Query 037469
Match_columns 429
No_of_seqs 283 out of 608
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 21:47:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnl_A Shikimate dehydrogenase 79.3 9.2 0.00031 37.4 10.0 93 263-362 180-282 (315)
2 3t4e_A Quinate/shikimate dehyd 76.0 12 0.00041 36.5 9.7 93 263-362 174-276 (312)
3 4b4u_A Bifunctional protein fo 74.7 13 0.00043 36.4 9.3 70 261-337 179-250 (303)
4 1b0a_A Protein (fold bifunctio 69.9 15 0.00052 35.6 8.6 72 260-338 158-231 (288)
5 3czx_A Putative N-acetylmuramo 65.9 7.2 0.00025 34.9 5.1 45 280-324 36-84 (182)
6 4a5o_A Bifunctional protein fo 65.6 11 0.00037 36.6 6.5 71 261-338 161-233 (286)
7 3ngx_A Bifunctional protein fo 65.2 10 0.00035 36.6 6.3 70 262-338 151-222 (276)
8 1a4i_A Methylenetetrahydrofola 60.7 7.9 0.00027 37.8 4.6 72 260-338 164-237 (301)
9 4a26_A Putative C-1-tetrahydro 60.4 14 0.00048 36.0 6.3 73 261-338 165-239 (300)
10 3p2o_A Bifunctional protein fo 59.9 13 0.00045 36.0 6.0 71 261-338 160-232 (285)
11 3l07_A Bifunctional protein fo 58.6 14 0.0005 35.7 6.0 71 261-338 161-233 (285)
12 3don_A Shikimate dehydrogenase 58.5 24 0.00082 33.7 7.6 78 280-362 131-229 (277)
13 1edz_A 5,10-methylenetetrahydr 49.1 16 0.00055 35.9 4.7 74 260-337 176-274 (320)
14 1jwq_A N-acetylmuramoyl-L-alan 48.1 23 0.00078 31.5 5.2 45 280-324 36-86 (179)
15 3jyo_A Quinate/shikimate dehyd 47.6 13 0.00045 35.5 3.8 87 263-362 153-248 (283)
16 3fni_A Putative diflavin flavo 47.4 20 0.00068 30.9 4.6 62 260-323 5-72 (159)
17 2yxb_A Coenzyme B12-dependent 45.4 35 0.0012 29.6 5.9 52 259-310 16-67 (161)
18 1i1q_B Anthranilate synthase c 44.1 19 0.00064 31.8 4.0 52 262-317 1-55 (192)
19 2c2x_A Methylenetetrahydrofola 42.2 18 0.00063 34.9 3.8 73 260-338 157-232 (281)
20 3ne8_A N-acetylmuramoyl-L-alan 40.7 34 0.0012 31.8 5.3 45 280-324 38-88 (234)
21 2egg_A AROE, shikimate 5-dehyd 39.4 86 0.0029 29.8 8.2 57 302-363 196-260 (297)
22 2amj_A Modulator of drug activ 38.6 42 0.0014 30.0 5.5 38 279-316 37-76 (204)
23 3hly_A Flavodoxin-like domain; 38.6 32 0.0011 29.4 4.5 51 263-315 4-56 (161)
24 2fzv_A Putative arsenical resi 37.9 55 0.0019 31.3 6.4 55 260-316 57-129 (279)
25 3qay_A Endolysin; amidase A/B 37.3 47 0.0016 29.4 5.5 43 280-322 37-89 (180)
26 3h11_A CAsp8 and FADD-like apo 36.4 46 0.0016 31.7 5.6 65 260-331 42-118 (272)
27 3u7q_A Nitrogenase molybdenum- 35.5 23 0.00078 36.7 3.5 97 259-360 218-318 (492)
28 3ezx_A MMCP 1, monomethylamine 35.4 44 0.0015 30.5 5.1 59 259-317 90-149 (215)
29 1z0s_A Probable inorganic poly 34.2 90 0.0031 29.8 7.3 54 260-323 28-81 (278)
30 2pjk_A 178AA long hypothetical 33.6 94 0.0032 27.4 6.9 66 259-324 13-95 (178)
31 3rpe_A MDAB, modulator of drug 32.9 48 0.0016 30.5 5.0 38 279-316 50-89 (218)
32 3pwz_A Shikimate dehydrogenase 32.6 98 0.0033 29.2 7.2 48 309-361 180-233 (272)
33 1ccw_A Protein (glutamate muta 31.8 51 0.0018 27.6 4.6 54 261-314 3-58 (137)
34 1l9x_A Gamma-glutamyl hydrolas 31.7 65 0.0022 31.0 5.9 61 259-319 28-95 (315)
35 3l4e_A Uncharacterized peptida 31.5 80 0.0027 28.5 6.2 62 261-322 27-91 (206)
36 1xmp_A PURE, phosphoribosylami 31.4 78 0.0027 28.3 5.8 78 259-337 9-95 (170)
37 1mkz_A Molybdenum cofactor bio 31.3 1.1E+02 0.0036 26.8 6.8 66 259-324 8-83 (172)
38 2h54_A Caspase-1; allosteric s 31.0 58 0.002 29.0 5.0 28 277-305 66-93 (178)
39 3lp6_A Phosphoribosylaminoimid 30.8 93 0.0032 27.8 6.2 60 259-319 5-71 (174)
40 3fbt_A Chorismate mutase and s 30.7 1.4E+02 0.0048 28.3 8.0 89 262-362 123-233 (282)
41 2q62_A ARSH; alpha/beta, flavo 30.5 1.1E+02 0.0038 28.3 7.1 56 260-316 33-104 (247)
42 3pdi_B Nitrogenase MOFE cofact 30.4 18 0.00063 37.0 1.8 98 259-361 167-288 (458)
43 4dio_A NAD(P) transhydrogenase 30.1 78 0.0027 32.0 6.3 56 280-335 204-309 (405)
44 3aek_B Light-independent proto 29.9 19 0.00064 37.6 1.8 100 260-362 152-257 (525)
45 2zuv_A Lacto-N-biose phosphory 29.6 13 0.00045 40.3 0.5 124 261-397 438-603 (759)
46 3pzy_A MOG; ssgcid, seattle st 29.3 73 0.0025 27.7 5.3 67 259-325 5-81 (164)
47 2fi0_A Conserved domain protei 29.2 36 0.0012 26.2 2.9 21 273-293 58-78 (81)
48 3ors_A N5-carboxyaminoimidazol 28.0 1.2E+02 0.0041 26.8 6.4 59 260-319 2-67 (163)
49 3qhp_A Type 1 capsular polysac 27.8 1.3E+02 0.0045 24.4 6.6 50 261-317 32-81 (166)
50 3p2y_A Alanine dehydrogenase/p 27.5 82 0.0028 31.5 5.9 40 303-342 258-307 (381)
51 2rir_A Dipicolinate synthase, 27.1 1.3E+02 0.0045 28.2 7.1 54 304-363 209-265 (300)
52 4grd_A N5-CAIR mutase, phospho 26.9 1.4E+02 0.0047 26.8 6.6 60 259-319 10-76 (173)
53 1psw_A ADP-heptose LPS heptosy 26.4 2.3E+02 0.0078 26.4 8.8 66 273-340 195-289 (348)
54 3rfq_A Pterin-4-alpha-carbinol 26.3 1.4E+02 0.0048 26.6 6.7 69 259-328 28-107 (185)
55 1y80_A Predicted cobalamin bin 26.0 1.6E+02 0.0056 26.0 7.3 59 259-318 86-146 (210)
56 2d5c_A AROE, shikimate 5-dehyd 24.9 1.5E+02 0.0052 27.0 7.0 90 263-363 118-226 (263)
57 2ohh_A Type A flavoprotein FPR 24.7 80 0.0027 30.5 5.2 53 261-315 258-312 (404)
58 3kbq_A Protein TA0487; structu 24.2 1.6E+02 0.0054 26.0 6.6 68 262-329 4-81 (172)
59 2pl3_A Probable ATP-dependent 24.2 1.2E+02 0.004 26.8 5.9 61 260-324 96-160 (236)
60 1mio_A Nitrogenase molybdenum 24.2 31 0.0011 36.1 2.1 96 260-360 205-304 (533)
61 3iwt_A 178AA long hypothetical 24.0 92 0.0032 27.0 5.0 48 277-324 41-95 (178)
62 2eez_A Alanine dehydrogenase; 23.4 1.8E+02 0.006 28.3 7.5 91 272-369 13-119 (369)
63 2fz5_A Flavodoxin; alpha/beta 23.3 78 0.0027 25.3 4.2 53 264-322 4-61 (137)
64 3o8q_A Shikimate 5-dehydrogena 22.5 84 0.0029 29.8 4.7 48 309-361 186-239 (281)
65 1xov_A PLY protein, plypsa; al 22.4 55 0.0019 32.1 3.5 42 280-321 45-94 (326)
66 4b4k_A N5-carboxyaminoimidazol 21.9 93 0.0032 28.0 4.5 60 259-319 20-86 (181)
67 3rht_A (gatase1)-like protein; 21.9 43 0.0015 31.7 2.5 70 261-338 4-86 (259)
68 1y5e_A Molybdenum cofactor bio 21.4 2.2E+02 0.0076 24.5 7.0 65 260-324 12-86 (169)
69 3tov_A Glycosyl transferase fa 21.2 83 0.0029 30.3 4.5 78 260-339 184-288 (349)
70 3jtm_A Formate dehydrogenase, 20.9 99 0.0034 30.4 5.0 64 276-339 27-94 (351)
71 3fdx_A Putative filament prote 20.5 1.1E+02 0.0038 24.3 4.5 27 300-326 94-123 (143)
No 1
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=79.32 E-value=9.2 Score=37.38 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=62.6
Q ss_pred eEEEEecCCCccccCHHHHHHHHHhc-CCEEEEeeCCCCHHHHHHHhccCcEEEEechhhhhh---------hcccCCCc
Q 037469 263 RLLIVSRKRTRAFTNAEEIAQMGRRL-GFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMTN---------MIFLPENA 332 (429)
Q Consensus 263 rlliisR~~~R~i~Ne~ev~~~l~~~-Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAGLTN---------~lFl~pga 332 (429)
++++++|+.. .....+++.+.+.+. |.++.+.+. .+.++....+..+|++|..-.+||.. .-+++++.
T Consensus 180 ~V~i~nR~~~-~~~~a~~la~~~~~~~~~~~~~~~~-~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~ 257 (315)
T 3tnl_A 180 EISIFNRKDD-FYANAEKTVEKINSKTDCKAQLFDI-EDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPEL 257 (315)
T ss_dssp EEEEEECSST-THHHHHHHHHHHHHHSSCEEEEEET-TCHHHHHHHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTC
T ss_pred EEEEEECCCc-hHHHHHHHHHHhhhhcCCceEEecc-chHHHHHhhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCC
Confidence 7788888732 233455666666543 666665554 23555556677899999888888752 12468899
Q ss_pred EEEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 333 VFIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 333 ~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
+|++++-.- ..+.|-..|+..|.+.
T Consensus 258 ~V~DlvY~P-----~~T~ll~~A~~~G~~~ 282 (315)
T 3tnl_A 258 IVSDVVYKP-----TKTRLLEIAEEQGCQT 282 (315)
T ss_dssp EEEESCCSS-----SSCHHHHHHHHTTCEE
T ss_pred EEEEeccCC-----CCCHHHHHHHHCCCeE
Confidence 999987422 2567888899999864
No 2
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=75.96 E-value=12 Score=36.47 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=61.4
Q ss_pred eEEEEecCCCccccCHHHHHHHHHhc-CCEEEEeeCCCCHHHHHHHhccCcEEEEechhhhh---h------hcccCCCc
Q 037469 263 RLLIVSRKRTRAFTNAEEIAQMGRRL-GFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMT---N------MIFLPENA 332 (429)
Q Consensus 263 rlliisR~~~R~i~Ne~ev~~~l~~~-Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAGLT---N------~lFl~pga 332 (429)
++++.+|+..| ....+++.+.+.+. |.++...+. .++++....+..+|++|..-.+||. . .-+++++.
