Query 037470
Match_columns 445
No_of_seqs 234 out of 1476
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 21:48:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037470.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037470hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 6.8E-88 2.3E-92 681.4 27.6 402 1-445 17-498 (498)
2 3dwl_A Actin-related protein 3 100.0 1.8E-83 6.2E-88 643.9 15.9 385 5-445 3-422 (427)
3 4fo0_A Actin-related protein 8 100.0 4E-77 1.4E-81 627.9 22.0 404 8-445 16-590 (593)
4 2fxu_A Alpha-actin-1, actin, a 100.0 4.9E-75 1.7E-79 578.0 25.4 367 4-445 2-375 (375)
5 1k8k_B ARP2, actin-like protei 100.0 2.1E-75 7.3E-80 583.6 13.5 366 4-442 3-388 (394)
6 1k8k_A ARP3, actin-like protei 100.0 1.2E-70 4.2E-75 554.6 23.4 373 5-445 3-413 (418)
7 4am6_A Actin-like protein ARP8 100.0 5.4E-64 1.8E-68 509.5 23.9 401 5-445 38-652 (655)
8 1jce_A ROD shape-determining p 100.0 1.4E-35 4.8E-40 291.1 12.8 306 8-423 4-330 (344)
9 3h1q_A Ethanolamine utilizatio 99.9 7.4E-23 2.5E-27 193.8 8.9 210 93-417 59-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.9 2.6E-23 9E-28 213.8 6.2 298 8-419 3-350 (509)
11 1dkg_D Molecular chaperone DNA 99.8 4.9E-22 1.7E-26 197.5 7.1 223 125-419 135-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.8 2.3E-21 7.8E-26 193.3 5.0 223 125-419 153-392 (394)
13 3i33_A Heat shock-related 70 k 99.8 1E-19 3.5E-24 182.0 4.5 223 125-419 158-400 (404)
14 2kho_A Heat shock protein 70; 99.7 6.5E-17 2.2E-21 169.2 9.1 217 125-419 135-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.6 3.7E-16 1.3E-20 161.9 10.3 216 126-418 140-378 (554)
16 3d2f_A Heat shock protein homo 99.6 2.6E-15 8.8E-20 158.5 9.1 215 126-418 139-381 (675)
17 4gni_A Putative heat shock pro 99.6 6.2E-16 2.1E-20 154.7 2.9 249 105-421 129-402 (409)
18 2fsj_A Hypothetical protein TA 99.5 1E-14 3.6E-19 142.3 7.2 193 8-225 22-240 (346)
19 2ych_A Competence protein PILM 99.5 1.9E-13 6.4E-18 135.2 13.8 168 142-385 154-331 (377)
20 4b9q_A Chaperone protein DNAK; 99.4 9.3E-13 3.2E-17 137.7 11.9 237 106-418 115-380 (605)
21 4a2a_A Cell division protein F 99.4 1E-12 3.5E-17 131.1 10.2 186 159-419 182-393 (419)
22 3js6_A Uncharacterized PARM pr 99.0 1.4E-10 4.7E-15 113.2 5.3 201 8-225 5-232 (355)
23 2zgy_A Plasmid segregation pro 98.9 1.4E-09 4.9E-14 104.7 8.7 67 159-225 140-213 (320)
24 4apw_A ALP12; actin-like prote 98.9 8.6E-10 2.9E-14 106.6 5.6 192 7-224 7-219 (329)
25 2d0o_A DIOL dehydratase-reacti 98.2 1.1E-06 3.9E-11 87.3 6.5 57 165-223 390-451 (610)
26 1nbw_A Glycerol dehydratase re 98.2 1.3E-06 4.3E-11 87.3 6.1 57 165-223 392-453 (607)
27 3cet_A Conserved archaeal prot 90.4 0.2 6.9E-06 47.2 4.0 25 177-201 127-151 (334)
28 4ehu_A Activator of 2-hydroxyi 90.3 0.024 8.3E-07 52.5 -2.3 66 340-418 188-253 (276)
29 1t6c_A Exopolyphosphatase; alp 89.0 0.56 1.9E-05 44.2 6.0 41 176-218 137-177 (315)
30 3mdq_A Exopolyphosphatase; str 86.2 0.78 2.7E-05 43.2 5.2 41 176-218 130-170 (315)
31 3cer_A Possible exopolyphospha 84.8 0.78 2.7E-05 43.8 4.5 42 177-218 146-191 (343)
32 2i7n_A Pantothenate kinase 1; 84.6 0.53 1.8E-05 45.0 3.2 73 339-416 283-357 (360)
33 3djc_A Type III pantothenate k 79.6 5 0.00017 36.6 7.6 19 9-27 4-22 (266)
34 1u6z_A Exopolyphosphatase; alp 79.0 2.8 9.6E-05 42.2 6.3 39 178-218 138-176 (513)
35 3hi0_A Putative exopolyphospha 78.8 3.1 0.00011 41.8 6.6 40 176-217 139-178 (508)
36 2ews_A Pantothenate kinase; PA 72.3 0.57 1.9E-05 43.4 -0.9 48 362-417 238-286 (287)
37 3aap_A Ectonucleoside triphosp 61.8 6.3 0.00022 37.5 4.1 35 177-211 140-176 (353)
38 2h3g_X Biosynthetic protein; p 60.6 22 0.00074 32.3 7.3 18 10-27 3-20 (268)
39 1hux_A Activator of (R)-2-hydr 47.1 1.5 5.1E-05 40.2 -3.0 47 362-419 210-256 (270)
40 2qm1_A Glucokinase; alpha-beta 43.5 1E+02 0.0035 28.1 9.3 49 145-202 104-159 (326)
41 3vgl_A Glucokinase; ROK family 43.4 1.2E+02 0.0042 27.7 9.8 124 9-201 4-146 (321)
42 1zc6_A Probable N-acetylglucos 40.3 1.6E+02 0.0056 26.6 10.1 87 104-200 53-145 (305)
43 4db3_A Glcnac kinase, N-acetyl 37.6 7.5 0.00026 36.4 0.2 49 145-202 116-171 (327)
44 1zbs_A Hypothetical protein PG 34.6 2.2E+02 0.0075 25.5 9.9 66 127-200 62-132 (291)
45 2gup_A ROK family protein; sug 33.3 3.5 0.00012 37.9 -2.8 47 147-202 92-143 (292)
46 2aa4_A Mannac kinase, putative 30.9 4 0.00014 37.4 -2.9 47 146-202 93-146 (289)
47 3r8e_A Hypothetical sugar kina 30.4 6.6 0.00023 36.7 -1.5 49 145-202 113-169 (321)
48 2hoe_A N-acetylglucosamine kin 29.5 11 0.00037 36.1 -0.1 49 145-202 184-237 (380)
49 2qm1_A Glucokinase; alpha-beta 29.0 6.7 0.00023 36.5 -1.7 68 340-417 249-319 (326)
50 3vov_A Glucokinase, hexokinase 28.6 7.1 0.00024 36.1 -1.6 49 145-202 94-149 (302)
51 3qbx_A Anhydro-N-acetylmuramic 27.9 19 0.00064 34.4 1.2 24 362-385 285-308 (371)
52 4htl_A Beta-glucoside kinase; 27.4 38 0.0013 30.9 3.2 65 341-417 225-289 (297)
53 3cj1_A Ectonucleoside triphosp 24.2 52 0.0018 32.3 3.7 22 177-198 190-211 (456)
54 3djc_A Type III pantothenate k 24.0 1.2E+02 0.004 27.3 5.8 49 179-227 4-53 (266)
55 2ivn_A O-sialoglycoprotein end 23.7 32 0.0011 32.1 2.0 27 361-387 245-271 (330)
56 3eno_A Putative O-sialoglycopr 21.9 43 0.0015 31.4 2.5 27 361-387 250-276 (334)
57 3cqy_A Anhydro-N-acetylmuramic 21.3 29 0.00098 33.1 1.1 23 362-384 291-313 (370)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-88 Score=681.36 Aligned_cols=402 Identities=33% Similarity=0.579 Sum_probs=345.5
Q ss_pred CCCCCCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEecc
Q 037470 1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGT 80 (445)
Q Consensus 1 ~y~~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 80 (445)
|||+|+..+||||+||++|||||+|++.|++++||+||+++.. ..++.++|+
T Consensus 17 ~yggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~----------------------------~~~~~~vG~ 68 (498)
T 3qb0_A 17 VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTAD----------------------------EGNKKIFSE 68 (498)
T ss_dssp --CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSC----------------------------SSCCEECCT
T ss_pred ccCCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccC----------------------------CCccEEEec
Confidence 6999999999999999999999999999999999999998642 125789999
Q ss_pred ccccCcCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCCCCCC-cEEEecCCCCCHHHHHHHhc---cccCccCCee
Q 037470 81 QSLGFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLIDPKEH-PMLLAEPSSNTQQQRESSAF---SFWVCVCGIL 156 (445)
Q Consensus 81 ~~~~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~~~~~-~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~ 156 (445)
++....++.+.+++|+++|+|.|||++|.+|+|+|++.|++++.++ ||||+||++++...|++++| |.|+
T Consensus 69 e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~------ 142 (498)
T 3qb0_A 69 QSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQ------ 142 (498)
T ss_dssp TGGGSCCTTEEEEESEETTEESCHHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSC------
T ss_pred HHHhcCcCceEEeccCcCCEEccHHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcC------
Confidence 8655567889999999999999999999999999988999999999 99999999999999999999 9999
Q ss_pred eccceE-EechhhhhhhccCCceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCcccc
Q 037470 157 VFCPVI-EFDALVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSF 235 (445)
Q Consensus 157 ~~~p~v-~~~~~~la~~~~g~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~ 235 (445)
+|++ ++.+++|++|++|+++|||||+|++.|+|+||++|+++.++++++++||++||++|.++|++++ +.|.|.+
T Consensus 143 --vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~--i~P~~~i 218 (498)
T 3qb0_A 143 --FEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKE--IIPLFAI 218 (498)
T ss_dssp --CSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSC--CCCSTTE
T ss_pred --CCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhcc--ccchhhh
Confidence 9999 9999999999999999999999999999999999999999999999999999999999998765 3466666
Q ss_pred ccccCCCCCcceeccCCCCCchhHHhHh-HHHHHHHHhhcceecCCC-cCCcc--ccCCCCCceeECCCCceEeeCcc-c
Q 037470 236 KRKENRPGEFQIVDLDFPNTTESYKLYC-QRVIASDIKECVCRAPDT-PYDES--AYSNIPMTPYELPDGQVIEIGAD-R 310 (445)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~iKe~~~~v~~~-~~~~~--~~~~~~~~~~~lpdg~~i~l~~e-r 310 (445)
+++.- .+.....++ +.+.||..+. .++++++|||++|+|+.+ .++.. ...+...+.|+||||+.|.++.| |
T Consensus 219 ~~k~~---~~~~~~~~~-~~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~~~~~~yeLPDG~~i~lg~E~R 294 (498)
T 3qb0_A 219 KQRKP---EFIKKTFDY-EVDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETR 294 (498)
T ss_dssp EECSS---SCEECCCSS-CCCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHTCCCEEEECSSSCEEEECHHHH
T ss_pred ccccc---ccccccCCC-ccCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccCcCceEEECCCCCEEEECchHh
Confidence 55421 011111111 2456777776 566999999999999975 23322 12345678999999999999999 9
Q ss_pred ccccccccCCCCCCCCC-------CC-----CCc-----------------------------c----------------
Q 037470 311 FKTPDVLFNPSLVQTIP-------GM-----ENF-----------------------------A---------------- 333 (445)
Q Consensus 311 ~~~~E~lF~p~~~~~~~-------~~-----~~~-----------------------------~---------------- 333 (445)
|++||+||+|++++... |. +.| +
T Consensus 295 f~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (498)
T 3qb0_A 295 YGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNET 374 (498)
T ss_dssp HHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC---------------------------------------
T ss_pred hhCchhhCCHhHcCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999874300 00 000 0
Q ss_pred ------------CCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCC
Q 037470 334 ------------ENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGN 401 (445)
Q Consensus 334 ------------~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~ 401 (445)
...+..||+++|.++|++||+|+|+.|++||||+||+|++|||.+||++||+.++| .++++|+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~ 453 (498)
T 3qb0_A 375 GKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGH 453 (498)
T ss_dssp --------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSC
T ss_pred ccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCC
Confidence 00156899999999999999999999999999999999999999999999999999 88999998655
Q ss_pred CCCccceeEeeeEEeecccccccccccHHHHHHcCc-hhhhhcCC
Q 037470 402 ATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGA-SYIQRKCP 445 (445)
Q Consensus 402 ~~~~~~~~W~Gasilasl~~f~~~~itr~eY~E~G~-~~~~~k~~ 445 (445)
+.+|.+++|+||||||+|++|+++||||+||+|+|+ .+|+|||+
T Consensus 454 ~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc~ 498 (498)
T 3qb0_A 454 TIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRFR 498 (498)
T ss_dssp TGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTTC
T ss_pred CCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccCc
Confidence 579999999999999999999999999999999999 89999996
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-83 Score=643.85 Aligned_cols=385 Identities=28% Similarity=0.475 Sum_probs=308.8
Q ss_pred CCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCccccc--ccccCCCccccCCCccCCcCCCCCcceEecccc
Q 037470 5 DEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSA--NAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQS 82 (445)
Q Consensus 5 ~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 82 (445)
.+..+||||+||+++|+||||++.|+++|||+||+++........ ...+. ...+++. .+....+...++++||++|
T Consensus 3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~vG~ea 80 (427)
T 3dwl_A 3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSY-MASKGSG-HLSSKRATEDLDFFIGNDA 80 (427)
T ss_dssp CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC--------------------------------CCSSCCEETHHH
T ss_pred CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccc-ccccccc-ccccccCcccCCeEEchHH
Confidence 356799999999999999999999999999999998743100000 00000 0000000 0000012234588999998
Q ss_pred ccCcCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCCCCCCcEEEecCCCCCHHHHHHHhc---cccCccCCeeecc
Q 037470 83 LGFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFC 159 (445)
Q Consensus 83 ~~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~~~~~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~ 159 (445)
.......+++++|+++|+|.|||.+|.+|+|+|++.|++++.++||+||||+++++..|++++| |+|+ +
T Consensus 81 ~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~--------~ 152 (427)
T 3dwl_A 81 LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFN--------C 152 (427)
T ss_dssp HHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTC--------C
T ss_pred hhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhcc--------C
Confidence 7655447889999999999999999999999999999999999999999999999999999999 9999 9
Q ss_pred ceE-EechhhhhhhccC--------CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCccc
Q 037470 160 PVI-EFDALVLTSFALG--------RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIK 230 (445)
Q Consensus 160 p~v-~~~~~~la~~~~g--------~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~ 230 (445)
|++ ++.+++||+|++| .+||||||+|++.|+|+||++|+++.++++++++||+++|++|.++|++++..
T Consensus 153 p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~-- 230 (427)
T 3dwl_A 153 AGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP-- 230 (427)
T ss_dssp SEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-------
T ss_pred ceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC--
Confidence 999 9999999999998 68999999999999999999999999999999999999999999999887632
Q ss_pred CccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCcccc---CCCCCceeEC--CCCc--e
Q 037470 231 PRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAY---SNIPMTPYEL--PDGQ--V 303 (445)
Q Consensus 231 p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~---~~~~~~~~~l--pdg~--~ 303 (445)
....+++++|||++|||+.+...+... .....+.|.+ |||. .
