BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037472
(345 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQL--LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASE 111
LPP P LP+LGNL Q+ G+L S L E+YG + V G+ P +V+ + E
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 112 MIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD---------- 159
+ FS R K + + + + F N GE WR +R+ + +RD
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKY 216
+E L+ ++ S KG LL+ T + ++++NI+ V G++ D ++ +
Sbjct: 126 RIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDL 182
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
++ + ++F G+L G ++ + ++ + Q +E+H +
Sbjct: 183 FFQSFSLISSFSS-QVFELFS--GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATL-- 237
Query: 277 ESADVDDQSDKKDFVDV-LLHLWKD-SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
D S+ +DF+DV LL + KD S +E NL +L +F GT+TT TTL +
Sbjct: 238 ------DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 335 RAELVKNP 342
++K P
Sbjct: 292 FLLMLKYP 299
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQL--LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASE 111
LPP P LP+LGNL Q+ G+L S L E+YG + V G+ P +V+ + E
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 112 MIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD---------- 159
+ FS R K + + + + F N GE WR +R+ + +RD
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKY 216
+E L+ ++ S KG LL+ T + ++++NI+ V G++ D ++ +
Sbjct: 126 RIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDL 182
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
++ + ++F G+L G ++ + ++ + Q +E+H +
Sbjct: 183 FFQSFSLISSFSS-QVFELFS--GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL-- 237
Query: 277 ESADVDDQSDKKDFVDV-LLHLWKD-SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
D S+ +DF+DV LL + KD S +E NL +L +F GT+TT TTL +
Sbjct: 238 ------DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 335 RAELVKNP 342
++K P
Sbjct: 292 FLLMLKYP 299
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQL--LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASE 111
LPP P LP+LGNL Q+ G+L S L E+YG + V G+ P +V+ + E
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 112 MIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD---------- 159
+ FS R K + + + + F N GE WR +R+ + +RD
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKY 216
+E L+ ++ S KG LL+ T + ++++NI+ V G++ D ++ +
Sbjct: 126 RIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDL 182
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
++ + ++F G+L G ++ + ++ + Q +E+H +
Sbjct: 183 FFQSFSLISSFSS-QVFELFS--GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL-- 237
Query: 277 ESADVDDQSDKKDFVDV-LLHLWKD-SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
D S+ +DF+DV LL + KD S +E NL +L +F GT+TT TTL +
Sbjct: 238 ------DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 335 RAELVKNP 342
++K P
Sbjct: 292 FLLMLKYP 299
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQL--LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASE 111
LPP P LP+LGNL Q+ G+L S L E+YG + V G+ P +V+ + E
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 112 MIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD---------- 159
+ FS R K + + + + F N GE WR +R+ + +RD
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKY 216
+E L+ ++ S KG LL+ T + ++++NI+ V G++ D ++ +
Sbjct: 126 RIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDL 182
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
++ + ++F G+L G ++ + ++ + Q +E+H +
Sbjct: 183 FFQSFSLISSFSS-QVFELFS--GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL-- 237
Query: 277 ESADVDDQSDKKDFVDV-LLHLWKD-SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
D S+ +DF+DV LL + KD S +E NL +L +F GT+TT TTL +
Sbjct: 238 ------DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYG 291
Query: 335 RAELVKNP 342
++K P
Sbjct: 292 FLLMLKYP 299
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQL--LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASE 111
LPP P LP+LGNL Q+ G+L S L E+YG + V G+ P +V+ + E
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 112 MIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD---------- 159
