP54, putative glycosyl 81.1 2.6 9E-05 37.7 6.0 108 142-255 71-198 (213)
6 1o7q_A N-acetyllactosaminide a 64.9 4.9 0.00017 37.9 3.8 107 128-234 116-264 (289)
7 3ioh_A Histo-blood group ABO s 52.2 14 0.00048 34.9 4.6 106 127-232 124-271 (298)
8 4ayl_A BOGT-metal-independent 50.7 17 0.00059 33.4 4.9 105 127-234 65-218 (246)
9 3bcv_A Putative glycosyltransf 13.3 3.9E+02 0.013 22.0 6.4 67 80-159 34-100 (240)
10 4hg6_A Cellulose synthase subu 10.1 5.4E+02 0.018 26.8 7.4 20 140-159 235-254 (802)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=4.7e-34 Score=269.66 Aligned_cols=224 Identities=26% Similarity=0.352 Sum_probs=159.5
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCEEEE--EechhhHHHhhhccCCCcchhhhHhhhccc
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYRVY--WVHAKLLLLLLKQKDSYNEWNYSKLRVWQL 141 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~~y--~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L 141 (344)
+.+++..|++.++...++ |+++|...|......++++ +...+- .+...+-.-+...++..-..+|+||++|++
T Consensus 19 ga~vL~~SL~~~~s~~~l-vvLvt~~vs~~~~~~L~~~----~~~vi~V~~l~~~~~~~~~~~~rp~~~~~~~kl~~~~l 93 (263)
T 3u2u_A 19 GALVLGSSLKQHRTTRRL-VVLATPQVSDSMRKVLETV----FDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSL 93 (263)
T ss_dssp HHHHHHHHHHHTTCCSEE-EEEECTTSCHHHHHHHHHH----SSEEEECCCCCCCCHHHHHHTTCTTGGGGGGGGGGGGC
T ss_pred HHHHHHHHHHHhCCCCCE-EEEecCCCCHHHHHHHHHc----CCeEEEeeecCCcchhhhhhhcCcchhHHhHHHHhccc
Confidence 778888899888777777 5578887776555444433 332211 111111111111111122468999999999
Q ss_pred CCcCEEEEEeCCccccCCchhhhcCCcccccCCCC--CcccceEEEEeCChhhHHHHHHHHhhCCCCCCCChHHHHHHhh
Q 037463 142 IEYDKIIFIDSDLLVLKNIDEFFFYPEFSAAGTNK--VLFNSGVMVIEPSLCKFEDLTLKSFKVSSYNGGDQGFLNEVFT 219 (344)
Q Consensus 142 ~~ydKVLYLDaD~LVl~dIdeLF~l~~iaAvpd~~--~yFNSGVmLinps~~~~~~l~~~~~~~~~~~~~DQdiLN~~f~ 219 (344)
++||||||||||++|++||++||+++.++|+|+.+ .|||||||||||+...++++++.+.+..++.++|||+||.+|.