T Consensus 231 -------------------------------~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~ 279 (427)
T 3dwl_A 231 -------------------------------DSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTT 279 (427)
T ss_dssp ----------------------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------
T ss_pred -------------------------------chhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeE
Confidence 134578999999999998764332111 0112456778 8987 8
Q ss_pred EeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHH
Q 037470 304 IEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKD 383 (445)
Q Consensus 304 i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~e 383 (445)
+.++.|||++||+||+|++++. + ...+|+++|.++|++||+|+|++|++|||||||+|++|||.+||++|
T Consensus 280 i~ig~erf~~pE~LF~P~~~g~----~------~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~E 349 (427)
T 3dwl_A 280 IDVGFERFLAPEIFFNPEIASS----D------FLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRD 349 (427)
T ss_dssp CBCCTHHHHSGGGGTCGGGTCS----S------CCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHH
T ss_pred EEEChHhhhChhhccCchhcCC----c------cCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHH
Confidence 9999999999999999998854 1 03699999999999999999999999999999999999999999999
Q ss_pred HhhhC--------------CCCceEEEEecCCCCCccceeEeeeEEeecccccccccccHHHHHHcCchhhhhcCC
Q 037470 384 LLEES--------------PQAARVKVVSSGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445 (445)
Q Consensus 384 L~~~~--------------p~~~~v~v~~~~~~~~~~~~~W~Gasilasl~~f~~~~itr~eY~E~G~~~~~~k~~ 445 (445)
|+.++ |..++++|++ +++|+|++|+||||||++++|+++||||+||+|+|++++|||++
T Consensus 350 l~~l~~~~~~~~~~~~~~~p~~~~vkv~~---~~~r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 350 LKRIVDERIHRSEMLSGAKSGGVDVNVIS---HKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHHHHTTC-------------CCCCCEEC---CTTCTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred HHHhhhhhccccccccccCCCceeEEEec---CCccccceecCceeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99987 5567899998 57899999999999999999999999999999999999999874
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-77 Score=627.90 Aligned_cols=404 Identities=20% Similarity=0.303 Sum_probs=296.5
Q ss_pred CcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccc-----------------------------------
Q 037470 8 SAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAE----------------------------------- 52 (445)
Q Consensus 8 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~----------------------------------- 52 (445)
.+||||+||+++|||||||+.|+. +|++||+++...........
T Consensus 16 ~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (593)
T 4fo0_A 16 FIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSNG 94 (593)
T ss_dssp GEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTTS
T ss_pred CEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhcc
Confidence 479999999999999999999985 69999998653211000000
Q ss_pred --cCCCc--cccCCCc------------cCCcCCCCCcceEeccccccC-cCCCeEEeccCCCC-----------eecCH
Q 037470 53 --RNSGS--AIDSKNN------------VDSNKGKGKRKLYVGTQSLGF-RRDHMEVLSPLKDG-----------VVVDW 104 (445)
Q Consensus 53 --~~~~~--~~~~~~~------------~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~P~~~g-----------~i~d~ 104 (445)
...++ ...++|. .........+++++|++|+.. +++.+.++|||++| ++.||
T Consensus 95 ~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~w 174 (593)
T 4fo0_A 95 TRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAVL 174 (593)
T ss_dssp CCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHHH
T ss_pred cccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcCH
Confidence 00000 0000010 000001234679999999754 46779999999999 57899
Q ss_pred HHHHHHHHHHhccccCCCCCC---CcEEEecCCCCCHHHHHHHhc---cccCccCCeeeccceE-EechhhhhhhccCCc
Q 037470 105 DIVDSIWDHAFRECLLIDPKE---HPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFCPVI-EFDALVLTSFALGRA 177 (445)
Q Consensus 105 d~~e~i~~~~~~~~L~~~~~~---~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~~ 177 (445)
|+||.||+|+|+++|++++++ |||||+||+++++..|++++| |+|+ ||++ ++++++||+||+|++
T Consensus 175 dd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~--------~pa~~~~~~~vla~ya~G~~ 246 (593)
T 4fo0_A 175 ADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMG--------FSGIVVHQESVCATYGSGLS 246 (593)
T ss_dssp HHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTC--------CSEEEEEEHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcC--------CCeEEeechHHHHHHHCCCC
Confidence 999999999999999998876 999999999999999999999 9999 9999 999999999999999
Q ss_pred eEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCcceeccCCCCCch
Q 037470 178 TSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIVDLDFPNTTE 257 (445)
Q Consensus 178 tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (445)
||||||+|++.|+|+||+||+++.++++++++||++||++|.++|..+++.+.+...
T Consensus 247 tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~----------------------- 303 (593)
T 4fo0_A 247 STCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQL----------------------- 303 (593)
T ss_dssp EEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCT-----------------------
T ss_pred ceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCcccccc-----------------------
Confidence 999999999999999999999999999999999999999999999999866532211
Q ss_pred hHHhHhHHHHHHHHhhcceecCCCcCCccc--------------------------------------------------
Q 037470 258 SYKLYCQRVIASDIKECVCRAPDTPYDESA-------------------------------------------------- 287 (445)
Q Consensus 258 s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~-------------------------------------------------- 287 (445)
....+++++++|||++|+++.+...+..
T Consensus 304 --~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~ 381 (593)
T 4fo0_A 304 --TNKMDCLLLQHLKETFCHLDQDISGLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRS 381 (593)
T ss_dssp --TCHHHHHHHHHHHHHHCBCCTTCCSCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC--
T ss_pred --ccchhHHHHHHHHHHhcccccchHHhhhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhc
Confidence 1134678999999999999875432110
Q ss_pred ------------------------cCCCCCceeECCCCceEeeCcccccccccccCCCCCCCCCCCCC-------c--c-
Q 037470 288 ------------------------YSNIPMTPYELPDGQVIEIGADRFKTPDVLFNPSLVQTIPGMEN-------F--A- 333 (445)
Q Consensus 288 ------------------------~~~~~~~~~~lpdg~~i~l~~er~~~~E~lF~p~~~~~~~~~~~-------~--~- 333 (445)
........+.+|+|..+.++.+|+.+||.||+|.........+. . .
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~ 461 (593)
T 4fo0_A 382 QGDPEDPHDEHYLLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALT 461 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCcccchhhhhhhhcccchhhhhhcccccccccCCCCcccccccccccCchhccCcccccccccccccccccccccccc
Confidence 00112345778899999999999999999999875422000000 0 0
Q ss_pred -----------CCCCCCCHHHHHHHHHHhCC-HHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCc-----eEEE
Q 037470 334 -----------ENIPFRGLPQMVIDSINKCD-VDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAA-----RVKV 396 (445)
Q Consensus 334 -----------~~~~~~~L~~~I~~~i~~~~-~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~-----~v~v 396 (445)
...+..||+++|.++|.+|+ .|+|+.|++|||||||+|++|||.+||++||+.++|..+ +++|
T Consensus 462 ~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v 541 (593)
T 4fo0_A 462 ALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDV 541 (593)
T ss_dssp ---------CHHHHSCCCHHHHHHHHHHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEE
T ss_pred cccccccccccccccCCCHHHHHHHHHHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEE
Confidence 00125699999999999998 699999999999999999999999999999999998643 5899
Q ss_pred EecCCCCCccceeEeeeEEeecccccccccccHHHHHHcCchhhhhcCC
Q 037470 397 VSSGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445 (445)
Q Consensus 397 ~~~~~~~~~~~~~W~Gasilasl~~f~~~~itr~eY~E~G~~~~~~k~~ 445 (445)
+++++..+|++++|+||||||+|++|+++||||+||+|+|+++|+||||
T Consensus 542 ~~~p~~~d~~~~aW~GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 542 ITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp ESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCS
T ss_pred ECCCCCCCCceeeehhhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCC
Confidence 9976667999999999999999999999999999999999999999997
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=4.9e-75 Score=578.01 Aligned_cols=367 Identities=40% Similarity=0.724 Sum_probs=320.2
Q ss_pred CCCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEeccccc
Q 037470 4 GDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSL 83 (445)
Q Consensus 4 ~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 83 (445)
.|+..+||||+||+++|+||+|++.|++++||++++++..... . +...+.+++|++|.
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~--~--------------------~~~~~~~~vG~~a~ 59 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVM--V--------------------GMGQKDSYVGDEAQ 59 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-----------------------------CCEEHHHHH
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccc--c--------------------CCCCCCeEechhHh
Confidence 4678899999999999999999999999999999988643100 0 01225789999876
Q ss_pred cCcCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCCCCCCcEEEecCCCCCHHHHHHHhc---cccCccCCeeeccc
Q 037470 84 GFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFCP 160 (445)
Q Consensus 84 ~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~~~~~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~p 160 (445)
.. ++.+.+.+|+++|+|.|||.+|.+|+|+|++.|++++.+++++|++|++++..+|+++++ |.|+ +|
T Consensus 60 ~~-~~~~~~~~Pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g--------~~ 130 (375)
T 2fxu_A 60 SK-RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN--------VP 130 (375)
T ss_dssp HH-TTSEEEECSEETTEECCHHHHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTC--------CS
T ss_pred hc-CcccceeccccCCcccCHHHHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcC--------cc
Confidence 53 567899999999999999999999999998899999999999999999999999999998 9999 99
Q ss_pred eE-EechhhhhhhccCCceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCcccccccc
Q 037470 161 VI-EFDALVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKE 239 (445)
Q Consensus 161 ~v-~~~~~~la~~~~g~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~ 239 (445)
++ ++++++||+|++|+++++|||+|+++|+|+||++|+++.++..++++||+++|++|.++|.+++..+.+
T Consensus 131 ~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~-------- 202 (375)
T 2fxu_A 131 AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT-------- 202 (375)
T ss_dssp EEEEEEHHHHHHHHTTCSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCS--------
T ss_pred eEEEccchheeeeecCCCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCc--------
Confidence 99 999999999999999999999999999999999999999999999999999999999999987643311
Q ss_pred CCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccc---cCCCCCceeECCCCceEeeCccccccccc
Q 037470 240 NRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESA---YSNIPMTPYELPDGQVIEIGADRFKTPDV 316 (445)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~---~~~~~~~~~~lpdg~~i~l~~er~~~~E~ 316 (445)
....+.+++||+++|+++.+...+.. ..+.....|+||||+.+.++.|||.+||.
T Consensus 203 ----------------------~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E~ 260 (375)
T 2fxu_A 203 ----------------------TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPET 260 (375)
T ss_dssp ----------------------HHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSCEEEESTHHHHHHHT
T ss_pred ----------------------HHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCCCCEEEEChhheechHh
Confidence 23567899999999999754322211 12334578999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEE
Q 037470 317 LFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKV 396 (445)
Q Consensus 317 lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v 396 (445)
||+|.+++. + ..+|+++|.++|++||+++|++|++|||||||+|++|||.+||++||..+.|...+++|
T Consensus 261 lf~p~~~~~----~-------~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v 329 (375)
T 2fxu_A 261 LFQPSFIGM----E-------SAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKI 329 (375)
T ss_dssp TTCGGGGTC----C-------SCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCE
T ss_pred hCCCccCCC----C-------CCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEE
Confidence 999998753 2 67999999999999999999999999999999999999999999999999998888898
Q ss_pred EecCCCCCccceeEeeeEEeecccccccccccHHHHHHcCchhhhhcCC
Q 037470 397 VSSGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445 (445)
Q Consensus 397 ~~~~~~~~~~~~~W~Gasilasl~~f~~~~itr~eY~E~G~~~~~~k~~ 445 (445)
+. +.+|.+++|+|||++|++++|+++||||+||+|+|+++++|||+
T Consensus 330 ~~---~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 330 IA---PPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp EC---CTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred Ec---CCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 87 57899999999999999999999999999999999999999996
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.1e-75 Score=583.62 Aligned_cols=366 Identities=29% Similarity=0.537 Sum_probs=152.5
Q ss_pred CCCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEeccccc
Q 037470 4 GDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSL 83 (445)
Q Consensus 4 ~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 83 (445)
..+..+||||+||+++|+||+|++.|++++||++++++..... ..+ +...+++++|++|.
T Consensus 3 ~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~-------------------~~~-~~~~~~~~vG~ea~ 62 (394)
T 1k8k_B 3 SQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTT-------------------KVG-NIEIKDLMVGDEAS 62 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccc-------------------ccc-CCCCCCeEEChHHH
Confidence 3456799999999999999999999999999999987643100 000 00225789999876
Q ss_pred cCcCCCeEEeccCCCCeecCHHHHHHHHHHHh-ccccCCCCCCCcEEEecCCCCCHHHHHHHhc---cccCccCCeeecc
Q 037470 84 GFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAF-RECLLIDPKEHPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFC 159 (445)
Q Consensus 84 ~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~-~~~L~~~~~~~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~ 159 (445)
.. ++.+.+.+|+++|+|.|||.++.+|+|+| ++.|++++.++||+|++|++++...|+++++ |.|+ +
T Consensus 63 ~~-~~~~~~~~Pi~~G~i~dwd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~--------~ 133 (394)
T 1k8k_B 63 EL-RSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQ--------F 133 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hc-CCCceeeccccCCEEecHHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccC--------C
Confidence 53 56788999999999999999999999999 8999999999999999999999999999999 9999 9
Q ss_pred ceE-EechhhhhhhccCCceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCccccccc
Q 037470 160 PVI-EFDALVLTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRK 238 (445)
Q Consensus 160 p~v-~~~~~~la~~~~g~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~ 238 (445)
|++ ++++++||+|++|+++|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.++++.+.+
T Consensus 134 ~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~------- 206 (394)
T 1k8k_B 134 SGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNH------- 206 (394)
T ss_dssp --------------------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCT-------
T ss_pred CeEEEEhhHHHHHHhCCCceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCc-------
Confidence 999 999999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred cCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccc---cCCCCCceeECCCCceEeeCcccccccc
Q 037470 239 ENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESA---YSNIPMTPYELPDGQVIEIGADRFKTPD 315 (445)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~---~~~~~~~~~~lpdg~~i~l~~er~~~~E 315 (445)
....+.+++||+++|+++.+...+.. ..+.....|+||||+.+.++.|||.+||
T Consensus 207 -----------------------~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~erf~~~E 263 (394)
T 1k8k_B 207 -----------------------SADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPE 263 (394)
T ss_dssp -----------------------TTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTTSCEEEECTHHHHTGG
T ss_pred -----------------------HHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECCCCCEEEECchhhcChH
Confidence 13457899999999999764322211 1233456799999999999999999999
Q ss_pred cccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhC-------
Q 037470 316 VLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEES------- 388 (445)
Q Consensus 316 ~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~------- 388 (445)
+||+|++++. + ..+|+++|.++|.+||+|+|++|++|||||||+|++|||.+||++||..++
T Consensus 264 ~Lf~p~~~~~----~-------~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~ 332 (394)
T 1k8k_B 264 ALFQPHLINV----E-------GVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKG 332 (394)
T ss_dssp GGTCGGGGTC----C-------SCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSS
T ss_pred hhCCchhccC----C-------CCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhccc
Confidence 9999998753 2 679999999999999999999999999999999999999999999999988
Q ss_pred ----CCCceEEEEecCCCCCccceeEeeeEEeecccccc-cccccHHHHHHcCchhhhh
Q 037470 389 ----PQAARVKVVSSGNATERRFSVWIGGSILASLGSFQ-QMWFSKSEYEEHGASYIQR 442 (445)
Q Consensus 389 ----p~~~~v~v~~~~~~~~~~~~~W~Gasilasl~~f~-~~~itr~eY~E~G~~~~~~ 442 (445)
|..++++|+. +++|.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 333 ~~~~p~~~~v~v~~---~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 333 DVEKLSKFKIRIED---PPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp CCCTTCCCCC-------------------------------------------------
T ss_pred ccCCCCceEEEEec---CCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 8778899887 5688999999999999999999 9999999999999999987
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=1.2e-70 Score=554.59 Aligned_cols=373 Identities=28% Similarity=0.489 Sum_probs=316.3
Q ss_pred CCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEecccccc
Q 037470 5 DEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLG 84 (445)
Q Consensus 5 ~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 84 (445)
.+..+||||+||+++|+||+|++.|++++||++++++.... +. .+......+....++++|++|..