+ FS R K + + + + F N GE WR +R+ + +RD
Sbjct: 68 ALVDQAEAFSGRGKIAVVDPIF-QGYGVIFAN-GERWRALRRFSLATMRDFGMGKRSVEE 125
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKY 216
+E L+ ++ S KG LL+ T + ++++NI+ V G++ D ++ +
Sbjct: 126 RIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDL 182
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
++ + ++F G+L G ++ + ++ + Q +E+H +
Sbjct: 183 FFQSFSLISSFSS-QVFELFS--GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATL-- 237
Query: 277 ESADVDDQSDKKDFVDV-LLHLWKD-SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
D S+ +DF+DV LL + KD S +E NL +L +F GT+TT TTL +
Sbjct: 238 ------DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYG 291
Query: 335 RAELVKNP 342
++K P
Sbjct: 292 FLLMLKYP 299
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 131/307 (42%), Gaps = 35/307 (11%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD------------ 159
FS R + + + + + F+N GE +Q+R+ I +RD
Sbjct: 70 VDQAEEFSGRGEQATFDWVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D +++
Sbjct: 128 QEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEF-------- 176
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRLNATARALDALLDQVIEEHINKVLSE 277
L F S G L ++ S ++ L + LL Q +E+ I K +
Sbjct: 177 -LSLLRMMLGIFQFTST--STGQLYEMFSSVMKHLPGPQQQAFQLL-QGLEDFIAKKVEH 232
Query: 278 SADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWAR 335
+ D + +DF+D L ++ TE NL L++F+GGT+T TTL +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGF 292
Query: 336 AELVKNP 342
L+K+P
Sbjct: 293 LLLMKHP 299
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 35/307 (11%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD------------ 159
FS R + + + + + F+N GE +Q+R+ I +RD
Sbjct: 70 VDQAEEFSGRGEQATFDWVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D +++
Sbjct: 128 QEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEF-------- 176
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRLNATARALDALLDQVIEEHINKVLSE 277
L F S G L ++ S ++ L + LL Q +E+ I K +
Sbjct: 177 -LSLLRMMLGIFQFTST--STGQLYEMFSSVMKHLPGPQQQAFQLL-QGLEDFIAKKVEH 232
Query: 278 SADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWAR 335
+ D + +DF+D L ++ TE NL L +F+GGT+T TTL +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGF 292
Query: 336 AELVKNP 342
L+K+P
Sbjct: 293 LLLMKHP 299
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 130/307 (42%), Gaps = 35/307 (11%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD------------ 159
FS R + + + + + F+N GE +Q+R+ I +RD
Sbjct: 70 VDQAEEFSGRGEQATFDWVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D +++
Sbjct: 128 QEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEF-------- 176
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRLNATARALDALLDQVIEEHINKVLSE 277
L F S G L ++ S ++ L + LL Q +E+ I K +
Sbjct: 177 -LSLLRMMLGIFQFTST--STGQLYEMFSSVMKHLPGPQQQAFQLL-QGLEDFIAKKVEH 232
Query: 278 SADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWAR 335
+ D + +DF+D L ++ TE NL L +F+GGT+T TTL +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGF 292
Query: 336 AELVKNP 342
L+K+P
Sbjct: 293 LLLMKHP 299
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 126/306 (41%), Gaps = 33/306 (10%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIR------------- 158
FS R + + L + +AF+N GE +Q+R+ I +R
Sbjct: 70 VDQAEEFSGRGEQATFDWLF-KGYGVAFSN-GERAKQLRRFSIATLRGFGVGKRGIEERI 127
Query: 159 DDEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D E++ +
Sbjct: 128 QEEAGFLIDALRGT---HGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLR--- 181
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSES 278
Q A G ++ + + L G + L L E+ I K + +
Sbjct: 182 -MMLGSFQFTATSTGQLYEMFSSV--MKHLPGPQQQAFKELQGL-----EDFIAKKVEHN 233
Query: 279 ADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWARA 336
D + +DF+D L ++ TE NL L++F GT+T TTL +
Sbjct: 234 QRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFL 293
Query: 337 ELVKNP 342
L+K+P
Sbjct: 294 LLMKHP 299
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 130/307 (42%), Gaps = 35/307 (11%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD------------ 159
FS R + + + + + F+N GE +Q+R+ I +RD