T Consensus 94 ~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~ 173 (263)
T 3u2u_A 94 TQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFS 173 (263)
T ss_dssp TTCSEEEEECTTEEECSCCGGGGGSCSSEEEECTTSTTSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTT
T ss_pred cCcceEEEEcCCEeeccCHHHHhCCCcceEeccCCCCccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhc
Confidence 99999999999999999999999999999999864 7999999999999999999999988777889999999999997
Q ss_pred c------ccccCcccccccccccC-CchhhhcCCCcEEEEecC-CCCCCCCCCCCCCccccc-cccc-CCchHHHHHHHH
Q 037463 220 W------WHRLPKRINHLKVFSKQ-DDKEHQVGDGLYAIHYLG-LKPWMCYKDYDCNWDMVS-RHKF-ASDSAHKKWWQV 289 (344)
Q Consensus 220 ~------~~~Lp~~yN~~~~~~~~-~~~~~~~~~~~~IIHf~g-~KPW~~~~~y~~nw~~~~-~~~~-~~d~~~~~WW~~ 289 (344)
. +..||.+||++...... .+.+.+..++++||||+| .|||....+....--... ..+. .-..+-++||.+
T Consensus 174 ~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~~ 253 (263)
T 3u2u_A 174 SWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGASAKVVHFLGRVKPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNI 253 (263)
T ss_dssp TTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGGGCSEEECCSSSCGGGSEEETTTTEEECCSSCGGGSSTHHHHHHHHH
T ss_pred cccccCeeEeCCcccccccchhccccHHHHhhcCCeEEEEECCCCcCCCCCCCCCCCcccccCCCcchhHHHHHHHHHHH
Confidence 4 47999999998753222 223334467899999999 799997421100000000 0011 015788999999
Q ss_pred Hhh
Q 037463 290 YDA 292 (344)
Q Consensus 290 ~~~ 292 (344)
|.+
T Consensus 254 ~~~ 256 (263)
T 3u2u_A 254 FTT 256 (263)
T ss_dssp HHH
T ss_pred HHh
Confidence 985
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.98 E-value=7.3e-33 Score=269.16 Aligned_cols=220 Identities=28% Similarity=0.401 Sum_probs=156.5
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCEEEEEec---hh---hHHHhhhccCCCcchhhhHhh
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYRVYWVH---AK---LLLLLLKQKDSYNEWNYSKLR 137 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~~y~~~---~~---dl~~l~~~~~~ys~~ty~KL~ 137 (344)
+.+|+..|++..+...++.| ++++..+......+.++ +... ..+. .. .+..+ .+.....+|+||+
T Consensus 18 ~a~vl~~SL~~~~s~~~l~v-lv~~~is~~~~~~L~~~----~~~v-~~v~~l~~~~~~~~~~~---~~~~~~~t~~Kl~ 88 (333)
T 1ll2_A 18 GALVLGSSLKQHRTSRRLAV-LTTPQVSDTMRKALEIV----FDEV-ITVDILDSGDSAHLTLM---KRPELGVTLTKLH 88 (333)
T ss_dssp HHHHHHHHHHHTTCCSEEEE-EECTTSCHHHHHHHHHH----CSEE-EECCTTSTTSTTHHHHH---HCGGGHHHHHHGG
T ss_pred HHHHHHHHHHHhCCCCCEEE-EEcCCCCHHHHHHHHHh----CCEE-EEEeecCCcchhhcccc---cccchHHHHHHHH
Confidence 66777788887777777755 67776665544444333 3222 2211 11 11111 1223457999999
Q ss_pred hcccCCcCEEEEEeCCccccCCchhhhcCCcccccCCC--CCcccceEEEEeCChhhHHHHHHHHhhCCCCCCCChHHHH
Q 037463 138 VWQLIEYDKIIFIDSDLLVLKNIDEFFFYPEFSAAGTN--KVLFNSGVMVIEPSLCKFEDLTLKSFKVSSYNGGDQGFLN 215 (344)
Q Consensus 138 i~~L~~ydKVLYLDaD~LVl~dIdeLF~l~~iaAvpd~--~~yFNSGVmLinps~~~~~~l~~~~~~~~~~~~~DQdiLN 215 (344)
+|+|++|+||||||||+||++||++||+++.++|+|+. ..|||||||||||+...++++++.+.+..++.++||++||
T Consensus 89 i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~~~~~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN 168 (333)
T 1ll2_A 89 CWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLN 168 (333)
T ss_dssp GGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSSSTTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHH
T ss_pred HhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecCCCCcceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999885 3699999999999999999999998877788899999999