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~----~~----------~~~~~~~~~~~~~~~~vG~~a~~ 68 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKV----GD----------QAQRRVMKGVDDLDFFIGDEAIE 68 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-------------------------CCCTTGGGCEEEGGGGTS
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccc----cc----------cccccccccccccCeEEChHHHh
Confidence 45678999999999999999999999999999998764310 00 00000000011236899999876
Q ss_pred CcCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCCCCCCcEEEecCCCCCHHHHHHHhc---cccCccCCeeeccce
Q 037470 85 FRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFCPV 161 (445)
Q Consensus 85 ~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~~~~~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~p~ 161 (445)
.+ ++.+.+|+++|+|.|||.++.+|+|+|++.|++++++++++|++|++++..+|+++.+ |.++ +|+
T Consensus 69 ~~--~~~~~~pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g--------~~~ 138 (418)
T 1k8k_A 69 KP--TYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFN--------VPG 138 (418)
T ss_dssp CT--TSEEECCEETTEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSC--------CSE
T ss_pred cC--CCEEeccccCCEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcC--------CCE
Confidence 53 5899999999999999999999999998889999999999999999999999999999 9999 999
Q ss_pred E-Eechhhhhhhc---------cCCceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccC
Q 037470 162 I-EFDALVLTSFA---------LGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKP 231 (445)
Q Consensus 162 v-~~~~~~la~~~---------~g~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p 231 (445)
+ ++++|+||+|+ .+. +|+|||+|+++|+|+||++|+++.+++.++++||+++|++|.++|.+++..+.+
T Consensus 139 ~~l~~ep~aa~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~ 217 (418)
T 1k8k_A 139 LYIAVQAVLALAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPP 217 (418)
T ss_dssp EEEEEHHHHHHHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCG
T ss_pred EEEechHHHHhhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCC
Confidence 9 99999999999 566 999999999999999999999999999999999999999999999987743311
Q ss_pred ccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccc----cCCCCCceeECCCCc-----
Q 037470 232 RYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESA----YSNIPMTPYELPDGQ----- 302 (445)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~----~~~~~~~~~~lpdg~----- 302 (445)
....+.++++|+++|++..+...+.. ........|.+||+.
T Consensus 218 ------------------------------~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~ 267 (418)
T 1k8k_A 218 ------------------------------EQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEF 267 (418)
T ss_dssp ------------------------------GGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEE
T ss_pred ------------------------------HHHHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCccc
Confidence 13557899999999999864322210 011123579999998
Q ss_pred eEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHH
Q 037470 303 VIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEK 382 (445)
Q Consensus 303 ~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~ 382 (445)
.+.++.|||.+||+||+|.+.+. + ...+|+++|.++|++||+++|+.+++|||||||+|++|||.+||++
T Consensus 268 ~i~l~~erf~~~E~lF~P~~~~~----~------~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~ 337 (418)
T 1k8k_A 268 SIDVGYERFLGPEIFFHPEFANP----D------FTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQR 337 (418)
T ss_dssp EEEECTHHHHHHHTTTCGGGTCT----T------CCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHH
T ss_pred EEEeChHHhhCcHhhCCCccCCC----C------CCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHH
Confidence 89999999999999999998753 1 0368999999999999999999999999999999999999999999
Q ss_pred HHhhhC----------------CCCceEEEEecCCCCCccceeEeeeEEeecccccccccccHHHHHHcCchhhhhcCC
Q 037470 383 DLLEES----------------PQAARVKVVSSGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445 (445)
Q Consensus 383 eL~~~~----------------p~~~~v~v~~~~~~~~~~~~~W~Gasilasl~~f~~~~itr~eY~E~G~~~~~~k~~ 445 (445)
||..++ |..++++|+. +++|.+++|+||||+|++++|+++||||+||+|+|+++++|||.
T Consensus 338 el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~---~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 338 DLKRTVDARLKLSEELSGGRLKPKPIDVQVIT---HHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPV 413 (418)
T ss_dssp HHHHHHHHHHHHHHHHC----CCCCCCCCEEC---CTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHHHCGGGGGCCCC
T ss_pred HHHHhhccccccccccccccCCCCceeEEEeC---CCccccceeHhHHHHHcCccHhheEEEHHHHhhhCHHHHhhhcc
Confidence 999886 6677889888 56899999999999999999999999999999999999999874
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=5.4e-64 Score=509.51 Aligned_cols=401 Identities=20% Similarity=0.335 Sum_probs=311.9
Q ss_pred CCCCcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCccc--cc-ccc-----------------------------
Q 037470 5 DEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDD--SA-NAE----------------------------- 52 (445)
Q Consensus 5 ~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~--~~-~~~----------------------------- 52 (445)
|...+|||++||.++|+|+|.|..|.. +|++|+++....... .. ...
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~~-ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPVV-VPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCEE-EESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCcc-cceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 445689999999999999999999995 999999875421100 00 000
Q ss_pred --c--CCCccccCCCccC----C----cC---CC--CCcceEeccccccCcCCCeEEeccCCCCeec----C-------H
Q 037470 53 --R--NSGSAIDSKNNVD----S----NK---GK--GKRKLYVGTQSLGFRRDHMEVLSPLKDGVVV----D-------W 104 (445)
Q Consensus 53 --~--~~~~~~~~~~~~~----~----~~---~~--~~~~~~~G~~~~~~~~~~~~~~~P~~~g~i~----d-------~ 104 (445)
. +.-....++|... + ++ ++ ..++++||++|....++.+.+++|+++|+|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 0 0011233344211 0 11 11 1258899999886567889999999999998 8 9
Q ss_pred HHHHHHHHHHhcc-ccCCCCC---CCcEEEecCCCCCHHHHHHHhc---cccCccCCeeeccceE-EechhhhhhhccC-
Q 037470 105 DIVDSIWDHAFRE-CLLIDPK---EHPMLLAEPSSNTQQQRESSAF---SFWVCVCGILVFCPVI-EFDALVLTSFALG- 175 (445)
Q Consensus 105 d~~e~i~~~~~~~-~L~~~~~---~~~vll~ep~~~~~~~r~~~~e---E~~~~~~~~~~~~p~v-~~~~~~la~~~~g- 175 (445)
|.+|.+|+|+|++ .|+++++ ++|||||||+++++..|++++| |.|+ +|++ ++.+++||+||+|
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fg--------vpavyl~~qavlAlyasGl 268 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQ--------FQAVAIIQESLATCYGAGI 268 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSC--------CSEEEEEEHHHHHHHHSCC
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcC--------CCeeeeccHHHHHHHhCCC
Confidence 9999999999974 9999986 8999999999999999999999 9999 9999 9999999999999
Q ss_pred CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCcceeccCCCCC
Q 037470 176 RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIVDLDFPNT 255 (445)
Q Consensus 176 ~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 255 (445)
.++|||||+|++.|+|+||++|+++.++++++++||+++|++|.++|.++++... .+.|
T Consensus 269 ~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~-~~~f-------------------- 327 (655)
T 4am6_A 269 STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQ-DWKI-------------------- 327 (655)
T ss_dssp SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCC-SCCT--------------------
T ss_pred CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCcc-ccCC--------------------
Confidence 6999999999999999999999999999999999999999999999999885321 0111
Q ss_pred chhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCcee--ECCCC----ceEeeCcccccccccccCCCCCCCC---
Q 037470 256 TESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPY--ELPDG----QVIEIGADRFKTPDVLFNPSLVQTI--- 326 (445)
Q Consensus 256 ~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~--~lpdg----~~i~l~~er~~~~E~lF~p~~~~~~--- 326 (445)
......+++++|||++|||+..+.... ...| ..|++ ..++++.|||+|||+||+|.+++..
T Consensus 328 ----~t~~e~eiVrdIKEk~CyVs~~Di~~q------~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~ 397 (655)
T 4am6_A 328 ----DSKHGWLLAERLKKNFTTFQDADVAVQ------LYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTS 397 (655)
T ss_dssp ----TSHHHHHHHHHHHHHHCCCCGGGCCSE------EEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCC
T ss_pred ----CCcchHHHHHHHHHheEEEcccchhhh------hhcceeccCCCCCcceEEEECCeehhCchhcCChhhccccccc
Confidence 113577899999999999964333211 1112 23443 4789999999999999999875421
Q ss_pred CCC------------CCc---------------------cC--------------------------------CCCCCCH
Q 037470 327 PGM------------ENF---------------------AE--------------------------------NIPFRGL 341 (445)
Q Consensus 327 ~~~------------~~~---------------------~~--------------------------------~~~~~~L 341 (445)
.+. |.| ++ .....+|
T Consensus 398 ~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL 477 (655)
T 4am6_A 398 SHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPL 477 (655)
T ss_dssp CCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCH
T ss_pred ccccchhhhhcCccccccCCCCCCccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccH
Confidence 010 000 00 0123699
Q ss_pred HHHHHHHHHh-C---CHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCC----------------------------
Q 037470 342 PQMVIDSINK-C---DVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESP---------------------------- 389 (445)
Q Consensus 342 ~~~I~~~i~~-~---~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p---------------------------- 389 (445)
..+|.+||.. | +...-+++|+||+++||+|+||||...|...|...-|
T Consensus 478 dkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 557 (655)
T 4am6_A 478 EKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVN 557 (655)
T ss_dssp HHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCS
T ss_pred HHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhcc
Confidence 9999999984 3 4444459999999999999999998766665554222
Q ss_pred ---------------------------------------CCceEEEEecCCCCCccceeEeeeEEeecccccccccccHH
Q 037470 390 ---------------------------------------QAARVKVVSSGNATERRFSVWIGGSILASLGSFQQMWFSKS 430 (445)
Q Consensus 390 ---------------------------------------~~~~v~v~~~~~~~~~~~~~W~Gasilasl~~f~~~~itr~ 430 (445)
.-++|+|+++++..++++++|+||||||+|++|+++||||+
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~ 637 (655)
T 4am6_A 558 APDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNS 637 (655)
T ss_dssp CCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHH
T ss_pred ccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHH
Confidence 11358999987777889999999999999999999999999
Q ss_pred HHHHcCchhhhhcCC
Q 037470 431 EYEEHGASYIQRKCP 445 (445)
Q Consensus 431 eY~E~G~~~~~~k~~ 445 (445)
||+|+|+++|++||+
T Consensus 638 Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 638 DWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHGGGGGGTSCS
T ss_pred HHhhhcchheEeccc
Confidence 999999999999995
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.4e-35 Score=291.09 Aligned_cols=306 Identities=16% Similarity=0.213 Sum_probs=241.5
Q ss_pred CcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEeccccccC--
Q 037470 8 SAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGF-- 85 (445)
Q Consensus 8 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-- 85 (445)
.+|+||+||.++++|++++. |...+||+|+..... .+.+++|++|...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-----------------------------~~~~~vG~~A~~~~~ 53 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-----------------------------GEILKVGLEAKNMIG 53 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-----------------------------CCEEEESHHHHTTTT
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-----------------------------CcEEEEcHHHHHhcc
Confidence 47999999999999999876 777899999886421 1356899987542
Q ss_pred -cCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCC-CCCCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccce
Q 037470 86 -RRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPV 161 (445)
Q Consensus 86 -~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~-~~~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~ 161 (445)
...+..+.+|+++|.+.||+.++.+|.+++++..... +.+.++++++|..++..+|+.+.+ |.+| ++.
T Consensus 54 ~~~~~~~~~~p~~~g~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aG--------~~~ 125 (344)
T 1jce_A 54 KTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAG--------ASK 125 (344)
T ss_dssp CCCTTEEEECCEETTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHHHHTT--------CSE
T ss_pred cCCCCeEEEecCCCCeeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHHHHHcC--------CCe
Confidence 2356778899999999999999999999995432222 446889999999999999999999 9999 999
Q ss_pred E-EechhhhhhhccCC-----ceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCcccc
Q 037470 162 I-EFDALVLTSFALGR-----ATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSF 235 (445)
Q Consensus 162 v-~~~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~ 235 (445)
+ ++++|.+|+++++. .+.+|||+|+++|+|+++..|.++.. ...++||+++|+.|.++|.++. .+
T Consensus 126 ~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~~--~~~~lGG~~id~~l~~~l~~~~-~~------ 196 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTW--ESIRIAGDEMDEAIVQYVRETY-RV------ 196 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHHHHHH-CE------
T ss_pred EeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEee--CCCCccChhHHHHHHHHHHHHh-Cc------
Confidence 9 99999999999986 68999999999999999999988753 6789999999999999987542 00
Q ss_pred ccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCceeE-----CCCCc--eEeeCc
Q 037470 236 KRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYE-----LPDGQ--VIEIGA 308 (445)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~-----lpdg~--~i~l~~ 308 (445)
....+.++++|+.+|........+. ..+. +.+|. .+.++.
T Consensus 197 --------------------------~~~~~~ae~~K~~l~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~i~~ 243 (344)
T 1jce_A 197 --------------------------AIGERTAERVKIEIGNVFPSKENDE-------LETTVSGIDLSTGLPRKLTLKG 243 (344)
T ss_dssp --------------------------ECCHHHHHHHHHHHCBCSCCHHHHH-------CEEEEEEEETTTTEEEEEEEEH
T ss_pred --------------------------ccCHHHHHHHHHHHhccCccccCCc-------ceEEEeccccCCCCceeEEEeH
Confidence 0124578999999987654211000 1222 23554 566666
Q ss_pred ccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHh-cCccccCCCCchhhHHHHHHHHHhhh
Q 037470 309 DRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELF-SSILLAGGTASMQQLKERLEKDLLEE 387 (445)
Q Consensus 309 er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~-~nIvLtGG~s~i~Gl~~RL~~eL~~~ 387 (445)
++|. .+|+|.+ ..+.++|.++|.+++.+++.+++ ++|+|+||+|++|||.++|++++..
T Consensus 244 ~~~~---~~~~~~~----------------~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~- 303 (344)
T 1jce_A 244 GEVR---EALRSVV----------------VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGI- 303 (344)
T ss_dssp HHHH---HHTHHHH----------------HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSS-
T ss_pred HHHH---HHHHHHH----------------HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCC-
Confidence 6653 4555532 36899999999999999988888 7999999999999999999999952
Q ss_pred CCCCceEEEEecCCCCCccceeEeeeEEeec-ccccc
Q 037470 388 SPQAARVKVVSSGNATERRFSVWIGGSILAS-LGSFQ 423 (445)
Q Consensus 388 ~p~~~~v~v~~~~~~~~~~~~~W~Gasilas-l~~f~ 423 (445)
+ +.. ..+|.+++|+||+++++ +++|+
T Consensus 304 -----~--v~~---~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 304 -----S--VIR---SEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp -----C--EEE---CSSTTTHHHHHHHHGGGCHHHHT
T ss_pred -----C--ccc---cCChHHHHHHHHHHHHhChHHHH
Confidence 2 333 46788999999999998 56664
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.87 E-value=7.4e-23 Score=193.77 Aligned_cols=210 Identities=22% Similarity=0.253 Sum_probs=159.0
Q ss_pred eccCCCCeecCHHHHHHHHHHHhccccCC-CCCCCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-Eechhh
Q 037470 93 LSPLKDGVVVDWDIVDSIWDHAFRECLLI-DPKEHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALV 168 (445)
Q Consensus 93 ~~P~~~g~i~d~d~~e~i~~~~~~~~L~~-~~~~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~ 168 (445)
..|+++|.|.||+.++.+|+++++..... ......++++.|.......|+.+.+ +.+| ++.. +..++.
T Consensus 59 ~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g--------~~~~~i~~e~~ 130 (272)
T 3h1q_A 59 ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAG--------LELVTLVDEPV 130 (272)
T ss_dssp CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTT--------CEEEEEECHHH
T ss_pred ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcC--------CeeeecccHHH
Confidence 45899999999999999999998543322 2233568888888877777766666 9999 9999 999999
Q ss_pred hhhhccCCceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCccee
Q 037470 169 LTSFALGRATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIV 248 (445)
Q Consensus 169 la~~~~g~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~ 248 (445)
++++++|..+++|||+|+++|.++++.+|.++.. ...++||.++++.+.+.|.