Sbjct: 70 VDQAEEFSGRGEQATFDWVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D +++
Sbjct: 128 QEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEF-------- 176
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRLNATARALDALLDQVIEEHINKVLSE 277
L +F S G L ++ S ++ L + LL Q +E+ I K +
Sbjct: 177 -LSLLRMMLGSFQFTST--STGQLYEMFSSVMKHLPGPQQQAFQLL-QGLEDFIAKKVEH 232
Query: 278 SADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWAR 335
+ D + +DF+D L ++ TE NL L++F GT+T TTL +
Sbjct: 233 NQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGF 292
Query: 336 AELVKNP 342
L+K+P
Sbjct: 293 LLLMKHP 299
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 35/282 (12%)
Query: 79 SLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIKTHDTVFSNRAKTTAANILLHECRD 138
S E+YG + V G P +++ VE E + FS R K +
Sbjct: 35 SFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFF-RGYG 93
Query: 139 IAFTNYGEYWRQVRK--ICHIRD-------------DEVSSLINKICHSCFNKGGLLNLT 183
+ F N G W+ +R+ + +RD +E LI ++ S KG L++ T
Sbjct: 94 VIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKS---KGALMDPT 149
Query: 184 EMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXXQLAAFCIGDMFPSL-GWL 242
+ +++ NI+ V G++ +++ K L + G +F G+L
Sbjct: 150 FLFQSITANIICSIVFGKRFHYQDQEFLKM----LNLFYQTFSLISSVFGQLFELFSGFL 205
Query: 243 DDLSGLIGRLNATARALDALLDQVIEEHINKVLSESADVDDQSDKKDFVDV-LLHLWKD- 300
G ++ + ++A + +E+H + D S +D +D LLH+ K+
Sbjct: 206 KHFPGAHRQVYKNLQEINAYIGHSVEKH--------RETLDPSAPRDLIDTYLLHMEKEK 257
Query: 301 SMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
S +E S NL L +F GT+TT TTL + ++K P
Sbjct: 258 SNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYP 299
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P LP +GN QL + SL +SERYGP+ + G +V+ + E +
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRD------------ 159
FS R + + + + + F+N GE +Q+R+ I +RD
Sbjct: 70 VDQAEEFSGRGEQATFDWVF-KGYGVVFSN-GERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E LI+ + + G ++ T L +N++S V G + D +++
Sbjct: 128 QEEAGFLIDALRGTG---GANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEF-------- 176
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRL-NATARALDALLDQVIEEHINKVLS 276
L F S G L ++ S ++ L +A L Q +E+ I K +
Sbjct: 177 -LSLLRMMLGIFQFTST--STGQLYEMFSSVMKHLPGPQQQAFQCL--QGLEDFIAKKVE 231
Query: 277 ESADVDDQSDKKDFVDVLLHLWKDSML--GTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
+ D + +DF+D L ++ TE NL L +F+GGT+T TTL +
Sbjct: 232 HNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYG 291
Query: 335 RAELVKNP 342
L+K+P
Sbjct: 292 FLLLMKHP 299
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 130/304 (42%), Gaps = 31/304 (10%)
Query: 55 LPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIK 114
LPP P LPI+GN+ Q+ S S+ YGP+ V FG +P +V E E +
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 115 THDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC------------HIRD--- 159
+ FS R + + + I+ + G+ W+++R+ I D
Sbjct: 71 DNGEEFSGRGNSPISQRITKGLGIIS--SNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQ 128
Query: 160 DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEEN-IGKSNKYGX 218
+E L+ ++ + K + T +L N++ V ++ D +++N + ++
Sbjct: 129 EEAHCLVEELRKT---KASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNE 185
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSES 278
C + FP L +D G ++ + + + ++EH S
Sbjct: 186 NFRILNSPWIQVC--NNFPLL--IDCFPGTHNKVLKNVALTRSYIREKVKEH-----QAS 236
Query: 279 ADVDDQSDKKDFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAEL 338
DV++ D D + + KD+ +E + +NL + D+F+ GT+TT TTL + L
Sbjct: 237 LDVNNPRDFIDCFLIKMEQEKDNQ-KSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLL 295
Query: 339 VKNP 342
+K+P
Sbjct: 296 LKHP 299
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 130/320 (40%), Gaps = 51/320 (15%)
Query: 53 LNLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEM 112
L PP P P+LG++ LG PH++L +S+RYG + + G++P LV+S ++ +
Sbjct: 15 LKSPPEPWGWPLLGHV-LTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 113 IKTHDTVFSNRAKTTAANILLHECRDIAF-TNYGEYWRQVRKI----------------- 154
+ F R + L+ + + + F T+ G W R++
Sbjct: 74 LVRQGDDFKGRPDLYTST-LITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASS 132
