BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037474
(517 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YIJ|A Chain A, Crystal Structure Of Phospholipase A1
pdb|2YIJ|B Chain B, Crystal Structure Of Phospholipase A1
Length = 419
Score = 257 bits (657), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 224/415 (53%), Gaps = 40/415 (9%)
Query: 98 ISDKWREIHGCTDWDSLLDPLHPCLRREILKYGEFAQATYDAFDFDRFSEYCGSCRFNSN 157
+ +WR++ G W L PL LR I+ YGE AQA YD F+ + S++ G+ ++
Sbjct: 19 FAKRWRDLSGQNHWKGXLQPLDQDLREYIIHYGEXAQAGYDTFNINTESQFAGASIYSRK 78
Query: 158 KIFEKLGLDGKH---GYKVCKYIYAMSHIDMPQWLNRTVHLGDTWSRDSNWMGFVAISDE 214
F K+GL+ H YKV K+IYA S I +P+ + WS++SNW G+VA++D+
Sbjct: 79 DFFAKVGLEIAHPYTKYKVTKFIYATSDIHVPESFLLFPISREGWSKESNWXGYVAVTDD 138
Query: 215 EETHRIGRRDIVVAWRGTVAPSEWYEDFQ----RKLEPIGP-GDDAKVEHGFHSIYTSKS 269
+ T +GRRDIVV+WRG+V P EW EDF+ ++ G D ++ G++SIY S+
Sbjct: 139 QGTALLGRRDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQVQIHQGWYSIYXSQD 198
Query: 270 EHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALL-------NAYEA 322
E + ++K++A +QV++EV RL++ YK+ EEVS+TI GHSLG ALA L N Y
Sbjct: 199 ERSPFTKTNARDQVLREVGRLLEKYKD--EEVSITICGHSLGAALATLSATDIVANGYNR 256
Query: 323 ATTIP--GLPISVISFGAPRVGNIAFRDQLHQM-GVKTLRVVVKQDLVPKMPGVVFNEGL 379
+ P P++ F +PRVG+ FR + ++ LR D++P P + ++E
Sbjct: 257 PKSRPDKSCPVTAFVFASPRVGDSDFRKLFSGLEDIRVLRTRNLPDVIPIYPPIGYSE-- 314
Query: 380 QKFDEITGTLDWVYTHVGAELRLDVRSSPYLKHGFNLLGFHSQETYLHLVDGF--VCQSS 437
VG E +D R SPY K NL FH E YLH V G ++
Sbjct: 315 ----------------VGDEFPIDTRKSPYXKSPGNLATFHCLEGYLHGVAGTQGTNKAD 358
Query: 438 SFREDARRDVALVNKACDMLVDELRIPHCWYQMENKGLVRNAHGRWVKPKREAED 492
FR D R + LVNK+ D L DE +P W ++NKG + G W E +D
Sbjct: 359 LFRLDVERAIGLVNKSVDGLKDECXVPGKWRVLKNKGXAQQDDGSWELVDHEIDD 413
>pdb|1TIC|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1TIC|B Chain B, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|1LGY|A Chain A, Lipase Ii From Rhizopus Niveus
pdb|1LGY|B Chain B, Lipase Ii From Rhizopus Niveus
pdb|1LGY|C Chain C, Lipase Ii From Rhizopus Niveus
Length = 269
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 203 SNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFH 262
S+ G+V SD+++T I + +RGT + D P AKV GF
Sbjct: 61 SDTNGYVLRSDKQKT-------IYLVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFL 113
Query: 263 SIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEA 322
S Y EQV+ + +V+ + +TGHSLGGA ALL +
Sbjct: 114 SSY---------------EQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDL 158
Query: 323 ATTIPGLP---ISVISFGAPRVGNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
P L +S+ + G PRVGN F + G+ R V K+D+VP +P
Sbjct: 159 YQREPRLSPKNLSIFTVGGPRVGNPTFAYYVESTGIPFQRTVHKRDIVPHVP 210
>pdb|1TGL|A Chain A, A Serine Protease Triad Forms The Catalytic Centre Of A
Triacylglycerol Lipase
Length = 269
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 198 TWSR---DSNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDD 254
TWS D+N M VA D E+T I + +RG+ + W D P
Sbjct: 54 TWSTLIYDTNAM--VARGDSEKT-------IYIVFRGSSSIRNWIADLTFVPVSYPPVSG 104
Query: 255 AKVEHGFHSIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGAL 314
KV GF Y +V E+ V ++ + +TGHSLGGA
Sbjct: 105 TKVHKGFLDSY---------------GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGAT 149
Query: 315 ALLNAYEAATTIPGLPIS---VISFGAPRVGNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