Q ss_pred HHhhcc------cccCcccccccccccC-CchhhhcCCCcEEEEecC-CCCCCCCCCC--CCCc-ccccccccCCchHHH
Q 037463 216 EVFTWW------HRLPKRINHLKVFSKQ-DDKEHQVGDGLYAIHYLG-LKPWMCYKDY--DCNW-DMVSRHKFASDSAHK 284 (344)
Q Consensus 216 ~~f~~~------~~Lp~~yN~~~~~~~~-~~~~~~~~~~~~IIHf~g-~KPW~~~~~y--~~nw-~~~~~~~~~~d~~~~ 284 (344)
.+|..| ..||.+||++...... .+.+.....+++||||+| .|||...... ..-+ ..++.+. ..+.+++
T Consensus 169 ~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 247 (333)
T 1ll2_A 169 TFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTM-THPQFLN 247 (333)
T ss_dssp HHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGGGCSEEECCSSCCGGGSCEETTTTEEC---------CCHHHHH
T ss_pred HHHHhhcccCccccCCcHHhcccccchhccHHHHhhcCCCEEEEECCCCCCCCCCCCCCccccccccccccc-cHHHHHH
Confidence 999955 7999999998753211 122223457899999999 7999874211 0000 0000110 0146789
Q ss_pred HHHHHHhhh
Q 037463 285 KWWQVYDAM 293 (344)
Q Consensus 285 ~WW~~~~~~ 293 (344)
+||++|+++
T Consensus 248 ~WW~~~~~~ 256 (333)
T 1ll2_A 248 VWWDIFTTS 256 (333)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999965
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.97 E-value=8.9e-33 Score=261.66 Aligned_cols=214 Identities=16% Similarity=0.140 Sum_probs=147.5
Q ss_pred cchhhhcCccCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCCEE-EEEechhhHHHhhhccCCCcchhhhHhhhcccC
Q 037463 64 GDAAVESGWVKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGDYR-VYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLI 142 (344)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~-~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~ 142 (344)
+..|+-.|+..+.....+.++++++..+......+.++....|-.. ++.++...+.- ....++++.++|+||++++++
T Consensus 19 ~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~s~~~~~rl~~~~l~ 97 (276)
T 3tzt_A 19 QMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSF-AKVTDRYPKEMYYRLLAGEFL 97 (276)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC--------------CHHHHHHHTHHHHS
T ss_pred HHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhc-CccccccCHHHHHHHHHHHHc
Confidence 4444455555544445788999999998888888888887776443 45543222222 123467899999999999997
Q ss_pred --CcCEEEEEeCCccccCCchhhhcCC----cccccCCC-----------------CCcccceEEEEeCChhhHHHH---
Q 037463 143 --EYDKIIFIDSDLLVLKNIDEFFFYP----EFSAAGTN-----------------KVLFNSGVMVIEPSLCKFEDL--- 196 (344)
Q Consensus 143 --~ydKVLYLDaD~LVl~dIdeLF~l~----~iaAvpd~-----------------~~yFNSGVmLinps~~~~~~l--- 196 (344)
+++||||||+|+||++||++||+++ .+||+++. ..||||||||||++.|+.+++
T Consensus 98 p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV~linl~~~R~~~~~~~ 177 (276)
T 3tzt_A 98 PENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGLLLINLKRAREEIDPDE 177 (276)
T ss_dssp CTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEEEEEEHHHHHHHCCHHH
T ss_pred ccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeEEEEEHHHHHhhhHHHH
Confidence 5999999999999999999999987 47777642 279999999999999987544
Q ss_pred -HHHHhhC-CCCCCCChHHHHHHhh-cccccCc-cccccccccc-------CCchhhhcCCCcEEEEecC-CCCCCCCCC
Q 037463 197 -TLKSFKV-SSYNGGDQGFLNEVFT-WWHRLPK-RINHLKVFSK-------QDDKEHQVGDGLYAIHYLG-LKPWMCYKD 264 (344)
Q Consensus 197 -~~~~~~~-~~~~~~DQdiLN~~f~-~~~~Lp~-~yN~~~~~~~-------~~~~~~~~~~~~~IIHf~g-~KPW~~~~~ 264 (344)
++.+.+. .++.++|||+||.+|. +|+.||. +||++.++.. +.....+..++++||||+| .|||...