Query: 155 --CHIRD---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEE- 208
C++ + E +LI+++ G +++++V+N I + C + +E
Sbjct: 133 SSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEM 192
Query: 209 -NIGKSNKYGXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVI 267
++ K+ L D FP L +L + + + R A + L + +
Sbjct: 193 LSLVKNTHEFVETASSGNPL------DFFPILRYLPNPA--LQRFKAFNQRFLWFLQKTV 244
Query: 268 EEHINKVLSESADVDDQSDKKDFVDVLLHLWKDSMLGTELS-----QDNLKAIILDMFLG 322
+EH DK D+ L+K S G S Q+ + ++ D+F
Sbjct: 245 QEHYQDF-----------DKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGA 293
Query: 323 GTDTTVTTLEWARAELVKNP 342
G DT T + W+ LV P
Sbjct: 294 GFDTVTTAISWSLMYLVTKP 313
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 40/309 (12%)
Query: 54 NLPPSPPKLPILGNLHQL-LGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEM 112
LPP P LPI+GNL QL L +P S L++R+GP+ + G+ +V+ + E
Sbjct: 10 KLPPGPFPLPIIGNLFQLELKNIPK-SFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEA 68
Query: 113 IKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRK--ICHIRDDEVS-----SL 165
+ + FS R A + H R I F N G W+ +R+ + +R+ + S
Sbjct: 69 LLDYKDEFSGRGDLPAFHA--HRDRGIIFNN-GPTWKDIRRFSLTTLRNYGMGKQGNESR 125
Query: 166 INKICHSCF-----NKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGXXX 220
I + H +G + T ++ N+++ + + D +E +
Sbjct: 126 IQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLR-------- 177
Query: 221 XXXXXQLAAFCIGDMF-----PSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVL 275
+ + F P L ++ + L + R + + +V +E++++ +
Sbjct: 178 -------LMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEV-KEYVSERV 229
Query: 276 SESADVDDQSDKKDFVDVLL-HLWKDSMLGTEL-SQDNLKAIILDMFLGGTDTTVTTLEW 333
E D + +D D LL + K+ L + D + + D+F GT+TT TTL +
Sbjct: 230 KEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRY 289
Query: 334 ARAELVKNP 342
L+K P
Sbjct: 290 GLLILMKYP 298
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 41/308 (13%)
Query: 56 PPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIKT 115
PP P LP++GN+ Q+ SL LS+ YGP+ + FG P +V+ E E +
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 116 HDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC------------HIRD---D 160
FS R A + I F+N G+ W+++R+ I D +
Sbjct: 71 LGEEFSGRGIFPLAE-RANRGFGIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 161 EVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEEN----IGKSNKY 216
E L+ ++ + K + T +L N++ + ++ D +++ + K N+
Sbjct: 129 EARCLVEELRKT---KASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNEN 185
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLS 276
Q + + FP+L LD G +L + + + + ++EH
Sbjct: 186 IEILSSPWIQ-----VYNNFPAL--LDYFPGTHNKLLKNVAFMKSYILEKVKEH-----Q 233
Query: 277 ESADVDDQSDKKDFVD-VLLHLWKDSM-LGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
ES D++ + +DF+D L+ + K+ +E + ++L+ +D+F GT+TT TTL +A
Sbjct: 234 ESMDMN---NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYA 290
Query: 335 RAELVKNP 342
L+K+P
Sbjct: 291 LLLLLKHP 298
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 43/320 (13%)
Query: 50 SDHLNLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELA 109
S L PP P P++G++ LG PH++L +S++YG + + G++P +V+S ++
Sbjct: 7 SKGLKNPPGPWGWPLIGHM-LTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTI 65
Query: 110 SEMIKTHDTVFSNRAKTTAANILLHECRDIAFT-NYGEYWRQVRKI-------------- 154
+ + F R L+ + ++F+ + G W R++
Sbjct: 66 RQALVRQGDDFKGRPDLYTFT-LISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDP 124
Query: 155 -----CHIRD---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEE 206
C++ + E LI+ + G ++++V+N I + C GR+ D
Sbjct: 125 ASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAIC-FGRRYDHN 183
Query: 207 EENIGKSNKYGXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQV 266
+ + + + D P L +L + S LNA L++
Sbjct: 184 HQELLSLVNLNNNFGEV---VGSGNPADFIPILRYLPNPS-----LNAFKD-----LNEK 230
Query: 267 IEEHINKVLSESADVDDQSDKKDFVDVLLHLWKDSML----GTELSQDNLKAIILDMFLG 322
+ K++ E ++ +D D L+ ++ L +LS + + I+LD+F
Sbjct: 231 FYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGA 290
Query: 323 GTDTTVTTLEWARAELVKNP 342
G DT T + W+ LV NP
Sbjct: 291 GFDTVTTAISWSLMYLVMNP 310
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 34/305 (11%)