ALL A + GL S + + G PRVGN AF + + G+ R V ++D+VP +P
Sbjct: 150 ALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
Query: 372 GVVF 375
F
Sbjct: 210 PAAF 213
>pdb|4TGL|A Chain A, Catalysis At The Interface: The Anatomy Of A
Conformational Change In A Triglyceride Lipase
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 198 TWSR---DSNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDD 254
TWS D+N M VA D E+T I + +RG+ + W D P
Sbjct: 54 TWSTLIYDTNAM--VARGDSEKT-------IYIVFRGSSSIRNWIADLTFVPVSYPPVSG 104
Query: 255 AKVEHGFHSIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGAL 314
KV GF Y +V E+ V ++ + +TGHSLGGA
Sbjct: 105 TKVHKGFLDSY---------------GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGAT 149
Query: 315 ALLNAYEAATTIPGLPIS---VISFGAPRVGNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
ALL A + GL S + + G PRVGN AF + + G+ R V ++D+VP +P
Sbjct: 150 ALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
Query: 372 GVVF 375
F
Sbjct: 210 PAAF 213
>pdb|5TGL|A Chain A, A Model For Interfacial Activation In Lipases From The
Structure Of A Fungal Lipase-Inhibitor Complex
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 198 TWSR---DSNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDD 254
TWS D+N M VA D E+T I + +RG+ + W D P
Sbjct: 54 TWSTLIYDTNAM--VARGDSEKT-------IYIVFRGSSSIRNWIADLTFVPVSYPPVSG 104
Query: 255 AKVEHGFHSIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGAL 314
KV GF Y +V E+ V ++ + +TGHSLGGA
Sbjct: 105 TKVHKGFLDSY---------------GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGAT 149
Query: 315 ALLNAYEAATTIPGLPIS---VISFGAPRVGNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
ALL A + GL S + + G PRVGN AF + + G+ R V ++D+VP +P
Sbjct: 150 ALLCALDLYQREEGLSSSNLFLYTQGQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLP 209
Query: 372 GVVF 375
F
Sbjct: 210 PAAF 213
>pdb|1DT3|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT3|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|E Chain E, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|F Chain F, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|G Chain G, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DT5|H Chain H, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DTE|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1DU4|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1DU4|D Chain D, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase Other Structure
Details
pdb|1EIN|A Chain A, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|B Chain B, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1EIN|C Chain C, The Structural Origins Of Interfacial Activation In
Thermomyces (Humicola) Lanuginosa Lipase
pdb|1TIB|A Chain A, Conformational Lability Of Lipases Observed In The Absence
Of An Oil-Water Interface: Crystallographic Studies Of
Enzymes From The Fungi Humicola Lanuginosa And Rhizopus
Delemar
pdb|4DYH|A Chain A, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4DYH|B Chain B, Crystal Structure Of Glycosylated Lipase From Humicola
Lanuginosa At 2 Angstrom Resolution
pdb|4EA6|A Chain A, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4EA6|B Chain B, Crystal Structure Of Fungal Lipase From
Thermomyces(Humicola) Lanuginosa At 2.30 Angstrom
Resolution.
pdb|4FLF|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4FLF|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.15a Resolution.