T Consensus 178 ~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~-- 255 (276)
T 3tzt_A 178 IFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKN-- 255 (276)
T ss_dssp HHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTT--
T ss_pred HHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchhhhccccchhhhhhhccCCeEEEECCCCCCcCCC--
Confidence 4444443 3567899999999999 9999998 9999975431 1111222446799999999 6999863
Q ss_pred CCCCcccccccccCCchHHHHHHHHHhhh
Q 037463 265 YDCNWDMVSRHKFASDSAHKKWWQVYDAM 293 (344)
Q Consensus 265 y~~nw~~~~~~~~~~d~~~~~WW~~~~~~ 293 (344)
+.+ .+++.||+|++..
T Consensus 256 --------~~~-----~~~~~w~~Y~~~~ 271 (276)
T 3tzt_A 256 --------HRN-----KFTSLYKHYMSLT 271 (276)
T ss_dssp --------CCS-----TTHHHHHHHHHHH
T ss_pred --------CCC-----chHHHHHHHHHHH
Confidence 233 3488999999854
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.96 E-value=1.4e-29 Score=242.54 Aligned_cols=198 Identities=16% Similarity=0.152 Sum_probs=145.0
Q ss_pred cchhhhcCc-cCCCCcccEEEEEEcCCcchhhhhhhhHHhhhcCC-EEEEEechhhHHHhhhccCCCcchhhhHhhhccc
Q 037463 64 GDAAVESGW-VKPDVDRAVYVVFVGSCGAMVEMFRCDDLVEHAGD-YRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQL 141 (344)
Q Consensus 64 ~~~~~~~~~-~~~~~~~~~~v~~~s~c~p~~~~~~~~~l~~~~~~-~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L 141 (344)
+.+|+..|+ ..+ ....+.++++++..+......++++....|- +-++.++..++.-.....++++.++|+||++|++
T Consensus 14 ~~~vli~Sl~l~~-~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~l 92 (311)
T 1g9r_A 14 YLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEY 92 (311)
T ss_dssp HHHHHHHHHHHTC-TTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHH
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHH
Confidence 445666666 332 3457788889998888877778887776543 4455544333322111246778899999999997
Q ss_pred C-CcCEEEEEeCCccccCCchhhhcCC----cccccCC-----------------CCCcccceEEEEeCChhhH----HH
Q 037463 142 I-EYDKIIFIDSDLLVLKNIDEFFFYP----EFSAAGT-----------------NKVLFNSGVMVIEPSLCKF----ED 195 (344)
Q Consensus 142 ~-~ydKVLYLDaD~LVl~dIdeLF~l~----~iaAvpd-----------------~~~yFNSGVmLinps~~~~----~~ 195 (344)
+ +++||||||||+||++||++||+++ .+||+++ ...||||||||+|++.|+. ++
T Consensus 93 l~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~linl~~~r~~~~~~~ 172 (311)
T 1g9r_A 93 IADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKM 172 (311)
T ss_dssp CCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCHHHH
T ss_pred hhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeeeeeeHHHHHhcchHHH
Confidence 5 8999999999999999999999986 3666653 2469999999999999875 44
Q ss_pred HHHHHhhC-CCCCCCChHHHHHHhh-cccccCccccccccccc------CCc-------hhhhcCCCcEEEEecC-CCCC
Q 037463 196 LTLKSFKV-SSYNGGDQGFLNEVFT-WWHRLPKRINHLKVFSK------QDD-------KEHQVGDGLYAIHYLG-LKPW 259 (344)
Q Consensus 196 l~~~~~~~-~~~~~~DQdiLN~~f~-~~~~Lp~~yN~~~~~~~------~~~-------~~~~~~~~~~IIHf~g-~KPW 259 (344)
+++.+.+. .++.++||++||.+|. +|..||.+||++..... +.. .......+++||||+| .|||
T Consensus 173 ~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW 252 (311)
T 1g9r_A 173 SSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPW 252 (311)
T ss_dssp HHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTT
T ss_pred HHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcccccchhhhhHHhhccCCCEEEEeCCcCCCC
Confidence 55555443 4578899999999999 99999999999874321 001 1123456889999999 6999
Q ss_pred CCC
Q 037463 260 MCY 262 (344)
Q Consensus 260 ~~~ 262 (344)
...