Query: 54 NLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMI 113
LPP P PI+GN+ Q+ SL SE YGP+ V G PT+V+ E E +
Sbjct: 10 KLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEAL 69
Query: 114 KTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC------------HIRD-- 159
F+ R + + IAF+N + W+++R+ I D
Sbjct: 70 VDLGEEFAGRGSVPILE-KVSKGLGIAFSN-AKTWKEMRRFSLMTLRNFGMGKRSIEDRI 127
Query: 160 -DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGX 218
+E L+ ++ + + T +L N++ + + D ++E K +
Sbjct: 128 QEEARCLVEELRKT---NASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLME-SL 183
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSES 278
+ + FP+L LD G+ L A + + + ++EH K+L
Sbjct: 184 HENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADYIKNFIMEKVKEH-QKLL--- 237
Query: 279 ADVDDQSDKKDFVD-VLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAE 337
D ++ +DF+D L+ + +++ L E + ++L + D+F GT+TT TTL ++
Sbjct: 238 ----DVNNPRDFIDCFLIKMEQENNL--EFTLESLVIAVSDLFGAGTETTSTTLRYSLLL 291
Query: 338 LVKNP 342
L+K+P
Sbjct: 292 LLKHP 296
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 35/306 (11%)
Query: 55 LPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIK 114
LPP P LP++GN+ Q+ SL LS+ YGP+ + FG +V+ E+ E +
Sbjct: 12 LPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALI 71
Query: 115 THDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC------------HIRD--- 159
FS R A + I F+N G+ W+++R+ I D
Sbjct: 72 DLGEEFSGRGHFPLAE-RANRGFGIVFSN-GKRWKEIRRFSLMTLRNFGMGKRSIEDRVQ 129
Query: 160 DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKAD-EEEENIGKSNKYGX 218
+E L+ ++ + K + T +L N++ + ++ D ++++ + K
Sbjct: 130 EEARCLVEELRKT---KASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNE 186
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSES 278
C + FP++ +D G +L +++ + + ++EH ES
Sbjct: 187 NIRIVSTPWIQIC--NNFPTI--IDYFPGTHNKLLKNLAFMESDILEKVKEH-----QES 237
Query: 279 ADVDDQSDKKDFVD-VLLHLWKDSM-LGTELSQDNLKAIILDMFLGGTDTTVTTLEWARA 336
D+++ +DF+D L+ + K+ +E + +NL D+ GT+TT TTL +A
Sbjct: 238 MDINN---PRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALL 294
Query: 337 ELVKNP 342
L+K+P
Sbjct: 295 LLLKHP 300
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 35/306 (11%)
Query: 55 LPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIK 114
LPP P LP++GN+ Q+ SL LS+ YGP+ + FG P +V+ E E +
Sbjct: 12 LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 71
Query: 115 THDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC------------HIRD--- 159
FS R A + I F+N G+ W+++R+ I D
Sbjct: 72 DLGEEFSGRGIFPLAE-RANRGFGIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQ 129
Query: 160 DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKAD-EEEENIGKSNKYGX 218
+E L+ ++ + K + T +L N++ + ++ D ++++ + K
Sbjct: 130 EEARCLVEELRKT---KASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNE 186
Query: 219 XXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSES 278
C + F + +D G +L + + + + ++EH ES
Sbjct: 187 NIKILSSPWIQIC--NNFSPI--IDYFPGTHNKLLKNVAFMKSYILEKVKEH-----QES 237
Query: 279 ADVDDQSDKKDFVD-VLLHLWKDSM-LGTELSQDNLKAIILDMFLGGTDTTVTTLEWARA 336
D++ + +DF+D L+ + K+ +E + ++L+ +D+F GT+TT TTL +A
Sbjct: 238 MDMN---NPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALL 294
Query: 337 ELVKNP 342
L+K+P
Sbjct: 295 LLLKHP 300
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 48/315 (15%)
Query: 56 PPSPPKLPILGNLHQLLGILP-----HISLKALSERYGPLTFVSFGNSPTLVVSSVELAS 110
P S LP++G+L LP H + L ++YGP+ V G T++V +LA
Sbjct: 10 PKSLLSLPLVGSL----PFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAK 65
Query: 111 EMIKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKIC----HIRDDEVSSLI 166
E++ FS R + +I + + IAF + G +W+ R++ + D L
Sbjct: 66 EVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLE 125
Query: 167 NKICHS--------CFNKGGLLNLT-EMLLAVSNNIVSRCV-IGRKADEEEENIGKSNKY 216
IC + G ++++ + +AV+N I C K + E N+ ++
Sbjct: 126 KIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNE 185
Query: 217 GXXXXXXXXQLAAFCIGDMFPSLGWLDDL-SGLIGRLNATARALDALLDQVIEEHINKVL 275
G L+ + D+ P WL + + +L + + + LL++++E + K
Sbjct: 186 G-----IIDNLSKDSLVDLVP---WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFR 237