T Consensus 174 ~v~v~nRt~~~-~~~a~~la~~~~~~~~~~v~~~~~-~~l~~~~~~l~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~ 251 (312)
T 3t4e_A 174 EIKLFNRKDDF-FEKAVAFAKRVNENTDCVVTVTDL-ADQHAFTEALASADILTNGTKVGMKPLENESLIGDVSLLRPEL 251 (312)
T ss_dssp EEEEEECSSTH-HHHHHHHHHHHHHHSSCEEEEEET-TCHHHHHHHHHHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTC
T ss_pred EEEEEECCCch-HHHHHHHHHHhhhccCcceEEech-HhhhhhHhhccCceEEEECCcCCCCCCCCCcccCCHHHcCCCC
Confidence 67888887432 33445666655543 666665554 3443344556789999999999872 1 12467889
Q ss_pred EEEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 333 VFIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 333 ~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
+|++++-.- ..+.|-..|+..|.+.
T Consensus 252 ~v~D~vY~P-----~~T~ll~~A~~~G~~~ 276 (312)
T 3t4e_A 252 LVTECVYNP-----HMTKLLQQAQQAGCKT 276 (312)
T ss_dssp EEEECCCSS-----SSCHHHHHHHHTTCEE
T ss_pred EEEEeccCC-----CCCHHHHHHHHCCCeE
Confidence 999987432 2567888899999764
No 3
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=74.73 E-value=13 Score=36.41 Aligned_cols=70 Identities=19% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEech-hhhhhhcccCCCcEEEEE
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHG-AAMTNMIFLPENAVFIQV 337 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHG-AGLTN~lFl~pga~vIEi 337 (429)
.-++++|.|.. +--.-+..+|.+.|-.|.+... +.++++. .++|||+|+.=| +++-..=|.+||++||.+
T Consensus 179 Gk~vvViGRS~----iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~---~~~ADIvV~A~G~p~~i~~d~vk~GavVIDV 250 (303)
T 4b4u_A 179 GKHAVVVGRSA----ILGKPMAMMLLQANATVTICHSRTQNLPEL---VKQADIIVGAVGKAELIQKDWIKQGAVVVDA 250 (303)
T ss_dssp TCEEEEECCCT----TTHHHHHHHHHHTTCEEEEECTTCSSHHHH---HHTCSEEEECSCSTTCBCGGGSCTTCEEEEC
T ss_pred CCEEEEEeccc----cccchHHHHHHhcCCEEEEecCCCCCHHHH---hhcCCeEEeccCCCCccccccccCCCEEEEe
Confidence 34678888774 2223455667778999988776 4567665 458999998765 556566689999999986
No 4
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=69.93 E-value=15 Score=35.56 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=50.7
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQV 337 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi 337 (429)
..-++++|.|.+. + -.-+...|...|..|.+... +.++++ .++.|||+|+.=|+. +-..=|++||++||-+
T Consensus 158 ~gk~vvVIG~s~i---V-G~p~A~lL~~~gAtVtv~hs~t~~L~~---~~~~ADIVI~Avg~p~lI~~~~vk~GavVIDV 230 (288)
T 1b0a_A 158 FGLNAVVIGASNI---V-GRPMSMELLLAGCTTTVTHRFTKNLRH---HVENADLLIVAVGKPGFIPGDWIKEGAIVIDV 230 (288)
T ss_dssp TTCEEEEECCCTT---T-HHHHHHHHHTTTCEEEEECSSCSCHHH---HHHHCSEEEECSCCTTCBCTTTSCTTCEEEEC
T ss_pred CCCEEEEECCChH---H-HHHHHHHHHHCCCeEEEEeCCchhHHH---HhccCCEEEECCCCcCcCCHHHcCCCcEEEEc
Confidence 3457888988741 1 12356667778999998875 334554 456899999998876 5555567999999998
Q ss_pred e
Q 037469 338 V 338 (429)
Q Consensus 338 ~ 338 (429)
-
T Consensus 231 g 231 (288)
T 1b0a_A 231 G 231 (288)
T ss_dssp C
T ss_pred c
Confidence 4
No 5
>3czx_A Putative N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI, MCSG, protein structure initiative; 1.60A {Neisseria meningitidis MC58}
Probab=65.89 E-value=7.2 Score=34.95 Aligned_cols=45 Identities=24% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHhc-CCEEEEeeC---CCCHHHHHHHhccCcEEEEechhhhhh
Q 037469 280 EIAQMGRRL-GFNVVVAEA---NGNLSRFAETVNYCDVFLAVHGAAMTN 324 (429)
Q Consensus 280 ev~~~l~~~-Gf~V~v~e~---~~~~~q~~~l~~sadVlVGvHGAGLTN 324 (429)
+|.+.|++. |++|+.... ..++.+=..+.|.||++|++|--+..|
T Consensus 36 ~l~~~L~~~~G~~V~~tR~~d~~~~L~~R~~~an~adlfISIH~Na~~~ 84 (182)
T 3czx_A 36 IVASILRNDYGLTVKTDGTGKGNMPLRDAVKLIRGSDVAIEFHTNAAAN 84 (182)
T ss_dssp HHHHHHHHHHCCCEEESCSSCCCCCHHHHHHHHHTCSEEEEECCBCCSS
T ss_pred HHHHHHhhcCCcEEEEecCCCccCCHHHHHHHhhCCCEEEEeccCCCCC
Confidence 466677788 999987665 257877777778999999999776554
No 6
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=65.62 E-value=11 Score=36.62 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=51.9
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEEe
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQVV 338 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi~ 338 (429)
.-++++|.|.+. + -.-+..+|...|.+|.+..- +.++++. ++.|||+|+.-|+. +-..=|++||++||.+-
T Consensus 161 Gk~vvVvGrs~i---V-G~plA~lL~~~gAtVtv~hs~T~~L~~~---~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvg 233 (286)
T 4a5o_A 161 GMDAVVVGASNI---V-GRPMALELLLGGCTVTVTHRFTRDLADH---VSRADLVVVAAGKPGLVKGEWIKEGAIVIDVG 233 (286)
T ss_dssp TCEEEEECTTST---T-HHHHHHHHHHTTCEEEEECTTCSCHHHH---HHTCSEEEECCCCTTCBCGGGSCTTCEEEECC
T ss_pred CCEEEEECCCch---h-HHHHHHHHHHCCCeEEEEeCCCcCHHHH---hccCCEEEECCCCCCCCCHHHcCCCeEEEEec
Confidence 347888988741 1 13466677788999998875 3456654 56899999998875 66666789999999984
No 7
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=65.21 E-value=10 Score=36.56 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=51.2
Q ss_pred CeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEEe
Q 037469 262 PRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQVV 338 (429)
Q Consensus 262 prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi~ 338 (429)
-++++|.|.+. =-.-+...|.+.|.+|.+..- ..++++. ++.|||+|+.-|+. +-..=|++||++||-+-
T Consensus 151 k~vvVvG~s~i----VG~plA~lL~~~gAtVtv~~~~t~~L~~~---~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvg 222 (276)
T 3ngx_A 151 NTVTIVNRSPV----VGRPLSMMLLNRNYTVSVCHSKTKDIGSM---TRSSKIVVVAVGRPGFLNREMVTPGSVVIDVG 222 (276)
T ss_dssp CEEEEECCCTT----THHHHHHHHHHTTCEEEEECTTCSCHHHH---HHHSSEEEECSSCTTCBCGGGCCTTCEEEECC
T ss_pred CEEEEEcCChH----HHHHHHHHHHHCCCeEEEEeCCcccHHHh---hccCCEEEECCCCCccccHhhccCCcEEEEec
Confidence 47788888741 113466677788999998875 3456654 56899999998874 55666789999999883
No 8
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=60.69 E-value=7.9 Score=37.83 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=50.9
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQV 337 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi 337 (429)
..-++++|.|.+. + -.-+...|...|..|.+... ..+++ ..++.|||+|+.-|.. +-..=|++||++||-+
T Consensus 164 ~gk~vvVIG~s~i---V-G~p~A~lL~~~gAtVtv~hs~t~~L~---~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDV 236 (301)
T 1a4i_A 164 AGRHAVVVGRSKI---V-GAPMHDLLLWNNATVTTCHSKTAHLD---EEVNKGDILVVATGQPEMVKGEWIKPGAIVIDC 236 (301)
T ss_dssp TTCEEEEECCCTT---T-HHHHHHHHHHTTCEEEEECTTCSSHH---HHHTTCSEEEECCCCTTCBCGGGSCTTCEEEEC
T ss_pred CCCEEEEECCCch---H-HHHHHHHHHhCCCeEEEEECCcccHH---HHhccCCEEEECCCCcccCCHHHcCCCcEEEEc
Confidence 3457888988741 1 12356667778999988864 23454 4567999999998875 5555567999999988
Q ss_pred e
Q 037469 338 V 338 (429)
Q Consensus 338 ~ 338 (429)
-
T Consensus 237 g 237 (301)
T 1a4i_A 237 G 237 (301)
T ss_dssp C
T ss_pred c
Confidence 3
No 9
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=60.35 E-value=14 Score=36.02 Aligned_cols=73 Identities=14% Similarity=0.243 Sum_probs=51.1
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEEe
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQVV 338 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi~ 338 (429)
.-++++|.|.+. . -.-+...|.+.|.+|.+..- +.+++ ....+++|||+|+.=|.. +-..=|++||++||.+-
T Consensus 165 Gk~vvVIG~s~i---V-G~p~A~lL~~~gAtVtv~~~~T~~l~-l~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvg 239 (300)
T 4a26_A 165 GKRAVVLGRSNI---V-GAPVAALLMKENATVTIVHSGTSTED-MIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVG 239 (300)
T ss_dssp TCEEEEECCCTT---T-HHHHHHHHHHTTCEEEEECTTSCHHH-HHHHHHTCSEEEECSCCTTCBCGGGSCTTCEEEECC
T ss_pred CCEEEEECCCch---H-HHHHHHHHHHCCCeEEEEeCCCCCch-hhhhhccCCEEEECCCCCCCCcHHhcCCCcEEEEEe
Confidence 447788888741 0 13456677788999988874 23344 114567999999988875 55566789999999984
No 10
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=59.91 E-value=13 Score=35.98 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=51.3
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEEe
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQVV 338 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi~ 338 (429)
.-++++|.|.+. + -.-+..+|.+.|.+|.+..- ..++++ .++.|||+|+.-|+. +-..=|++||++||.+-
T Consensus 160 Gk~vvVvGrs~i---V-G~p~A~lL~~~gAtVtv~h~~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDVg 232 (285)
T 3p2o_A 160 GKDAVIIGASNI---V-GRPMATMLLNAGATVSVCHIKTKDLSL---YTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVG 232 (285)
T ss_dssp TCEEEEECCCTT---T-HHHHHHHHHHTTCEEEEECTTCSCHHH---HHTTCSEEEECSSCTTCBCGGGSCTTEEEEECC
T ss_pred CCEEEEECCCch---H-HHHHHHHHHHCCCeEEEEeCCchhHHH---HhhcCCEEEECCCCCCcCCHHHcCCCeEEEEec
Confidence 457788888741 1 13456677788999988875 345554 467999999988865 55566789999999983
No 11
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=58.61 E-value=14 Score=35.66 Aligned_cols=71 Identities=15% Similarity=0.213 Sum_probs=50.7
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEEEe
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQVV 338 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIEi~ 338 (429)
.-++++|.|.+. + -.-+..+|...|.+|.+..- ..++++ .+++|||+|+.-|+. +-..=|++||++||.+-
T Consensus 161 Gk~vvVIG~s~i---V-G~p~A~lL~~~gAtVtv~hs~t~~L~~---~~~~ADIVI~Avg~p~~I~~~~vk~GavVIDvg 233 (285)
T 3l07_A 161 GAYAVVVGASNV---V-GKPVSQLLLNAKATVTTCHRFTTDLKS---HTTKADILIVAVGKPNFITADMVKEGAVVIDVG 233 (285)
T ss_dssp TCEEEEECCCTT---T-HHHHHHHHHHTTCEEEEECTTCSSHHH---HHTTCSEEEECCCCTTCBCGGGSCTTCEEEECC
T ss_pred CCEEEEECCCch---h-HHHHHHHHHHCCCeEEEEeCCchhHHH---hcccCCEEEECCCCCCCCCHHHcCCCcEEEEec
Confidence 446788888641 1 13456677788999988764 345554 467999999988865 55555779999999983
No 12
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=58.54 E-value=24 Score=33.67 Aligned_cols=78 Identities=18% Similarity=0.075 Sum_probs=49.9
Q ss_pred HHHHHHHhcCC-EEEEeeCC-------------CCHHHHHHHhccCcEEEEechhhhhhh-------cccCCCcEEEEEe
Q 037469 280 EIAQMGRRLGF-NVVVAEAN-------------GNLSRFAETVNYCDVFLAVHGAAMTNM-------IFLPENAVFIQVV 338 (429)
Q Consensus 280 ev~~~l~~~Gf-~V~v~e~~-------------~~~~q~~~l~~sadVlVGvHGAGLTN~-------lFl~pga~vIEi~ 338 (429)
.++.+|.+.|. +|.+.+-+ .++++....+..+|++|..-.+|+..- -+++++++|+++.