T Consensus 253 ~~~ 255 (311)
T 1g9r_A 253 HRD 255 (311)
T ss_dssp SSS
T ss_pred CCC
Confidence 864
No 5
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=81.12 E-value=2.6 Score=37.72 Aligned_cols=108 Identities=15% Similarity=0.152 Sum_probs=57.7
Q ss_pred CCcCEEEEEeCCccccC-----CchhhhcCCccccc-------CCCCCcccceEEEEeCChhhHHHHHHHHhhCC---CC
Q 037463 142 IEYDKIIFIDSDLLVLK-----NIDEFFFYPEFSAA-------GTNKVLFNSGVMVIEPSLCKFEDLTLKSFKVS---SY 206 (344)
Q Consensus 142 ~~ydKVLYLDaD~LVl~-----dIdeLF~l~~iaAv-------pd~~~yFNSGVmLinps~~~~~~l~~~~~~~~---~~ 206 (344)
.+.+=+-|||+|++|.. .|..-.++..--.+ +-.....|+||+||..+....+++.=.+.-.. .+
T Consensus 71 PeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~ 150 (213)
T 2p6w_A 71 PSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF 150 (213)
T ss_dssp TTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST
T ss_pred CCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccccccccccccceeeeecccchhhhhceeehhhhhcccCC
Confidence 48899999999999982 22221111111111 11123679999999988776666543332222 22
Q ss_pred CCCChHHHHHHhhc-----ccccCcccccccccccCCchhhhcCCCcEEEEecC
Q 037463 207 NGGDQGFLNEVFTW-----WHRLPKRINHLKVFSKQDDKEHQVGDGLYAIHYLG 255 (344)
Q Consensus 207 ~~~DQdiLN~~f~~-----~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~IIHf~g 255 (344)
.+....+...+|.+ +..-|...|+...-. .+-.+++..+|.+|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 198 (213)
T 2p6w_A 151 PYEQKTVYEYVFPRIPGRYIVHDPYTLNCIVKAY------PEHVKDALFVHMCG 198 (213)
T ss_dssp TTHHHHHHHTHHHHSTTSEEEECCTTTSEETTTC------TTTGGGCSEEECTT
T ss_pred CcccceeeeeeccCCCcceEecCcceeeeehhhc------hhhhhhhhhhhhcc
Confidence 23333444555541 223344555554221 11235677899887
No 6
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=64.85 E-value=4.9 Score=37.92 Aligned_cols=107 Identities=10% Similarity=0.072 Sum_probs=62.1
Q ss_pred CcchhhhHhhhcc------c-CCcCEEEEEeCCccccCCchhh-----hcC--C---------------c--ccccCC--
Q 037463 128 YNEWNYSKLRVWQ------L-IEYDKIIFIDSDLLVLKNIDEF-----FFY--P---------------E--FSAAGT-- 174 (344)
Q Consensus 128 ys~~ty~KL~i~~------L-~~ydKVLYLDaD~LVl~dIdeL-----F~l--~---------------~--iaAvpd-- 174 (344)
+...++.|+.+.. + -++|-+.++|+|+++.+++..= +.. + . -|-+|.