Query: 276 SESADVDDQSDKKDFVDVLLHLWKDSMLGTE--------LSQDNLKAIILDMFLGGTDTT 327
S+S + +D L+ +S G LS +++ I D+F G +TT
Sbjct: 238 SDSI--------TNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETT 289
Query: 328 VTTLEWARAELVKNP 342
+ ++W A L+ NP
Sbjct: 290 TSVVKWTLAFLLHNP 304
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 123/300 (41%), Gaps = 27/300 (9%)
Query: 53 LNLPPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEM 112
L+LPP P G LH L LP I L +L+++ GP+ + G +V++S E
Sbjct: 28 LHLPPLVP-----GFLHLLQPNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEA 81
Query: 113 IKTHDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKICHIR---------DDEVS 163
+ F+ R + + ++ C+DI+ +Y W+ +K+ + V
Sbjct: 82 MIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVD 141
Query: 164 SLINKICHSC-FNKGGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXX 222
L + C G + + + ++ +I+ G K E+ + +
Sbjct: 142 QLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK----EDTLVHAFHDCVQDLM 197
Query: 223 XXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSESADVD 282
+ I DM P L + + + RL D ++++ + H ES
Sbjct: 198 KTWDHWSIQILDMVPFLRFFPNPG--LWRLKQAIENRDHMVEKQLRRH-----KESMVAG 250
Query: 283 DQSDKKDFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
D D++ + + +L + ++ ++D+F+GGT+TT +TL WA A L+ +P
Sbjct: 251 QWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHP 310
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 119/307 (38%), Gaps = 45/307 (14%)
Query: 56 PPSPPKLPILGNLHQLLGILPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIKT 115
PP P P++GN +G H+S L+ RYG + + G+ P +V++ + +
Sbjct: 11 PPGPFAWPLIGNA-AAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 116 HDTVFSNRAKTTAANILLHECRDIAFTNYGEYWRQVRKICH--IRD-------------- 159
+ F++R + A+ ++ R +AF +Y E+W+ R+ H +R+
Sbjct: 70 QGSAFADR-PSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 160 ---DEVSSLINKICHSCFNKGGLLNLTEMLLAVSNNIVSRCVIGRKAD----EEEENIGK 212
E L+ + + G L+ + + N++S G + E E +
Sbjct: 129 HVLSEARELVALLVRGSAD-GAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSH 187
Query: 213 SNKYGXXXXXXXXQLAAFCIGDMFPSLGWLDDLSGLIGRLNATARALDALLDQVIEEHIN 272
+ ++G + A + D+ P WL + + L+ I ++
Sbjct: 188 NEEFGRT-------VGAGSLVDVMP---WLQYFPNPVRTVFREFEQLNRNFSNFI---LD 234
Query: 273 KVLSESADVDDQSDKKDFVDVLLHLWKDSML------GTELSQDNLKAIILDMFLGGTDT 326
K L + + +D +D + + G L +N+ A I D+F DT
Sbjct: 235 KFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDT 294
Query: 327 TVTTLEW 333
T L+W
Sbjct: 295 LSTALQW 301
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 106/277 (38%), Gaps = 29/277 (10%)
Query: 83 LSERYGPLTFVSFGNSPTLVVSSVELASEMIKTHDTVFSNRAKTTAANILLHECRD--IA 140
L R+G + + +P +V++ + E + TH ++R IL R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 141 FTNYGEYWRQVRK--ICHIR---------DDEVSSLINKICHSCFNKGGLLNLTEMLL-- 187
YG WR+ R+ + +R + V+ +C + N G LL
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 188 AVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXXQLAAFCIGDMFPSLGWLDDLSG 247
AVSN I S GR+ + ++ + + ++ ++ L +
Sbjct: 159 AVSNVIAS-LTCGRRFEYDDPRFLRLLDLAQEGLKEESGF----LREVLNAVPVLLHIPA 213
Query: 248 LIGRLNATARALDALLDQVIEEHINKVLSESADVDDQSDKKDFVDVLLHLWKDSMLGTE- 306
L G++ +A LD+++ EH D +D + L + + E
Sbjct: 214 LAGKVLRFQKAFLTQLDELLTEH-------RMTWDPAQPPRDLTEAFLAEMEKAKGNPES 266
Query: 307 -LSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
+ +NL+ ++ D+F G TT TTL W ++ +P
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 50/286 (17%)
Query: 75 LPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIKTHDTVFSNRA------KTTA 128
LPH+ ++ S+ YG + + G T+V++ ++ E + +F++R K T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 129 ANILLHECRDIAFTNYGEYWRQVRKIC----HIRDDEVSSLINKICHSC--FN------K 176
LL+ + YG W R++ S +KI FN K
Sbjct: 95 MGGLLN-------SRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 177 GGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXXQLAAFCIGDMF 236
G + +++ +NI + + G + E+ + ++ +LAA ++
Sbjct: 148 GRPFDFKQLITNAVSNITNLIIFGERFTYEDTDF----QHMIELFSENVELAASASVFLY 203
Query: 237 PSLGWLDDLS-GLIGRLNATARALDALLDQVIEEHINKVLSESADVDDQSD-KKDFVDVL 294
+ W+ L G +L A + L ++IE+ A V+ + + FVD
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEK---------ASVNRKPQLPQHFVDAY 254