T Consensus 131 aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~v 210 (277)
T 3don_A 131 GIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIV 210 (277)
T ss_dssp HHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSSCCTTCCSSCEEEESC
T ss_pred HHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEec
Confidence 45566677777 66665431 146677777889999999988887432 2468899999986
Q ss_pred eCCCCccccCcchHhHHhhCCCeE
Q 037469 339 PFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 339 P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
-.- ..+.|-..|+..|.+.
T Consensus 211 Y~P-----~~T~ll~~A~~~G~~~ 229 (277)
T 3don_A 211 YNP-----YKTPILIEAEQRGNPI 229 (277)
T ss_dssp CSS-----SSCHHHHHHHHTTCCE
T ss_pred CCC-----CCCHHHHHHHHCcCEE
Confidence 321 1345778889888864
No 13
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=49.09 E-value=16 Score=35.88 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=50.4
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCC---------------CC--------HHHHHHHhccCcEEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEAN---------------GN--------LSRFAETVNYCDVFLA 316 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~---------------~~--------~~q~~~l~~sadVlVG 316 (429)
..-++++|.|.. ++. .-++..|.+.|.+|.+.+-+ .+ .++....++.|||+|+
T Consensus 176 ~gk~vvVIG~G~---iVG-~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSE---IVG-RPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCT---TTH-HHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCc---chH-HHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 345788888863 111 23556677778888877321 11 2677788889999999
Q ss_pred echhh--hhhhcccCCCcEEEEE
Q 037469 317 VHGAA--MTNMIFLPENAVFIQV 337 (429)
Q Consensus 317 vHGAG--LTN~lFl~pga~vIEi 337 (429)
.-|+- +-..=+++||++||-+
T Consensus 252 Atg~p~~vI~~e~vk~GavVIDV 274 (320)
T 1edz_A 252 GVPSENYKFPTEYIKEGAVCINF 274 (320)
T ss_dssp CCCCTTCCBCTTTSCTTEEEEEC
T ss_pred CCCCCcceeCHHHcCCCeEEEEc
Confidence 99985 2333446899999887
No 14
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=48.15 E-value=23 Score=31.52 Aligned_cols=45 Identities=13% Similarity=0.276 Sum_probs=32.3
Q ss_pred HHHHHHHhc-CCEEEEeeC---CCCHHHHHHHhc--cCcEEEEechhhhhh
Q 037469 280 EIAQMGRRL-GFNVVVAEA---NGNLSRFAETVN--YCDVFLAVHGAAMTN 324 (429)
Q Consensus 280 ev~~~l~~~-Gf~V~v~e~---~~~~~q~~~l~~--sadVlVGvHGAGLTN 324 (429)
+|.+.|++. |++|+.... ..++.+-..+.| .||++|++|--+..|
T Consensus 36 ~l~~~L~~~~G~~V~ltR~~D~~~~L~~R~~~an~~~adlfiSiH~Na~~~ 86 (179)
T 1jwq_A 36 KVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGS 86 (179)
T ss_dssp HHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEEEECCSS
T ss_pred HHHHHHHhCCCCEEEEeCCCCCCCCHHHHHHHHHhhCCCEEEEEccCCCCC
Confidence 566677788 999987654 256766655555 689999999766543
No 15
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=47.55 E-value=13 Score=35.52 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=55.2
Q ss_pred eEEEEecCCCccccCHHHHHHHHHhc--CCEEEEeeCCCCHHHHHHHhccCcEEEEechhhhhh-------hcccCCCcE
Q 037469 263 RLLIVSRKRTRAFTNAEEIAQMGRRL--GFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMTN-------MIFLPENAV 333 (429)
Q Consensus 263 rlliisR~~~R~i~Ne~ev~~~l~~~--Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAGLTN-------~lFl~pga~ 333 (429)
++++++|+.. ..+++.+.+... +.++...+. .+++ ..+..+|++|..-.+||.. .-+++++.+
T Consensus 153 ~v~i~~R~~~----~a~~la~~~~~~~~~~~i~~~~~-~~l~---~~l~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~ 224 (283)
T 3jyo_A 153 KLQVADLDTS----RAQALADVINNAVGREAVVGVDA-RGIE---DVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHW 224 (283)
T ss_dssp EEEEECSSHH----HHHHHHHHHHHHHTSCCEEEECS-TTHH---HHHHHSSEEEECSSTTSTTSCSCSSCGGGCCTTCE
T ss_pred EEEEEECCHH----HHHHHHHHHHhhcCCceEEEcCH-HHHH---HHHhcCCEEEECCCCCCCCCCCCCCCHHHhCCCCE
Confidence 5777776532 234555555544 345544432 2333 4456899999888888753 225678899
Q ss_pred EEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 334 FIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 334 vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
|++++-.- ..+.|-..|+..|.+.
T Consensus 225 v~DlvY~P-----~~T~ll~~A~~~G~~~ 248 (283)
T 3jyo_A 225 VGDVVYMP-----IETELLKAARALGCET 248 (283)
T ss_dssp EEECCCSS-----SSCHHHHHHHHHTCCE
T ss_pred EEEecCCC-----CCCHHHHHHHHCcCeE
Confidence 99987322 2567888899889764
No 16
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=47.39 E-value=20 Score=30.87 Aligned_cols=62 Identities=18% Similarity=0.241 Sum_probs=41.7
Q ss_pred CCCeEEEEecCC-CccccCHHHHHHHHHhcCCEEEEeeC-CC-CHHHHHHHhccCcEEE-E--echhhhh
Q 037469 260 KKPRLLIVSRKR-TRAFTNAEEIAQMGRRLGFNVVVAEA-NG-NLSRFAETVNYCDVFL-A--VHGAAMT 323 (429)
Q Consensus 260 ~~prlliisR~~-~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~-~~~q~~~l~~sadVlV-G--vHGAGLT 323 (429)
.+.-++|-|..| ++++. +.+.+.+++.|.+|.+.+. +. +.+++..-+..+|.+| | ++|..+.
T Consensus 5 ~kv~IvY~S~~GnT~~iA--~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p 72 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLA--QAIINGITKTGVGVDVVDLGAAVDLQELRELVGRCTGLVIGMSPAASAAS 72 (159)
T ss_dssp CEEEEEECTTSTTHHHHH--HHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHTEEEEEEECCBTTSHHH
T ss_pred CEEEEEEECCChHHHHHH--HHHHHHHHHCCCeEEEEECcCcCCHHHHHHHHHhCCEEEEEcCcCCCCcc
Confidence 345566777775 47776 5577777888999988887 45 7887776666778654 3 4554443
No 17
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=45.40 E-value=35 Score=29.64 Aligned_cols=52 Identities=17% Similarity=0.180 Sum_probs=35.4
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhcc
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNY 310 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~s 310 (429)
.++|++++..=.+--.=+...-+...++..||+|+....+.+.++++..+..
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~ 67 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ 67 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh
Confidence 4678888765554433344455667788899999977666787777666553
No 18
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=44.13 E-value=19 Score=31.84 Aligned_cols=52 Identities=17% Similarity=0.255 Sum_probs=34.3
Q ss_pred CeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhccCc---EEEEe
Q 037469 262 PRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNYCD---VFLAV 317 (429)
Q Consensus 262 prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~sad---VlVGv 317 (429)
|++++|+-- ..+ ...+++++++.|.+++++..+.+.+++...+...+ +++..
T Consensus 1 ~~i~iiDn~--~s~--~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~g 55 (192)
T 1i1q_B 1 ADILLLDNI--DSF--TWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSP 55 (192)
T ss_dssp CEEEEEECS--CSS--HHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECC
T ss_pred CcEEEEECC--ccH--HHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECC
Confidence 578888822 223 35568899999999988876556666655554333 66654
No 19
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=42.22 E-value=18 Score=34.87 Aligned_cols=73 Identities=15% Similarity=0.218 Sum_probs=49.9
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhc--CCEEEEeeCCCCHHHHHHHhccCcEEEEechhh-hhhhcccCCCcEEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRL--GFNVVVAEANGNLSRFAETVNYCDVFLAVHGAA-MTNMIFLPENAVFIQ 336 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~--Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAG-LTN~lFl~pga~vIE 336 (429)
..-++++|.|.+. +. .-+...|.+. |..|.+..-.+ +++...++.|||+|+.=|+. +-..=|++||++||-
T Consensus 157 ~gk~vvVvG~s~i---VG-~p~A~lL~~~g~~atVtv~h~~t--~~L~~~~~~ADIVI~Avg~p~~I~~~~vk~GavVID 230 (281)
T 2c2x_A 157 AGAHVVVIGRGVT---VG-RPLGLLLTRRSENATVTLCHTGT--RDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVID 230 (281)
T ss_dssp TTCEEEEECCCTT---TH-HHHHHHHTSTTTCCEEEEECTTC--SCHHHHHTTCSEEEECSCCTTCBCGGGSCTTCEEEE
T ss_pred CCCEEEEECCCcH---HH-HHHHHHHhcCCCCCEEEEEECch--hHHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEE
Confidence 3447888988641 11 2255566677 78888876421 33445567999999999876 655556799999998
Q ss_pred Ee
Q 037469 337 VV 338 (429)
Q Consensus 337 i~ 338 (429)
+-
T Consensus 231 Vg 232 (281)
T 2c2x_A 231 VG 232 (281)
T ss_dssp CC
T ss_pred cc
Confidence 73
No 20
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=40.65 E-value=34 Score=31.84 Aligned_cols=45 Identities=13% Similarity=0.162 Sum_probs=31.3
Q ss_pred HHHHHHHhcC-CEEEEeeC---CCCHHHHHHHhc--cCcEEEEechhhhhh
Q 037469 280 EIAQMGRRLG-FNVVVAEA---NGNLSRFAETVN--YCDVFLAVHGAAMTN 324 (429)
Q Consensus 280 ev~~~l~~~G-f~V~v~e~---~~~~~q~~~l~~--sadVlVGvHGAGLTN 324 (429)
.|.+.|++.| ++|+.... ..++.+-..+.| .||++|++|--+..+
T Consensus 38 ~l~~~L~~~g~~~V~~tR~~D~~~~l~~R~~~An~~~adlfiSiH~Na~~~ 88 (234)
T 3ne8_A 38 ALRDELQKGSHTIVALTRDSDIFLRLSERVKKAQEFDADLFISIHADTIDV 88 (234)
T ss_dssp HHHHHHHHSSSEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEECCCCSC
T ss_pred HHHHHHHhCCCcEEEEeCCCCCcCCHHHHHHHHHhhCCCEEEEEecCCCCC
Confidence 3455566677 99987654 256776666655 799999999766554
No 21
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=39.38 E-value=86 Score=29.75 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=40.1
Q ss_pred HHHHHHhccCcEEEEechhhhhh--------hcccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCeEE
Q 037469 302 SRFAETVNYCDVFLAVHGAAMTN--------MIFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLRYL 363 (429)
Q Consensus 302 ~q~~~l~~sadVlVGvHGAGLTN--------~lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y~ 363 (429)
++....+..+|++|..-++|+.- .-++++|++|+++.-.- ..+.+...|+..|.+++
T Consensus 196 ~~~~~~~~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~P-----~~T~ll~~A~~~G~~~v 260 (297)
T 2egg_A 196 AEAETRLAEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYNP-----LETKWLKEAKARGARVQ 260 (297)
T ss_dssp HHHHHTGGGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCSS-----SSCHHHHHHHHTTCEEE
T ss_pred HHHHhhhccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCCC-----CCCHHHHHHHHCcCEEE
Confidence 44555677899999999999841 12457899999986311 13347777899998764
No 22
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=38.62 E-value=42 Score=30.01 Aligned_cols=38 Identities=21% Similarity=0.250 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCEEEEeeC--CCCHHHHHHHhccCcEEEE
Q 037469 279 EEIAQMGRRLGFNVVVAEA--NGNLSRFAETVNYCDVFLA 316 (429)
Q Consensus 279 ~ev~~~l~~~Gf~V~v~e~--~~~~~q~~~l~~sadVlVG 316 (429)
+++++.+++.|.+|.+++. +.++++..+.+..||++|=
T Consensus 37 ~~~~~~~~~~g~~v~~~dL~~~~d~~~~~~~l~~AD~iV~ 76 (204)
T 2amj_A 37 EVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIW 76 (204)
T ss_dssp HHHHHHHHHTTCEEEEEESSSCCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHcCCEEEEEeCCccccHHHHHHHHHhCCEEEE
Confidence 4556666667889888887 3567777777778898773
No 23
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=38.56 E-value=32 Score=29.42 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=34.7
Q ss_pred eEEEEecCC-CccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEE
Q 037469 263 RLLIVSRKR-TRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFL 315 (429)
Q Consensus 263 rlliisR~~-~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlV 315 (429)
-++|-|..| ++++. +.+.+.+++.|.+|.+.+. +.+.+++..-+.++|.+|
T Consensus 4 ~IvY~S~tGnT~~~A--~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~ii 56 (161)
T 3hly_A 4 LIGYLSDYGYSDRLS--QAIGRGLVKTGVAVEMVDLRAVDPQELIEAVSSARGIV 56 (161)
T ss_dssp EEEECTTSTTHHHHH--HHHHHHHHHTTCCEEEEETTTCCHHHHHHHHHHCSEEE
T ss_pred EEEEECCChHHHHHH--HHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHhCCEEE
Confidence 466777775 45555 4566677777999888887 466777765566778654
No 24
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=37.89 E-value=55 Score=31.28 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=38.0
Q ss_pred CCCeEEEEecC---C--CccccCHHHHHHHHHhcCCEEEEeeC-CCC------------HHHHHHHhccCcEEEE
Q 037469 260 KKPRLLIVSRK---R--TRAFTNAEEIAQMGRRLGFNVVVAEA-NGN------------LSRFAETVNYCDVFLA 316 (429)
Q Consensus 260 ~~prlliisR~---~--~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~------------~~q~~~l~~sadVlVG 316 (429)
..+++++|.=. + ++++. +++++.+++.|.+|.+++. +++ +.++...+..||.+|=
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La--~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~ 129 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAV--EEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVW 129 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHH--HHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHH--HHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEE
Confidence 45688888733 1 23443 4466666777999998887 444 6778888889999873
No 25
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=37.33 E-value=47 Score=29.44 Aligned_cols=43 Identities=26% Similarity=0.226 Sum_probs=27.4
Q ss_pred HHHHHHHhcCCEE-EEeeC-C--C----CHHHHHHHhc--cCcEEEEechhhh
Q 037469 280 EIAQMGRRLGFNV-VVAEA-N--G----NLSRFAETVN--YCDVFLAVHGAAM 322 (429)
Q Consensus 280 ev~~~l~~~Gf~V-~v~e~-~--~----~~~q~~~l~~--sadVlVGvHGAGL 322 (429)
.|.+.|++.|++| +++.- + . ++.+-..+.| .||++|++|--+.