pdb|4GBG|A Chain A, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GBG|B Chain B, Crystal Structure Of Ethyl Acetoacetate Treated Lipase
From Thermomyces Lanuginosa At 2.9 A Resolution
pdb|4GI1|A Chain A, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GI1|B Chain B, Structure Of The Complex Of Three Phase Partition Treated
Lipase From Thermomyces Lanuginosa With
16-Hydroxypalmitic Acid At 2.4 A Resolution
pdb|4GLB|A Chain A, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GLB|B Chain B, Structure Of P-Nitrobenzaldehyde Inhibited Lipase From
Thermomyces Lanuginosa At 2.69 A Resolution
pdb|4GWL|A Chain A, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GWL|B Chain B, Structure Of Three Phase Partition Treated Lipase From
Thermomyces Lanuginosa At 2.55a Resolution
pdb|4GHW|A Chain A, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
pdb|4GHW|B Chain B, Crystal Structure Of The Complex Of Fungal Lipase From
Thermomyces Lanuginosa With Decanoic Acid At 2.6 A
Resolution
Length = 269
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 207 GFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFHSIYT 266
GF+A+ + T+++ IV+++RG+ + W + L+ I + I +
Sbjct: 65 GFLAL---DNTNKL----IVLSFRGSRSIENWIGNLNFDLKEI------------NDICS 105
Query: 267 SKSEHTRYSKS--SASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAAT 324
H ++ S S ++ + ++V V+ + + + TGHSLGGALA + +
Sbjct: 106 GCRGHDGFTSSWRSVADTLRQKVEDAVREHPD----YRVVFTGHSLGGALATVAGADLRG 161
Query: 325 TIPGLPISVISFGAPRVGNIAFRDQLH-QMGVKTLRVVVKQDLVPKMP 371
G I V S+GAPRVGN AF + L Q G R+ D+VP++P
Sbjct: 162 N--GYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLP 207
>pdb|3TGL|A Chain A, Structure And Molecular Model Refinement Of Rhizomucor
Miehei Triacylglyceride Lipase: A Case Study Of The Use
Of Simulated Annealing In Partial Model Refinement
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 77/184 (41%), Gaps = 30/184 (16%)
Query: 198 TWSR---DSNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDD 254
TWS D+N M VA D E+T I + +RG+ + W D P
Sbjct: 54 TWSTLIYDTNAM--VARGDSEKT-------IYIVFRGSSSIRNWIADLTFVPVSYPPVSG 104
Query: 255 AKVEHGFHSIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGAL 314
KV GF Y +V E+ V ++ + +TGHSLGGA
Sbjct: 105 TKVHKGFLDSY---------------GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGAT 149
Query: 315 ALLNAYEAATTIPGLPIS---VISFGAPRVGNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
LL A + GL S + + G PRVG+ AF + + G+ R V ++D+VP +P
Sbjct: 150 VLLCALDLYQREEGLSSSNLFLYTQGQPRVGDPAFANYVVSTGIPYRRTVNERDIVPHLP 209
Query: 372 GVVF 375
F
Sbjct: 210 PAAF 213
>pdb|1GT6|A Chain A, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
pdb|1GT6|B Chain B, S146a Mutant Of Thermomyces (Humicola) Lanuginosa Lipase
Complex With Oleic Acid
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 207 GFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFHSIYT 266
GF+A+ + T+++ IV+++RG+ + W + L+ I + I +
Sbjct: 65 GFLAL---DNTNKL----IVLSFRGSRSIENWIGNLNFDLKEI------------NDICS 105
Query: 267 SKSEHTRYSKS--SASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAAT 324
H ++ S S ++ + ++V V+ + + + TGH+LGGALA + +
Sbjct: 106 GCRGHDGFTSSWRSVADTLRQKVEDAVREHPD----YRVVFTGHALGGALATVAGADLRG 161
Query: 325 TIPGLPISVISFGAPRVGNIAFRDQLH-QMGVKTLRVVVKQDLVPKMP 371
G I V S+GAPRVGN AF + L Q G R+ D+VP++P
Sbjct: 162 N--GYDIDVFSYGAPRVGNRAFAEFLTVQTGGTLYRITHTNDIVPRLP 207