T Consensus 131 A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~~--~~~~~Gg~~~~~~l~~~l~------------------------- 183 (272)
T 3h1q_A 131 AAARALGINDGIVVDIGGGTTGIAVIEKGKITAT--FDEPTGGTHLSLVLAGSYK------------------------- 183 (272)
T ss_dssp HHHHHHTCSSEEEEEECSSCEEEEEEETTEEEEE--CCBSCCHHHHHHHHHHHHT-------------------------
T ss_pred HHHHHHcCCCEEEEEECCCcEEEEEEECCEEEEE--ecCCCcHHHHHHHHHHHhC-------------------------
Confidence 9999999999999999999999999999998854 6799999999999998873
Q ss_pred ccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCceeECCCCceEeeCcccccccccccCCCCCCCCCC
Q 037470 249 DLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPDGQVIEIGADRFKTPDVLFNPSLVQTIPG 328 (445)
Q Consensus 249 ~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lpdg~~i~l~~er~~~~E~lF~p~~~~~~~~ 328 (445)
...+.++++|++++.- .+...+.+.+
T Consensus 184 --------------~~~~~ae~~k~~~~~~-----------------------------~~~~~~~~~~----------- 209 (272)
T 3h1q_A 184 --------------IPFEEAETIKKDFSRH-----------------------------REIMRVVRPV----------- 209 (272)
T ss_dssp --------------CCHHHHHHHHHSSTTH-----------------------------HHHHHHHHHH-----------
T ss_pred --------------CCHHHHHHHHHhcCCH-----------------------------HHHHHHHHHH-----------
Confidence 1234678888875400 0000111111
Q ss_pred CCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccce
Q 037470 329 MENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFS 408 (445)
Q Consensus 329 ~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~ 408 (445)
...+.+.|.+++++++ ...+|+|+||+|++|||.++|++++.. ++.. +.+|.++
T Consensus 210 ---------~~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~--------~v~~---~~~p~~a 263 (272)
T 3h1q_A 210 ---------IEKMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK--------EVQV---PIHPLLV 263 (272)
T ss_dssp ---------HHHHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS--------CCBC---CSSGGGH
T ss_pred ---------HHHHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC--------Cccc---cCChHHH
Confidence 2257777777887776 125899999999999999999999942 2222 4688999
Q ss_pred eEeeeEEee
Q 037470 409 VWIGGSILA 417 (445)
Q Consensus 409 ~W~Gasila 417 (445)
.|+||+++|
T Consensus 264 ~a~Gaal~a 272 (272)
T 3h1q_A 264 TPLGIALFG 272 (272)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHhcC
Confidence 999998764
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.87 E-value=2.6e-23 Score=213.78 Aligned_cols=298 Identities=18% Similarity=0.263 Sum_probs=202.8
Q ss_pred CcEEEeCCCceeEeeecCCCCCCcc--------cCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEec
Q 037470 8 SAIVIDLGSHTCKAGYAGEDAPKAV--------FPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVG 79 (445)
Q Consensus 8 ~~vViD~Gs~~~k~G~ag~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 79 (445)
.+|.||+||.+++++++.+..|.++ +||+|+... ...++|
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~--------------------------------~~~~vG 50 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKN--------------------------------GERLVG 50 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESS--------------------------------SSEEES
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECC--------------------------------CcEEEC
Confidence 4799999999999999988878766 788877621 145677
Q ss_pred cccccCc--CCC--eEEe----ccCC---CCeecCHHHHHHHHHHHhccccC------CCCCCCcEEEecCCCCCHHHHH
Q 037470 80 TQSLGFR--RDH--MEVL----SPLK---DGVVVDWDIVDSIWDHAFRECLL------IDPKEHPMLLAEPSSNTQQQRE 142 (445)
Q Consensus 80 ~~~~~~~--~~~--~~~~----~P~~---~g~i~d~d~~e~i~~~~~~~~L~------~~~~~~~vll~ep~~~~~~~r~ 142 (445)
++|.... ..+ ..+. +|++ +|. +|. .+.++.++| ++|. +......++++.|..++..+|+
T Consensus 51 ~~A~~~~~~~p~~~~~~Kr~lg~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~ 126 (509)
T 2v7y_A 51 EVAKRQAITNPNTIISIKRHMGTDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQ 126 (509)
T ss_dssp HHHHTTTTTCSSEEECGGGTTTSCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHH
T ss_pred HHHHHhHHhCCCcHHHHHHhcCCCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 7664221 111 1111 1665 674 443 455555555 2221 1233468999999999999999
Q ss_pred HHhc--cccCccCCeeeccceE-EechhhhhhhccCC-----ceEEEEEcCCCceEEEEee--ccee-cCccceEecccH
Q 037470 143 SSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR-----ATSLVVDCGGGSTTVAPVH--DGYV-LQKGVTTSPIGG 211 (445)
Q Consensus 143 ~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~--~G~~-~~~~~~~~~~GG 211 (445)
.+.+ +..| ++.+ ++++|.+|++++|. .+.+|+|+|+++|+|+.+. +|.. +.......++||
T Consensus 127 a~~~a~~~AG--------l~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG 198 (509)
T 2v7y_A 127 ATKDAGRIAG--------LEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGG 198 (509)
T ss_dssp HHHHHHHHTT--------CEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSH
T ss_pred HHHHHHHHcC--------CCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCH
Confidence 9999 9999 9999 99999999999886 4799999999999999776 4643 222334578999
Q ss_pred HHHHHHHHHHHHhc-----CCcccCccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCcc
Q 037470 212 EFLTNCLMKSLESK-----GITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDES 286 (445)
Q Consensus 212 ~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~ 286 (445)
.++|+.|.++|.++ +..+.. ....+ ..-.+.++++|+.++....
T Consensus 199 ~d~d~~l~~~l~~~~~~~~~~~~~~-----------------------~~~~~--~~l~~~aE~~K~~ls~~~~------ 247 (509)
T 2v7y_A 199 DDFDQVIIDYLVNQFKQEHGIDLSK-----------------------DKMAL--QRLKDAAEKAKKELSGVTQ------ 247 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCGGG-----------------------CHHHH--HHHHHHHHHHHHHTTTCSE------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-----------------------CHHHH--HHHHHHHHHHHHhcCCCCc------
Confidence 99999999988654 211100 00000 1234678999998875321
Q ss_pred ccCCCCCceeECC------CC---ceEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhH
Q 037470 287 AYSNIPMTPYELP------DG---QVIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIR 357 (445)
Q Consensus 287 ~~~~~~~~~~~lp------dg---~~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r 357 (445)
..+.+| +| ..+.++.++| |.+|+|.+ ..+.+.|.++|..+.. .
T Consensus 248 -------~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~----------------~~i~~~i~~~L~~a~~--~ 299 (509)
T 2v7y_A 248 -------TQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV----------------ERTMGPVRQALQDAGL--T 299 (509)
T ss_dssp -------EEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH----------------HTTHHHHHHHHHHHTC--C
T ss_pred -------EEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH----------------HHHHHHHHHHHHHcCC--C
Confidence 112222 23 2345555554 34555532 2577888888887753 3
Q ss_pred HHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeecc
Q 037470 358 RELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILASL 419 (445)
Q Consensus 358 ~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilasl 419 (445)
.....+|+|+||+|.+|++.++|++++.. .+.. ..+|..++|+||+++|..
T Consensus 300 ~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~---~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 300 PADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHK---GVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp GGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBC---CSCTTTHHHHHHHHHHHH
T ss_pred hhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCc---CCCchhhhHhhHHHHHHH
Confidence 34568999999999999999999999852 1122 467889999999999863
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.85 E-value=4.9e-22 Score=197.49 Aligned_cols=223 Identities=15% Similarity=0.179 Sum_probs=156.6
Q ss_pred CCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCCc------eEEEEEcCCCceEEEEee
Q 037470 125 EHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGRA------TSLVVDCGGGSTTVAPVH 195 (445)
Q Consensus 125 ~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~~------tglVVDiG~~~t~v~pV~ 195 (445)
...++++.|..++..+|+.+.+ +..| ++.+ ++.+|.+++++++.. +.+|||+|+++|+++.+.
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a~~~aG--------l~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDAGRIAG--------LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHHHHHTT--------CEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHcC--------CceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEE
Confidence 3579999999999999999999 9999 9999 999999999887653 789999999999999877
Q ss_pred cc------eecC-ccceEecccHHHHHHHHHHHHHhc-----CCcccCccccccccCCCCCcceeccCCCCCchhHHhHh
Q 037470 196 DG------YVLQ-KGVTTSPIGGEFLTNCLMKSLESK-----GITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYC 263 (445)
Q Consensus 196 ~G------~~~~-~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 263 (445)
.+ .... ......++||.++|+.|.++|.++ +..+. .....+ ..
T Consensus 207 ~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~-----------------------~~~~~~--~~ 261 (383)
T 1dkg_D 207 IDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLR-----------------------NDPLAM--QR 261 (383)
T ss_dssp EEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCST-----------------------TCHHHH--HH
T ss_pred EEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcc-----------------------cCHHHH--HH
Confidence 54 2211 123447899999999999988664 21110 000011 12
Q ss_pred HHHHHHHHhhcceecCCCcCCccccCCCCCceeECCCC-c--eEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCC
Q 037470 264 QRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPDG-Q--VIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRG 340 (445)
Q Consensus 264 ~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lpdg-~--~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~ 340 (445)
..+.++++|+.++........- ...+.+++| . .+.++.++|. .+|+|.+ ..
T Consensus 262 l~~~ae~~K~~ls~~~~~~i~i-------~~~~~~~~G~~~~~~~it~~~~~---~~~~~~~----------------~~ 315 (383)
T 1dkg_D 262 LKEAAEKAKIELSSAQQTDVNL-------PYITADATGPKHMNIKVTRAKLE---SLVEDLV----------------NR 315 (383)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEE-------EEEEEETTEEEEEEEEEEHHHHH---HHSHHHH----------------HH
T ss_pred HHHHHHHHHHHhCCCCceEEEE-------ecccccCCCCeeEEEEEeHHHHH---HHHHHHH----------------HH
Confidence 3467899999987543110000 001233444 2 3455555543 4455532 26
Q ss_pred HHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeecc
Q 037470 341 LPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILASL 419 (445)
Q Consensus 341 L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilasl 419 (445)
+.++|.++|.++.. ......+|+|+||+|++||+.++|++++.. ++.. ..+|.+++|+||+++|++
T Consensus 316 i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~~---~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 316 SIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRK---DVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp HHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCBC---SSCTTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCCC---CcChHHHHHHHHHHHHHh
Confidence 88889999988853 334458999999999999999999999952 1223 467889999999999874
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.82 E-value=2.3e-21 Score=193.30 Aligned_cols=223 Identities=17% Similarity=0.227 Sum_probs=148.1
Q ss_pred CCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCCc------eEEEEEcCCCceEEEEee
Q 037470 125 EHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGRA------TSLVVDCGGGSTTVAPVH 195 (445)
Q Consensus 125 ~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~~------tglVVDiG~~~t~v~pV~ 195 (445)
-..++++.|..++..+|+.+.+ +..| ++.+ ++.+|.+++++++.. +.+|+|+|+++|+++.+.
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~~~aG--------l~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~ 224 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAGTIAG--------LNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLS 224 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTT--------CEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHHHHcC--------CceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEE
Confidence 4579999999999999999988 9999 9999 999999999998754 449999999999888775
Q ss_pred --cceecCcc-ceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHh
Q 037470 196 --DGYVLQKG-VTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIK 272 (445)
Q Consensus 196 --~G~~~~~~-~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iK 272 (445)
++.....+ ....++||.++|+.|.+++.++... .+.. +........ ..-...++++|
T Consensus 225 ~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~---~~~~---------------~~~~~~~~~--~~l~~~ae~~K 284 (394)
T 3qfu_A 225 IENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKK---KHGI---------------DVSDNNKAL--AKLKREAEKAK 284 (394)
T ss_dssp EETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH---HHSC---------------CCTTCHHHH--HHHHHHHHHHH
T ss_pred EeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHH---HcCC---------------CCCcCHHHH--HHHHHHHHHHH
Confidence 44332222 2347999999999999988542100 0000 000000111 12234678888
Q ss_pred hcceecCCCcCCccccCCCCCceeEC---CCCc--eEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHH
Q 037470 273 ECVCRAPDTPYDESAYSNIPMTPYEL---PDGQ--VIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVID 347 (445)
Q Consensus 273 e~~~~v~~~~~~~~~~~~~~~~~~~l---pdg~--~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~ 347 (445)
+.+..... ..+.+ .++. .+.+..+.| |-++.|. ...+.+.|.+
T Consensus 285 ~~ls~~~~-------------~~~~~~~~~~~~~~~~~i~r~~~---~~~~~~~----------------~~~i~~~i~~ 332 (394)
T 3qfu_A 285 RALSSQMS-------------TRIEIDSFVDGIDLSETLTRAKF---EELNLDL----------------FKKTLKPVEK 332 (394)
T ss_dssp HHTTTCSE-------------EEEEEEEEETTEEEEEEEEHHHH---HHHHHHH----------------HHHTHHHHHH
T ss_pred HHcccCCc-------------EEEEEEeccCCceeEEEEEHHHH---HHHHHHH----------------HHHHHHHHHH
Confidence 77542211 11111 1222 334444433 2334432 2257778888
Q ss_pred HHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeecc
Q 037470 348 SINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILASL 419 (445)
Q Consensus 348 ~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilasl 419 (445)
+|..+..+ .....+|+|+||+|++|++.++|++.+... ++.. +.+|..++|.||+++|.+
T Consensus 333 ~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-------~v~~---~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 333 VLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDGK-------KASK---GINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp HHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTTC-------CCBC---CSCTTTHHHHHHHHHHHH
T ss_pred HHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCCC-------CCCC---CcCHHHHHHHHHHHHHHh
Confidence 88876544 345599999999999999999999988321 2223 467889999999998864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.77 E-value=1e-19 Score=181.97 Aligned_cols=223 Identities=19% Similarity=0.293 Sum_probs=146.9
Q ss_pred CCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCCc---------eEEEEEcCCCceEEE
Q 037470 125 EHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGRA---------TSLVVDCGGGSTTVA 192 (445)
Q Consensus 125 ~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~~---------tglVVDiG~~~t~v~ 192 (445)
-..++|+.|..++..+|+.+.+ +..| ++.+ ++++|.+|+++++.. +.+|+|+|+++|+++
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a~~~AG--------l~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvs 229 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDAGTITG--------LNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVS 229 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHHT--------CEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEE
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHcC--------CCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEE
Confidence 3579999999999999999988 9999 9999 999999999988754 349999999999998
Q ss_pred Eee--ccee-cCccceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHH
Q 037470 193 PVH--DGYV-LQKGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIAS 269 (445)
Q Consensus 193 pV~--~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 269 (445)
.+. +|.. +.......++||.++++.|.+.|.++... .+.. ......... ..-...++
T Consensus 230 v~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~---~~~~---------------~~~~~~~~~--~~l~~~ae 289 (404)
T 3i33_A 230 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKR---KHKK---------------DIGPNKRAV--RRLRTACE 289 (404)
T ss_dssp EEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH---HHSC---------------CCTTCHHHH--HHHHHHHH
T ss_pred EEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH---HhCC---------------CcCCCHHHH--HHHHHHHH
Confidence 775 4433 22223447899999999999988542100 0000 000000111 12235678
Q ss_pred HHhhcceecCCCcCCccccCCCCCceeEC---CCCc--eEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHH
Q 037470 270 DIKECVCRAPDTPYDESAYSNIPMTPYEL---PDGQ--VIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQM 344 (445)
Q Consensus 270 ~iKe~~~~v~~~~~~~~~~~~~~~~~~~l---pdg~--~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~ 344 (445)
++|+.+..... ....+ .+|. .+.+..+.| |-++.|. ...+.+.