T Consensus 116 W~d~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E~Lg~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp~~e 195 (289)
T 1o7q_A 116 WQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETLGESVAQLQAWWYKADPNDFTYERRKESAAYIPFGE 195 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGGGCSSEEEEECTTTTTSCGGGSCCCCCTTSTTCCCTTC
T ss_pred CchhHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHHHHHHHHHccCHHHhCCCCCCCCCCCCcCceeeecCCC
Confidence 4444666665432 2 2789999999999999987441 111 0 0 111232
Q ss_pred CCCcccceEEEEeCChh------hHHHHHHHHhhCCCCCCCChHHHHHHhh---cccccCccccccccc
Q 037463 175 NKVLFNSGVMVIEPSLC------KFEDLTLKSFKVSSYNGGDQGFLNEVFT---WWHRLPKRINHLKVF 234 (344)
Q Consensus 175 ~~~yFNSGVmLinps~~------~~~~l~~~~~~~~~~~~~DQdiLN~~f~---~~~~Lp~~yN~~~~~ 234 (344)
...|+-+|+.==.+..- -.+.+++-..+.-.-...|..-||.+|- ..+.|++.|+....+
T Consensus 196 GdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd~~~ 264 (289)
T 1o7q_A 196 GDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWDYHI 264 (289)
T ss_dssp CSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCGGG
T ss_pred CCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCCccc
Confidence 34566666653333211 1122222222222345789999999864 567899999987765
No 7
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=52.19 E-value=14 Score=34.91 Aligned_cols=106 Identities=9% Similarity=0.082 Sum_probs=60.2
Q ss_pred CCcchhhhHhhhcc------c-CCcCEEEEEeCCccccCCch-----hhhcC--C---------------c--ccccCC-
Q 037463 127 SYNEWNYSKLRVWQ------L-IEYDKIIFIDSDLLVLKNID-----EFFFY--P---------------E--FSAAGT- 174 (344)
Q Consensus 127 ~ys~~ty~KL~i~~------L-~~ydKVLYLDaD~LVl~dId-----eLF~l--~---------------~--iaAvpd- 174 (344)
.|...+..|+.+.. + -++|-+..+|+|+++.+++. +|+.. + . -|.+|.
T Consensus 124 ~Wqd~sm~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~Lg~lva~lHp~~y~~~~~~FpYERrp~S~AyIp~~ 203 (298)
T 3ioh_A 124 RWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIPKD 203 (298)
T ss_dssp SHHHHHHHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGCSSEEEEBCTTTTTSCGGGSCCCCCTTSTTCCCTT
T ss_pred CCccccHHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccCccHHHhHhhHhhcChhhhcCCcccCcccCCccccccccCC
Confidence 33334666665543 1 26899999999999999764 22222 1 0 112232
Q ss_pred -CCCcccceEEEEeCCh------hhHHHHHHHHhhCCCCCCCChHHHHHHhh---cccccCccccccc
Q 037463 175 -NKVLFNSGVMVIEPSL------CKFEDLTLKSFKVSSYNGGDQGFLNEVFT---WWHRLPKRINHLK 232 (344)
Q Consensus 175 -~~~yFNSGVmLinps~------~~~~~l~~~~~~~~~~~~~DQdiLN~~f~---~~~~Lp~~yN~~~ 232 (344)
...|+-+|++==.+.. .-.+.+++-..+.-.-...|..-||.+|- ..+.|++.|+.-.
T Consensus 204 eGdfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~hKPtKvLSPEY~Wd~ 271 (298)
T 3ioh_A 204 EGDFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRHKPTKVLSPEYLWDQ 271 (298)
T ss_dssp CCSCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBCH
T ss_pred CCCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhcCCCceeCHHHcCCc
Confidence 2356666655322221 11122222222223345789999999986 4678999998754
No 8
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=50.73 E-value=17 Score=33.40 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=57.2
Q ss_pred CCcchhhhHhhhcc-----cC-CcCEEEEEeCCccccCCchh-hhcCC-----ccc------------------------