>pdb|3NGM|A Chain A, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|B Chain B, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|C Chain C, Crystal Structure Of Lipase From Gibberella Zeae
pdb|3NGM|D Chain D, Crystal Structure Of Lipase From Gibberella Zeae
Length = 319
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 222 RRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFHSIYTSKSEHTRYSKSSASE 281
R++IVV++RG++ W + + V GF + +
Sbjct: 72 RKEIVVSFRGSINIRNWLTNLDFDQDDCSLTSGCGVHSGFQNAW---------------N 116
Query: 282 QVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAPRV 341
++ T V ++ + GHSLGGA+A L A I G P+ + ++G+PRV
Sbjct: 117 EISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAG--ANLRIGGTPLDIYTYGSPRV 174
Query: 342 GNIAFRDQLHQMGVKTLRVVVKQDLVPKMPGVVF 375
GN + RV +D VP++P ++F
Sbjct: 175 GNTQLAAFVSNQAGGEFRVTNAKDPVPRLPPLIF 208
>pdb|1USW|A Chain A, Crystal Structure Of Ferulic Acid Esterase From
Aspergillus Niger
Length = 260
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 223 RDIVVAWRGTVAPSEWYEDFQRKLEPIGP---GDDAKVEHGFHSIYTSKSEHTRYSKSSA 279
++I+ +RGT + + D L P +D +V G++ + S
Sbjct: 59 KEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS------------ 106
Query: 280 SEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAP 339
V +V LVK + + +LT+TGHSLG ++A L A + + T + + +FG P
Sbjct: 107 ---VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEP 161
Query: 340 RVGNIAFRDQLHQM-------GVKTLRVVVKQDLVPKMP 371
R GN AF ++ + RV D +P +P
Sbjct: 162 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2HL6|A Chain A, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2HL6|B Chain B, Structure Of Homologously Expressed Ferrulate Esterase Of
Aspergillus Niger In Complex With Caps
pdb|2IX9|A Chain A, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
pdb|2IX9|B Chain B, Respective Role Of Protein Folding And Glycosylation In
The Thermal Stability Of Recombinant Feruloyl Esterase A
Length = 260
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 223 RDIVVAWRGTVAPSEWYEDFQRKLEPIGP---GDDAKVEHGFHSIYTSKSEHTRYSKSSA 279
++I+ +RGT + + D L P +D +V G++ + S
Sbjct: 59 KEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS------------ 106
Query: 280 SEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAP 339
V +V LVK + + +LT+TGHSLG ++A L A + + T + + +FG P
Sbjct: 107 ---VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEP 161
Query: 340 RVGNIAFRDQLHQM-------GVKTLRVVVKQDLVPKMP 371
R GN AF ++ + RV D +P +P
Sbjct: 162 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|1UWC|A Chain A, Feruloyl Esterase From Aspergillus Niger
pdb|1UWC|B Chain B, Feruloyl Esterase From Aspergillus Niger
pdb|1UZA|A Chain A, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
pdb|1UZA|B Chain B, Crystallographic Structure Of A Feruloyl Esterase From
Aspergillus Niger
Length = 261
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 223 RDIVVAWRGTVAPSEWYEDFQRKLEPIGP---GDDAKVEHGFHSIYTSKSEHTRYSKSSA 279
++I+ +RGT + + D L P +D +V G++ + S
Sbjct: 59 KEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS------------ 106
Query: 280 SEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAP 339
V +V LVK + + +LT+TGHSLG ++A L A + + T + + +FG P
Sbjct: 107 ---VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEP 161
Query: 340 RVGNIAFRDQLHQM-------GVKTLRVVVKQDLVPKMP 371
R GN AF ++ + RV D +P +P
Sbjct: 162 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|2BJH|A Chain A, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|B Chain B, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