T Consensus 290 ~~K~~ls~~~~-------------~~~~~~~~~~g~~~~~~i~r~~~---~~~~~~~----------------~~~i~~~ 337 (404)
T 3i33_A 290 RAKRTLSSSTQ-------------ASIEIDSLYEGVDFYTSITRARF---EELNADL----------------FRGTLEP 337 (404)
T ss_dssp HHHHHTTTSSE-------------EEEEEEEEETTEEEEEEEEHHHH---HHHTHHH----------------HHHTHHH
T ss_pred HHHHhCCcCcc-------------eEEEEeeccCCceeEEEEcHHHH---HHHHHHH----------------HHHHHHH
Confidence 88887642211 01111 1222 334444433 2334432 2256777
Q ss_pred HHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeecc
Q 037470 345 VIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILASL 419 (445)
Q Consensus 345 I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilasl 419 (445)
|.++|..+..+ ......|+|+||+|++|++.++|++.+... ++.. ..+|..+++.||+++|.+
T Consensus 338 i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-------~v~~---~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 338 VEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQKLLQDFFNGK-------ELNK---SINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp HHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBC---SSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC--HhhCCEEEEECCccccHHHHHHHHHHcCCC-------CCCC---CcCHHHHHHHHHHHHHHH
Confidence 88888775432 234588999999999999999999988321 2223 467889999999998864
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.67 E-value=6.5e-17 Score=169.24 Aligned_cols=217 Identities=17% Similarity=0.226 Sum_probs=148.3
Q ss_pred CCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCC------ceEEEEEcCCCceEEEEee
Q 037470 125 EHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR------ATSLVVDCGGGSTTVAPVH 195 (445)
Q Consensus 125 ~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~------~tglVVDiG~~~t~v~pV~ 195 (445)
-..++++.|..++..+|+.+.+ +..| +..+ ++++|.+|++++|. .+.+|+|+|+++++|+.+.
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~~~AG--------l~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAGRIAG--------LEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTTT--------CEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEE
T ss_pred CcEEEEEECCCCCHHHHHHHHHHHHHcC--------CceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEE
Confidence 3569999999999999999988 8889 9999 99999999988864 3479999999999999887
Q ss_pred c------cee-cCccceEecccHHHHHHHHHHHHHhc-----CCcccCccccccccCCCCCcceeccCCCCCchhHHhHh
Q 037470 196 D------GYV-LQKGVTTSPIGGEFLTNCLMKSLESK-----GITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYC 263 (445)
Q Consensus 196 ~------G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 263 (445)
- |.. +.......++||.++|+.|.+++.++ +..+. .....+ ..
T Consensus 207 ~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~-----------------------~~~~~~--~~ 261 (605)
T 2kho_A 207 IDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLR-----------------------NDPLAM--QR 261 (605)
T ss_dssp EECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCST-----------------------TCHHHH--HH
T ss_pred EEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcc-----------------------cCHHHH--HH
Confidence 3 433 11223446899999999999888653 21110 000111 12
Q ss_pred HHHHHHHHhhcceecCCCcCCccccCCCCCceeECC------CC-c--eEeeCcccccccccccCCCCCCCCCCCCCccC
Q 037470 264 QRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELP------DG-Q--VIEIGADRFKTPDVLFNPSLVQTIPGMENFAE 334 (445)
Q Consensus 264 ~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lp------dg-~--~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~ 334 (445)
-...++++|+.++.... ....+| +| . .+.+..+.| |-++.|.+
T Consensus 262 L~~~aE~~K~~ls~~~~-------------~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~------------ 313 (605)
T 2kho_A 262 LKEAAEKAKIELSSAQQ-------------TDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDLV------------ 313 (605)
T ss_dssp HHHHHHHHHHHTTSSSE-------------EEEEEEEEEEETTEEEEEEEEEEHHHH---HTTCCSTT------------
T ss_pred HHHHHHHHHHHcCCCCc-------------eEEEecccccCCCCceEEEEEEeHHHH---HHHHHHHH------------
Confidence 34568899988764321 111111 22 1 234444443 34555532
Q ss_pred CCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeE
Q 037470 335 NIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGS 414 (445)
Q Consensus 335 ~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gas 414 (445)
..+.+.|.++|..+.. ...-...|+|+||+|.+|++.++|++.+... +.. ..+|..+++.||+
T Consensus 314 ----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~~--------~~~---~~npd~aVA~GAa 376 (605)
T 2kho_A 314 ----NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGKE--------PRK---DVNPDEAVAIGAA 376 (605)
T ss_dssp ----GGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSSC--------CBC---SSCTTTHHHHHHH
T ss_pred ----HHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCCC--------cCc---CCCcchHHHHHHH
Confidence 2466678888887642 1223489999999999999999999988421 122 4677899999999
Q ss_pred Eeecc
Q 037470 415 ILASL 419 (445)
Q Consensus 415 ilasl 419 (445)
+.|..
T Consensus 377 ~~a~~ 381 (605)
T 2kho_A 377 VQGGV 381 (605)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99863
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.64 E-value=3.7e-16 Score=161.88 Aligned_cols=216 Identities=17% Similarity=0.276 Sum_probs=146.4
Q ss_pred CcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCC-------ceEEEEEcCCCceEEEEee
Q 037470 126 HPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR-------ATSLVVDCGGGSTTVAPVH 195 (445)
Q Consensus 126 ~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~-------~tglVVDiG~~~t~v~pV~ 195 (445)
..++|+.|..++..+|+.+.+ +..| ++.+ ++++|.+|++++|. .+.+|+|+|+++++|+.+.
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A~~~AG--------l~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~ 211 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDAGTIAG--------LNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILT 211 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHTTT--------CEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHcC--------CCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEE
Confidence 579999999999999999988 9999 9999 99999999988763 4689999999999999887
Q ss_pred --ccee-cCccceEecccHHHHHHHHHHHHHhc-----CCcccCccccccccCCCCCcceeccCCCCCchhHHhHhHHHH
Q 037470 196 --DGYV-LQKGVTTSPIGGEFLTNCLMKSLESK-----GITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVI 267 (445)
Q Consensus 196 --~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 267 (445)
+|.+ +.......++||.++|+.|.++|.++ +..+. .....+ ..-...
T Consensus 212 ~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~-----------------------~~~~~~--~~l~~~ 266 (554)
T 1yuw_A 212 IAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDIS-----------------------ENKRAV--RRLRTA 266 (554)
T ss_dssp EETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTT-----------------------SCHHHH--HHHHHH
T ss_pred EcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcc-----------------------cCHHHH--HHHHHH
Confidence 6754 22334457899999999999888542 21110 000011 122356
Q ss_pred HHHHhhcceecCCCcCCccccCCCCCceeECC---CCc--eEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHH
Q 037470 268 ASDIKECVCRAPDTPYDESAYSNIPMTPYELP---DGQ--VIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLP 342 (445)
Q Consensus 268 ~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lp---dg~--~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~ 342 (445)
++++|+.++.... ....++ +|. .+.+..+.| |.++.|.+ ..+.
T Consensus 267 aE~~K~~ls~~~~-------------~~i~i~~~~~g~~~~~~ltr~~~---e~l~~~~~----------------~~i~ 314 (554)
T 1yuw_A 267 CERAKRTLSSSTQ-------------ASIEIDSLYEGIDFYTSITRARF---EELNADLF----------------RGTL 314 (554)
T ss_dssp HHHHHHHHTTSSE-------------EEEEETTCSSSCCEEEEEEHHHH---HHHTHHHH----------------HHTT
T ss_pred HHHHhhhcccCce-------------EEEEEeeccCCceEEEEEEHHHH---HHHHHHHH----------------HHHH
Confidence 8899988754321 112221 232 334444433 22333321 1345
Q ss_pred HHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeec
Q 037470 343 QMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILAS 418 (445)
Q Consensus 343 ~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilas 418 (445)
+.|.+++..+.. ...-...|+|+||+|.+|++.++|++.+... ++.. ..+|..+++.||+++|.
T Consensus 315 ~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~f~~~-------~v~~---~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 315 DPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNK---SINPDEAVAYGAAVQAA 378 (554)
T ss_dssp HHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBC---CSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHHHHHcCCC-------cccc---CCCchhHHHHHHHHHHH
Confidence 567777776532 1233589999999999999999999887432 1222 46788999999999886
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.57 E-value=2.6e-15 Score=158.49 Aligned_cols=215 Identities=15% Similarity=0.250 Sum_probs=145.3
Q ss_pred CcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCC------------ceEEEEEcCCCceE
Q 037470 126 HPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR------------ATSLVVDCGGGSTT 190 (445)
Q Consensus 126 ~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~------------~tglVVDiG~~~t~ 190 (445)
..++|+.|..++..+|+.+.+ +..| ++.+ ++++|.+|++++|. .+.+|+|+|+++|+
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa~~AG--------l~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~D 210 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAARIAG--------LNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYT 210 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTT--------CEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcC--------CceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEE
Confidence 479999999999999999998 8889 9999 99999999987642 46899999999999
Q ss_pred EEEee--ccee-cCccceEecccHHHHHHHHHHHHHhc-----CCcccCccccccccCCCCCcceeccCCCCCchhHHhH
Q 037470 191 VAPVH--DGYV-LQKGVTTSPIGGEFLTNCLMKSLESK-----GITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLY 262 (445)
Q Consensus 191 v~pV~--~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 262 (445)
|+.+. +|.+ +.......++||.++|+.|.++|.++ +..+.. ....+ .
T Consensus 211 vsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~-----------------------~~~a~--~ 265 (675)
T 3d2f_A 211 CSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRE-----------------------NPKAY--N 265 (675)
T ss_dssp EEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGG-----------------------CHHHH--H
T ss_pred EEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCC-----------------------CHHHH--H
Confidence 99886 6754 33333457899999999999988542 211100 00001 1
Q ss_pred hHHHHHHHHhhcceecCCCcCCccccCCCCCceeECC---CC--ceEeeCcccccccccccCCCCCCCCCCCCCccCCCC
Q 037470 263 CQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELP---DG--QVIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIP 337 (445)
Q Consensus 263 ~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lp---dg--~~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~ 337 (445)
.-...++++|+.++..... .+.++ +| ..+.+..+.| |-++.|.+
T Consensus 266 rL~~~aE~aK~~Ls~~~~~-------------~i~i~~~~~g~~~~~~itr~~f---e~l~~~l~--------------- 314 (675)
T 3d2f_A 266 RILTAAEKLKKVLSANTNA-------------PFSVESVMNDVDVSSQLSREEL---EELVKPLL--------------- 314 (675)
T ss_dssp HHHHHHHHHHHHHHHCSEE-------------EEEETTSSSSCCEEEEEEHHHH---HHHTHHHH---------------
T ss_pred HHHHHHHHHHHhcCcCCce-------------EEEEeeeccCceEEEEEeHHHH---HHHHHHHH---------------
Confidence 2235688899887642210 11111 11 2344544443 23333321
Q ss_pred CCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEee
Q 037470 338 FRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILA 417 (445)
Q Consensus 338 ~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasila 417 (445)
..+.+.|.+++...... ..-...|+|+||+|.+|++.++|++.+.. .+.. ..+|..++++||++.|
T Consensus 315 -~~i~~~i~~~L~~a~l~--~~~I~~VvLvGGssriP~v~~~l~~~fg~--------~~~~---~~nPdeaVA~GAa~~a 380 (675)
T 3d2f_A 315 -ERVTEPVTKALAQAKLS--AEEVDFVEIIGGTTRIPTLKQSISEAFGK--------PLST---TLNQDEAIAKGAAFIC 380 (675)
T ss_dssp -TTTTHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHHTS--------CEEC---CSCTTTHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCCC--hhhCcEEEEECCCccChHHHHHHHHhcCC--------Cccc---cCCcchHHHHHHHHHH
Confidence 24566777777765321 11247999999999999999999988842 1223 4677899999999887
Q ss_pred c
Q 037470 418 S 418 (445)
Q Consensus 418 s 418 (445)
.
T Consensus 381 ~ 381 (675)
T 3d2f_A 381 A 381 (675)
T ss_dssp H
T ss_pred H
Confidence 6
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.56 E-value=6.2e-16 Score=154.73 Aligned_cols=249 Identities=16% Similarity=0.206 Sum_probs=154.9
Q ss_pred HHHHHHHHHHhc---cccCCCCCCCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCCc-
Q 037470 105 DIVDSIWDHAFR---ECLLIDPKEHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGRA- 177 (445)
Q Consensus 105 d~~e~i~~~~~~---~~L~~~~~~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~~- 177 (445)
+....+++++.. ..++ .....++++.|..++..+|+.+.+ +..| +..+ ++.+|.+++++++..
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~~~AG--------l~~~~li~Ep~AAa~~~~~~~ 198 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAAAAAD--------LEVLQLISEPAAAVLAYDARP 198 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHHHHTT--------CEEEEEEEHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHHHHcC--------CCeEEEEcCHHHHHHHHhccc
Confidence 334455555542 3333 334579999999999999999988 8889 8899 999999999998764
Q ss_pred -------eEEEEEcCCCceEEEEee--cceecC-ccceEecccHHHHHHHHHHHHHhcCCcccCccccccccCCCCCcce
Q 037470 178 -------TSLVVDCGGGSTTVAPVH--DGYVLQ-KGVTTSPIGGEFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQI 247 (445)
Q Consensus 178 -------tglVVDiG~~~t~v~pV~--~G~~~~-~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 247 (445)
+.+|+|+|+++|+++.+. +|..-. ......++||.++|+.|.++|.++.... +. ..
T Consensus 199 ~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~---~~------~~----- 264 (409)
T 4gni_A 199 EATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKK---NP------GA----- 264 (409)
T ss_dssp ----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHH---ST------TC-----
T ss_pred ccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHH---hC------CC-----
Confidence 589999999999998753 443221 1123479999999999999886532100 00 00
Q ss_pred eccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCceeEC---CCCc--eEeeCcccccccccccCCCC
Q 037470 248 VDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYEL---PDGQ--VIEIGADRFKTPDVLFNPSL 322 (445)
Q Consensus 248 ~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~l---pdg~--~i~l~~er~~~~E~lF~p~~ 322 (445)
.+.......+ ..-...++++|+.+..... ....+ .++. .+.+..+.| |-+|.|.+
T Consensus 265 --~~~~~~~~~~--~~l~~~ae~~K~~ls~~~~-------------~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~~ 324 (409)
T 4gni_A 265 --KDPRENPRSL--AKLRLEAESTKRALSRSTN-------------ASFSVESLIDGLDFASTINRLRY---ETIARTVF 324 (409)
T ss_dssp --CCGGGSHHHH--HHHHHHHHHHHHHHHHSSE-------------EEEEEEEEETTEEEEEEEEHHHH---HHHTHHHH
T ss_pred --CCcccCHHHH--HHHHHHHHHHHHhCCCCCc-------------eEEEeecccCCcceEEEeeHHHH---HHHHHHHH
Confidence 0000000001 1122457888887642211 11111 1222 233433322 23344321
Q ss_pred CCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEec---
Q 037470 323 VQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSS--- 399 (445)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~--- 399 (445)
..+.++|.+.|..... .......|+|+||+|.+|++.++|++.+... ++|..|
T Consensus 325 ----------------~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~------~~v~~P~~~ 380 (409)
T 4gni_A 325 ----------------EGFNRLVESAVKKAGL--DPLDVDEVIMSGGTSNTPRIAANFRYIFPES------TRILAPSTD 380 (409)
T ss_dssp ----------------HHHHHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHHHHSCTT------SEEESTTTC
T ss_pred ----------------HHHHHHHHHHHHHcCC--CHHHCCEEEEECCccccHHHHHHHHHHcCCc------ccccccccc
Confidence 2577777788876632 2233588999999999999999999887432 244333
Q ss_pred CCCCCccceeEeeeEEeecccc
Q 037470 400 GNATERRFSVWIGGSILASLGS 421 (445)
Q Consensus 400 ~~~~~~~~~~W~Gasilasl~~ 421 (445)
....+|..++-.||++.+....
T Consensus 381 ~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 381 PSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp TTCCCTTTHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhhhh
Confidence 2356788899999999987643
No 18
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.52 E-value=1e-14 Score=142.27 Aligned_cols=193 Identities=17% Similarity=0.109 Sum_probs=128.6
Q ss_pred CcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCC-cCCC---CCcceEeccccc
Q 037470 8 SAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDS-NKGK---GKRKLYVGTQSL 83 (445)
Q Consensus 8 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~G~~~~ 83 (445)
-.|-||+|+.++|+-. ++ .-.+.+||+++........ .+ +..+..+ +... ..+.+.+|++|.