Query: 295 LHLWKDSM------LGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
L D M + S++NL + ++ + GT+TT L WA
Sbjct: 255 L----DEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWA 296
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 50/286 (17%)
Query: 75 LPHISLKALSERYGPLTFVSFGNSPTLVVSSVELASEMIKTHDTVFSNRA------KTTA 128
LPH+ ++ S+ YG + + G T+V++ ++ E + +F++R K T
Sbjct: 35 LPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTK 94
Query: 129 ANILLHECRDIAFTNYGEYWRQVRKIC----HIRDDEVSSLINKICHSC--FN------K 176
LL+ + YG W R++ S +KI FN K
Sbjct: 95 MGGLLN-------SRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 177 GGLLNLTEMLLAVSNNIVSRCVIGRKADEEEENIGKSNKYGXXXXXXXXQLAAFCIGDMF 236
G + +++ +NI + + G + E+ + ++ +LAA ++
Sbjct: 148 GRPFDFKQLITNAVSNITNLIIFGERFTYEDTDF----QHMIELFSENVELAASASVFLY 203
Query: 237 PSLGWLDDLS-GLIGRLNATARALDALLDQVIEEHINKVLSESADVDDQSD-KKDFVDVL 294
+ W+ L G +L A + L ++IE+ A V+ + + FVD
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEK---------ASVNRKPQLPQHFVDAY 254
Query: 295 LHLWKDSM------LGTELSQDNLKAIILDMFLGGTDTTVTTLEWA 334
L D M + S++NL + ++ + GT+TT L WA
Sbjct: 255 L----DEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWA 296
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 106/286 (37%), Gaps = 47/286 (16%)
Query: 83 LSERYGPLTFVSFGNSPTLVVSSVELASEMIKTHDTVFSNRAKTTAANILLHECRD--IA 140
L R+G + + +P +V++ + E + TH ++R IL R +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 141 FTNYGEYWRQVRK--ICHIR---------DDEVSSLINKICHSCFNKGGLLNLTEMLL-- 187
YG WR+ R+ + +R + V+ +C + N G LL
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 188 AVSNNIVSRCVIGRKADEEEENI---------GKSNKYGXXXXXXXXQLAAFCIGDMFPS 238
AVSN I S GR+ + ++ G + G L A + P+
Sbjct: 159 AVSNVIAS-LTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREV----LNAVPVDRHIPA 213
Query: 239 LGWLDDLSGLIGRLNATARALDALLDQVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW 298
L G++ +A LD+++ EH D +D + L
Sbjct: 214 LA---------GKVLRFQKAFLTQLDELLTEH-------RMTWDPAQPPRDLTEAFLAEM 257
Query: 299 KDSMLGTE--LSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
+ + E + +NL+ ++ D+F G TT TTL W ++ +P
Sbjct: 258 EKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 242 LDDLSGLIGRLNATARALDALLDQ------VIEEHINKVLSESADVDDQSDKKDFVDVLL 295
LD++ + R N A D Q V+ + ++K++++ +QSD D + +L
Sbjct: 182 LDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD--DLLTHML 239
Query: 296 HLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
H KD G L +N++ I+ + G +TT L +A LVKNP
Sbjct: 240 H-GKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNP 285
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 266 GHETTSGLLSFALYFLVKNP 285
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 266 GHETTSGLLSFALYFLVKNP 285
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 267
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 268 GHETTSGLLSFALYFLVKNP 287
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 267
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 268 GHETTSGLLSFALYFLVKNP 287
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 213 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 267
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 268 GHETTSGLLSFALYFLVKNP 287
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 266 GHETTSGLLSFALYFLVKNP 285
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 266 GHETTSGLLSFALYFLVKNP 285
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 289 DFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKN 341
D+ +L L DS ++S +++KA + +M GG DTT TL+W E+ +N
Sbjct: 257 DYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN 305
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 289 DFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKN 341
D+ +L L DS ++S +++KA + +M GG DTT TL+W E+ +N
Sbjct: 254 DYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN 302
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIK 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQ 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIE 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIH 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITELIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G ++T L +A LVKNP