T Consensus 37 ~l~~~L~~~G~~V~v~ltR~d~~~~~~~~L~~R~~~An~~~aDlfISIH~Na~ 89 (180)
T 3qay_A 37 VLADTFRKEGHKVDVIICPEKQFKTKNEEKSYKIPRVNSGGYDLLIELHLNAS 89 (180)
T ss_dssp HHHHHHHHTTCEEEEECCCSSCCSSTTHHHHHHHHHHHHSCCSEEEEEEEECS
T ss_pred HHHHHHHhcCCcceEEECCCCCccccccCHHHHHHHHHhcCCCEEEEeeeCCC
Confidence 3556667779996 33322 1 1 3665555554 5999999997654
No 26
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=36.38 E-value=46 Score=31.72 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=41.9
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHH-------HHHH--hccCcE---EEEechhhhhhhcc
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSR-------FAET--VNYCDV---FLAVHGAAMTNMIF 327 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q-------~~~l--~~sadV---lVGvHGAGLTN~lF 327 (429)
++-..+||+..+ .+.+.|.+.++++||+|.+.+ +++.+| +++. ++.+|. +|--||- -+.++
T Consensus 42 ~rG~~LIinn~~----~D~~~L~~~f~~LgF~V~~~~-dlt~~em~~~l~~~~~~~dh~~~d~~v~~ilSHG~--~g~i~ 114 (272)
T 3h11_A 42 PLGICLIIDCIG----NETELLRDTFTSLGYEVQKFL-HLSMHGISQILGQFACMPEHRDYDSFVCVLVSRGG--SQSVY 114 (272)
T ss_dssp SSEEEEEEESSC----CCCSHHHHHHHHHTEEEEEEE-SCBHHHHHHHHHHHHTCGGGGGCSEEEEEEEEEEE--TTEEC
T ss_pred cceEEEEECCch----HHHHHHHHHHHHCCCEEEEee-CCCHHHHHHHHHHHHhccccCCCCEEEEEEEcCCC--CCeEE
Confidence 444568888775 366788999999999998877 555433 3221 333444 4566776 36666
Q ss_pred cCCC
Q 037469 328 LPEN 331 (429)
Q Consensus 328 l~pg 331 (429)
.-.|
T Consensus 115 g~D~ 118 (272)
T 3h11_A 115 GVDQ 118 (272)
T ss_dssp BTSC
T ss_pred EEcC
Confidence 6555
No 27
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=35.52 E-value=23 Score=36.66 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=68.6
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEech-hhhhhhcccCC--CcEE
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHG-AAMTNMIFLPE--NAVF 334 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHG-AGLTN~lFl~p--ga~v 334 (429)
..++++-||.=- ..--|..|+.+.|++.|++|+.+-+ +.+++++..+- +|++-|.++. +|..=.-+|.. |.-.
T Consensus 218 ~~~~~VNIiG~~--~~~gD~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~~~-~A~~niv~~~~~~~~~A~~Le~~~GiP~ 294 (492)
T 3u7q_A 218 STPYDVAIIGDY--NIGGDAWSSRILLEEMGLRCVAQWSGDGSISEIELTP-KVKLNLVHCYRSMNYISRHMEEKYGIPW 294 (492)
T ss_dssp CCTTEEEEEEEC--CBTTTTHHHHHHHHHTTCEEEEEEETTCCHHHHHHGG-GCSEEEESCHHHHHHHHHHHHHHHCCCE
T ss_pred CCCCcEEEECCC--CChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhh-cCcEEEEEChHHHHHHHHHHHHHhCCce
Confidence 445677777522 2234678999999999999986544 68999998876 6788887653 56555556643 7888
Q ss_pred EEEeeCCCCccccCcchHhHHhhCCC
Q 037469 335 IQVVPFGGFAWLARTDYEEPAKAMKL 360 (429)
Q Consensus 335 IEi~P~g~~~~~~~~~y~~~A~~~Gl 360 (429)
+++-|+| .+. ...+++.+|+..|.
T Consensus 295 i~~~p~G-~~~-T~~~L~~ia~~~g~ 318 (492)
T 3u7q_A 295 MEYNFFG-PTK-TIESLRAIAAKFDE 318 (492)
T ss_dssp EECCCSS-HHH-HHHHHHHHHTTSCH
T ss_pred EecCccC-HHH-HHHHHHHHHHHhCC
Confidence 8887887 432 24678888888883
No 28
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=35.36 E-value=44 Score=30.47 Aligned_cols=59 Identities=8% Similarity=-0.045 Sum_probs=38.7
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhccCcE-EEEe
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNYCDV-FLAV 317 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~sadV-lVGv 317 (429)
..++++++-.=.+--.=+...-+...++..||+|+.+..+.+.++++..+...+. +||+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l 149 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLL 149 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEE
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 4678888776555444444455677889999999977767888877655544333 4555
No 29
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=34.23 E-value=90 Score=29.82 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=38.0
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhccCcEEEEechhhhh
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMT 323 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAGLT 323 (429)
++-++.++.+.+.. .+++.+.|++.|++|.+.+... ..+..+|++|.+=|=|--
T Consensus 28 ~~mki~iv~~~~~~----~~~l~~~L~~~g~~v~~~~~~~------~~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 28 GGMRAAVVYKTDGH----VKRIEEALKRLEVEVELFNQPS------EELENFDFIVSVGGDGTI 81 (278)
T ss_dssp --CEEEEEESSSTT----HHHHHHHHHHTTCEEEEESSCC------GGGGGSSEEEEEECHHHH
T ss_pred cceEEEEEeCCcHH----HHHHHHHHHHCCCEEEEccccc------cccCCCCEEEEECCCHHH
Confidence 34578888886543 7889999999999997654311 123578999988887743
No 30
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=33.57 E-value=94 Score=27.40 Aligned_cols=66 Identities=12% Similarity=0.226 Sum_probs=43.1
Q ss_pred CCCCeEEEEecC----------CCccccCHHHHHHHHHhcCCEEEEeeC--C-C-CHH-HHHHHhcc--CcEEEEechhh
Q 037469 259 KKKPRLLIVSRK----------RTRAFTNAEEIAQMGRRLGFNVVVAEA--N-G-NLS-RFAETVNY--CDVFLAVHGAA 321 (429)
Q Consensus 259 ~~~prlliisR~----------~~R~i~Ne~ev~~~l~~~Gf~V~v~e~--~-~-~~~-q~~~l~~s--adVlVGvHGAG 321 (429)
.++||+-+|+=. |...=.|-.-+.+.+++.|++++...- | . .+. .+.+.... +|++|-.=|.|
T Consensus 13 ~~~~rv~IittGde~~~~~~~~G~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 13 PKSLNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CCCCEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CCCCEEEEEEeCcccccccccCCeEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 467888777644 233334556788999999999864332 2 1 232 33445555 89999998888
Q ss_pred hhh
Q 037469 322 MTN 324 (429)
Q Consensus 322 LTN 324 (429)
.+.
T Consensus 93 ~g~ 95 (178)
T 2pjk_A 93 YSP 95 (178)
T ss_dssp SST
T ss_pred CCC
Confidence 765
No 31
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=32.94 E-value=48 Score=30.45 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=28.5
Q ss_pred HHHHHHHHhcCCEEEEeeC--CCCHHHHHHHhccCcEEEE
Q 037469 279 EEIAQMGRRLGFNVVVAEA--NGNLSRFAETVNYCDVFLA 316 (429)
Q Consensus 279 ~ev~~~l~~~Gf~V~v~e~--~~~~~q~~~l~~sadVlVG 316 (429)
+++++.+++.|.+|.+.+. +.++++..+.+..||++|=
T Consensus 50 ~~~~~~l~~~g~ev~~~dL~~~~Dv~~~~~~l~~aD~iv~ 89 (218)
T 3rpe_A 50 NVAADFLRESGHQVKITTVDQGYDIESEIENYLWADTIIY 89 (218)
T ss_dssp HHHHHHHHHTTCCEEEEEGGGCCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhhCCCEEEEEECCCccCHHHHHHHHHhCCEEEE
Confidence 4566677777999998887 4678766677778998764
No 32
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=32.55 E-value=98 Score=29.17 Aligned_cols=48 Identities=17% Similarity=0.084 Sum_probs=35.5
Q ss_pred ccCcEEEEechhhhhhh------cccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCe
Q 037469 309 NYCDVFLAVHGAAMTNM------IFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLR 361 (429)
Q Consensus 309 ~sadVlVGvHGAGLTN~------lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~ 361 (429)
..+|++|..-.+|+..- =+++++++|++++-.- ..+.|-..|+..|.+
T Consensus 180 ~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P-----~~T~ll~~A~~~G~~ 233 (272)
T 3pwz_A 180 QSFDIVVNATSASLTADLPPLPADVLGEAALAYELAYGK-----GLTPFLRLAREQGQA 233 (272)
T ss_dssp CCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSC-----CSCHHHHHHHHHSCC
T ss_pred cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCC-----CCCHHHHHHHHCCCC
Confidence 57899999999987532 2467889999986321 145687889999986
No 33
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=31.81 E-value=51 Score=27.64 Aligned_cols=54 Identities=15% Similarity=0.093 Sum_probs=32.2
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhc--cCcEE
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVN--YCDVF 314 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~--sadVl 314 (429)
+|++++..=.+--.=+...=+...++..||+|+.+..+.+.+++++... .+|++
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v 58 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAI 58 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEE
Confidence 4666655433332223334455677888999987666677777766554 34543
No 34
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=31.74 E-value=65 Score=31.03 Aligned_cols=61 Identities=18% Similarity=0.118 Sum_probs=41.9
Q ss_pred CCCCeEEEEecCCC-------ccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhccCcEEEEech
Q 037469 259 KKKPRLLIVSRKRT-------RAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNYCDVFLAVHG 319 (429)
Q Consensus 259 ~~~prlliisR~~~-------R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHG 319 (429)
..+|++-|....+. ..-.|..++++++++.|.+++++..+.+.+++..++..+|-||=.=|
T Consensus 28 ~~~P~IGI~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~vv~~~~~~~~i~~~l~~~dglil~GG 95 (315)
T 1l9x_A 28 AKKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGG 95 (315)
T ss_dssp CCCCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCC
T ss_pred CCCCEEEEECCcccccccccCcceehHHHHHHHHHHCCCEEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 35788888765432 12235567999999999999888765556666666667787765444
No 35
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=31.51 E-value=80 Score=28.50 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=42.9
Q ss_pred CCeEEEEecCCC--ccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEechhhh
Q 037469 261 KPRLLIVSRKRT--RAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHGAAM 322 (429)
Q Consensus 261 ~prlliisR~~~--R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHGAGL 322 (429)
.+|++||.=... ..-.|.+.+.+++++.|+++.+++. +.+-++..+.+.+||.++=.-|.-.