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~--~~----------~~~~v~~~~g~~~~~~~~~~~vG~~A~ 87 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWG--IG----------GKIPVLSTDGGQTKFIYGKYASGNNIR 87 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----------------CCCCBBSSTTSSEEEEGGGCCSSCCB
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccC--cC----------cceEEEEecccccccCCcEEEEcccee
Confidence 3589999999999953 33 2355799999876532100 00 0011111 0000 125678887653
Q ss_pred cCcCCCeEEeccCCCCeecCHHHHHHHHHHHhcccc-CCCCCCCcEE--EecCCCCCHHHHHHHhc--cccCc-cC---C
Q 037470 84 GFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECL-LIDPKEHPML--LAEPSSNTQQQRESSAF--SFWVC-VC---G 154 (445)
Q Consensus 84 ~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L-~~~~~~~~vl--l~ep~~~~~~~r~~~~e--E~~~~-~~---~ 154 (445)
+|+.+|.+.| +..+.++.+.+.+.. ........++ ++.|......+|+.+.+ ..... +. +
T Consensus 88 ----------~~l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G 156 (346)
T 2fsj_A 88 ----------VPQGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEG 156 (346)
T ss_dssp ----------CCSSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGG
T ss_pred ----------cccCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCC
Confidence 7999999999 888888888885432 1112334589 99999888888877766 22200 00 0
Q ss_pred --eeeccceE-Eechhhhhhhcc--C-----C-ceEEEEEcCCCceEEEEee--cceecCccceEecccHHHHHHHHHHH
Q 037470 155 --ILVFCPVI-EFDALVLTSFAL--G-----R-ATSLVVDCGGGSTTVAPVH--DGYVLQKGVTTSPIGGEFLTNCLMKS 221 (445)
Q Consensus 155 --~~~~~p~v-~~~~~~la~~~~--g-----~-~tglVVDiG~~~t~v~pV~--~G~~~~~~~~~~~~GG~~lt~~l~~~ 221 (445)
...-+..+ +.++|.+|++++ + . .+.+|||||+++|+|+.+. +|.++......+++||+++++.+.+.
T Consensus 157 ~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~ 236 (346)
T 2fsj_A 157 EVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRK 236 (346)
T ss_dssp CEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHH
T ss_pred ceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHH
Confidence 00014568 999999999974 2 1 3459999999999999999 88766655678899999999999998
Q ss_pred HHhc
Q 037470 222 LESK 225 (445)
Q Consensus 222 l~~~ 225 (445)
++++
T Consensus 237 i~~~ 240 (346)
T 2fsj_A 237 IAKE 240 (346)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.49 E-value=1.9e-13 Score=135.16 Aligned_cols=168 Identities=17% Similarity=0.127 Sum_probs=106.6
Q ss_pred HHHhc--cccCccCCeeeccceE-EechhhhhhhccCC-------ceEEEEEcCCCceEEEEeecceecCccceEecccH
Q 037470 142 ESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR-------ATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGG 211 (445)
Q Consensus 142 ~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~-------~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG 211 (445)
+.+.+ +..| +... +..+|++++++++. .+.+|||+|+++|+++.+.+|.++.. ..+++||
T Consensus 154 ~~~~~~~~~aG--------l~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG 223 (377)
T 2ych_A 154 AGVLEALRGAG--------LVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAV--RVLTLSG 223 (377)
T ss_dssp HHHHHHHHHTT--------CEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEE--EEESCSH
T ss_pred HHHHHHHHHCC--------CceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEE--EeeechH
Confidence 44444 7778 8888 99999999888642 34699999999999999999998764 7799999
Q ss_pred HHHHHHHHHHHHhcCCcccCccccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCC
Q 037470 212 EFLTNCLMKSLESKGITIKPRYSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNI 291 (445)
Q Consensus 212 ~~lt~~l~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~ 291 (445)
.++|+.+.+.+ + ...+.++++|+.++.......++.
T Consensus 224 ~~i~~~i~~~~---~------------------------------------~~~~~aE~~K~~~~~~~~~~~~~~----- 259 (377)
T 2ych_A 224 KDFTEAIARSF---N------------------------------------LDLLAAEEVKRTYGMATLPTEDEE----- 259 (377)
T ss_dssp HHHHHHHHHHT---T------------------------------------CCHHHHHHHHHHTC---------------
T ss_pred HHHHHHHHHHh---C------------------------------------CCHHHHHHHHhhcccccccccccc-----
Confidence 99999998743 1 123468999998876543211110
Q ss_pred CCceeECCCCceEeeCcccccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCC
Q 037470 292 PMTPYELPDGQVIEIGADRFKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTA 371 (445)
Q Consensus 292 ~~~~~~lpdg~~i~l~~er~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s 371 (445)
..+.+|+ ..+.++.+.+ .|++ .|. ...|.+.|.++|..++...+....++|+|+||+|
T Consensus 260 --~~i~~~~-~~~~i~~~~~--~~~i-~~~----------------~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s 317 (377)
T 2ych_A 260 --LLLDFDA-ERERYSPGRI--YDAI-RPV----------------LVELTQELRRSLEFFRIQLEEASPEVGYLLGGGS 317 (377)
T ss_dssp ------------------CH--HHHH-HHH----------------HHHHHHHHHHHHHHHHHHC---CCSEEEEESGGG
T ss_pred --ccccccc-ccccCCHHHH--HHHH-HHH----------------HHHHHHHHHHHHHHHHhccCCCCcCEEEEECccc
Confidence 1122322 2222322211 1111 111 1256677777777665556666789999999999
Q ss_pred chhhHHHHHHHHHh
Q 037470 372 SMQQLKERLEKDLL 385 (445)
Q Consensus 372 ~i~Gl~~RL~~eL~ 385 (445)
++|||.++|++++.
T Consensus 318 ~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 318 KLRGLASLLTDTLG 331 (377)
T ss_dssp GSTTHHHHHHHHHT
T ss_pred cchhHHHHHHHHhC
Confidence 99999999999994
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.40 E-value=9.3e-13 Score=137.74 Aligned_cols=237 Identities=16% Similarity=0.207 Sum_probs=144.0
Q ss_pred HHHHHHHHHhc---cccCCCCCCCcEEEecCCCCCHHHHHHHhc--cccCccCCeeeccceE-EechhhhhhhccCC---
Q 037470 106 IVDSIWDHAFR---ECLLIDPKEHPMLLAEPSSNTQQQRESSAF--SFWVCVCGILVFCPVI-EFDALVLTSFALGR--- 176 (445)
Q Consensus 106 ~~e~i~~~~~~---~~L~~~~~~~~vll~ep~~~~~~~r~~~~e--E~~~~~~~~~~~~p~v-~~~~~~la~~~~g~--- 176 (445)
....+++++.. ..++. .-..++||.|..++..+|+.+.+ +..| ++.+ ++++|.+|++++|.
T Consensus 115 i~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr~a~~~Aa~~AG--------l~v~~li~EP~AAAlaygl~~~ 184 (605)
T 4b9q_A 115 ISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQATKDAGRIAG--------LEVKRIINEPTAAALAYGLDKG 184 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHHHHHHHHHHHTT--------CEEEEEEEHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHHHHHHHcC--------CceEEEeCcHHHHHHHhhhhcc
Confidence 33445554432 34443 23578999999999999999988 8899 9999 99999999988763
Q ss_pred ---ceEEEEEcCCCceEEEEeecce------e-cCccceEecccHHHHHHHHHHHHHhc-----CCcccCccccccccCC
Q 037470 177 ---ATSLVVDCGGGSTTVAPVHDGY------V-LQKGVTTSPIGGEFLTNCLMKSLESK-----GITIKPRYSFKRKENR 241 (445)
Q Consensus 177 ---~tglVVDiG~~~t~v~pV~~G~------~-~~~~~~~~~~GG~~lt~~l~~~l~~~-----~~~~~p~~~~~~~~~~ 241 (445)
.+-+|+|+|+++++|+.+.-+. . +........+||.++++.|.++|.++ +..+..
T Consensus 185 ~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~---------- 254 (605)
T 4b9q_A 185 TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRN---------- 254 (605)
T ss_dssp CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGG----------
T ss_pred CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCccc----------
Confidence 4678999999999999876433 1 11122336789999999999888653 111100
Q ss_pred CCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCceeECCC--C---ceEeeCccccccccc
Q 037470 242 PGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPD--G---QVIEIGADRFKTPDV 316 (445)
Q Consensus 242 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lpd--g---~~i~l~~er~~~~E~ 316 (445)
....+ ..-...++++|+.+......... ..+...+ | ..+.+..+.| |-
T Consensus 255 -------------~~~~~--~~L~~~aE~~K~~Ls~~~~~~i~---------~~~~~~~~~g~~~~~~~itr~~~---e~ 307 (605)
T 4b9q_A 255 -------------DPLAM--QRLKEAAEKAKIELSSAQQTDVN---------LPYITADATGPKHMNIKVTRAKL---ES 307 (605)
T ss_dssp -------------CHHHH--HHHHHHHHHHHHHTTTCSEEEEE---------EEEEEECSSSEEEEEEEEEHHHH---HH
T ss_pred -------------CHHHH--HHHHHHHHHHHHhcCcCCCeEEE---------EeeeccCCCCCeeEEEEEeHHHH---HH
Confidence 00001 12245678888876432210000 0010001 1 1233333322 22
Q ss_pred ccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEE
Q 037470 317 LFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKV 396 (445)
Q Consensus 317 lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v 396 (445)
++.|.+ ..+.+.|.+++...... ..-...|+|+||+|.+|++.++|++.+... +
T Consensus 308 l~~~~~----------------~~i~~~v~~~L~~a~~~--~~~i~~VvLvGG~sriP~v~~~l~~~fg~~--------~ 361 (605)
T 4b9q_A 308 LVEDLV----------------NRSIEPLKVALQDAGLS--VSDIDDVILVGGQTRMPMVQKKVAEFFGKE--------P 361 (605)
T ss_dssp HHHHHH----------------HHTTHHHHHHHHHTTCC--GGGCSEEEEESGGGGSHHHHHHHHHHHTSC--------C
T ss_pred HHHHHH----------------HHHHHHHHHHHHHcCCC--HHHCcEEEEeCCccCchHHHHHHHHHhccC--------c
Confidence 222211 13445566666654221 122478999999999999999999888421 1
Q ss_pred EecCCCCCccceeEeeeEEeec
Q 037470 397 VSSGNATERRFSVWIGGSILAS 418 (445)
Q Consensus 397 ~~~~~~~~~~~~~W~Gasilas 418 (445)
.. ..+|..++-.||++.|.
T Consensus 362 ~~---~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 362 RK---DVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp CS---SSCTTTHHHHHHHHHHH
T ss_pred CC---CcChhHHHHHhHHHHHH
Confidence 12 35666778888888775
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.38 E-value=1e-12 Score=131.13 Aligned_cols=186 Identities=13% Similarity=0.109 Sum_probs=119.4
Q ss_pred cceE-EechhhhhhhccCC-----ceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHhcCCcccCc
Q 037470 159 CPVI-EFDALVLTSFALGR-----ATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLESKGITIKPR 232 (445)
Q Consensus 159 ~p~v-~~~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~p~ 232 (445)
+.-. +..+|+++++++.. .+.+|||+|+++|+++.+.+|.+... ..+++||+++|+.|.+.|.
T Consensus 182 L~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~dIa~~l~--------- 250 (419)
T 4a2a_A 182 KSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKDVSAVLD--------- 250 (419)
T ss_dssp CSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHHHHHHHT---------
T ss_pred CcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHHHHHHHC---------
Confidence 7778 88999999988765 36899999999999999999998875 6799999999999988762
Q ss_pred cccccccCCCCCcceeccCCCCCchhHHhHhHHHHHHHHhhcceecCCCcCCccccCCCCCceeECCC--C-ceEeeCcc
Q 037470 233 YSFKRKENRPGEFQIVDLDFPNTTESYKLYCQRVIASDIKECVCRAPDTPYDESAYSNIPMTPYELPD--G-QVIEIGAD 309 (445)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~lpd--g-~~i~l~~e 309 (445)
...+.++++|.+++...... ++ ...+++|. + ....+..+
T Consensus 251 ------------------------------~~~~~AE~iK~~~g~a~~~~-~~-------~~~i~v~~~~~~~~~~is~~ 292 (419)
T 4a2a_A 251 ------------------------------TSFEESERLIITHGNAVYND-LK-------EEEIQYRGLDGNTIKTTTAK 292 (419)
T ss_dssp ------------------------------CCHHHHHHHHHHHCCSCCTT-CC-------CCEEEEECTTSCSEEEEEHH
T ss_pred ------------------------------CCHHHHHHHHHHhccCcccC-CC-------CceEEEeecCCccceEEcHH
Confidence 23457899999876543221 11 11222221 1 12223221
Q ss_pred c-ccccccccCCCCCCCCCCCCCccCCCCCCCHHHHHHHHHHhCCH---Hh-HHHHhcCccccCCCCchhhHHHHHHHHH
Q 037470 310 R-FKTPDVLFNPSLVQTIPGMENFAENIPFRGLPQMVIDSINKCDV---DI-RRELFSSILLAGGTASMQQLKERLEKDL 384 (445)
Q Consensus 310 r-~~~~E~lF~p~~~~~~~~~~~~~~~~~~~~L~~~I~~~i~~~~~---d~-r~~L~~nIvLtGG~s~i~Gl~~RL~~eL 384 (445)
. ..+.+.. ...+.+.|.+.|+.... +. ...+...|+||||+|++||+.+.+++.+
T Consensus 293 ~l~~ii~p~--------------------veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~ 352 (419)
T 4a2a_A 293 KLSVIIHAR--------------------LREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF 352 (419)
T ss_dssp HHHHHHHHH--------------------HHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHH--------------------HHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH
Confidence 1 1111111 12466677777776542 22 3456789999999999999999999998
Q ss_pred hhhCCCCceEEEEe-----cCC-------CCCccceeEeeeEEeecc
Q 037470 385 LEESPQAARVKVVS-----SGN-------ATERRFSVWIGGSILASL 419 (445)
Q Consensus 385 ~~~~p~~~~v~v~~-----~~~-------~~~~~~~~W~Gasilasl 419 (445)
.. ++++.. |.. ..+|.|++=+|-.+++.-
T Consensus 353 g~------~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 353 KS------PVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp TS------CEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred CC------CeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhh
Confidence 52 344443 211 135778887877666643
No 22
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.03 E-value=1.4e-10 Score=113.21 Aligned_cols=201 Identities=11% Similarity=0.047 Sum_probs=118.6
Q ss_pred CcEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCc---cCCcCCCCCcc-eEeccccc
Q 037470 8 SAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNN---VDSNKGKGKRK-LYVGTQSL 83 (445)
Q Consensus 8 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~G~~~~ 83 (445)
-.|-||+|-+++|+ ..+. . .+.|||.++........... ...+. ..+........ +++|+.|.