pdb|2BJH|C Chain C, Crystal Structure Of S133a Anfaea-Ferulic Acid Complex
Length = 260
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 27/159 (16%)
Query: 223 RDIVVAWRGTVAPSEWYEDFQRKLEPIGP---GDDAKVEHGFHSIYTSKSEHTRYSKSSA 279
++I+ +RGT + + D L P +D +V G++ + S
Sbjct: 59 KEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS------------ 106
Query: 280 SEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAP 339
V +V LVK + + +LT+TGH+LG ++A L A + + T + + +FG P
Sbjct: 107 ---VQDQVESLVKQQASQYPDYALTVTGHALGASMAALTAAQLSATYDN--VRLYTFGEP 161
Query: 340 RVGNIAFRDQLHQM-------GVKTLRVVVKQDLVPKMP 371
R GN AF ++ + RV D +P +P
Sbjct: 162 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 200
>pdb|1TIA|A Chain A, An Unusual Buried Polar Cluster In A Family Of Fungal
Lipases
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 225 IVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFHSIYTSKSEHTRYSKSSASEQVM 284
+V+A+RG+ + W D G D E GF S S + ++
Sbjct: 76 VVLAFRGSYSVRNWVADATFVHTNPGLCDGCLAELGFWS-----------SWKLVRDDII 124
Query: 285 KEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTI--PGLPIS-VISFGAPRV 341
KE+ +V + L + GHSLG A+A L AAT + G P + + ++ +PRV
Sbjct: 125 KELKEVVA----QNPNYELVVVGHSLGAAVATL----AATDLRGKGYPSAKLYAYASPRV 176
Query: 342 GNIAFRDQLHQMGVKTLRVVVKQDLVPKMP 371
GN A + G R D VPK+P
Sbjct: 177 GNAALAKYITAQG-NNFRFTHTNDPVPKLP 205
>pdb|3UUF|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 278
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 265 YTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAAT 324
Y K + A +M ++ VK YK++ E +T+ GHSLG A+ LL A +
Sbjct: 101 YYPKGTKLMHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIEL 160
Query: 325 TIPGLPISVISFGAPRVGNIAFRDQLHQ-MGVKTLRVVVKQDLVPKMP 371
+ G FG PR+GN F + Q +G K ++ +D VP +P
Sbjct: 161 RMDGGLYKTYLFGLPRLGNPTFASFVDQKIGDKFHSIINGRDWVPTVP 208
>pdb|3UUE|A Chain A, Crystal Structure Of Mono- And Diacylglycerol Lipase From
Malassezia Globosa
Length = 279
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 265 YTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAAT 324
Y K + A +M ++ VK YK++ E +T+ GHSLG A+ LL A +
Sbjct: 102 YYPKGTKLMHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIEL 161
Query: 325 TIPGLPISVISFGAPRVGNIAFRDQLHQ-MGVKTLRVVVKQDLVPKMP 371
+ G FG PR+GN F + Q +G K ++ +D VP +P
Sbjct: 162 RMDGGLYKTYLFGLPRLGNPTFASFVDQKIGDKFHSIINGRDWVPTVP 209
>pdb|3O0D|A Chain A, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|B Chain B, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|C Chain C, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|D Chain D, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|E Chain E, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|F Chain F, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
pdb|3O0D|G Chain G, Crystal Structure Of Lip2 Lipase From Yarrowia Lipolytica
At 1.7 A Resolution
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 34/169 (20%)
Query: 217 THRIGRRDIVVAWRGTVAPSEWYEDFQRKLEPIGPGDDAKVEHGFHSIYTSKSEHTRYSK 276
TH + D++ R AP + D + DD V +GF Y
Sbjct: 88 THSL--EDVITDIRIMQAPLTNF-DLAANISSTATCDDCLVHNGFIQSY----------- 133
Query: 277 SSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISF 336
++ Q+ ++ +++ Y + + +TGHSLGGA ALL + + G V++
Sbjct: 134 NNTYNQIGPKLDSVIEQYPDY----QIAVTGHSLGGAAALL--FGINLKVNGHDPLVVTL 187
Query: 337 GAPRVGNIAFRDQLHQMGV--------------KTLRVVVKQDLVPKMP 371
G P VGN F + + ++ K R+ + D+VP++P