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~ 91 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTF 91 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCHH
Confidence 489999973321 2224678899999999999987764 3456666667778999875445443
No 36
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=31.40 E-value=78 Score=28.27 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=46.1
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcC--CEEEEeeCCCCHHHHHHHhcc-----CcEEEEech--hhhhhhcccC
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLG--FNVVVAEANGNLSRFAETVNY-----CDVFLAVHG--AAMTNMIFLP 329 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~G--f~V~v~e~~~~~~q~~~l~~s-----adVlVGvHG--AGLTN~lFl~ 329 (429)
.-+|++.||.=.. --+---+|..+.|++.| ||+.+...+-+.++..++..+ ++|+|++=| |+|.-++=--
T Consensus 9 ~~~~~V~IimGS~-SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~ 87 (170)
T 1xmp_A 9 HMKSLVGVIMGST-SDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAK 87 (170)
T ss_dssp --CCSEEEEESSG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTT
T ss_pred cCCCcEEEEECcH-HHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhc
Confidence 3578888887442 33333467778888886 688888876666655555532 789988755 2333333333
Q ss_pred CCcEEEEE
Q 037469 330 ENAVFIQV 337 (429)
Q Consensus 330 pga~vIEi 337 (429)
.---||=+
T Consensus 88 t~~PVIgV 95 (170)
T 1xmp_A 88 TNLPVIGV 95 (170)
T ss_dssp CCSCEEEE
T ss_pred cCCCEEEe
Confidence 33345444
No 37
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=31.34 E-value=1.1e+02 Score=26.78 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=42.2
Q ss_pred CCCCeEEEEecCCC-cccc--CHHHHHHHHHhcCCEEEEeeC--C-C-CH-HHHHHHhcc--CcEEEEechhhhhh
Q 037469 259 KKKPRLLIVSRKRT-RAFT--NAEEIAQMGRRLGFNVVVAEA--N-G-NL-SRFAETVNY--CDVFLAVHGAAMTN 324 (429)
Q Consensus 259 ~~~prlliisR~~~-R~i~--Ne~ev~~~l~~~Gf~V~v~e~--~-~-~~-~q~~~l~~s--adVlVGvHGAGLTN 324 (429)
-++||+-+|+=... -++. |-.-+.+.|++.|+++....- + . .+ +.+....++ +|++|--=|.|.|.
T Consensus 8 ~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~ 83 (172)
T 1mkz_A 8 FIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTE 83 (172)
T ss_dssp CCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSST
T ss_pred CCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC
Confidence 45678777764321 2344 456788899999998864332 2 1 23 334444443 89999999998775
No 38
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=30.96 E-value=58 Score=28.96 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=20.4
Q ss_pred CHHHHHHHHHhcCCEEEEeeCCCCHHHHH
Q 037469 277 NAEEIAQMGRRLGFNVVVAEANGNLSRFA 305 (429)
Q Consensus 277 Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~ 305 (429)
+.+.|.+.++++||+|.+.+ +++.+|+.
T Consensus 66 Da~~L~~~f~~LgF~V~~~~-dlt~~em~ 93 (178)
T 2h54_A 66 DITGMTMLLQNLGYSVDVKK-NLTASDMT 93 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEE-SCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEec-CCCHHHHH
Confidence 34678888999999998776 56654443
No 39
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=30.83 E-value=93 Score=27.84 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=39.4
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcC--CEEEEeeCCCCHHHHHHHh-----ccCcEEEEech
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLG--FNVVVAEANGNLSRFAETV-----NYCDVFLAVHG 319 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~G--f~V~v~e~~~~~~q~~~l~-----~sadVlVGvHG 319 (429)
..+|++.+|.=.. --+-=-+|..+.|++.| ||+.+...+-+.++..++. +.++|+|++=|
T Consensus 5 ~~~~~V~IimgS~-SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG 71 (174)
T 3lp6_A 5 GERPRVGVIMGSD-SDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAG 71 (174)
T ss_dssp -CCCSEEEEESCG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCCeEEEEECcH-HhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecC
Confidence 4567888877442 23333467778888886 6888888765555554443 46899988755
No 40
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=30.68 E-value=1.4e+02 Score=28.31 Aligned_cols=89 Identities=10% Similarity=0.072 Sum_probs=56.0
Q ss_pred CeEEEEecCCCccccCHHHHHHHHHhcCC-EEEEeeCCC-------------CHHHHHHHhccCcEEEEechhhhhh---
Q 037469 262 PRLLIVSRKRTRAFTNAEEIAQMGRRLGF-NVVVAEANG-------------NLSRFAETVNYCDVFLAVHGAAMTN--- 324 (429)
Q Consensus 262 prlliisR~~~R~i~Ne~ev~~~l~~~Gf-~V~v~e~~~-------------~~~q~~~l~~sadVlVGvHGAGLTN--- 324 (429)
-+++++.-.+. -..++.+|.+.|. +|.++.-+. ++++... + .+|++|..-.+||..
T Consensus 123 k~vlvlGaGGa-----araia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~ 195 (282)
T 3fbt_A 123 NICVVLGSGGA-----ARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEG 195 (282)
T ss_dssp SEEEEECSSTT-----HHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTT
T ss_pred CEEEEECCcHH-----HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCc
Confidence 35666664432 2345666677777 666655311 1233323 3 789999988888742
Q ss_pred -----hcccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 325 -----MIFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 325 -----~lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
.-+++++++|++++-.- ..+.|-..|+..|.+.
T Consensus 196 ~~pi~~~~l~~~~~v~DlvY~P-----~~T~ll~~A~~~G~~~ 233 (282)
T 3fbt_A 196 ESPVDKEVVAKFSSAVDLIYNP-----VETLFLKYARESGVKA 233 (282)
T ss_dssp CCSSCHHHHTTCSEEEESCCSS-----SSCHHHHHHHHTTCEE
T ss_pred cCCCCHHHcCCCCEEEEEeeCC-----CCCHHHHHHHHCcCeE
Confidence 12467899999986321 2567888999999764
No 41
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=30.49 E-value=1.1e+02 Score=28.35 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=37.1
Q ss_pred CCCeEEEEecCCCccccCH----HHHHHHHHhcCCEEEEeeC-CCC-----------HHHHHHHhccCcEEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNA----EEIAQMGRRLGFNVVVAEA-NGN-----------LSRFAETVNYCDVFLA 316 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne----~ev~~~l~~~Gf~V~v~e~-~~~-----------~~q~~~l~~sadVlVG 316 (429)
...++++|.=. .|+=-|- +.+++.+++.|.+|.+++. +++ +.++...+.+||.+|=
T Consensus 33 ~~mkIliI~GS-~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~ 104 (247)
T 2q62_A 33 HRPRILILYGS-LRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVW 104 (247)
T ss_dssp SCCEEEEEECC-CCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEE
T ss_pred CCCeEEEEEcc-CCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEE
Confidence 45678887733 1222222 3455566667999998887 455 7778888889998774
No 42
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=30.41 E-value=18 Score=36.96 Aligned_cols=98 Identities=13% Similarity=0.039 Sum_probs=68.9
Q ss_pred CCCCeEEEE-ecCCCccccCHHHHHHHHHhcCCEEEEee-------------------C-CCCHHHHHHHhccCcEEEEe
Q 037469 259 KKKPRLLIV-SRKRTRAFTNAEEIAQMGRRLGFNVVVAE-------------------A-NGNLSRFAETVNYCDVFLAV 317 (429)
Q Consensus 259 ~~~prllii-sR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e-------------------~-~~~~~q~~~l~~sadVlVGv 317 (429)
..++++-|| .=. -.--|..|+.+.|++.|++++.+- . +.+++++.++- +|++-|.+
T Consensus 167 ~~~~~VNii~G~~--~~~~D~~eik~lL~~~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~-~A~~ni~~ 243 (458)
T 3pdi_B 167 KRPRQVNVLCSAN--LTPGDLEYIAESIESFGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAG-QSVATLVV 243 (458)
T ss_dssp CCSSEEEEEECTT--CCHHHHHHHHHHHHTTTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGS-SCSCEEEE
T ss_pred CCCCeEEEEeCCC--CChHHHHHHHHHHHHcCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhh-hCcEEEEe
Confidence 456677777 321 223456889999999999998752 1 45799998765 56777778
Q ss_pred chhhhhhhcccCC--CcEEEEE-eeCCCCccccCcchHhHHhhCCCe
Q 037469 318 HGAAMTNMIFLPE--NAVFIQV-VPFGGFAWLARTDYEEPAKAMKLR 361 (429)
Q Consensus 318 HGAGLTN~lFl~p--ga~vIEi-~P~g~~~~~~~~~y~~~A~~~Gl~ 361 (429)
+..+..-.-+|.. |.-.+++ .|+| .+. ...+.+.+|+..|..
T Consensus 244 ~~~~~~~A~~Le~~~GiP~~~~~~p~G-~~~-T~~~l~~la~~~g~~ 288 (458)
T 3pdi_B 244 GQSLAGAADALAERTGVPDRRFGMLYG-LDA-VDAWLMALAEISGNP 288 (458)
T ss_dssp SGGGHHHHHHHHHHSCCCEEEECCSCH-HHH-HHHHHHHHHHHHSSC
T ss_pred cHHHHHHHHHHHHHHCCCEEecCCCcC-HHH-HHHHHHHHHHHHCCc
Confidence 8776555556643 7888887 6888 433 356788999988874
No 43
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=30.05 E-value=78 Score=31.96 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCEEEEeeCCCCH-----------------------------------------HHHHHHhccCcEEEEec
Q 037469 280 EIAQMGRRLGFNVVVAEANGNL-----------------------------------------SRFAETVNYCDVFLAVH 318 (429)
Q Consensus 280 ev~~~l~~~Gf~V~v~e~~~~~-----------------------------------------~q~~~l~~sadVlVGvH 318 (429)
..++.++..|.+|.+.+.+..- +.+...+..|||+|+..
T Consensus 204 ~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tv 283 (405)
T 4dio_A 204 QAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTA 283 (405)
T ss_dssp HHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECC
Q ss_pred hhh-------hhhhcc--cCCCcEEE
Q 037469 319 GAA-------MTNMIF--LPENAVFI 335 (429)
Q Consensus 319 GAG-------LTN~lF--l~pga~vI 335 (429)
+.- +|.-+. |+||+++|
T Consensus 284 lipg~~ap~Lvt~emv~~Mk~GsVIV 309 (405)
T 4dio_A 284 LIPGRPAPRLVTREMLDSMKPGSVVV 309 (405)
T ss_dssp CCSSSCCCCCBCHHHHTTSCTTCEEE
T ss_pred cCCCCCCCEEecHHHHhcCCCCCEEE
No 44
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=29.91 E-value=19 Score=37.60 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=70.7
Q ss_pred CCCeEEEEecC--CCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEech-hhhhhhcccCC--CcE
Q 037469 260 KKPRLLIVSRK--RTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVHG-AAMTNMIFLPE--NAV 333 (429)
Q Consensus 260 ~~prlliisR~--~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvHG-AGLTN~lFl~p--ga~ 333 (429)
.++++-||.=. +...--|..|+.+.|++.|.+|+.+-+ +.+++++..+- +|+.-|.++- +|..=.=+|.. |.-
T Consensus 152 ~~~~VNIlG~~~~g~~~~gD~~eikrlL~~~Gi~v~~~~pgg~t~~ei~~~~-~A~~niv~~~~~g~~~A~~Le~r~GiP 230 (525)
T 3aek_B 152 PEVTCNLLGATALGFRHRDDVAEVTKLLATMGIKVNVCAPLGASPDDLRKLG-QAHFNVLMYPETGESAARHLERACKQP 230 (525)
T ss_dssp SSCEEEEEEECTTCTTHHHHHHHHHHHHHTTTCEEEEEEETTCCHHHHHTGG-GSSEEEECCHHHHHHHHHHHHHHSCCC
T ss_pred CCCceEEEecCCCCCCChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhc-cCCEEEEEChhhHHHHHHHHHHHcCCC
Confidence 45677777543 233334568899999999999987554 78999998866 6788777763 45555555543 666
Q ss_pred EEEEeeCCCCccccCcchHhHHhhCCCeE
Q 037469 334 FIQVVPFGGFAWLARTDYEEPAKAMKLRY 362 (429)
Q Consensus 334 vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y 362 (429)
.++..|.| .+. ...+.+.+|+..|...