T Consensus 5 ~iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~----------~~~~~~~~~~v~v~~~~~~~y~vG~~A~ 71 (355)
T 3js6_A 5 YVMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKG----------FVDNKLDVSEFIINGNNDEVLLFGNDLD 71 (355)
T ss_dssp EEEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTT----------TSCCCCSCEEEEETTCTTCCEEESTTHH
T ss_pred EEEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccc----------cccCCCCceEEEEecCCeEEEEEchhhh
Confidence 35789999999996 4444 3 46799999865422100000 00000 00011113346 89998775
Q ss_pred cCcCCCeEEeccC-CCCeecCHHHHHHHHHHHhc---cccCCCCCCCcEEEecCCCCCHHHH-HHHhc--c---ccCcc-
Q 037470 84 GFRRDHMEVLSPL-KDGVVVDWDIVDSIWDHAFR---ECLLIDPKEHPMLLAEPSSNTQQQR-ESSAF--S---FWVCV- 152 (445)
Q Consensus 84 ~~~~~~~~~~~P~-~~g~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vll~ep~~~~~~~r-~~~~e--E---~~~~~- 152 (445)
...+. ..+.+ .+....+ +....++..++. ..+.-+..+-.|++..|.......| +++.+ . .+..-
T Consensus 72 ~~~~~---~~~~~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g 147 (355)
T 3js6_A 72 KTTNT---GKDTASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDG 147 (355)
T ss_dssp HHCSC---CEECCCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETT
T ss_pred hcCcc---cccccccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECC
Confidence 32111 12222 3334433 233334434431 1111111123588888888666555 34554 1 11100
Q ss_pred CCeeeccceE-EechhhhhhhccC-----------CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHH
Q 037470 153 CGILVFCPVI-EFDALVLTSFALG-----------RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMK 220 (445)
Q Consensus 153 ~~~~~~~p~v-~~~~~~la~~~~g-----------~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~ 220 (445)
.....-+..+ +.+++++|+++.+ ....+|||||+++|.++.+.+|.+.......+++||..+++.+.+
T Consensus 148 ~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~ 227 (355)
T 3js6_A 148 IAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIAS 227 (355)
T ss_dssp EEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHH
T ss_pred EEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHH
Confidence 0011225789 9999999999875 346789999999999999999999888778899999999999999
Q ss_pred HHHhc
Q 037470 221 SLESK 225 (445)
Q Consensus 221 ~l~~~ 225 (445)
.++++
T Consensus 228 ~l~~~ 232 (355)
T 3js6_A 228 HVSKK 232 (355)
T ss_dssp HTC--
T ss_pred HHHHh
Confidence 98764
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.94 E-value=1.4e-09 Score=104.73 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=56.2
Q ss_pred cceE-EechhhhhhhccC-----CceEEEEEcCCCceEEEEeeccee-cCccceEecccHHHHHHHHHHHHHhc
Q 037470 159 CPVI-EFDALVLTSFALG-----RATSLVVDCGGGSTTVAPVHDGYV-LQKGVTTSPIGGEFLTNCLMKSLESK 225 (445)
Q Consensus 159 ~p~v-~~~~~~la~~~~g-----~~tglVVDiG~~~t~v~pV~~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~ 225 (445)
+..+ +.+++++++++++ ..+.+|||||+++|+++.+.+|.+ +..+....++||.++++.+.+.|.++
T Consensus 140 i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~ 213 (320)
T 2zgy_A 140 IKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA 213 (320)
T ss_dssp EEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC
T ss_pred EEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHc
Confidence 6788 9999999998763 357899999999999999999876 44345677999999999999998654
No 24
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.91 E-value=8.6e-10 Score=106.61 Aligned_cols=192 Identities=15% Similarity=0.010 Sum_probs=116.4
Q ss_pred CCcEEEeCCCceeEeeec--C---CCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEeccc
Q 037470 7 VSAIVIDLGSHTCKAGYA--G---EDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQ 81 (445)
Q Consensus 7 ~~~vViD~Gs~~~k~G~a--g---~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 81 (445)
.-.|-||+|-+++|+-.. + +..-+..|||.++....... + .+.+.. ......+.+++|+.
T Consensus 7 ~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~---------~----~~~~~~--~v~~~G~~Y~vG~~ 71 (329)
T 4apw_A 7 EYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYI---------D----IEGNSH--KIELDGKEYLIGEQ 71 (329)
T ss_dssp EEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESC---------C----CCCSCE--EEECSSSEEEESCC
T ss_pred ceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccc---------c----CCCCce--EEEECCEEEEeCcc
Confidence 346899999999999653 2 12234669999886542100 0 000100 11123467899986
Q ss_pred cccCcCCCeEEeccCCCCeecCHHHHHHHHHHHhccccCCC-CCCCcEEEecCCCCCH--HHHHHHhc--c-----ccCc
Q 037470 82 SLGFRRDHMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLID-PKEHPMLLAEPSSNTQ--QQRESSAF--S-----FWVC 151 (445)
Q Consensus 82 ~~~~~~~~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~~-~~~~~vll~ep~~~~~--~~r~~~~e--E-----~~~~ 151 (445)
+.... +.... +-+....++..++...+... ..+-.+++..|...-. ++|+++.+ . .|..
T Consensus 72 a~~~~---------~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~ 140 (329)
T 4apw_A 72 GVEDS---------SETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKV 140 (329)
T ss_dssp SSSCS---------GGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSST
T ss_pred ccccc---------ccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEE
Confidence 53211 11112 22345566666663444332 1223466667766432 23444443 1 1110
Q ss_pred -cCCeeeccceE-EechhhhhhhccC----CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHHh
Q 037470 152 -VCGILVFCPVI-EFDALVLTSFALG----RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLES 224 (445)
Q Consensus 152 -~~~~~~~~p~v-~~~~~~la~~~~g----~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~ 224 (445)
-.....-+..+ +.++++.++|... ..+.+|||||+++|+++.+.+|.+.......+++||.++++.+.+.|++
T Consensus 141 ~g~~~~i~I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 141 DDKEYSFEITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp TCCCEEEEEEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred CCEEEEEEEeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 00112225678 9999999998762 3577999999999999999999998776778999999999999988876
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.23 E-value=1.1e-06 Score=87.34 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=47.9
Q ss_pred chhhhhhhccCC-----ceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHH
Q 037470 165 DALVLTSFALGR-----ATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLE 223 (445)
Q Consensus 165 ~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~ 223 (445)
-++++|.+++-. ...++||+|+++|++..+.+|..+.. ..+++||+++|..+..-|.
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lg 451 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELG 451 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHT
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhC
Confidence 566677666532 46789999999999999999998886 6699999999999999884
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.20 E-value=1.3e-06 Score=87.34 Aligned_cols=57 Identities=18% Similarity=0.121 Sum_probs=47.1
Q ss_pred chhhhhhhccCC-----ceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHHHHHHH
Q 037470 165 DALVLTSFALGR-----ATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCLMKSLE 223 (445)
Q Consensus 165 ~~~~la~~~~g~-----~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l~~~l~ 223 (445)
-++++|.+++-. ...++||+|+++|++..+.+|..+.. ..+++||+++|..+..-|.
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg 453 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELG 453 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHT
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhC
Confidence 455666666532 46789999999999999999998886 6799999999999999884
No 27
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=90.38 E-value=0.2 Score=47.20 Aligned_cols=25 Identities=28% Similarity=0.607 Sum_probs=23.6
Q ss_pred ceEEEEEcCCCceEEEEeecceecC
Q 037470 177 ATSLVVDCGGGSTTVAPVHDGYVLQ 201 (445)
Q Consensus 177 ~tglVVDiG~~~t~v~pV~~G~~~~ 201 (445)
.++|+||||+.+|+|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999977
No 28
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=90.27 E-value=0.024 Score=52.48 Aligned_cols=66 Identities=12% Similarity=0.266 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeec
Q 037470 340 GLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILAS 418 (445)
Q Consensus 340 ~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilas 418 (445)
++.+.|.+.+... -.+....+.|+|+||.|..|++.++|++.+.. +++. +++|.+..-+||+++|.
T Consensus 188 ~~~~~v~~~l~~~--~~~~~~~~~vvl~GGva~n~~lr~~l~~~~g~--------~~~~---p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 188 GIHTSVAKRVSSL--VKRIGVQRNVVMVGGVARNSGIVRAMAREINT--------EIIV---PDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHHHHHHHHHHHH--HHHHCCCSSEEEESGGGGCHHHHHHHHHHHTS--------CEEC---CSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHhcccCCeEEEecCccchHHHHHHHHHHHCC--------Ceee---CCCcchHHHHHHHHHHH
Confidence 4444554444321 22333447899999999999999999887732 3455 45677877789998874
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=88.97 E-value=0.56 Score=44.21 Aligned_cols=41 Identities=34% Similarity=0.293 Sum_probs=35.8
Q ss_pred CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHH
Q 037470 176 RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCL 218 (445)
Q Consensus 176 ~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l 218 (445)
..+++|||||.++|.++-+.+|.+... ..+|+|+..+++.+
T Consensus 137 ~~~~lvvDIGGGStEl~~~~~~~~~~~--~Sl~~G~v~l~e~~ 177 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGKGYKVREV--ISLPIGIVNLTETF 177 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEEEE--EEECCCHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEeCCceeeE--EEEeccHHHHHHHh
Confidence 567999999999999999999987653 77999999998875
No 30
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=86.15 E-value=0.78 Score=43.20 Aligned_cols=41 Identities=32% Similarity=0.419 Sum_probs=35.0
Q ss_pred CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHH
Q 037470 176 RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCL 218 (445)
Q Consensus 176 ~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l 218 (445)
...++|||||.++|.++-+.+|.+... ..+|+|.-.+++.+
T Consensus 130 ~~~~lviDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 130 DHISLAMDIGGGSVEFIIGNKNEILWK--QSFEIGGQRLIDRF 170 (315)
T ss_dssp TCCEEEEEECSSCEEEEEECSSCEEEE--EEESCCHHHHHHHS
T ss_pred CCCEEEEEeCCCceEEEEEECCeEeee--EEEechhhHHHHHh
Confidence 357999999999999999999987764 77999998887754
No 31
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=84.85 E-value=0.78 Score=43.79 Aligned_cols=42 Identities=36% Similarity=0.359 Sum_probs=32.9
Q ss_pred ceEEEEEcCCCceEEEEeec--ceec--CccceEecccHHHHHHHH
Q 037470 177 ATSLVVDCGGGSTTVAPVHD--GYVL--QKGVTTSPIGGEFLTNCL 218 (445)
Q Consensus 177 ~tglVVDiG~~~t~v~pV~~--G~~~--~~~~~~~~~GG~~lt~~l 218 (445)
..++|||||+++|.++-+.+ +.+. ......+|+|+..+++.+
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERH 191 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHT
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHh
Confidence 56999999999999998877 4331 113578999999999875
No 32
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=84.62 E-value=0.53 Score=45.02 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHhCC-HHhHHHHhcCccccCC-CCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEe
Q 037470 339 RGLPQMVIDSINKCD-VDIRRELFSSILLAGG-TASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSIL 416 (445)
Q Consensus 339 ~~L~~~I~~~i~~~~-~d~r~~L~~nIvLtGG-~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasil 416 (445)
.+|..+|.+.|..+- .-.++.=.++|+++|| .+..|++.+.|.+.|.---... ++++. +.+++|..-+||.++
T Consensus 283 ~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~--~~~~~---~~~~~y~GAlGAaL~ 357 (360)
T 2i7n_A 283 RATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQ--LKALF---LEHEGYFGAVGALLE 357 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTS--CCEEE---ETTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCC--eeEEE---cCCccHHHHHHHHHH
Confidence 356666666554432 1123333468999999 9999999999999986322112 23444 345678877777654
No 33
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=79.56 E-value=5 Score=36.62 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=16.2
Q ss_pred cEEEeCCCceeEeeecCCC
Q 037470 9 AIVIDLGSHTCKAGYAGED 27 (445)
Q Consensus 9 ~vViD~Gs~~~k~G~ag~~ 27 (445)
-++||+|-.++|+|+-.++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 4899999999999987543
No 34
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=78.99 E-value=2.8 Score=42.25 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=33.9
Q ss_pred eEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHHH
Q 037470 178 TSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNCL 218 (445)
Q Consensus 178 tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~l 218 (445)
.++|||||+++|.++-+.+|.+.. ...+|+|.-.+++.+
T Consensus 138 ~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSFAQLY 176 (513)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHHHHHH
Confidence 799999999999999998888765 367999999888765
No 35
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=78.81 E-value=3.1 Score=41.85 Aligned_cols=40 Identities=28% Similarity=0.409 Sum_probs=34.4
Q ss_pred CceEEEEEcCCCceEEEEeecceecCccceEecccHHHHHHH
Q 037470 176 RATSLVVDCGGGSTTVAPVHDGYVLQKGVTTSPIGGEFLTNC 217 (445)
Q Consensus 176 ~~tglVVDiG~~~t~v~pV~~G~~~~~~~~~~~~GG~~lt~~ 217 (445)
...++|||||+++|.++-+.+|.+... ..+|+|.-.+++.
T Consensus 139 ~~~~lvvDIGGGStEl~~~~~~~~~~~--~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 139 QPDGIAGDLGGGSLELIDIKDKSCGEG--ITLPLGGLRLSEQ 178 (508)
T ss_dssp SCEEEEEEECSSCEEEEEEETTEECCC--EEESCCHHHHHHH
T ss_pred CCCeEEEEeCCCceEEEEeeCCeeeeE--EEecceEEehhhc
Confidence 356899999999999999999988764 7799999888863
No 36
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=72.28 E-value=0.57 Score=43.45 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=37.7
Q ss_pred cCccccCC-CCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEee
Q 037470 362 SSILLAGG-TASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILA 417 (445)
Q Consensus 362 ~nIvLtGG-~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasila 417 (445)
++|+++|| .+..|++.++|.+.+... ..+++. +.+++|..-+||++++
T Consensus 238 ~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~---p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 238 ENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYY---VENGAFSGAIGALYLE 286 (287)
T ss_dssp CEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEE---CTTGGGHHHHHHHHTC
T ss_pred CeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEE---CCCccHHHHHHHHHhC
Confidence 57999999 999999999999876542 346666 5677888888887764
No 37
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=61.81 E-value=6.3 Score=37.53 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=25.5
Q ss_pred ceEEEEEcCCCceEEEEeec--ceecCccceEecccH
Q 037470 177 ATSLVVDCGGGSTTVAPVHD--GYVLQKGVTTSPIGG 211 (445)
Q Consensus 177 ~tglVVDiG~~~t~v~pV~~--G~~~~~~~~~~~~GG 211 (445)
.+.+|||||.++|.++-... +.+.......+++||
T Consensus 140 ~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~ 176 (353)
T 3aap_A 140 KSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYG 176 (353)
T ss_dssp SCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETT
T ss_pred ccEEEEEeCCCceEEEEecCCccccCCCceEEEEECC
Confidence 47999999999999997754 334433346677776
No 38
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=60.61 E-value=22 Score=32.35 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=15.3
Q ss_pred EEEeCCCceeEeeecCCC
Q 037470 10 IVIDLGSHTCKAGYAGED 27 (445)
Q Consensus 10 vViD~Gs~~~k~G~ag~~ 27 (445)
++||+|-.++|+|+-.++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999987543
No 39
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=47.08 E-value=1.5 Score=40.21 Aligned_cols=47 Identities=17% Similarity=0.315 Sum_probs=36.9
Q ss_pred cCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEeecc
Q 037470 362 SSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILASL 419 (445)
Q Consensus 362 ~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasilasl 419 (445)
..|+++||.+..+++.+++.+.|.. +|+. +..+.+..=+||+++|..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~---p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV--------EIKT---SPLAQYNGALGAALYAYK 256 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS--------CEEC---CGGGGGHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC--------CeEe---CCCcchHhHHHHHHHHHH
Confidence 6799999999999999999988843 2444 355667778899988854
No 40
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=43.47 E-value=1e+02 Score=28.10 Aligned_cols=49 Identities=14% Similarity=0.099 Sum_probs=37.6
Q ss_pred hccccCccCCeeeccceEEechhhhhhhc-------cCCceEEEEEcCCCceEEEEeecceecCc
Q 037470 145 AFSFWVCVCGILVFCPVIEFDALVLTSFA-------LGRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 145 ~eE~~~~~~~~~~~~p~v~~~~~~la~~~-------~g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+++.|+ +|.++.+..-+++++ .+..+.++|-+|.+ +-..-|.+|.++..