Sbjct: 188 GQPIVGNAGFANWVDKLFFGQENPDVSKVSKDRKLYRITHRGDIVPQVP 236
>pdb|2ORY|A Chain A, Crystal Structure Of M37 Lipase
pdb|2ORY|B Chain B, Crystal Structure Of M37 Lipase
Length = 346
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 65/160 (40%), Gaps = 23/160 (14%)
Query: 226 VVAWRGT--VAPSEW-YEDFQRKLEPIGPGDDAKVEHGFHSIYTSKSEHTRYS-----KS 277
V+A RGT V+ S+W + DF P A VE I SE T Y K
Sbjct: 86 VIAIRGTNPVSISDWLFNDFMVSAMKKWP--YASVEGRILKI----SESTSYGLKTLQKL 139
Query: 278 SASEQVMKEVTRLVKLYKEK-GEE--VSLTITGHSLGGALA-----LLNAYEAATTIPGL 329
+ E +++ EK G E + +TGHS GGAL+ L + +
Sbjct: 140 KPKSHIPGENKTILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDIQGVKLSQNI 199
Query: 330 PISVISFGAPRVGNIAFRDQLHQ-MGVKTLRVVVKQDLVP 368
IS I F P GN F D +G + R+ D+VP
Sbjct: 200 DISTIPFAGPTAGNADFADYFDDCLGDQCTRIANSLDIVP 239
>pdb|3G7N|A Chain A, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
pdb|3G7N|B Chain B, Crystal Structure Of A Triacylglycerol Lipase From
Penicillium Expansum At 1.3
Length = 258
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 29/152 (19%)
Query: 202 DSNWMGFVAISDEEETHRIGRRDIVVAWRGTVAPSEWYEDF-----QRKLEPIGPGDDAK 256
D+N GFV S E++T I V RG+ +++ D +L + D K
Sbjct: 44 DTN--GFVGYSTEKKT-------IAVIMRGSTTITDFVNDIDIALITPELSGVTFPSDVK 94
Query: 257 VEHGFHSIYTSKSEHTRYSKSSASEQVMKEVTRLVKLYKEKGEEVSLTITGHSLGGALAL 316
+ G H + S+ + ++ EV L+ Y + +L GHSLGGAL
Sbjct: 95 IMRGVHRPW-----------SAVHDTIITEVKALIAKY----PDYTLEAVGHSLGGALTS 139
Query: 317 LNAYEAATTIPGLPISVISFGAPRVGNIAFRD 348
+ A P + + A +GN A+ D
Sbjct: 140 IAHVALAQNFPDKSLVSNALNAFPIGNQAWAD 171
>pdb|1FSH|A Chain A, Structural Basis Of The Recognition Of The Dishevelled Dep
Domain In The Wnt Signaling Pathway
Length = 105
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 388 TLDWVYTHV-GAELRLDVR--SSPYLKHGF-----NLLGFHSQETYL 426
+DW+YTHV G + R + R +S LKHGF N + F Q Y+
Sbjct: 56 VVDWLYTHVEGFKERREARKYASSMLKHGFLRHTVNKITFSEQCYYV 102
>pdb|1P31|A Chain A, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) From Haemophilus Influenzae
pdb|1P31|B Chain B, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) From Haemophilus Influenzae
pdb|1P3D|A Chain A, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) In Complex With Uma And Anp.
pdb|1P3D|B Chain B, Crystal Structure Of Udp-N-Acetylmuramic Acid:l-Alanine
Ligase (Murc) In Complex With Uma And Anp
Length = 475
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 108 CTDWDSLLDPLHPCLRREILKYGEFAQATYDAFDFDR--FSEYCGSCRFNSNKIFEKLGL 165
C D D +L L P + R+++ YG QA Y D+++ F + N+ +I L +
Sbjct: 229 CAD-DPVLXELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERINVLLNV 287
Query: 166 DGKH 169
GKH
Sbjct: 288 PGKH 291
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 287 VTRLVKLYKEKGEEVSLTITGHSLGGALALLNAYEAATTIPGLPISVISFGAPRVGN 343
+T L+ +K ++ S+T+ G+S+GG +AL A I L + S G N
Sbjct: 69 ITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEAN 125
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,733,626
Number of Sequences: 62578
Number of extensions: 720636
Number of successful extensions: 1948
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1909
Number of HSP's gapped (non-prelim): 23
length of query: 517
length of database: 14,973,337
effective HSP length: 103
effective length of query: 414
effective length of database: 8,527,803
effective search space: 3530510442
effective search space used: 3530510442
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)