T Consensus 231 ~i~~~PiG-~~~-T~~~Lr~ia~~~g~~~ 257 (525)
T 3aek_B 231 FTKIVPIG-VGA-TRDFLAEVSKITGLPV 257 (525)
T ss_dssp BCCCCCCS-HHH-HHHHHHHHHHHHCCCC
T ss_pred ceecCCcC-HHH-HHHHHHHHHHHHCCCH
Confidence 66678998 433 3568899999999865
No 45
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=29.61 E-value=13 Score=40.25 Aligned_cols=124 Identities=15% Similarity=0.237 Sum_probs=75.1
Q ss_pred CCeEEEEecCC-Ccccc--------------CHHHHHHHHHhcCCEEEEeeCCCCHHHHH--HHhccCcEEEEechhhhh
Q 037469 261 KPRLLIVSRKR-TRAFT--------------NAEEIAQMGRRLGFNVVVAEANGNLSRFA--ETVNYCDVFLAVHGAAMT 323 (429)
Q Consensus 261 ~prlliisR~~-~R~i~--------------Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~--~l~~sadVlVGvHGAGLT 323 (429)
..+|-++.=-| .|.+. ...=++++|...+++|.-+. ++++. ...+..|||| =+|.+
T Consensus 438 ~~kVAVLnsWGklRSW~~~~vaHak~~kq~ysy~GilEALsg~~~dV~FIs----fdDI~e~e~L~d~DVII---n~G~A 510 (759)
T 2zuv_A 438 ELNVAILNSWGKMRSWMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFIS----FDDVLAHGIDSDIDVII---NGGPV 510 (759)
T ss_dssp CSEEEEEESSGGGGTTTTTCSSTTCCCTTTHHHHHHHHHHHTSSSEEEEEE----HHHHHHHCCCTTCCEEE---EEECT
T ss_pred CceEEEEecCCCCcccccccccccccccccccHHHHHHHHhcCCCceEEec----HHHhccccccccCCEEE---ecCcc
Confidence 35777777554 23333 22339999999999997554 44442 3467899999 66777
Q ss_pred hhcccCC------------------CcEEEEEe-eCCCCccccCcchHhHHhhCCCeEEEEEeecCCCcccccCC----C
Q 037469 324 NMIFLPE------------------NAVFIQVV-PFGGFAWLARTDYEEPAKAMKLRYLEYKIKLDESTLIQQYP----L 380 (429)
Q Consensus 324 N~lFl~p------------------ga~vIEi~-P~g~~~~~~~~~y~~~A~~~Gl~Y~~y~i~~~Essl~~~y~----~ 380 (429)
|..|+.+ |..+|=+- |...-++ ...-|..+|..+|++...+.= . + .++|+ +
T Consensus 511 ~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGepSsfqg~-g~gryFqLADVLGVd~e~g~d-l---p-~gkY~~~~~~ 584 (759)
T 2zuv_A 511 DTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRF-QTGRFFQLADVIGVDEERYQT-L---S-VDKYFPPVVP 584 (759)
T ss_dssp TSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEESTTEEEEE-ETTEEETTHHHHSEEECCSSC-T---T-BCCBCCCCCC
T ss_pred hhcccCccccCCHHHHHHHHHHHHcCCcEEEeCCccccccc-cCcccccHHhhcCcccccCCc-C---C-CCccccccCC
Confidence 7777766 67777664 2211011 223444599999998765531 1 1 34554 4
Q ss_pred CCccccCCC--ccccccch
Q 037469 381 DHQVIRDPS--SIGKQGWN 397 (429)
Q Consensus 381 dh~v~~DP~--~~~~~gw~ 397 (429)
+|+++.|-. ...++||+
T Consensus 585 ~HfIl~di~~~~~~~~gwe 603 (759)
T 2zuv_A 585 DHFITADVPVDPAAREAWE 603 (759)
T ss_dssp SCTTTTTCCCCHHHHHHHH
T ss_pred CCceecccccccccccccc
Confidence 799888642 12345773
No 46
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.34 E-value=73 Score=27.74 Aligned_cols=67 Identities=13% Similarity=0.164 Sum_probs=40.8
Q ss_pred CCCCeEEEEecC-----CCccccCHHHHHHHHHhcCCEEEEee--C-CCCHH-HHHHHhc-cCcEEEEechhhhhhh
Q 037469 259 KKKPRLLIVSRK-----RTRAFTNAEEIAQMGRRLGFNVVVAE--A-NGNLS-RFAETVN-YCDVFLAVHGAAMTNM 325 (429)
Q Consensus 259 ~~~prlliisR~-----~~R~i~Ne~ev~~~l~~~Gf~V~v~e--~-~~~~~-q~~~l~~-sadVlVGvHGAGLTN~ 325 (429)
-++||+-+|+=. |...=.|-.-+.+.+++.|++++... + +..+. .+.+... .+|++|--=|.|.+--
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv~Dd~~i~~al~~a~~~~~DlVittGG~s~g~~ 81 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVADGSPVGEALRKAIDDDVDVILTSGGTGIAPT 81 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEECSSHHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEeCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 457887777644 23444567788899999999885322 1 31122 3334443 7899999988887653
No 47
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=29.21 E-value=36 Score=26.24 Aligned_cols=21 Identities=24% Similarity=0.260 Sum_probs=18.2
Q ss_pred ccccCHHHHHHHHHhcCCEEE
Q 037469 273 RAFTNAEEIAQMGRRLGFNVV 293 (429)
Q Consensus 273 R~i~Ne~ev~~~l~~~Gf~V~ 293 (429)
++=+|.+++++.|++.||+|+
T Consensus 58 ~~gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 58 LAGTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp HHTCCHHHHHHHHHHTTCEEE
T ss_pred HcCCCHHHHHHHHHHcCCEee
Confidence 444788999999999999996
No 48
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=27.99 E-value=1.2e+02 Score=26.84 Aligned_cols=59 Identities=10% Similarity=0.141 Sum_probs=37.6
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcC--CEEEEeeCCCCHHHHHHHh-----ccCcEEEEech
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLG--FNVVVAEANGNLSRFAETV-----NYCDVFLAVHG 319 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~G--f~V~v~e~~~~~~q~~~l~-----~sadVlVGvHG 319 (429)
.+|++.+|.=.. --+-=-+|..+.|++.| ||+.+...+-+.++..++. +.++|+|++=|
T Consensus 2 ~~~~V~Iimgs~-SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG 67 (163)
T 3ors_A 2 NAMKVAVIMGSS-SDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAG 67 (163)
T ss_dssp -CCCEEEEESCG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEE
T ss_pred CCCeEEEEECcH-HHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 356777776432 23333467778888886 6888888766665555554 24788888655
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=27.82 E-value=1.3e+02 Score=24.45 Aligned_cols=50 Identities=16% Similarity=0.333 Sum_probs=37.2
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhccCcEEEEe
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVNYCDVFLAV 317 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~sadVlVGv 317 (429)
..+++++.... ..+++.+.+++.|..+.. . ..+-++...+++.||++|-+
T Consensus 32 ~~~l~i~G~g~-----~~~~~~~~~~~~~~~v~~-g-~~~~~~~~~~~~~adv~v~p 81 (166)
T 3qhp_A 32 DIVLLLKGKGP-----DEKKIKLLAQKLGVKAEF-G-FVNSNELLEILKTCTLYVHA 81 (166)
T ss_dssp GEEEEEECCST-----THHHHHHHHHHHTCEEEC-C-CCCHHHHHHHHTTCSEEEEC
T ss_pred CeEEEEEeCCc-----cHHHHHHHHHHcCCeEEE-e-ecCHHHHHHHHHhCCEEEEC
Confidence 45677777532 357888888888886665 4 46778999999999999854
No 50
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=27.47 E-value=82 Score=31.53 Aligned_cols=40 Identities=15% Similarity=0.382 Sum_probs=27.0
Q ss_pred HHHHHhccCcEEEEec---hhh----hhhhcc--cCCCcEEEEEe-eCCC
Q 037469 303 RFAETVNYCDVFLAVH---GAA----MTNMIF--LPENAVFIQVV-PFGG 342 (429)
Q Consensus 303 q~~~l~~sadVlVGvH---GAG----LTN~lF--l~pga~vIEi~-P~g~ 342 (429)
.+...+..|||+|+.. |+. +|.-++ |+||+++|-+- +.|+
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG 307 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG 307 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred HHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC
Confidence 4557788999999864 321 233333 79999999984 4553
No 51
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=27.15 E-value=1.3e+02 Score=28.22 Aligned_cols=54 Identities=15% Similarity=0.242 Sum_probs=36.7
Q ss_pred HHHHhccCcEEEEechhhhhhh---cccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCeEE
Q 037469 304 FAETVNYCDVFLAVHGAAMTNM---IFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLRYL 363 (429)
Q Consensus 304 ~~~l~~sadVlVGvHGAGLTN~---lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y~ 363 (429)
...++..||++|..-+.++.|- -.|+||+.+|.+-- +. ....+ ..++..|+.++
T Consensus 209 l~~~l~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~-g~----~~~~~-~~a~~~G~~~i 265 (300)
T 2rir_A 209 LKEHVKDIDICINTIPSMILNQTVLSSMTPKTLILDLAS-RP----GGTDF-KYAEKQGIKAL 265 (300)
T ss_dssp HHHHSTTCSEEEECCSSCCBCHHHHTTSCTTCEEEECSS-TT----CSBCH-HHHHHHTCEEE
T ss_pred HHHHhhCCCEEEECCChhhhCHHHHHhCCCCCEEEEEeC-CC----CCcCH-HHHHHCCCEEE
Confidence 3455678999999888877653 23799999998852 21 11225 66777788765
No 52
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=26.92 E-value=1.4e+02 Score=26.75 Aligned_cols=60 Identities=10% Similarity=0.144 Sum_probs=39.3
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcC--CEEEEeeCCCCHHHHHHHh-----ccCcEEEEech
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLG--FNVVVAEANGNLSRFAETV-----NYCDVFLAVHG 319 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~G--f~V~v~e~~~~~~q~~~l~-----~sadVlVGvHG 319 (429)
...|++.||.=.. --+--.+|..+.|++.| ||+.+...+-+.++..++. +.++|+|++=|
T Consensus 10 ~~~P~V~IimGS~-SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG 76 (173)
T 4grd_A 10 HSAPLVGVLMGSS-SDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAG 76 (173)
T ss_dssp CSSCSEEEEESSG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEE
T ss_pred CCCCeEEEEeCcH-hHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEecc
Confidence 5678888887543 23333467778888886 6888888765544443332 45689887655
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=26.38 E-value=2.3e+02 Score=26.37 Aligned_cols=66 Identities=12% Similarity=0.195 Sum_probs=44.0
Q ss_pred cccc--CHHHHHHHHHhcCCEEEEe-------------------------eC--CCCHHHHHHHhccCcEEEEechhhhh
Q 037469 273 RAFT--NAEEIAQMGRRLGFNVVVA-------------------------EA--NGNLSRFAETVNYCDVFLAVHGAAMT 323 (429)
Q Consensus 273 R~i~--Ne~ev~~~l~~~Gf~V~v~-------------------------e~--~~~~~q~~~l~~sadVlVGvHGAGLT 323 (429)
|++- +-.++++.|.+.|++++++ +. .+++.|.+.+++.||++||.= +|..
T Consensus 195 k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~D-sg~~ 273 (348)
T 1psw_A 195 KRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTND-SGLM 273 (348)
T ss_dssp GSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEES-SHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecC-CHHH
Confidence 5554 5567777776657766542 11 356889999999999999984 4555
Q ss_pred hhcccCCCcEEEEEeeC
Q 037469 324 NMIFLPENAVFIQVVPF 340 (429)
Q Consensus 324 N~lFl~pga~vIEi~P~ 340 (429)
|+--+ =|.-+|-|+..