Sbjct: 265 GHESTSGLLSFALYFLVKNP 284
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIC 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G ++T L +A LVKNP
Sbjct: 265 GHESTSGLLSFALYFLVKNP 284
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIM 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G +TT L +A LVKNP
Sbjct: 265 GHETTSGLLSFALYFLVKNP 284
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G ++T L +A LVKNP
Sbjct: 266 GHESTSGLLSFALYFLVKNP 285
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGT 324
+V+ + ++K++++ +QSD D + +LH KD G L +N++ I+ + G
Sbjct: 216 KVMNDLVDKIIADRKASGEQSD--DLLTHMLH-GKDPETGEPLDDENIRYQIVTFLIAGH 272
Query: 325 DTTVTTLEWARAELVKNP 342
+TT L + LVKNP
Sbjct: 273 ETTSGLLSFTLYFLVKNP 290
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 265 GHEATSGLLSFALYFLVKNP 284
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 265 GHEATSGLLSFALYFLVKNP 284
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 265 GHEATSGLLSFALYFLVKNP 284
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+ +
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLIA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 265 GHENTSGLLSFALYFLVKNP 284
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAA 264
Query: 323 GTDTTVTTLEWARAELVKNPTSM 345
G + T L +A LVKNP +
Sbjct: 265 GHEATSGLLSFALYFLVKNPHEL 287
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAA 265
Query: 323 GTDTTVTTLEWARAELVKNPTSM 345
G + T L +A LVKNP +
Sbjct: 266 GHEATSGLLSFALYFLVKNPHEL 288
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+
Sbjct: 210 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAA 264
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 265 GHEATSGLLSFALYFLVKNP 284
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 265 QVIEEHINKVLSESADVDDQSDKKDFVDVLLHLW--KDSMLGTELSQDNLKAIILDMFLG 322
+V+ + ++K++++ +QSD D+L H+ KD G L +N++ I+
Sbjct: 211 KVMNDLVDKIIADRKASGEQSD-----DLLTHMLNGKDPETGEPLDDENIRYQIITFLAA 265
Query: 323 GTDTTVTTLEWARAELVKNP 342
G + T L +A LVKNP
Sbjct: 266 GHEATSGLLSFALYFLVKNP 285
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 253 NATARALDALLDQVIEEHINKVLSESAD--------VDDQSDKKDFVDVLLHLWKDSMLG 304
+ATARAL L ++E +++ + +D++ DVL L + G
Sbjct: 177 SATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADG 236
Query: 305 TELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNPTSM 345
+ LS L A++ + GTDTT+ + +A L+++P ++
Sbjct: 237 SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEAL 277
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 253 NATARALDALLDQVIEEHINKVLSESAD--------VDDQSDKKDFVDVLLHLWKDSMLG 304
+ATARAL L ++E +++ + +D++ DVL L + G
Sbjct: 177 SATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADG 236
Query: 305 TELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNPTSM 345
+ LS L A++ + GTDTT+ + +A L+++P ++
Sbjct: 237 SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEAL 277
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 242 LDDLSGLIGRLNATARALDALLDQ------VIEEHINKVLSESADVDDQSDKKDFVDVLL 295
LD++ + R N A D Q V+ + ++K++++ +QSD D + +L
Sbjct: 181 LDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD--DLLTQML 238
Query: 296 HLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELVKNP 342
+ KD G L N+ I+ + G +TT L +A LVKNP
Sbjct: 239 N-GKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNP 284
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 280 DVDDQSDKKDFVDVLLHLWKDSMLGTELSQDNLKAIILDMFLGGTDTTVTTLEWARAELV 339
D+ +++ +++ +L L K + E ++KA I +M GG +TT TL+W E+
Sbjct: 249 DLRRKTEFRNYPGILYCLLKSEKMLLE----DVKANITEMLAGGVNTTSMTLQWHLYEMA 304
Query: 340 KN 341
++
Sbjct: 305 RS 306
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,368,423
Number of Sequences: 62578
Number of extensions: 294844
Number of successful extensions: 850
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 726
Number of HSP's gapped (non-prelim): 100
length of query: 345
length of database: 14,973,337
effective HSP length: 100
effective length of query: 245
effective length of database: 8,715,537
effective search space: 2135306565
effective search space used: 2135306565
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)