T Consensus 104 l~~~~~--------~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 104 IESALG--------IPFALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHC--------SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHhC--------CCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 337788 984488888888765 24578999999998 66777889988763
No 41
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=43.40 E-value=1.2e+02 Score=27.74 Aligned_cols=124 Identities=14% Similarity=0.069 Sum_probs=0.0
Q ss_pred cEEEeCCCceeEeeecCCCCCCcccCcceeeecCCCcccccccccCCCccccCCCccCCcCCCCCcceEeccccccCcCC
Q 037470 9 AIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDIDDSANAERNSGSAIDSKNNVDSNKGKGKRKLYVGTQSLGFRRD 88 (445)
Q Consensus 9 ~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 88 (445)
.+.||+|..++|++....+.-....
T Consensus 4 ~lgiDiGgt~i~~~l~d~~G~i~~~------------------------------------------------------- 28 (321)
T 3vgl_A 4 TIGVDIGGTKIAAGVVDEEGRILST------------------------------------------------------- 28 (321)
T ss_dssp EEEEEECSSEEEEEEECTTCCBCCC-------------------------------------------------------
T ss_pred EEEEEECCCEEEEEEECCCCCEEEE-------------------------------------------------------
Q ss_pred CeEEeccCCCCeecCHHHHHHHHHHHhccccCC-----------CCCCCcEEEecCCCCCHHHHHHHhccccCccCCeee
Q 037470 89 HMEVLSPLKDGVVVDWDIVDSIWDHAFRECLLI-----------DPKEHPMLLAEPSSNTQQQRESSAFSFWVCVCGILV 157 (445)
Q Consensus 89 ~~~~~~P~~~g~i~d~d~~e~i~~~~~~~~L~~-----------~~~~~~vll~ep~~~~~~~r~~~~eE~~~~~~~~~~ 157 (445)
...|...+.-.=++.+.++++.+. +...+ ++....+..+....+....-...+++.|+
T Consensus 29 ---~~~~~~~~~~~~~~~i~~~i~~~~-~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~------- 97 (321)
T 3vgl_A 29 ---FKVATPPTAEGIVDAICAAVAGAS-EGHDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVG------- 97 (321)
T ss_dssp ---EEEECCSSHHHHHHHHHHHHHHHH-TTCCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHHHC-------
T ss_pred ---EEeeCCCCHHHHHHHHHHHHHHHH-hhcCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC-------
Q ss_pred ccceE-Eechhhhhhhc-------cCCceEEEEEcCCCceEEEEeecceecC
Q 037470 158 FCPVI-EFDALVLTSFA-------LGRATSLVVDCGGGSTTVAPVHDGYVLQ 201 (445)
Q Consensus 158 ~~p~v-~~~~~~la~~~-------~g~~tglVVDiG~~~t~v~pV~~G~~~~ 201 (445)
+| + +.+.+-+++++ .+..+.++|-+|.+ .-..-|.+|.++.
T Consensus 98 -~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 98 -LP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp -SC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred -CC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
No 42
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=40.35 E-value=1.6e+02 Score=26.58 Aligned_cols=87 Identities=20% Similarity=0.111 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhccccCCCCCCC---cEEEecCCCCCHHHHHHHhcccc--CccCCeeeccceEEechhhhhhhcc-CCc
Q 037470 104 WDIVDSIWDHAFRECLLIDPKEH---PMLLAEPSSNTQQQRESSAFSFW--VCVCGILVFCPVIEFDALVLTSFAL-GRA 177 (445)
Q Consensus 104 ~d~~e~i~~~~~~~~L~~~~~~~---~vll~ep~~~~~~~r~~~~eE~~--~~~~~~~~~~p~v~~~~~~la~~~~-g~~ 177 (445)
|+.+...++.++ +..+.++.+- .+-+..|-......... +++.| + +|..+.+.+-+++++. +..
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~-l~~~~~~~--------~pv~v~NDa~aaa~ge~~~~ 122 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGE-FESQAPGF--------ARLSLATDGYTTLLGAHGGQ 122 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHH-HHHTCCCC--------SEEEEECHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHH-HHHhCCCC--------ceEEEECCHHHHHHhhcCCC
Confidence 455566666665 3334444432 36677776543332222 33445 6 7744899988888873 567
Q ss_pred eEEEEEcCCCceEEEEeecceec
Q 037470 178 TSLVVDCGGGSTTVAPVHDGYVL 200 (445)
Q Consensus 178 tglVVDiG~~~t~v~pV~~G~~~ 200 (445)
++++|-+|.+..-..-+.+|...
T Consensus 123 ~~v~v~~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 123 PGIIVALGTGSIGEALYPDGSHR 145 (305)
T ss_dssp SEEEEEESSSEEEEEECTTSCEE
T ss_pred CeEEEEecCCeEEEEEeCCCcEE
Confidence 88999999886433333478754
No 43
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=37.59 E-value=7.5 Score=36.44 Aligned_cols=49 Identities=10% Similarity=-0.070 Sum_probs=36.8
Q ss_pred hccccCccCCeeeccceEEechhhhhhhcc-------CCceEEEEEcCCCceEEEEeecceecCc
Q 037470 145 AFSFWVCVCGILVFCPVIEFDALVLTSFAL-------GRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 145 ~eE~~~~~~~~~~~~p~v~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+++.|+ +|..+.+.+-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 116 l~~~~~--------~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 116 LEAKIG--------RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHS--------SCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHC--------CCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 337889 9944888888887652 3478899999987 66777889988763
No 44
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=34.57 E-value=2.2e+02 Score=25.50 Aligned_cols=66 Identities=11% Similarity=0.008 Sum_probs=43.3
Q ss_pred cEEEecCCCCCHH--HHHHHhccccCccCCeeecc-ceE-Eechhhhhhhc-cCCceEEEEEcCCCceEEEEeecceec
Q 037470 127 PMLLAEPSSNTQQ--QRESSAFSFWVCVCGILVFC-PVI-EFDALVLTSFA-LGRATSLVVDCGGGSTTVAPVHDGYVL 200 (445)
Q Consensus 127 ~vll~ep~~~~~~--~r~~~~eE~~~~~~~~~~~~-p~v-~~~~~~la~~~-~g~~tglVVDiG~~~t~v~pV~~G~~~ 200 (445)
.+-+..|-..+.. .....+++.|+ + --+ +.+.+-+++++ .+..++++|=+|.+.--..-+.+|.+.
T Consensus 62 ~igig~pG~~~~~~~~l~~~l~~~~~--------~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCTPAKAPMLNEALDSMLP--------HCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCCTTTHHHHHHHHHHHST--------TCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCChHHHHHHHHHHHHhcC--------CCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 3666666654111 11122236677 6 236 99999999998 577888988898886555555688875
No 45
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=33.35 E-value=3.5 Score=37.88 Aligned_cols=47 Identities=17% Similarity=0.090 Sum_probs=37.3
Q ss_pred cccCccCCeeeccceEEechhhhhhhcc-----CCceEEEEEcCCCceEEEEeecceecCc
Q 037470 147 SFWVCVCGILVFCPVIEFDALVLTSFAL-----GRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 147 E~~~~~~~~~~~~p~v~~~~~~la~~~~-----g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+.|+ +|.++.+.+-+++++. +..+.++|-+|.+ +-..-|.+|.++..
T Consensus 92 ~~~~--------~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 92 SSYQ--------LPVHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp GGGC--------CCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHcC--------CCEEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 7788 9844889888888873 5678999999987 56777889988763
No 46
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=30.90 E-value=4 Score=37.38 Aligned_cols=47 Identities=13% Similarity=0.070 Sum_probs=36.1
Q ss_pred ccccCccCCeeeccceEEechhhhhhhcc-------CCceEEEEEcCCCceEEEEeecceecCc
Q 037470 146 FSFWVCVCGILVFCPVIEFDALVLTSFAL-------GRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 146 eE~~~~~~~~~~~~p~v~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
++.|+ +|.++.+++-+++++. +. +.++|.+|.+ +-..-|.+|.++..
T Consensus 93 ~~~~~--------~pv~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~G 146 (289)
T 2aa4_A 93 EQLTN--------LPTIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLTG 146 (289)
T ss_dssp HHHHC--------SCEEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHC--------CCEEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEeeC
Confidence 37788 9844888888887652 34 8999999988 67778889988763
No 47
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=30.43 E-value=6.6 Score=36.66 Aligned_cols=49 Identities=10% Similarity=0.013 Sum_probs=37.7
Q ss_pred hcccc-CccCCeeeccceEEechhhhhhhc-----c--CCceEEEEEcCCCceEEEEeecceecCc
Q 037470 145 AFSFW-VCVCGILVFCPVIEFDALVLTSFA-----L--GRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 145 ~eE~~-~~~~~~~~~~p~v~~~~~~la~~~-----~--g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+++.| + +|.++.+.+-+++++ . +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 113 l~~~~~~--------~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 113 LRSEFPH--------IHFKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHCTT--------SEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHcCC--------CCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 34778 8 985588888888655 2 4578999999987 77778889998873
No 48
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=29.48 E-value=11 Score=36.15 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=36.8
Q ss_pred hccccCccCCeeeccceEEechhhhhhhc-----cCCceEEEEEcCCCceEEEEeecceecCc
Q 037470 145 AFSFWVCVCGILVFCPVIEFDALVLTSFA-----LGRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 145 ~eE~~~~~~~~~~~~p~v~~~~~~la~~~-----~g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+++.|+ +|.++.+++-+++++ .++.+.++|-+|.+ +-..-|.+|.++..
T Consensus 184 l~~~~~--------~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 184 LKEKYG--------IEVWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHC--------SEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHhC--------CCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 337788 984488888888765 33378999999987 56777889988763
No 49
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=29.04 E-value=6.7 Score=36.52 Aligned_cols=68 Identities=24% Similarity=0.193 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHhCCHHhHHHHhcCccccCCCCc-hhhHHHHHHHHHhhhCCCCc--eEEEEecCCCCCccceeEeeeEEe
Q 037470 340 GLPQMVIDSINKCDVDIRRELFSSILLAGGTAS-MQQLKERLEKDLLEESPQAA--RVKVVSSGNATERRFSVWIGGSIL 416 (445)
Q Consensus 340 ~L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~-i~Gl~~RL~~eL~~~~p~~~--~v~v~~~~~~~~~~~~~W~Gasil 416 (445)
-|...|...+..++++ .|+|.||.+. .+-|.++|++.+.+...... +++|..+ .-...+.-+||+.+
T Consensus 249 ~L~~~i~~l~~~l~p~-------~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~---~~~~~a~~~GAa~l 318 (326)
T 2qm1_A 249 YLGLATGNLGNTLNPD-------SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLA---ELGNEAGVIGAASL 318 (326)
T ss_dssp HHHHHHHHHHHHHCCS-------EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEEC---SSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-------EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEc---CcCchHHHHHHHHH
Confidence 3555666666655553 4899999875 57788899988887754211 2344442 22334666787665
Q ss_pred e
Q 037470 417 A 417 (445)
Q Consensus 417 a 417 (445)
+
T Consensus 319 ~ 319 (326)
T 2qm1_A 319 A 319 (326)
T ss_dssp G
T ss_pred H
Confidence 4
No 50
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=28.62 E-value=7.1 Score=36.15 Aligned_cols=49 Identities=22% Similarity=0.131 Sum_probs=36.3
Q ss_pred hccccCccCCeeeccceEEechhhhhhhcc-------CCceEEEEEcCCCceEEEEeecceecCc
Q 037470 145 AFSFWVCVCGILVFCPVIEFDALVLTSFAL-------GRATSLVVDCGGGSTTVAPVHDGYVLQK 202 (445)
Q Consensus 145 ~eE~~~~~~~~~~~~p~v~~~~~~la~~~~-------g~~tglVVDiG~~~t~v~pV~~G~~~~~ 202 (445)
+++.|+ +|..+.+.+-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 94 l~~~~~--------~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 94 LEEATG--------RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHS--------SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHhhC--------CCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 337889 9955888887776542 3578899999987 56667779988764
No 51
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=27.94 E-value=19 Score=34.36 Aligned_cols=24 Identities=29% Similarity=0.372 Sum_probs=21.0
Q ss_pred cCccccCCCCchhhHHHHHHHHHh
Q 037470 362 SSILLAGGTASMQQLKERLEKDLL 385 (445)
Q Consensus 362 ~nIvLtGG~s~i~Gl~~RL~~eL~ 385 (445)
..|++|||++.=|-|-+||++.|.
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l~ 308 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLMP 308 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHCT
T ss_pred ceEEEECCccCcHHHHHHHHHhCC
Confidence 569999999999999999987763
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=27.39 E-value=38 Score=30.94 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhCCHHhHHHHhcCccccCCCCchhhHHHHHHHHHhhhCCCCceEEEEecCCCCCccceeEeeeEEee
Q 037470 341 LPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVVSSGNATERRFSVWIGGSILA 417 (445)
Q Consensus 341 L~~~I~~~i~~~~~d~r~~L~~nIvLtGG~s~i~Gl~~RL~~eL~~~~p~~~~v~v~~~~~~~~~~~~~W~Gasila 417 (445)
|...|.+.+..++++ .|||.||.+..+-|.++|++.+....... ++|..+ .-...+.-+||+.++
T Consensus 225 La~~i~~l~~~~~p~-------~IvlgGgi~~~~~~~~~l~~~l~~~~~~~--~~i~~s---~lg~~a~~~GAa~l~ 289 (297)
T 4htl_A 225 ICTGLYNLIYLFDPT-------HIFIGGGITSRPTFIAELKHHMESFGLRD--TIIETA---THKNQAGLLGAVYHF 289 (297)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGSTTHHHHHHHHHTTTCCTT--CEEEEC---SCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccccHHHHHHHHHHHHHhccCC--CeEEEC---CcCChHHHHhHHHHH
Confidence 445555555555553 48999999988889999999998765433 344442 223346667776544
No 53
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=24.23 E-value=52 Score=32.33 Aligned_cols=22 Identities=27% Similarity=0.226 Sum_probs=18.8
Q ss_pred ceEEEEEcCCCceEEEEeecce
Q 037470 177 ATSLVVDCGGGSTTVAPVHDGY 198 (445)
Q Consensus 177 ~tglVVDiG~~~t~v~pV~~G~ 198 (445)
.+..|+|+|.++|.|+-+.+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4689999999999999887664
No 54
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=24.03 E-value=1.2e+02 Score=27.31 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=34.4
Q ss_pred EEEEEcCCCceEEEEeecceecCccceEec-ccHHHHHHHHHHHHHhcCC
Q 037470 179 SLVVDCGGGSTTVAPVHDGYVLQKGVTTSP-IGGEFLTNCLMKSLESKGI 227 (445)
Q Consensus 179 glVVDiG~~~t~v~pV~~G~~~~~~~~~~~-~GG~~lt~~l~~~l~~~~~ 227 (445)
-|+||||-+.+....+.++.++.......+ ...+.+...|.+++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 489999999998888888877655322222 4466677777888876553
No 55
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=23.68 E-value=32 Score=32.13 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=23.9
Q ss_pred hcCccccCCCCchhhHHHHHHHHHhhh
Q 037470 361 FSSILLAGGTASMQQLKERLEKDLLEE 387 (445)
Q Consensus 361 ~~nIvLtGG~s~i~Gl~~RL~~eL~~~ 387 (445)
.++|+|+||.++=..+.++|.+.+...
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~ 271 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR 271 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc
Confidence 368999999999999999999998654
No 56
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=21.85 E-value=43 Score=31.38 Aligned_cols=27 Identities=30% Similarity=0.400 Sum_probs=23.9
Q ss_pred hcCccccCCCCchhhHHHHHHHHHhhh
Q 037470 361 FSSILLAGGTASMQQLKERLEKDLLEE 387 (445)
Q Consensus 361 ~~nIvLtGG~s~i~Gl~~RL~~eL~~~ 387 (445)
.++|+|+||.++=..|.++|.+++...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 378999999999999999999998754
No 57
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=21.28 E-value=29 Score=33.09 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=20.5
Q ss_pred cCccccCCCCchhhHHHHHHHHH
Q 037470 362 SSILLAGGTASMQQLKERLEKDL 384 (445)
Q Consensus 362 ~nIvLtGG~s~i~Gl~~RL~~eL 384 (445)
..|++|||++.=|-|-+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999998776
Done!