T Consensus 274 HlAaa-~g~P~v~lfg~ 289 (348)
T 1psw_A 274 HVAAA-LNRPLVALYGP 289 (348)
T ss_dssp HHHHH-TTCCEEEEESS
T ss_pred HHHHH-cCCCEEEEECC
Confidence 55333 46667777754
No 54
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.30 E-value=1.4e+02 Score=26.63 Aligned_cols=69 Identities=17% Similarity=0.145 Sum_probs=46.1
Q ss_pred CCCCeEEEEecC-----CCccccCHHHHHHHHHhcCCEEEEeeC--C-C-CHH-HHHHHh-ccCcEEEEechhhhhhhcc
Q 037469 259 KKKPRLLIVSRK-----RTRAFTNAEEIAQMGRRLGFNVVVAEA--N-G-NLS-RFAETV-NYCDVFLAVHGAAMTNMIF 327 (429)
Q Consensus 259 ~~~prlliisR~-----~~R~i~Ne~ev~~~l~~~Gf~V~v~e~--~-~-~~~-q~~~l~-~sadVlVGvHGAGLTN~lF 327 (429)
.++||+.+|+=. +. .=.|-.-+.+.+++.|++++...- + . .+. .+.+.+ ..+|++|--=|.|.+.-=+
T Consensus 28 ~~~~rvaIistGdEl~~G~-~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~ 106 (185)
T 3rfq_A 28 LVVGRALVVVVDDRTAHGD-EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDV 106 (185)
T ss_dssp -CCEEEEEEEECHHHHTTC-CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred CCCCEEEEEEECcccCCCC-cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCccc
Confidence 478888888743 23 455778889999999999864332 2 1 233 333444 5789999999998876433
Q ss_pred c
Q 037469 328 L 328 (429)
Q Consensus 328 l 328 (429)
.
T Consensus 107 t 107 (185)
T 3rfq_A 107 T 107 (185)
T ss_dssp H
T ss_pred H
Confidence 3
No 55
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=26.04 E-value=1.6e+02 Score=25.99 Aligned_cols=59 Identities=17% Similarity=0.165 Sum_probs=39.5
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCCCHHHHHHHhc--cCcEEEEec
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANGNLSRFAETVN--YCDVFLAVH 318 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~~~~q~~~l~~--sadVlVGvH 318 (429)
..++++++..=.+--.=+...=+...++..||+|+.+..+.+.+++...+. .+|+ ||+-
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~-v~lS 146 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDI-VGMS 146 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSE-EEEE
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCE-EEEe
Confidence 356777777655544445555666778889999998777788887766654 4454 4443
No 56
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=24.90 E-value=1.5e+02 Score=27.03 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=54.8
Q ss_pred eEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCCC-CHHHH-----------HHHhccCcEEEEechhhhh----h--
Q 037469 263 RLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEANG-NLSRF-----------AETVNYCDVFLAVHGAAMT----N-- 324 (429)
Q Consensus 263 rlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~~-~~~q~-----------~~l~~sadVlVGvHGAGLT----N-- 324 (429)
++++|...+ + -..++..+.+.|++|.+.+.+. ..+++ ..+ ..+|++|..-++++. .
T Consensus 118 ~v~iiG~G~---~--g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l 191 (263)
T 2d5c_A 118 PALVLGAGG---A--GRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSASPL 191 (263)
T ss_dssp CEEEECCSH---H--HHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCCSS
T ss_pred eEEEECCcH---H--HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCCCC
Confidence 777887542 1 0235566677787777766421 12222 123 679999999988863 2
Q ss_pred -hcccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCeEE
Q 037469 325 -MIFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLRYL 363 (429)
Q Consensus 325 -~lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~Y~ 363 (429)
.-++++|++|+++.- +. ..+.+...|+..|.+++
T Consensus 192 ~~~~l~~g~~viD~~~-~p----~~t~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 192 PAELFPEEGAAVDLVY-RP----LWTRFLREAKAKGLKVQ 226 (263)
T ss_dssp CGGGSCSSSEEEESCC-SS----SSCHHHHHHHHTTCEEE
T ss_pred CHHHcCCCCEEEEeec-CC----cccHHHHHHHHCcCEEE
Confidence 235789999999642 21 12236666777888664
No 57
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=24.67 E-value=80 Score=30.53 Aligned_cols=53 Identities=15% Similarity=0.138 Sum_probs=35.1
Q ss_pred CCeEEEEecCC-CccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEE
Q 037469 261 KPRLLIVSRKR-TRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFL 315 (429)
Q Consensus 261 ~prlliisR~~-~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlV 315 (429)
+.-+++.|..| ++++. +++.+.+++.|.++.+.+. +.+++++..-+.++|.+|
T Consensus 258 k~~i~~~S~~gnT~~la--~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~d~ii 312 (404)
T 2ohh_A 258 RVTVIYDTMHGSTRKMA--HAIAEGAMSEGVDVRVYCLHEDDRSEIVKDILESGAIA 312 (404)
T ss_dssp EEEEEECCSSSHHHHHH--HHHHHHHHTTTCEEEEEETTTSCHHHHHHHHHTCSEEE
T ss_pred cEEEEEECCChHHHHHH--HHHHHHHHhCCCeEEEEECCCCCHHHHHHHHHHCCEEE
Confidence 34455555544 35554 4455666667999988887 567777777777888866
No 58
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=24.23 E-value=1.6e+02 Score=26.00 Aligned_cols=68 Identities=15% Similarity=0.095 Sum_probs=44.2
Q ss_pred CeEEEEecC-----CCccccCHHHHHHHHHhcCCEEEEeeC--C--CCH-HHHHHHhccCcEEEEechhhhhhhcccC
Q 037469 262 PRLLIVSRK-----RTRAFTNAEEIAQMGRRLGFNVVVAEA--N--GNL-SRFAETVNYCDVFLAVHGAAMTNMIFLP 329 (429)
Q Consensus 262 prlliisR~-----~~R~i~Ne~ev~~~l~~~Gf~V~v~e~--~--~~~-~q~~~l~~sadVlVGvHGAGLTN~lFl~ 329 (429)
+|+-+|+=. |.+.=.|-.-+.+.|++.|+++....- + ..+ +.+.++...+|++|.-=|.|.|.-=+.+
T Consensus 4 ~~v~IistGdEll~G~i~DtN~~~l~~~L~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~DlVittGG~g~~~~D~T~ 81 (172)
T 3kbq_A 4 KNASVITVGNEILKGRTVNTNAAFIGNFLTYHGYQVRRGFVVMDDLDEIGWAFRVALEVSDLVVSSGGLGPTFDDMTV 81 (172)
T ss_dssp CEEEEEEECHHHHTTSSCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHHCSEEEEESCCSSSTTCCHH
T ss_pred CEEEEEEEcccccCCcEEeHHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCEEEEcCCCcCCcccchH
Confidence 555555432 345556778899999999998864332 2 123 3444556679999999999988643333
No 59
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=24.18 E-value=1.2e+02 Score=26.83 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=37.8
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhc----CCEEEEeeCCCCHHHHHHHhccCcEEEEechhhhhh
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRL----GFNVVVAEANGNLSRFAETVNYCDVFLAVHGAAMTN 324 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~----Gf~V~v~e~~~~~~q~~~l~~sadVlVGvHGAGLTN 324 (429)
..++++++. .+|.+.++ +.+.+++. |+.+.....+.+..+....++.+||+|+..|.-+.+
T Consensus 96 ~~~~~lil~--Pt~~L~~q--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iiv~Tp~~l~~~ 160 (236)
T 2pl3_A 96 DGLGVLIIS--PTRELAYQ--TFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQH 160 (236)
T ss_dssp GCCCEEEEC--SSHHHHHH--HHHHHHHHTTTSSCCEEEECCC--CHHHHHHHTTCSEEEECHHHHHHH
T ss_pred CCceEEEEe--CCHHHHHH--HHHHHHHHhCCCCeeEEEEECCCCHHHHHHhCCCCCEEEECHHHHHHH
Confidence 456777777 34666643 33444443 567766554455555555567899999999987654
No 60
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.17 E-value=31 Score=36.10 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=66.7
Q ss_pred CCCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEec-hhhhhhhcccCC--CcEEE
Q 037469 260 KKPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVH-GAAMTNMIFLPE--NAVFI 335 (429)
Q Consensus 260 ~~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvH-GAGLTN~lFl~p--ga~vI 335 (429)
.++++-||.=-. .--|..|+.+.|++.|.+|+..-+ +.+++++..+- +|++-|.++ -+|..=+=+|.. |.-.+
T Consensus 205 ~~~~VNIlG~~~--~~gD~~eikrlL~~~Gi~v~~~~~gg~t~~ei~~~~-~A~~niv~~~~~~~~~A~~Leer~GiP~i 281 (533)
T 1mio_A 205 KKYSINVLGEYN--IGGDAWEMDRVLEKIGYHVNATLTGDATYEKVQNAD-KADLNLVQCHRSINYIAEMMETKYGIPWI 281 (533)
T ss_dssp CTTEEEEEEECC--BTSHHHHHHHHHHHHTCEEEEEEETTCCHHHHHBTT-SCSEEEESCHHHHHHHHHHHHHHHCCCEE
T ss_pred CCCeEEEEcCCC--ChhhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhh-cCCEEEEECHHHHHHHHHHHHHHhCCCeE
Confidence 456777775321 134568999999999999986554 68999998866 678888875 455554555543 77778
Q ss_pred EEeeCCCCccccCcchHhHHhhCCC
Q 037469 336 QVVPFGGFAWLARTDYEEPAKAMKL 360 (429)
Q Consensus 336 Ei~P~g~~~~~~~~~y~~~A~~~Gl 360 (429)
.+.|.| .+- ...+.+.+|+..|.
T Consensus 282 ~~~piG-~~~-T~~~Lr~ia~~~g~ 304 (533)
T 1mio_A 282 KCNFIG-VDG-IVETLRDMAKCFDD 304 (533)
T ss_dssp ECCCSS-HHH-HHHHHHHHHHHSCC
T ss_pred EecCCC-HHH-HHHHHHHHHHHhCC
Confidence 877888 332 24577888888875
No 61
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=24.00 E-value=92 Score=27.00 Aligned_cols=48 Identities=13% Similarity=0.257 Sum_probs=31.5
Q ss_pred CHHHHHHHHHhcCCEEEEeeC-CCC---HHHH-HHH--hccCcEEEEechhhhhh
Q 037469 277 NAEEIAQMGRRLGFNVVVAEA-NGN---LSRF-AET--VNYCDVFLAVHGAAMTN 324 (429)
Q Consensus 277 Ne~ev~~~l~~~Gf~V~v~e~-~~~---~~q~-~~l--~~sadVlVGvHGAGLTN 324 (429)
|-.-+.+.|++.|++|+...- .-+ +.+. ... .+.+|++|.-=|.|.|.
T Consensus 41 ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~~ 95 (178)
T 3iwt_A 41 SGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred hHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccCC
Confidence 446688999999999864332 112 3222 222 24589999999999775
No 62
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=23.43 E-value=1.8e+02 Score=28.31 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=56.3
Q ss_pred CccccCHHHHHHHHHhcCCEEEEeeC------CCCHHHHHH----------HhccCcEEEEechhhhhhhcccCCCcEEE
Q 037469 272 TRAFTNAEEIAQMGRRLGFNVVVAEA------NGNLSRFAE----------TVNYCDVFLAVHGAAMTNMIFLPENAVFI 335 (429)
Q Consensus 272 ~R~i~Ne~ev~~~l~~~Gf~V~v~e~------~~~~~q~~~----------l~~sadVlVGvHGAGLTN~lFl~pga~vI 335 (429)
.||.-=..+-++.|.+.|++|.+ |. ..+=++... .+ +||++|++.----...-.+++|..+|
T Consensus 13 e~Rv~l~P~~v~~L~~~g~~v~v-e~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~vk~p~~~~~~~l~~~~~~~ 90 (369)
T 2eez_A 13 ENRVALTPGGVESLVRRGHTVLV-ERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKVKEPLPEEYGFLREGLILF 90 (369)
T ss_dssp CCCCSSCHHHHHHHHHTTCEEEE-ETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECSSCCCGGGGGGCCTTCEEE
T ss_pred CceeCcCHHHHHHHHhCCCEEEE-eCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEECCCCHHHHhhcCCCcEEE
Confidence 45555556777888889999965 43 122233332 56 79999988755444556678998876
Q ss_pred EEeeCCCCccccCcchHhHHhhCCCeEEEEEeec
Q 037469 336 QVVPFGGFAWLARTDYEEPAKAMKLRYLEYKIKL 369 (429)
Q Consensus 336 Ei~P~g~~~~~~~~~y~~~A~~~Gl~Y~~y~i~~ 369 (429)
=..-.+ .....-+-....|+..++|+...