Q 037463 127 SYNEWNYSKLRVWQ-----LI-EYDKIIFIDSDLLVLKNIDE-FFFYP-----EFS------------------------ 170 (344)
Q Consensus 127 ~ys~~ty~KL~i~~-----L~-~ydKVLYLDaD~LVl~dIde-LF~l~-----~ia------------------------ 170 (344)
.|...+..|+.+.. +. +.|-+..+|+|+++.+++.. .. +| .+|
T Consensus 65 ~Wqd~sm~Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG~E~L-~p~~~~~lva~lHp~~y~~~~~~fpYERrp~S~A 143 (246)
T 4ayl_A 65 GWPDNTLKRFHIFLRIKEQLERETDYLFFFNANLLFTSPIGKEIL-PPSDSNGLLGTMHPGFYNKPNSEFTYERRDASTA 143 (246)
T ss_dssp CTTHHHHTHHHHHHTTHHHHHHHCSEEEEECTTEEECSCBCGGGS-CCTTSCCEEEEBCGGGC-----------------
T ss_pred CCcccchHHHHHHHHHHHHHHhhCCEEEEEeCCceeeccCCHHHc-ccCCCCCEEEEechhhhCCCcccCcccCCccccc
Confidence 34444555554432 22 58999999999999998753 22 11 011
Q ss_pred ccCC--CCCcccceEEEEeCChhhHHHHHHH--------HhhCCCCCCCChHHHHHHhh--ccc-ccCccccccccc
Q 037463 171 AAGT--NKVLFNSGVMVIEPSLCKFEDLTLK--------SFKVSSYNGGDQGFLNEVFT--WWH-RLPKRINHLKVF 234 (344)
Q Consensus 171 Avpd--~~~yFNSGVmLinps~~~~~~l~~~--------~~~~~~~~~~DQdiLN~~f~--~~~-~Lp~~yN~~~~~ 234 (344)
.+|. ..-|+-+|+.==.+ ..+-+|++. ..+.-.-...|..-||.+|- +-. .|++.|+.-..+
T Consensus 144 yIp~~eGdfYY~ga~fGG~~--~~vl~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd~~~ 218 (246)
T 4ayl_A 144 YIPEGEGRYYYAGGLSGGCT--KAYLKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYPEGW 218 (246)
T ss_dssp -------CCCBCSSEEEEEH--HHHHHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEETTC
T ss_pred cccCCCCCeEEeeeecCCcH--HHHHHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCCccc
Confidence 1121 23455555553222 122233322 22222345789999999986 444 499999876543
No 9
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=13.26 E-value=3.9e+02 Score=22.02 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=40.2
Q ss_pred cEEEEEEcCCcchhhhhhhhHHhhhcCCEEEEEechhhHHHhhhccCCCcchhhhHhhhcccCCcCEEEEEeCCccccCC
Q 037463 80 AVYVVFVGSCGAMVEMFRCDDLVEHAGDYRVYWVHAKLLLLLLKQKDSYNEWNYSKLRVWQLIEYDKIIFIDSDLLVLKN 159 (344)
Q Consensus 80 ~~~v~~~s~c~p~~~~~~~~~l~~~~~~~~~y~~~~~dl~~l~~~~~~ys~~ty~KL~i~~L~~ydKVLYLDaD~LVl~d 159 (344)
...|+++-++.+......++++..+..++-++.. ++.. .+..+=...+....+-|++||+|.++..+
T Consensus 34 ~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~----------~n~G---~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~ 100 (240)
T 3bcv_A 34 DIEIILIDDESPDNCPKICDDYAAQYPNIKVIHK----------KNAG---LGMACNSGLDVATGEYVAFCDSDDYVDSD 100 (240)
T ss_dssp SEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEEC----------CCCC---HHHHHHHHHHHCCSSEEEECCTTCCCCTT
T ss_pred CeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEEC----------CCCC---hHHHHHHHHHHcCCCEEEEECCCCcCCHH
Confidence 5678888876666555556666666555544431 1111 11233333344567899999999998665
No 10
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=10.14 E-value=5.4e+02 Score=26.83 Aligned_cols=20 Identities=10% Similarity=0.315 Sum_probs=16.6
Q ss_pred ccCCcCEEEEEeCCccccCC
Q 037463 140 QLIEYDKIIFIDSDLLVLKN 159 (344)
Q Consensus 140 ~L~~ydKVLYLDaD~LVl~d 159 (344)
+..+.|-|+++|+|+++..+
T Consensus 235 ~~a~gd~Il~lDaD~~~~pd 254 (802)
T 4hg6_A 235 ERLKGELVVVFDADHVPSRD 254 (802)
T ss_dssp HHCCCSEEEECCTTEEECTT
T ss_pred HhcCCCEEEEECCCCCcChH
Confidence 33578999999999999765
Done!