T Consensus 91 ~~~~~~-----~~~~~~~~l~~~gi~~ia~e~~~ 119 (369)
T 2eez_A 91 TYLHLA-----ADRGLTEAMLRSGVTGIAYETVQ 119 (369)
T ss_dssp ECCCGG-----GCHHHHHHHHHHTCEEEEGGGCC
T ss_pred EEeccc-----CCHHHHHHHHHCCCeEEEeeccc
Confidence 654333 12233344567789988775433
No 63
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=23.35 E-value=78 Score=25.34 Aligned_cols=53 Identities=25% Similarity=0.271 Sum_probs=33.0
Q ss_pred EEEEecCC-CccccCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEE-E--echhhh
Q 037469 264 LLIVSRKR-TRAFTNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFL-A--VHGAAM 322 (429)
Q Consensus 264 lliisR~~-~R~i~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlV-G--vHGAGL 322 (429)
++|-|+.| ++++. +++.+.+++.|+++.+.+. +.+.++ +.++|.+| | +||.|.
T Consensus 4 iiy~S~tGnT~~~a--~~i~~~l~~~g~~v~~~~~~~~~~~~----l~~~d~vi~g~p~y~~~~ 61 (137)
T 2fz5_A 4 IVYWSGTGNTEAMA--NEIEAAVKAAGADVESVRFEDTNVDD----VASKDVILLGCPAMGSEE 61 (137)
T ss_dssp EEECCSSSHHHHHH--HHHHHHHHHTTCCEEEEETTSCCHHH----HHTCSEEEEECCCBTTTB
T ss_pred EEEECCCChHHHHH--HHHHHHHHhCCCeEEEEEcccCCHHH----HhcCCEEEEEccccCCCC
Confidence 55667665 46665 5567777778999888776 445543 34567654 3 455543
No 64
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=22.51 E-value=84 Score=29.79 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=32.8
Q ss_pred ccCcEEEEechhhhhhh------cccCCCcEEEEEeeCCCCccccCcchHhHHhhCCCe
Q 037469 309 NYCDVFLAVHGAAMTNM------IFLPENAVFIQVVPFGGFAWLARTDYEEPAKAMKLR 361 (429)
Q Consensus 309 ~sadVlVGvHGAGLTN~------lFl~pga~vIEi~P~g~~~~~~~~~y~~~A~~~Gl~ 361 (429)
..+|++|..-++|+..- =++++|++|++++-.- ..+.|-..|+..|.+
T Consensus 186 ~~aDiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P-----~~T~ll~~A~~~G~~ 239 (281)
T 3o8q_A 186 QSYDVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGK-----GYTVFNQWARQHGCA 239 (281)
T ss_dssp SCEEEEEECSCCCC----CSCCGGGEEEEEEEEESCCCS-----SCCHHHHHHHHTTCS
T ss_pred CCCCEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCC-----ccCHHHHHHHHCCCC
Confidence 57899998888886432 2456788999986221 145577788989986
No 65
>1xov_A PLY protein, plypsa; alpha/beta hydrolase, multi-domain, hydrolase; 1.80A {Listeria phage psa} SCOP: b.34.11.4 c.56.5.6
Probab=22.38 E-value=55 Score=32.06 Aligned_cols=42 Identities=29% Similarity=0.329 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCEEE-E-eeC--C--CCHHHHHHHhc--cCcEEEEechhh
Q 037469 280 EIAQMGRRLGFNVV-V-AEA--N--GNLSRFAETVN--YCDVFLAVHGAA 321 (429)
Q Consensus 280 ev~~~l~~~Gf~V~-v-~e~--~--~~~~q~~~l~~--sadVlVGvHGAG 321 (429)
+|.+.|++.|++|. + ..- + .++.+-+++.| .||++|++|--+
T Consensus 45 ~l~~~L~~~G~~V~V~m~tR~~D~~~~L~~R~~~An~~~ADlfISIH~Na 94 (326)
T 1xov_A 45 AASDELKREGHNVKTFIDRTSTTQSANLNKIVNWHNANPADVHISVHLNA 94 (326)
T ss_dssp HHHHHHHHTTCEEEEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEEEEEC
T ss_pred HHHHHHHhCCCceEEEEecCCCCccCCHHHHHHHHHhcCCCEEEEEeccC
Confidence 44555666799963 2 222 2 34555445544 489999999655
No 66
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=21.88 E-value=93 Score=28.04 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=36.9
Q ss_pred CCCCeEEEEecCCCccccCHHHHHHHHHhcC--CEEEEeeCCCCHHHHHHHh-----ccCcEEEEech
Q 037469 259 KKKPRLLIVSRKRTRAFTNAEEIAQMGRRLG--FNVVVAEANGNLSRFAETV-----NYCDVFLAVHG 319 (429)
Q Consensus 259 ~~~prlliisR~~~R~i~Ne~ev~~~l~~~G--f~V~v~e~~~~~~q~~~l~-----~sadVlVGvHG 319 (429)
.-+|.+-||.=.. --+--.++..+.|++.| ||+.++..+-+.++...+. +..+|+|+.=|
T Consensus 20 ~mkp~V~IimGS~-SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG 86 (181)
T 4b4k_A 20 HMKSLVGVIMGST-SDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAG 86 (181)
T ss_dssp --CCSEEEEESSG-GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEC
T ss_pred CCCccEEEEECCH-hHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEecc
Confidence 4578777776442 22333467778888886 6888888865554444443 34578888644
No 67
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=21.87 E-value=43 Score=31.66 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=42.1
Q ss_pred CCeEEEEecCCCccccCHHHHHHHHHhcCCEEEEeeCC-C--CHHHHHHHhccCcEEEEec-hh---------hhhhhcc
Q 037469 261 KPRLLIVSRKRTRAFTNAEEIAQMGRRLGFNVVVAEAN-G--NLSRFAETVNYCDVFLAVH-GA---------AMTNMIF 327 (429)
Q Consensus 261 ~prlliisR~~~R~i~Ne~ev~~~l~~~Gf~V~v~e~~-~--~~~q~~~l~~sadVlVGvH-GA---------GLTN~lF 327 (429)
-+|+|||. ++.-=...+.+.++|++.||+|.+++++ . +.+ -++..|++|=.- ++ .|.. |
T Consensus 4 m~~vLiV~--g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~----~L~~yDvIIl~d~~~~~l~~~~~~~L~~--y 75 (259)
T 3rht_A 4 MTRVLYCG--DTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGE----LLAKQDLVILSDYPAERMTAQAIDQLVT--M 75 (259)
T ss_dssp --CEEEEE--SSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSH----HHHTCSEEEEESCCGGGBCHHHHHHHHH--H
T ss_pred CceEEEEC--CCCchhHHHHHHHHHHhCCceEEEecccccccChh----HHhcCCEEEEcCCccccCCHHHHHHHHH--H
Confidence 36888885 3332233466888999999999998872 2 223 245779987653 22 2333 3
Q ss_pred cCCCcEEEEEe
Q 037469 328 LPENAVFIQVV 338 (429)
Q Consensus 328 l~pga~vIEi~ 338 (429)
...|..+|=+-
T Consensus 76 V~~GGgLi~~g 86 (259)
T 3rht_A 76 VKAGCGLVMLG 86 (259)
T ss_dssp HHTTCEEEEEC
T ss_pred HHhCCeEEEec
Confidence 35677777663
No 68
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.36 E-value=2.2e+02 Score=24.47 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=41.9
Q ss_pred CCCeEEEEecCC---CccccCHHHHHHHHHhcCCEEEEeeC--C-C-CH-HHHHHHhc--cCcEEEEechhhhhh
Q 037469 260 KKPRLLIVSRKR---TRAFTNAEEIAQMGRRLGFNVVVAEA--N-G-NL-SRFAETVN--YCDVFLAVHGAAMTN 324 (429)
Q Consensus 260 ~~prlliisR~~---~R~i~Ne~ev~~~l~~~Gf~V~v~e~--~-~-~~-~q~~~l~~--sadVlVGvHGAGLTN 324 (429)
++||+-+|+=.. ...=.|-.-+.+.|++.|+++....- + . .+ +.+....+ .+|++|-.=|.|.+.
T Consensus 12 ~~~rv~Ii~tGdElg~i~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~ 86 (169)
T 1y5e_A 12 KEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITK 86 (169)
T ss_dssp CCCEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSST
T ss_pred cCCEEEEEEEcCccCeeccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC
Confidence 567777766332 22223556788899999998864332 2 1 23 34445565 789999999988764
No 69
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=21.18 E-value=83 Score=30.31 Aligned_cols=78 Identities=12% Similarity=0.175 Sum_probs=48.8
Q ss_pred CCCeEEEEe--cCCCcccc--CHHHHHHHHHhcCCEEEEeeC-----------------------CCCHHHHHHHhccCc
Q 037469 260 KKPRLLIVS--RKRTRAFT--NAEEIAQMGRRLGFNVVVAEA-----------------------NGNLSRFAETVNYCD 312 (429)
Q Consensus 260 ~~prlliis--R~~~R~i~--Ne~ev~~~l~~~Gf~V~v~e~-----------------------~~~~~q~~~l~~sad 312 (429)
.+|.+++.- |...|++- +-.|+++.+.+.|++++++.. .+++.|.+.+++.||
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali~~a~ 263 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAMNRCN 263 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHHHhCC
Confidence 345555432 22345553 557788877666887765321 257889999999999
Q ss_pred EEEEechhhhhhhcccCCCcEEEEEee
Q 037469 313 VFLAVHGAAMTNMIFLPENAVFIQVVP 339 (429)
Q Consensus 313 VlVGvHGAGLTN~lFl~pga~vIEi~P 339 (429)
++||+ -+|..|+--+ -|+-+|-|+-
T Consensus 264 ~~i~~-DsG~~HlAaa-~g~P~v~lfg 288 (349)
T 3tov_A 264 LLITN-DSGPMHVGIS-QGVPIVALYG 288 (349)
T ss_dssp EEEEE-SSHHHHHHHT-TTCCEEEECS
T ss_pred EEEEC-CCCHHHHHHh-cCCCEEEEEC
Confidence 99997 3445555322 3666666663
No 70
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=20.92 E-value=99 Score=30.36 Aligned_cols=64 Identities=16% Similarity=0.154 Sum_probs=40.0
Q ss_pred cCHHHHHHHHHhcCCEEEEeeC-CCCHHHHHHHhccCcEEEEec--hhhhhhhccc-CCCcEEEEEee
Q 037469 276 TNAEEIAQMGRRLGFNVVVAEA-NGNLSRFAETVNYCDVFLAVH--GAAMTNMIFL-PENAVFIQVVP 339 (429)
Q Consensus 276 ~Ne~ev~~~l~~~Gf~V~v~e~-~~~~~q~~~l~~sadVlVGvH--GAGLTN~lFl-~pga~vIEi~P 339 (429)
.++.++.+.+++.|++++.... ..+-+++.+.+..||++|.-. ...++--++- -|+-.+|...-
T Consensus 27 ~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~p~Lk~i~~~g 94 (351)
T 3jtm_A 27 ENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAG 94 (351)
T ss_dssp TTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHCSSCCEEEESS
T ss_pred cchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhCCCCeEEEEeC
Confidence 3456788889999999987664 234457778888999998732 2223333331 23445555433
No 71
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=20.50 E-value=1.1e+02 Score=24.34 Aligned_cols=27 Identities=19% Similarity=0.290 Sum_probs=14.7
Q ss_pred CHHHHHHHhc--cCc-EEEEechhhhhhhc
Q 037469 300 NLSRFAETVN--YCD-VFLAVHGAAMTNMI 326 (429)
Q Consensus 300 ~~~q~~~l~~--sad-VlVGvHGAGLTN~l 326 (429)
+.+++.+..+ .+| |++|-||.|+...+
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~ 123 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIASHRPDITTYL 123 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCS
T ss_pred hHHHHHHHHHHhCCCEEEEeCCCCCCeeee
Confidence 3344444443 455 46788876665543
Done!